AlfalfaGEDB | Msa0026280

M. sativa cultivar zhongmu-4 / Msa0026280

KEGG: -
GO: GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0001190 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006325 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0007623 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0032922 GO:0033993 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0042493 GO:0042752 GO:0042753 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043565 GO:0043966 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097305 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0026280	XP_024634476.1	96.309	298	5	1	1	292	1	298	0.0	594

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0026280	sp\|Q8RWU3\|RVE8_ARATH	67.050	261	73	4	21	269	17	276	8.90e-123	355

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0026280	A0A072VW35	96.309	298	5	1	1	292	1	298	0.0	594

TFs/TRs:

Gene ID	Type	Classification
Msa0026280	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0026280	Msa0074140	0.951002	5.100631e-109	-8.615850e-47
Msa0026280	Msa0074180	0.957031	7.213533e-115	-8.615850e-47
Msa0026280	Msa0116590	0.993568	1.205231e-200	-8.615850e-47
Msa0026280	Msa0223780	0.811231	7.762704e-51	-8.615850e-47
Msa0026280	Msa0350070	0.808481	3.032800e-50	-8.615850e-47
Msa0026280	Msa0396640	0.812743	3.636509e-51	-8.615850e-47
Msa0026280	Msa0415950	0.860432	2.074147e-63	-8.615850e-47
Msa0026280	Msa0438480	-0.805881	1.077686e-49	-8.615850e-47
Msa0026280	Msa0444170	0.814137	1.795640e-51	-8.615850e-47
Msa0026280	Msa0448980	0.812971	3.241542e-51	-8.615850e-47
Msa0026280	Msa0480250	0.854832	9.461683e-62	-8.615850e-47
Msa0026280	Msa0491730	0.826132	3.208228e-54	-8.615850e-47
Msa0026280	Msa0497160	0.824557	7.568885e-54	-8.615850e-47
Msa0026280	Msa0508080	0.822643	2.122736e-53	-8.615850e-47
Msa0026280	Msa0512360	-0.821774	3.377053e-53	-8.615850e-47
Msa0026280	Msa0689940	0.861262	1.160850e-63	-8.615850e-47
Msa0026280	Msa0792480	0.864149	1.496481e-64	-8.615850e-47
Msa0026280	Msa0896380	0.824910	6.247033e-54	-8.615850e-47
Msa0026280	Msa0961580	0.828883	7.019187e-55	-8.615850e-47
Msa0026280	Msa1009940	0.819427	1.168356e-52	-8.615850e-47
Msa0026280	Msa1064450	0.800971	1.122191e-48	-8.615850e-47
Msa0026280	Msa1139790	0.809973	1.451858e-50	-8.615850e-47
Msa0026280	Msa1186960	0.838718	2.434753e-57	-8.615850e-47
Msa0026280	Msa1321760	0.807615	4.636046e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0026280	MtrunA17_Chr1g0181771	96.309	298	5	1	1	292	1	298	0.0	594
Msa0026280	MtrunA17_Chr8g0348391	55.469	256	92	5	35	269	52	306	7.00e-86	260
Msa0026280	MtrunA17_Chr6g0469431	64.384	146	41	4	17	153	18	161	3.69e-56	181
Msa0026280	MtrunA17_Chr6g0481061	57.843	102	35	1	28	121	38	139	7.90e-26	106
Msa0026280	MtrunA17_Chr3g0109791	59.140	93	30	1	36	120	46	138	1.11e-25	104
Msa0026280	MtrunA17_Chr5g0433851	61.972	71	27	0	28	98	24	94	4.99e-25	103
Msa0026280	MtrunA17_Chr7g0276421	54.054	74	34	0	28	101	7	80	5.53e-23	99.0
Msa0026280	MtrunA17_Chr6g0469441	68.519	54	17	0	206	259	24	77	1.23e-21	87.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0026280	AT3G09600.1	67.050	261	73	4	21	269	17	276	9.04e-124	355
Msa0026280	AT3G09600.7	67.050	261	73	4	21	269	17	276	9.04e-124	355
Msa0026280	AT3G09600.2	66.541	266	70	5	21	274	17	275	5.82e-121	348
Msa0026280	AT3G09600.6	66.541	266	70	5	21	274	17	275	5.82e-121	348
Msa0026280	AT3G09600.4	68.526	251	66	4	21	259	17	266	6.04e-121	348
Msa0026280	AT5G02840.3	64.706	255	71	5	30	267	31	283	4.99e-111	323
Msa0026280	AT5G02840.1	62.452	261	79	5	30	273	31	289	3.53e-109	318
Msa0026280	AT5G02840.2	62.452	261	79	5	30	273	31	289	3.53e-109	318
Msa0026280	AT3G09600.3	65.899	217	61	4	65	269	5	220	3.90e-98	288
Msa0026280	AT3G09600.8	65.899	217	61	4	65	269	5	220	3.90e-98	288
Msa0026280	AT5G02840.4	63.913	230	64	5	30	242	31	258	5.59e-96	284
Msa0026280	AT5G02840.5	63.478	230	65	5	30	242	31	258	1.87e-95	283
Msa0026280	AT3G09600.5	65.315	222	58	5	65	274	5	219	4.53e-95	280
Msa0026280	AT3G09600.9	65.315	222	58	5	65	274	5	219	4.53e-95	280
Msa0026280	AT5G52660.1	54.198	262	109	3	19	269	44	305	1.25e-86	262
Msa0026280	AT5G52660.2	52.471	263	113	3	19	269	44	306	8.89e-86	260
Msa0026280	AT1G01520.1	55.906	254	94	6	26	269	40	285	5.36e-85	256
Msa0026280	AT4G01280.2	52.593	270	109	7	17	268	29	297	3.83e-84	255
Msa0026280	AT4G01280.1	52.045	269	111	7	17	268	29	296	6.33e-83	252
Msa0026280	AT1G01520.3	56.967	244	87	6	26	259	40	275	1.02e-82	251
Msa0026280	AT1G01520.2	55.507	227	83	6	26	242	40	258	7.44e-72	222
Msa0026280	AT1G01520.4	55.507	227	83	6	26	242	40	258	7.44e-72	222
Msa0026280	AT5G17300.1	55.000	100	37	1	29	120	37	136	1.68e-27	110
Msa0026280	AT5G37260.1	56.701	97	38	1	28	120	17	113	1.80e-26	105
Msa0026280	AT1G01520.5	71.429	63	18	0	207	269	139	201	2.48e-26	103
Msa0026280	AT1G01060.8	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0026280	AT1G01060.2	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0026280	AT1G01060.3	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0026280	AT1G01060.1	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0026280	AT1G01060.7	36.313	179	100	4	26	193	3	178	2.91e-25	105
Msa0026280	AT1G18330.1	55.319	94	34	2	36	121	39	132	1.96e-24	101
Msa0026280	AT1G01060.4	51.250	80	39	0	26	105	3	82	2.01e-24	103
Msa0026280	AT3G10113.1	55.319	94	34	2	36	121	54	147	3.95e-24	100
Msa0026280	AT1G18330.2	55.319	94	34	2	36	121	65	158	3.96e-24	100
Msa0026280	AT2G46830.1	59.722	72	29	0	26	97	3	74	2.12e-23	100

Find 99 sgRNAs with CRISPR-Local

Find 706 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTACACATGTGGCATATT+TGG	0.134325	1_1:+50048380	None:intergenic
CTTACAATGGGATCAAAATT+AGG	0.151868	1_1:+50050816	None:intergenic
CATAATAGAAACTAACTAAT+TGG	0.195892	1_1:+50057087	None:intergenic
CTACCAGCATCCATTGCTTT+TGG	0.209435	1_1:-50055962	Msa0026280:intron
TTGTTATGGCATAATGTTAA+TGG	0.252539	1_1:-50048454	Msa0026280:three_prime_UTR
CCGGACTTTGCTGAAGTTTA+CGG	0.260906	1_1:-50055205	Msa0026280:CDS
TGAGTTAGAATTAGAGTTCA+TGG	0.279860	1_1:+50057039	None:intergenic
CTCACAGTTTCAAAGTTTAT+AGG	0.310240	1_1:+50055118	None:intergenic
TGGCTCTAAAACAGTTATTC+AGG	0.322186	1_1:-50056748	Msa0026280:intron
CTTGACTTGGTAATTGTGTA+AGG	0.342024	1_1:+50056950	None:intergenic
TCACAGTTTCAAAGTTTATA+GGG	0.345459	1_1:+50055119	None:intergenic
ACGATATTTAACAGGTTTGC+CGG	0.354143	1_1:-50055224	Msa0026280:intron
ATTGTTATATTGCTCTGATT+TGG	0.364135	1_1:-50048516	Msa0026280:three_prime_UTR
TTACAATGGGATCAAAATTA+GGG	0.364435	1_1:+50050817	None:intergenic
CTAGTTGTTGTAGTTGTTGT+TGG	0.376561	1_1:+50057007	None:intergenic
TAACACTTCTACAGTTAGAT+TGG	0.377184	1_1:-50048847	Msa0026280:intron
TATTCAGATTTGATAGAGAT+TGG	0.391995	1_1:-50056791	Msa0026280:intron
TTCTTAAAGGTTCAAAAGAA+TGG	0.393543	1_1:-50056576	Msa0026280:CDS
AGACATACCCTGCAGGTAGA+AGG	0.398065	1_1:+50055924	None:intergenic
TGCACATGGCCGTTTGTATC+CGG	0.400201	1_1:+50055160	None:intergenic
AGCTCAATAATCTAATGAAA+AGG	0.409526	1_1:+50048331	None:intergenic
GGATGAATAGCTTTGCGCTT+AGG	0.413895	1_1:+50056525	None:intergenic
ACTAGTGGTGGAGATGCTTC+TGG	0.418390	1_1:-50056989	Msa0026280:CDS
GTTGGTGAACTATGAGTTGC+TGG	0.425901	1_1:+50048565	None:intergenic
GCTGAAGTTTACGGTTTCAT+TGG	0.426347	1_1:-50055196	Msa0026280:CDS
GATGAACTCAACAATCTTCA+AGG	0.432102	1_1:-50055863	Msa0026280:CDS
TTAGCTGACATTGGATCAAA+GGG	0.440291	1_1:-50055704	Msa0026280:intron
TGTGCAGAAGCTGAAGGAAA+TGG	0.443024	1_1:-50055143	Msa0026280:CDS
TTGACAACTTGTGTTCTGTT+TGG	0.443810	1_1:-50057150	Msa0026280:five_prime_UTR
ATAATAGAAACTAACTAATT+GGG	0.448680	1_1:+50057088	None:intergenic
ACACAAAATCCCGTGATTCA+TGG	0.453178	1_1:-50055605	Msa0026280:intron
CTACGGTGATTCTGATGAAT+GGG	0.456757	1_1:-50057241	Msa0026280:five_prime_UTR
TAGAATTAGAGTTCATGGTT+TGG	0.460644	1_1:+50057044	None:intergenic
CTACTTTGCTAGTGCTCAAG+TGG	0.471610	1_1:+50048952	None:intergenic
TTTACTGATTTAGCTGACAT+TGG	0.472761	1_1:-50055713	Msa0026280:intron
ACACTCCCATGCCTAACTTC+TGG	0.472837	1_1:+50048790	None:intergenic
TGCGTTGGTATTTGAGAAGT+AGG	0.483111	1_1:+50055632	None:intergenic
TTTCCTTCAGCTTCTGCACA+TGG	0.485443	1_1:+50055146	None:intergenic
ATGACAACAGTTACATTCAC+TGG	0.485686	1_1:+50048733	None:intergenic
CCATGCCTAACTTCTGGTTA+AGG	0.485901	1_1:+50048796	None:intergenic
ACTACGGTGATTCTGATGAA+TGG	0.486932	1_1:-50057242	Msa0026280:five_prime_UTR
AACAATCTTCAAGGAAATGA+AGG	0.487995	1_1:-50055854	Msa0026280:intron
TTGCGCTTAGGACGAGGAGG+AGG	0.489119	1_1:+50056537	None:intergenic
ATCAGCAACAGCGGTCTTAG+TGG	0.492479	1_1:-50055680	Msa0026280:CDS
GAACTCTAATTCTAACTCAA+TGG	0.493422	1_1:-50057035	Msa0026280:CDS
GCTCAATAATCTAATGAAAA+GGG	0.493803	1_1:+50048332	None:intergenic
GCAAATACCCTTCTACCTGC+AGG	0.497509	1_1:-50055932	Msa0026280:CDS
ACCTGCAGGGTATGTCTCGT+GGG	0.505026	1_1:-50055918	Msa0026280:CDS
CATGCTGATGAATACTTGTC+AGG	0.511561	1_1:-50055885	Msa0026280:CDS
AAATTGAATTATGAAATGTT+CGG	0.517235	1_1:-50057187	Msa0026280:five_prime_UTR
TACCTGCAGGGTATGTCTCG+TGG	0.522585	1_1:-50055919	Msa0026280:CDS
AGTTGCACTCAGCTGTAAAG+TGG	0.529497	1_1:-50048760	Msa0026280:three_prime_UTR
TTTAGCTGACATTGGATCAA+AGG	0.530841	1_1:-50055705	Msa0026280:intron
CCGTAAACTTCAGCAAAGTC+CGG	0.533484	1_1:+50055205	None:intergenic
GCGTTGGTATTTGAGAAGTA+GGG	0.533606	1_1:+50055633	None:intergenic
AGACCAGCTTTCTCTTGACT+TGG	0.533707	1_1:+50056937	None:intergenic
AGAAACTAACTAATTGGGTA+TGG	0.541243	1_1:+50057093	None:intergenic
TGGAGATGCTTCTGGTAAGA+AGG	0.544373	1_1:-50056981	Msa0026280:CDS
CTTAACCAGAAGTTAGGCAT+GGG	0.549145	1_1:-50048795	Msa0026280:three_prime_UTR
TACTATGACTATTCTTGCTG+TGG	0.551136	1_1:+50048704	None:intergenic
CCTTAACCAGAAGTTAGGCA+TGG	0.552640	1_1:-50048796	Msa0026280:three_prime_UTR
GAGCAATATAACAATAGCTA+TGG	0.552705	1_1:+50048524	None:intergenic
CAAACATGGATGGAAGATTG+AGG	0.557545	1_1:-50048823	Msa0026280:three_prime_UTR
ATAGCTTTGCGCTTAGGACG+AGG	0.563263	1_1:+50056531	None:intergenic
TTCAAAGTCGGTAACTCGGT+TGG	0.584191	1_1:+50048547	None:intergenic
GACATACCCTGCAGGTAGAA+GGG	0.588018	1_1:+50055925	None:intergenic
GGACAGTATTATTCTGTCTG+TGG	0.589210	1_1:-50057272	Msa0026280:five_prime_UTR
TGCAGTGATAACTATAGTGA+TGG	0.589386	1_1:+50057122	None:intergenic
TTACCAAGTCAAGAGAAAGC+TGG	0.591540	1_1:-50056940	Msa0026280:CDS
TGCCGAAGAGCCAAAAGCAA+TGG	0.592704	1_1:+50055952	None:intergenic
GACAGTATTATTCTGTCTGT+GGG	0.596269	1_1:-50057271	Msa0026280:five_prime_UTR
ACAACTACAACAACTAGTGG+TGG	0.601385	1_1:-50057001	Msa0026280:CDS
GATGAGAATAACGATGCAGT+AGG	0.601883	1_1:-50049019	Msa0026280:CDS
ACTTCTCAAATACCAACGCA+AGG	0.604376	1_1:-50055629	Msa0026280:CDS
CAAATACCCTTCTACCTGCA+GGG	0.604923	1_1:-50055931	Msa0026280:CDS
ATGGTTCAAAGTCGGTAACT+CGG	0.604982	1_1:+50048543	None:intergenic
AAAGTAGCAATATGTTGACT+TGG	0.608926	1_1:-50048936	Msa0026280:intron
ACAGTTAGATTGGACAAACA+TGG	0.611947	1_1:-50048837	Msa0026280:intron
TGTCTGTGGGCACAACACTA+CGG	0.612371	1_1:-50057258	Msa0026280:five_prime_UTR
TGAAAAGGGTCATTTCGCCC+AGG	0.612521	1_1:+50048346	None:intergenic
CGGCCATGTGCAGAAGCTGA+AGG	0.613903	1_1:-50055149	Msa0026280:CDS
CAATAGCTATGGTTCAAAGT+CGG	0.614980	1_1:+50048535	None:intergenic
AGTTTCTATTATGTTCTCTG+TGG	0.620410	1_1:-50057077	Msa0026280:exon
TGCGCTTAGGACGAGGAGGA+GGG	0.622142	1_1:+50056538	None:intergenic
CAGACGATTACCATGAATCA+CGG	0.628602	1_1:+50055595	None:intergenic
AGACGATTACCATGAATCAC+GGG	0.628967	1_1:+50055596	None:intergenic
AGTGATAACTATAGTGATGG+AGG	0.633179	1_1:+50057125	None:intergenic
TCCCACGAGACATACCCTGC+AGG	0.633438	1_1:+50055917	None:intergenic
TTAGATTGGACAAACATGGA+TGG	0.635269	1_1:-50048833	Msa0026280:three_prime_UTR
CTGACAAGTATTCATCAGCA+TGG	0.637093	1_1:+50055886	None:intergenic
ACAACAACTACAACAACTAG+TGG	0.647197	1_1:-50057004	Msa0026280:CDS
GGCTAGACAAGTTGACAGTG+AGG	0.653452	1_1:+50050838	None:intergenic
AAAGTGTGACTTTACACATG+TGG	0.657504	1_1:+50048371	None:intergenic
CTTCTCAAATACCAACGCAA+GGG	0.669437	1_1:-50055628	Msa0026280:CDS
TCAAAGGGGATCAGCAACAG+CGG	0.674075	1_1:-50055689	Msa0026280:CDS
GTGTTGAAGATACTAATACA+AGG	0.674684	1_1:-50055658	Msa0026280:CDS
GCTTTGCGCTTAGGACGAGG+AGG	0.703477	1_1:+50056534	None:intergenic
TAGCTGACATTGGATCAAAG+GGG	0.749798	1_1:-50055703	Msa0026280:CDS
TGTGGTGTATATGAAACGTG+AGG	0.781020	1_1:-50057293	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTATTAAAAAATAATTTAA+TGG	+	chr1_1:50056189-50056208	None:intergenic	0.0%
!!	TTATGAATAAATTAAATAAG+AGG	-	chr1_1:50054907-50054926	Msa0026280:intron	10.0%
!!	TTAATAAAAATATGAAGAAA+AGG	-	chr1_1:50056201-50056220	Msa0026280:intron	10.0%
!!!	AATTTTCTGTATAATATTTT+AGG	-	chr1_1:50057233-50057252	Msa0026280:five_prime_UTR	10.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!	GGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054486-50054505	None:intergenic	100.0%
!!	AAATTGAATTATGAAATGTT+CGG	-	chr1_1:50048328-50048347	Msa0026280:three_prime_UTR	15.0%
!!	ATAATAGAAACTAACTAATT+GGG	+	chr1_1:50048430-50048449	None:intergenic	15.0%
!!	ATATATTTGAAAACAAATTG+TGG	-	chr1_1:50049199-50049218	Msa0026280:intron	15.0%
!!	GTTTATATTATATGATACTA+CGG	+	chr1_1:50050008-50050027	None:intergenic	15.0%
!!	AAATTGAATCATTAAAAACA+CGG	-	chr1_1:50051033-50051052	Msa0026280:intron	15.0%
!!	CTTATTAATTATGAGTTTAT+CGG	+	chr1_1:50052082-50052101	None:intergenic	15.0%
!!!	AAAACATGATTTGAAATTAA+GGG	-	chr1_1:50052340-50052359	Msa0026280:intron	15.0%
!!	CTTATTAATTATGAGTTTAT+CGG	+	chr1_1:50052082-50052101	None:intergenic	15.0%
!!!	AAAACATGATTTGAAATTAA+GGG	-	chr1_1:50052340-50052359	Msa0026280:intron	15.0%
!!!	TATATAGTTTTGTAACATAT+TGG	-	chr1_1:50054747-50054766	Msa0026280:intron	15.0%
!!!	TTTTAGTTTTTCAACTAATA+GGG	+	chr1_1:50055041-50055060	None:intergenic	15.0%
!!!	ATTTTAGTTTTTCAACTAAT+AGG	+	chr1_1:50055042-50055061	None:intergenic	15.0%
!!!	GAAAAACTAAAATAGTTTTT+AGG	-	chr1_1:50055049-50055068	Msa0026280:intron	15.0%
!!	CATAATAGAAACTAACTAAT+TGG	+	chr1_1:50048431-50048450	None:intergenic	20.0%
!!	AAAGAATGATATAAGATTGA+AGG	+	chr1_1:50048659-50048678	None:intergenic	20.0%
!!	AAAAAAAAAGAGTAAAGACA+TGG	+	chr1_1:50048805-50048824	None:intergenic	20.0%
!!!	AACCTTTAAGAAGTATTTTT+GGG	+	chr1_1:50048931-50048950	None:intergenic	20.0%
!!!	TTTTCTTTTCTCTTTTTACT+TGG	-	chr1_1:50049056-50049075	Msa0026280:intron	20.0%
!!	AATATATACATCGAAAATTG+TGG	+	chr1_1:50049186-50049205	None:intergenic	20.0%
!!!	TATTTTGACACAAATTTAAC+TGG	+	chr1_1:50049455-50049474	None:intergenic	20.0%
!!	TCATATAACATAATAAGTAG+TGG	+	chr1_1:50049781-50049800	None:intergenic	20.0%
!!!	TTAAGTTTTGAAACAATACT+CGG	-	chr1_1:50049960-50049979	Msa0026280:intron	20.0%
!!	ACTTAGCTATATAATCAAAT+AGG	-	chr1_1:50050492-50050511	Msa0026280:intron	20.0%
!!!	GTTTTTAATGATTCAATTTG+CGG	+	chr1_1:50051032-50051051	None:intergenic	20.0%
!!!	CAAAACATGATTTGAAATTA+AGG	-	chr1_1:50052339-50052358	Msa0026280:intron	20.0%
!!!	AAACATGATTTGAAATTAAG+GGG	-	chr1_1:50052341-50052360	Msa0026280:intron	20.0%
!!	ATAGCTTAACATTGAATAAT+AGG	-	chr1_1:50052535-50052554	Msa0026280:intron	20.0%
!!	TAGCTTAACATTGAATAATA+GGG	-	chr1_1:50052536-50052555	Msa0026280:intron	20.0%
!!	ATCAAATTAACCTCTAATAT+TGG	+	chr1_1:50052717-50052736	None:intergenic	20.0%
!!!	ATATTAGAGGTTAATTTGAT+AGG	-	chr1_1:50052717-50052736	Msa0026280:intron	20.0%
!!!	TATTAGAGGTTAATTTGATA+GGG	-	chr1_1:50052718-50052737	Msa0026280:intron	20.0%
!!!	ACATGTTAATTTTACTCTTT+TGG	-	chr1_1:50052842-50052861	Msa0026280:intron	20.0%
!!!	CATGTTAATTTTACTCTTTT+GGG	-	chr1_1:50052843-50052862	Msa0026280:intron	20.0%
!!	AAGCTATATATTTACACTAA+AGG	-	chr1_1:50052887-50052906	Msa0026280:intron	20.0%
!!	GAAATTATTATTCACTAATG+TGG	-	chr1_1:50053010-50053029	Msa0026280:intron	20.0%
!!!	CAAAACATGATTTGAAATTA+AGG	-	chr1_1:50052339-50052358	Msa0026280:intron	20.0%
!!!	AAACATGATTTGAAATTAAG+GGG	-	chr1_1:50052341-50052360	Msa0026280:intron	20.0%
!!	ATAGCTTAACATTGAATAAT+AGG	-	chr1_1:50052535-50052554	Msa0026280:intron	20.0%
!!	TAGCTTAACATTGAATAATA+GGG	-	chr1_1:50052536-50052555	Msa0026280:intron	20.0%
!!	ATCAAATTAACCTCTAATAT+TGG	+	chr1_1:50052717-50052736	None:intergenic	20.0%
!!!	ATATTAGAGGTTAATTTGAT+AGG	-	chr1_1:50052717-50052736	Msa0026280:intron	20.0%
!!!	TATTAGAGGTTAATTTGATA+GGG	-	chr1_1:50052718-50052737	Msa0026280:intron	20.0%
!!!	ACATGTTAATTTTACTCTTT+TGG	-	chr1_1:50052842-50052861	Msa0026280:intron	20.0%
!!!	CATGTTAATTTTACTCTTTT+GGG	-	chr1_1:50052843-50052862	Msa0026280:intron	20.0%
!!	AAGCTATATATTTACACTAA+AGG	-	chr1_1:50052887-50052906	Msa0026280:intron	20.0%
!!	GAAATTATTATTCACTAATG+TGG	-	chr1_1:50053010-50053029	Msa0026280:intron	20.0%
!!	GTTTGAACTTATAATATCAA+AGG	+	chr1_1:50054179-50054198	None:intergenic	20.0%
!!	TTGATATTGAAACTTACAAT+GGG	+	chr1_1:50054714-50054733	None:intergenic	20.0%
!!	ATTGATATTGAAACTTACAA+TGG	+	chr1_1:50054715-50054734	None:intergenic	20.0%
!!	GAAAACAAAATAAACTTTCT+GGG	+	chr1_1:50054773-50054792	None:intergenic	20.0%
!!	TGAAAACAAAATAAACTTTC+TGG	+	chr1_1:50054774-50054793	None:intergenic	20.0%
!!	TTCATAAATATAGTGACTAT+GGG	+	chr1_1:50054894-50054913	None:intergenic	20.0%
!!	ATTCATAAATATAGTGACTA+TGG	+	chr1_1:50054895-50054914	None:intergenic	20.0%
!!!	TTTAGTTTTTCAACTAATAG+GGG	+	chr1_1:50055040-50055059	None:intergenic	20.0%
!	TATTCAGATTTGATAGAGAT+TGG	-	chr1_1:50048724-50048743	Msa0026280:three_prime_UTR	25.0%
!!	AAGAAGATTGAAGATTTTGT+TGG	-	chr1_1:50048747-50048766	Msa0026280:three_prime_UTR	25.0%
!!!	GAACCTTTAAGAAGTATTTT+TGG	+	chr1_1:50048932-50048951	None:intergenic	25.0%
!	TTCTTAAAGGTTCAAAAGAA+TGG	-	chr1_1:50048939-50048958	Msa0026280:three_prime_UTR	25.0%
!	GATGAACAATATGTAAAACA+AGG	-	chr1_1:50049122-50049141	Msa0026280:intron	25.0%
!	AATACAATTTGAGTGATCAA+GGG	-	chr1_1:50049271-50049290	Msa0026280:intron	25.0%
!	ACAAAAAGTAGCAATTGTTA+AGG	+	chr1_1:50049510-50049529	None:intergenic	25.0%
!!	TTAAGTTGTGAAACAATACT+AGG	-	chr1_1:50050106-50050125	Msa0026280:intron	25.0%
!	ATATAAAAAGTTGCATGCAT+AGG	-	chr1_1:50050135-50050154	Msa0026280:intron	25.0%
!!!	TCATTTTGACGATATTTAAC+AGG	-	chr1_1:50050283-50050302	Msa0026280:intron	25.0%
!	TCACAGTTTCAAAGTTTATA+GGG	+	chr1_1:50050399-50050418	None:intergenic	25.0%
!!!	ATATCGGTTGTTTTTTTTTC+TGG	+	chr1_1:50050742-50050761	None:intergenic	25.0%
!	TTTCTCTTTATCCAATCAAA+AGG	+	chr1_1:50051688-50051707	None:intergenic	25.0%
!	TGTCTTTGGATAATTCAAAT+TGG	+	chr1_1:50051815-50051834	None:intergenic	25.0%
!	AAATATTATCCTCCTCAAAA+TGG	+	chr1_1:50052145-50052164	None:intergenic	25.0%
!	ATGGTTTATTTGGATCATAA+AGG	+	chr1_1:50052236-50052255	None:intergenic	25.0%
!	TCCAAATAAACCATTTCTTA+AGG	-	chr1_1:50052242-50052261	Msa0026280:intron	25.0%
!	CCAAATAAACCATTTCTTAA+GGG	-	chr1_1:50052243-50052262	Msa0026280:intron	25.0%
!	TTAAAATACAACAGTTTCCA+AGG	-	chr1_1:50052272-50052291	Msa0026280:intron	25.0%
!!	ACTTATGATAACCTTTTTGA+AGG	-	chr1_1:50052305-50052324	Msa0026280:intron	25.0%
!!	AACATGATTTGAAATTAAGG+GGG	-	chr1_1:50052342-50052361	Msa0026280:intron	25.0%
!!!	GACATTCAAAATGGTTTTAA+TGG	+	chr1_1:50052414-50052433	None:intergenic	25.0%
!	GAATGTTCTTTAACATTATC+AGG	-	chr1_1:50052505-50052524	Msa0026280:intron	25.0%
!	ATAAGCTAATCAAAATGTCA+TGG	-	chr1_1:50052669-50052688	Msa0026280:intron	25.0%
!	TAAGCTAATCAAAATGTCAT+GGG	-	chr1_1:50052670-50052689	Msa0026280:intron	25.0%
!!	ATTAGAGGTTAATTTGATAG+GGG	-	chr1_1:50052719-50052738	Msa0026280:intron	25.0%
!!	GCTTTTTAGATGAAATTCAA+AGG	+	chr1_1:50052979-50052998	None:intergenic	25.0%
!	AATTTCATCTAAAAAGCTTG+AGG	-	chr1_1:50052982-50053001	Msa0026280:intron	25.0%
!	CTTCATCCTTTGATATTATA+AGG	-	chr1_1:50053073-50053092	Msa0026280:intron	25.0%
!	GTTTGACCTTATAATATCAA+AGG	+	chr1_1:50053082-50053101	None:intergenic	25.0%
!	ATCTTAAAAAACTACCTATG+AGG	+	chr1_1:50053124-50053143	None:intergenic	25.0%
!	AAATATTATCCTCCTCAAAA+TGG	+	chr1_1:50052145-50052164	None:intergenic	25.0%
!	ATGGTTTATTTGGATCATAA+AGG	+	chr1_1:50052236-50052255	None:intergenic	25.0%
!	TCCAAATAAACCATTTCTTA+AGG	-	chr1_1:50052242-50052261	Msa0026280:intron	25.0%
!	CCAAATAAACCATTTCTTAA+GGG	-	chr1_1:50052243-50052262	Msa0026280:intron	25.0%
!	TTAAAATACAACAGTTTCCA+AGG	-	chr1_1:50052272-50052291	Msa0026280:intron	25.0%
!!	ACTTATGATAACCTTTTTGA+AGG	-	chr1_1:50052305-50052324	Msa0026280:intron	25.0%
!!	AACATGATTTGAAATTAAGG+GGG	-	chr1_1:50052342-50052361	Msa0026280:intron	25.0%
!	GAATGTTCTTTAACATTATC+AGG	-	chr1_1:50052505-50052524	Msa0026280:intron	25.0%
!	ATAAGCTAATCAAAATGTCA+TGG	-	chr1_1:50052669-50052688	Msa0026280:intron	25.0%
!	TAAGCTAATCAAAATGTCAT+GGG	-	chr1_1:50052670-50052689	Msa0026280:intron	25.0%
!!	ATTAGAGGTTAATTTGATAG+GGG	-	chr1_1:50052719-50052738	Msa0026280:intron	25.0%
!	ATTATGCGAATAATTAACTC+TGG	-	chr1_1:50052920-50052939	Msa0026280:intron	25.0%
!!	GCTTTTTAGATGAAATTCAA+AGG	+	chr1_1:50052979-50052998	None:intergenic	25.0%
!	AATTTCATCTAAAAAGCTTG+AGG	-	chr1_1:50052982-50053001	Msa0026280:intron	25.0%
!	CATTATATGGGTGAATAAAT+TGG	+	chr1_1:50054435-50054454	None:intergenic	25.0%
!	CAATTTATTCACCCATATAA+TGG	-	chr1_1:50054433-50054452	Msa0026280:intron	25.0%
!	TTAACTAGGAAATCAAAATG+AGG	-	chr1_1:50054533-50054552	Msa0026280:intron	25.0%
!	TTACAATGGGATCAAAATTA+GGG	+	chr1_1:50054701-50054720	None:intergenic	25.0%
!!!	ATAGACCAACACTTATTTTT+TGG	-	chr1_1:50055411-50055430	Msa0026280:intron	25.0%
!	TTTCAGCTTATTTCGAATTA+GGG	+	chr1_1:50055443-50055462	None:intergenic	25.0%
!!	TTTTCAGCTTATTTCGAATT+AGG	+	chr1_1:50055444-50055463	None:intergenic	25.0%
!!!	AGTAGTTATGTTGATTTTCA+AGG	-	chr1_1:50056895-50056914	Msa0026280:intron	25.0%
!	ATTGTTATATTGCTCTGATT+TGG	-	chr1_1:50056999-50057018	Msa0026280:CDS	25.0%
!!	AGAGACATAGATTTTTGTTA+TGG	-	chr1_1:50057047-50057066	Msa0026280:CDS	25.0%
!	TTGTTATGGCATAATGTTAA+TGG	-	chr1_1:50057061-50057080	Msa0026280:CDS	25.0%
!	ATGGTCTGTATCAAAAAATT+AGG	-	chr1_1:50057080-50057099	Msa0026280:exon	25.0%
!	GCTCAATAATCTAATGAAAA+GGG	+	chr1_1:50057186-50057205	None:intergenic	25.0%
!	AGCTCAATAATCTAATGAAA+AGG	+	chr1_1:50057187-50057206	None:intergenic	25.0%
!!!	CTGTATAATATTTTAGGAGT+TGG	-	chr1_1:50057239-50057258	Msa0026280:five_prime_UTR	25.0%
!	TCATTCATTCATCTTTTGCA+CGG	+	chr1_1:50048301-50048320	None:intergenic	30.0%
	AGAAACTAACTAATTGGGTA+TGG	+	chr1_1:50048425-50048444	None:intergenic	30.0%
	AGTTTCTATTATGTTCTCTG+TGG	-	chr1_1:50048438-50048457	Msa0026280:three_prime_UTR	30.0%
	TAGAATTAGAGTTCATGGTT+TGG	+	chr1_1:50048474-50048493	None:intergenic	30.0%
	TGAGTTAGAATTAGAGTTCA+TGG	+	chr1_1:50048479-50048498	None:intergenic	30.0%
	GAACTCTAATTCTAACTCAA+TGG	-	chr1_1:50048480-50048499	Msa0026280:three_prime_UTR	30.0%
	GATATAAGATTGAAGGTAGA+TGG	+	chr1_1:50048652-50048671	None:intergenic	30.0%
	TGCCCAAAAATACTTCTTAA+AGG	-	chr1_1:50048926-50048945	Msa0026280:intron	30.0%
!!!	TTTGTTGCTTTTTGTGGATA+AGG	+	chr1_1:50049014-50049033	None:intergenic	30.0%
!!!	CCATTTTTTGTTGCTTTTTG+TGG	+	chr1_1:50049020-50049039	None:intergenic	30.0%
	CCACAAAAAGCAACAAAAAA+TGG	-	chr1_1:50049017-50049036	Msa0026280:CDS	30.0%
	ATCATGCATATTTAGACATC+TGG	-	chr1_1:50049231-50049250	Msa0026280:intron	30.0%
	GAATACAATTTGAGTGATCA+AGG	-	chr1_1:50049270-50049289	Msa0026280:intron	30.0%
	AATGGACGATTAATTACGTT+TGG	+	chr1_1:50049390-50049409	None:intergenic	30.0%
	GATGATGAACTCAGTTTAAA+TGG	+	chr1_1:50049408-50049427	None:intergenic	30.0%
	AACAAATTTCTACGGCAATT+TGG	+	chr1_1:50049430-50049449	None:intergenic	30.0%
	AACTGGAGAACAAATTTCTA+CGG	+	chr1_1:50049438-50049457	None:intergenic	30.0%
	AACAATCTTCAAGGAAATGA+AGG	-	chr1_1:50049661-50049680	Msa0026280:intron	30.0%
!!	TTTACTGATTTAGCTGACAT+TGG	-	chr1_1:50049802-50049821	Msa0026280:intron	30.0%
	GTGTTGAAGATACTAATACA+AGG	-	chr1_1:50049857-50049876	Msa0026280:intron	30.0%
	TGAGTTTATTGAAATCCTTG+CGG	-	chr1_1:50050031-50050050	Msa0026280:intron	30.0%
!	CATGCAACTTTTTATATGTG+AGG	+	chr1_1:50050132-50050151	None:intergenic	30.0%
	TGAGTTTATTGAAATCCTTG+AGG	-	chr1_1:50050031-50050050	Msa0026280:intron	30.0%
	CTCACAGTTTCAAAGTTTAT+AGG	+	chr1_1:50050400-50050419	None:intergenic	30.0%
!!!	TGTTTTTTTTTCTGGTTTGC+TGG	+	chr1_1:50050734-50050753	None:intergenic	30.0%
!!!	TTTTTTCTGTTTTTTGCTGC+TGG	+	chr1_1:50050783-50050802	None:intergenic	30.0%
	CAAAAAACAGAAAAAACCTG+AGG	-	chr1_1:50050787-50050806	Msa0026280:intron	30.0%
!!!	GTTTGTTTTAAGAATGGTGT+TGG	+	chr1_1:50050935-50050954	None:intergenic	30.0%
	TCCCAATGGACAAATAAATT+AGG	-	chr1_1:50051152-50051171	Msa0026280:intron	30.0%
	GCCTAATTTATTTGTCCATT+GGG	+	chr1_1:50051156-50051175	None:intergenic	30.0%
	CAATGGACAAATAAATTAGG+CGG	-	chr1_1:50051155-50051174	Msa0026280:intron	30.0%
!!	AAAGCCAAATTCACTTTTGA+GGG	-	chr1_1:50051324-50051343	Msa0026280:intron	30.0%
	AATACCCTCAAAAGTGAATT+TGG	+	chr1_1:50051331-50051350	None:intergenic	30.0%
	TTGGATAAAGAGAAAAGTCT+AGG	-	chr1_1:50051693-50051712	Msa0026280:intron	30.0%
!!	TTTGGTTTGTAAACCAAAAG+AGG	+	chr1_1:50052036-50052055	None:intergenic	30.0%
	GAGTTTATCGGAAGATAAAT+TGG	+	chr1_1:50052070-50052089	None:intergenic	30.0%
	CATAACTAGGAAAGTTTATG+AGG	-	chr1_1:50052119-50052138	Msa0026280:intron	30.0%
!	TTATATCGCTTCAAGTTACT+AGG	+	chr1_1:50052175-50052194	None:intergenic	30.0%
	ACTTTATTCTGCTATATGTG+TGG	-	chr1_1:50052208-50052227	Msa0026280:intron	30.0%
	CCCTTAAGAAATGGTTTATT+TGG	+	chr1_1:50052246-50052265	None:intergenic	30.0%
	TAAGACTTTCCCTTAAGAAA+TGG	+	chr1_1:50052255-50052274	None:intergenic	30.0%
!	CATAAGTTTTCTTCTTTCCT+TGG	+	chr1_1:50052292-50052311	None:intergenic	30.0%
	ATTAAGGGGGAAAAAAATAG+AGG	-	chr1_1:50052355-50052374	Msa0026280:intron	30.0%
	AGGACTTTATCATATCAAAG+TGG	-	chr1_1:50052375-50052394	Msa0026280:intron	30.0%
	AAAGCACATGACATTCAAAA+TGG	+	chr1_1:50052423-50052442	None:intergenic	30.0%
!	TATGATAACTTGCCTCAATA+AGG	-	chr1_1:50052591-50052610	Msa0026280:intron	30.0%
!	ATGATAACTTGCCTCAATAA+GGG	-	chr1_1:50052592-50052611	Msa0026280:intron	30.0%
!	TTAGAGGTTAATTTGATAGG+GGG	-	chr1_1:50052720-50052739	Msa0026280:intron	30.0%
	AAATTAACATGTGTTTCCCA+TGG	+	chr1_1:50052834-50052853	None:intergenic	30.0%
!	TTAACTCTGGAGAAACTATT+AGG	-	chr1_1:50052933-50052952	Msa0026280:intron	30.0%
!	CATTTTACAACTGTCTCTTA+GGG	-	chr1_1:50053042-50053061	Msa0026280:intron	30.0%
!	ATTTTACAACTGTCTCTTAG+GGG	-	chr1_1:50053043-50053062	Msa0026280:intron	30.0%
	CATAACTAGGAAAGTTTATG+AGG	-	chr1_1:50052119-50052138	Msa0026280:intron	30.0%
!	TTATATCGCTTCAAGTTACT+AGG	+	chr1_1:50052175-50052194	None:intergenic	30.0%
	ACTTTATTCTGCTATATGTG+TGG	-	chr1_1:50052208-50052227	Msa0026280:intron	30.0%
	CCCTTAAGAAATGGTTTATT+TGG	+	chr1_1:50052246-50052265	None:intergenic	30.0%
	TAAGACTTTCCCTTAAGAAA+TGG	+	chr1_1:50052255-50052274	None:intergenic	30.0%
!	CATAAGTTTTCTTCTTTCCT+TGG	+	chr1_1:50052292-50052311	None:intergenic	30.0%
	ATTAAGGGGGAAAAAAATAG+AGG	-	chr1_1:50052355-50052374	Msa0026280:intron	30.0%
	AGGACTTTATCATATCAAAG+TGG	-	chr1_1:50052375-50052394	Msa0026280:intron	30.0%
!!!	GACATTCAAAATGGTTTTAG+TGG	+	chr1_1:50053511-50053530	None:intergenic	30.0%
	AAAGCACATGACATTCAAAA+TGG	+	chr1_1:50052423-50052442	None:intergenic	30.0%
!	TATGATAACTTGCCTCAATA+AGG	-	chr1_1:50052591-50052610	Msa0026280:intron	30.0%
!	ATGATAACTTGCCTCAATAA+GGG	-	chr1_1:50052592-50052611	Msa0026280:intron	30.0%
!	TTAGAGGTTAATTTGATAGG+GGG	-	chr1_1:50052720-50052739	Msa0026280:intron	30.0%
	AAATTAACATGTGTTTCCCA+TGG	+	chr1_1:50052834-50052853	None:intergenic	30.0%
!	TTAACTCTGGAGAAACTATT+AGG	-	chr1_1:50052933-50052952	Msa0026280:intron	30.0%
!	CATTTTACAACTGTCTCTTA+GGG	-	chr1_1:50053042-50053061	Msa0026280:intron	30.0%
!	ATTTTACAACTGTCTCTTAG+GGG	-	chr1_1:50053043-50053062	Msa0026280:intron	30.0%
!!	TGTTTTAAGCCTCTTAACAT+GGG	+	chr1_1:50054372-50054391	None:intergenic	30.0%
!!!	TTGTTTTAAGCCTCTTAACA+TGG	+	chr1_1:50054373-50054392	None:intergenic	30.0%
	GAAGAATAGGACCATTATAT+GGG	+	chr1_1:50054447-50054466	None:intergenic	30.0%
	AGAAGAATAGGACCATTATA+TGG	+	chr1_1:50054448-50054467	None:intergenic	30.0%
	AATATCAGATGCAGAAGAAT+AGG	+	chr1_1:50054460-50054479	None:intergenic	30.0%
	TATATTTGATGTTCTTGTGC+AGG	-	chr1_1:50054635-50054654	Msa0026280:intron	30.0%
	CTTACAATGGGATCAAAATT+AGG	+	chr1_1:50054702-50054721	None:intergenic	30.0%
	ATTCATTCCAAGTATCATTC+TGG	-	chr1_1:50054809-50054828	Msa0026280:intron	30.0%
	TTAGAAACCAGAATGATACT+TGG	+	chr1_1:50054819-50054838	None:intergenic	30.0%
	GTTTAGTGTGCTAACATATA+TGG	-	chr1_1:50055101-50055120	Msa0026280:intron	30.0%
	TTCTTGTGCATAACGTTTAT+AGG	+	chr1_1:50055153-50055172	None:intergenic	30.0%
	CTGATCCAAAAAATAAGTGT+TGG	+	chr1_1:50055419-50055438	None:intergenic	30.0%
	TAATCCCATTCTTGAGAATT+AGG	-	chr1_1:50055491-50055510	Msa0026280:intron	30.0%
	AATCCCATTCTTGAGAATTA+GGG	-	chr1_1:50055492-50055511	Msa0026280:intron	30.0%
	AAAGGCAATGAAGAAATCAA+TGG	-	chr1_1:50055823-50055842	Msa0026280:intron	30.0%
	AAGAAATCAATGGAGAAGAA+GGG	-	chr1_1:50055833-50055852	Msa0026280:intron	30.0%
!!	GTTTGTTGTCTTGAGAATTA+GGG	+	chr1_1:50056039-50056058	None:intergenic	30.0%
	TTCCAGTTAAGAAAGTTTCT+TGG	+	chr1_1:50056149-50056168	None:intergenic	30.0%
	AGCATCACTAACTCTATATT+CGG	+	chr1_1:50056341-50056360	None:intergenic	30.0%
!	AAAGTAGCAATATGTTGACT+TGG	-	chr1_1:50056579-50056598	Msa0026280:CDS	30.0%
	TAACACTTCTACAGTTAGAT+TGG	-	chr1_1:50056668-50056687	Msa0026280:intron	30.0%
!!	GATTTTCAAGGTTCAAACTT+TGG	-	chr1_1:50056907-50056926	Msa0026280:CDS	30.0%
	GAGCAATATAACAATAGCTA+TGG	+	chr1_1:50056994-50057013	None:intergenic	30.0%
!	AGCTCATTTTCATTATGAAG+AGG	-	chr1_1:50057203-50057222	Msa0026280:five_prime_UTR	30.0%
!	GCTCATTTTCATTATGAAGA+GGG	-	chr1_1:50057204-50057223	Msa0026280:five_prime_UTR	30.0%
	GACAGTATTATTCTGTCTGT+GGG	-	chr1_1:50048244-50048263	Msa0026280:three_prime_UTR	35.0%
	TTGACAACTTGTGTTCTGTT+TGG	-	chr1_1:50048365-50048384	Msa0026280:three_prime_UTR	35.0%
	AGTGATAACTATAGTGATGG+AGG	+	chr1_1:50048393-50048412	None:intergenic	35.0%
	TGCAGTGATAACTATAGTGA+TGG	+	chr1_1:50048396-50048415	None:intergenic	35.0%
	CTAGTTGTTGTAGTTGTTGT+TGG	+	chr1_1:50048511-50048530	None:intergenic	35.0%
	ACAACAACTACAACAACTAG+TGG	-	chr1_1:50048511-50048530	Msa0026280:three_prime_UTR	35.0%
!!	CTTGACTTGGTAATTGTGTA+AGG	+	chr1_1:50048568-50048587	None:intergenic	35.0%
!!	TGGCTCTAAAACAGTTATTC+AGG	-	chr1_1:50048767-50048786	Msa0026280:three_prime_UTR	35.0%
	CGTTGAACACTTGAAAATTG+TGG	-	chr1_1:50049311-50049330	Msa0026280:intron	35.0%
	GAAAATTGTGGCTAAGTACA+TGG	-	chr1_1:50049323-50049342	Msa0026280:intron	35.0%
!!!	TTTGTGTCACTTACCAGTTT+TGG	-	chr1_1:50049525-50049544	Msa0026280:intron	35.0%
	GATGAACTCAACAATCTTCA+AGG	-	chr1_1:50049652-50049671	Msa0026280:intron	35.0%
	GGTATGCATAATGCATGTTA+TGG	-	chr1_1:50049682-50049701	Msa0026280:intron	35.0%
	TTGATGCCAATAGTCTAGAT+TGG	-	chr1_1:50049732-50049751	Msa0026280:intron	35.0%
	TTTAGCTGACATTGGATCAA+AGG	-	chr1_1:50049810-50049829	Msa0026280:intron	35.0%
	TTAGCTGACATTGGATCAAA+GGG	-	chr1_1:50049811-50049830	Msa0026280:intron	35.0%
!	GAAACAATTTTCTAGATGCG+AGG	+	chr1_1:50049986-50050005	None:intergenic	35.0%
	GTTTATTGAAATCCTTGAGG+TGG	-	chr1_1:50050184-50050203	Msa0026280:intron	35.0%
	CAAAATGACAGACAAAACAG+TGG	+	chr1_1:50050271-50050290	None:intergenic	35.0%
	ACGATATTTAACAGGTTTGC+CGG	-	chr1_1:50050291-50050310	Msa0026280:intron	35.0%
!!!	CATTGGAAGTGTTTTTGATC+CGG	-	chr1_1:50050336-50050355	Msa0026280:intron	35.0%
!	GTTTTTGATCCGGATACAAA+CGG	-	chr1_1:50050346-50050365	Msa0026280:intron	35.0%
!!	TGTTTGCTGTTATAACAGAC+GGG	+	chr1_1:50050703-50050722	None:intergenic	35.0%
!!	CTGTTTGCTGTTATAACAGA+CGG	+	chr1_1:50050704-50050723	None:intergenic	35.0%
	CATTCTTAAAACAAACACGC+CGG	-	chr1_1:50050939-50050958	Msa0026280:intron	35.0%
	ACAAATAAGAAGGTCCGTAT+CGG	+	chr1_1:50051113-50051132	None:intergenic	35.0%
	CGCCTAATTTATTTGTCCAT+TGG	+	chr1_1:50051157-50051176	None:intergenic	35.0%
!!	GAAAGCCAAATTCACTTTTG+AGG	-	chr1_1:50051323-50051342	Msa0026280:intron	35.0%
	TCCTTGTATAAGAAGTTGGA+GGG	+	chr1_1:50051471-50051490	None:intergenic	35.0%
	GAAGTCCTTGTATAAGAAGT+TGG	+	chr1_1:50051475-50051494	None:intergenic	35.0%
!!	TTGGGAGAATGACTTGTTAA+GGG	+	chr1_1:50051586-50051605	None:intergenic	35.0%
!!	TTTGGGAGAATGACTTGTTA+AGG	+	chr1_1:50051587-50051606	None:intergenic	35.0%
	TCATTCTCCCAAACAAAAAG+AGG	-	chr1_1:50051594-50051613	Msa0026280:intron	35.0%
	AATCAAAAGGAGGCTTATGT+GGG	+	chr1_1:50051675-50051694	None:intergenic	35.0%
	CTCTTTATCCAATCAAAAGG+AGG	+	chr1_1:50051685-50051704	None:intergenic	35.0%
!!!	AAATACGAGTTTTTGGGATG+TGG	+	chr1_1:50051754-50051773	None:intergenic	35.0%
	TTGATAGAAAAGTGGGGAAT+GGG	+	chr1_1:50051779-50051798	None:intergenic	35.0%
	TCCGAACTTGATAGAAAAGT+GGG	+	chr1_1:50051786-50051805	None:intergenic	35.0%
	TTCCGAACTTGATAGAAAAG+TGG	+	chr1_1:50051787-50051806	None:intergenic	35.0%
	TAAAGGTTGAGGATTACACT+TGG	+	chr1_1:50051872-50051891	None:intergenic	35.0%
	AGATAGGAATACTCTTTGGA+AGG	+	chr1_1:50051937-50051956	None:intergenic	35.0%
!!	TCCAAAGAGTATTCCTATCT+TGG	-	chr1_1:50051937-50051956	Msa0026280:intron	35.0%
	TCCAAGATAGGAATACTCTT+TGG	+	chr1_1:50051941-50051960	None:intergenic	35.0%
	AATGGAGGTTAATCCAAGAT+AGG	+	chr1_1:50051953-50051972	None:intergenic	35.0%
	GTTTGTAAACCAAAAGAGGA+TGG	+	chr1_1:50052032-50052051	None:intergenic	35.0%
	ATCGGAAGATAAATTGGTTG+AGG	+	chr1_1:50052064-50052083	None:intergenic	35.0%
!!	AAGTTTATGAGGCCATTTTG+AGG	-	chr1_1:50052130-50052149	Msa0026280:intron	35.0%
!!!	CTTTTTTTCCTGCTTATTCG+TGG	-	chr1_1:50052439-50052458	Msa0026280:intron	35.0%
	TAATCTAACCACGAATAAGC+AGG	+	chr1_1:50052450-50052469	None:intergenic	35.0%
!	GACTGACAGATTTCTGAAAA+TGG	+	chr1_1:50052483-50052502	None:intergenic	35.0%
	CATTGAATAATAGGGCTGAA+TGG	-	chr1_1:50052544-50052563	Msa0026280:intron	35.0%
	GCAAGTTATCATAAGCTACA+AGG	+	chr1_1:50052584-50052603	None:intergenic	35.0%
!	ATATTGGCCTAGGAAAAAAC+AGG	+	chr1_1:50052701-50052720	None:intergenic	35.0%
!	TTTTCCTAGGCCAATATTAG+AGG	-	chr1_1:50052704-50052723	Msa0026280:intron	35.0%
!	TTAACCTCTAATATTGGCCT+AGG	+	chr1_1:50052711-50052730	None:intergenic	35.0%
!	TAGAGGTTAATTTGATAGGG+GGG	-	chr1_1:50052721-50052740	Msa0026280:intron	35.0%
!!	AGCGAATTTGTTAGTAGCAT+AGG	-	chr1_1:50052746-50052765	Msa0026280:intron	35.0%
!!	ATGCTGAAGGAGTATTATGA+AGG	+	chr1_1:50052787-50052806	None:intergenic	35.0%
!	GTATTCTAGTGGTTTGAGTT+GGG	+	chr1_1:50052810-50052829	None:intergenic	35.0%
	TGTATTCTAGTGGTTTGAGT+TGG	+	chr1_1:50052811-50052830	None:intergenic	35.0%
	AAACCACTAGAATACACCAT+GGG	-	chr1_1:50052815-50052834	Msa0026280:intron	35.0%
	AGGCTCTTAAAGAGTCAATT+TGG	+	chr1_1:50052959-50052978	None:intergenic	35.0%
	TCATCTAAAAAGCTTGAGGA+AGG	-	chr1_1:50052986-50053005	Msa0026280:intron	35.0%
	CATCTAAAAAGCTTGAGGAA+GGG	-	chr1_1:50052987-50053006	Msa0026280:intron	35.0%
	ATCTAAAAAGCTTGAGGAAG+GGG	-	chr1_1:50052988-50053007	Msa0026280:intron	35.0%
	CCTAAGAGACAGTTGTAAAA+TGG	+	chr1_1:50053044-50053063	None:intergenic	35.0%
!	CCATTTTACAACTGTCTCTT+AGG	-	chr1_1:50053041-50053060	Msa0026280:intron	35.0%
!!	AAGTTTATGAGGCCATTTTG+AGG	-	chr1_1:50052130-50052149	Msa0026280:intron	35.0%
!!!	CTTTTTTTCCTGCTTATTCG+AGG	-	chr1_1:50052439-50052458	Msa0026280:intron	35.0%
	TAATCTAACCTCGAATAAGC+AGG	+	chr1_1:50053547-50053566	None:intergenic	35.0%
!	GACTGACAGATTTCTGAAAA+TGG	+	chr1_1:50052483-50052502	None:intergenic	35.0%
	CATTGAATAATAGGGCTGAA+TGG	-	chr1_1:50052544-50052563	Msa0026280:intron	35.0%
	GCAAGTTATCATAAGCTACA+AGG	+	chr1_1:50052584-50052603	None:intergenic	35.0%
!	ATATTGGCCTAGGAAAAAAC+AGG	+	chr1_1:50052701-50052720	None:intergenic	35.0%
!	TTTTCCTAGGCCAATATTAG+AGG	-	chr1_1:50052704-50052723	Msa0026280:intron	35.0%
!	TTAACCTCTAATATTGGCCT+AGG	+	chr1_1:50052711-50052730	None:intergenic	35.0%
!	TAGAGGTTAATTTGATAGGG+GGG	-	chr1_1:50052721-50052740	Msa0026280:intron	35.0%
!!	AGCGAATTTGTTAGTAGCAT+AGG	-	chr1_1:50052746-50052765	Msa0026280:intron	35.0%
!!	ATGCTGAAGGAGTATTATGA+AGG	+	chr1_1:50052787-50052806	None:intergenic	35.0%
!	GTATTCTAGTGGTTTGAGTT+GGG	+	chr1_1:50052810-50052829	None:intergenic	35.0%
	TGTATTCTAGTGGTTTGAGT+TGG	+	chr1_1:50052811-50052830	None:intergenic	35.0%
	AAACCACTAGAATACACCAT+GGG	-	chr1_1:50052815-50052834	Msa0026280:intron	35.0%
	AGGCTCTTAAAGAGTCAATT+TGG	+	chr1_1:50052959-50052978	None:intergenic	35.0%
	TCATCTAAAAAGCTTGAGGA+AGG	-	chr1_1:50052986-50053005	Msa0026280:intron	35.0%
	CATCTAAAAAGCTTGAGGAA+GGG	-	chr1_1:50052987-50053006	Msa0026280:intron	35.0%
	ATCTAAAAAGCTTGAGGAAG+GGG	-	chr1_1:50052988-50053007	Msa0026280:intron	35.0%
	CCTAAGAGACAGTTGTAAAA+TGG	+	chr1_1:50053044-50053063	None:intergenic	35.0%
!	CCATTTTACAACTGTCTCTT+AGG	-	chr1_1:50053041-50053060	Msa0026280:intron	35.0%
!	ATTTTCAAAAACTGCCCATG+AGG	+	chr1_1:50054221-50054240	None:intergenic	35.0%
	ACACTAATTCCCATGTTAAG+AGG	-	chr1_1:50054360-50054379	Msa0026280:intron	35.0%
	TAGTTAATGCAGAAAAGAGG+GGG	+	chr1_1:50054520-50054539	None:intergenic	35.0%
	CTAGTTAATGCAGAAAAGAG+GGG	+	chr1_1:50054521-50054540	None:intergenic	35.0%
	CCTAGTTAATGCAGAAAAGA+GGG	+	chr1_1:50054522-50054541	None:intergenic	35.0%
	TCCTAGTTAATGCAGAAAAG+AGG	+	chr1_1:50054523-50054542	None:intergenic	35.0%
	ACTATGGGAAGACTTACATT+GGG	+	chr1_1:50054879-50054898	None:intergenic	35.0%
	AGTGTTTAATCCCTTGACTA+TGG	-	chr1_1:50054930-50054949	Msa0026280:intron	35.0%
	TAAACGCGCATAACGTTTAT+AGG	-	chr1_1:50055076-50055095	Msa0026280:intron	35.0%
	TAGCCCTAATTCTCAAGAAT+GGG	+	chr1_1:50055498-50055517	None:intergenic	35.0%
	TTAGCCCTAATTCTCAAGAA+TGG	+	chr1_1:50055996-50056015	None:intergenic	35.0%
	GTGAGTTGTCTTGAGAATTA+GGG	-	chr1_1:50055528-50055547	Msa0026280:intron	35.0%
!!!	AATCTAAGCTGGTTTTGTGA+TGG	-	chr1_1:50055589-50055608	Msa0026280:intron	35.0%
!!!	ATCTAAGCTGGTTTTGTGAT+GGG	-	chr1_1:50055590-50055609	Msa0026280:intron	35.0%
	GACATAGTAGATAACCTAGA+AGG	-	chr1_1:50055629-50055648	Msa0026280:CDS	35.0%
	TGCATGTTGATGCTGTAAAT+CGG	+	chr1_1:50055750-50055769	None:intergenic	35.0%
!	CCTTTCTCAAGAGTGTAAAT+CGG	+	chr1_1:50055808-50055827	None:intergenic	35.0%
	GAAGAAATCAATGGAGAAGA+AGG	-	chr1_1:50055832-50055851	Msa0026280:intron	35.0%
	CCTAATTGTAATCAAGGTCT+TGG	+	chr1_1:50055879-50055898	None:intergenic	35.0%
	CCAAGACCTTGATTACAATT+AGG	-	chr1_1:50055876-50055895	Msa0026280:CDS	35.0%
	CTTCTGCCTAATTGTAATCA+AGG	+	chr1_1:50055885-50055904	None:intergenic	35.0%
!	GAAAAGGAGATTTTCTTCCT+CGG	-	chr1_1:50055912-50055931	Msa0026280:CDS	35.0%
!	GTGGGTTTTCTTGAGAATTA+GGG	+	chr1_1:50056003-50056022	None:intergenic	35.0%
!!	GGTTTGTTGTCTTGAGAATT+AGG	+	chr1_1:50056040-50056059	None:intergenic	35.0%
	AATTCTCAAGACAACAAACC+AGG	-	chr1_1:50056040-50056059	Msa0026280:intron	35.0%
!!	TTAGCCTTAATTCTCGAGAA+TGG	-	chr1_1:50056068-50056087	Msa0026280:intron	35.0%
!	TAGCCTTAATTCTCGAGAAT+GGG	-	chr1_1:50056069-50056088	Msa0026280:intron	35.0%
	GTCCAAGAAACTTTCTTAAC+TGG	-	chr1_1:50056144-50056163	Msa0026280:intron	35.0%
	ACAGTTAGATTGGACAAACA+TGG	-	chr1_1:50056678-50056697	Msa0026280:intron	35.0%
	TTAGATTGGACAAACATGGA+TGG	-	chr1_1:50056682-50056701	Msa0026280:intron	35.0%
!	GTTTTCCTTAACCAGAAGTT+AGG	-	chr1_1:50056714-50056733	Msa0026280:intron	35.0%
	ATGACAACAGTTACATTCAC+TGG	+	chr1_1:50056785-50056804	None:intergenic	35.0%
	TACTATGACTATTCTTGCTG+TGG	+	chr1_1:50056814-50056833	None:intergenic	35.0%
	CAATAGCTATGGTTCAAAGT+CGG	+	chr1_1:50056983-50057002	None:intergenic	35.0%
	CTTTACACATGTGGCATATT+TGG	+	chr1_1:50057138-50057157	None:intergenic	35.0%
	AAAGTGTGACTTTACACATG+TGG	+	chr1_1:50057147-50057166	None:intergenic	35.0%
!	TGTAAAGTCACACTTTTACC+TGG	-	chr1_1:50057151-50057170	Msa0026280:five_prime_UTR	35.0%
!	GTAAAGTCACACTTTTACCT+GGG	-	chr1_1:50057152-50057171	Msa0026280:five_prime_UTR	35.0%
	GGACAGTATTATTCTGTCTG+TGG	-	chr1_1:50048243-50048262	Msa0026280:three_prime_UTR	40.0%
	ACTACGGTGATTCTGATGAA+TGG	-	chr1_1:50048273-50048292	Msa0026280:three_prime_UTR	40.0%
	CTACGGTGATTCTGATGAAT+GGG	-	chr1_1:50048274-50048293	Msa0026280:three_prime_UTR	40.0%
	ACAACTACAACAACTAGTGG+TGG	-	chr1_1:50048514-50048533	Msa0026280:three_prime_UTR	40.0%
	TTACCAAGTCAAGAGAAAGC+TGG	-	chr1_1:50048575-50048594	Msa0026280:three_prime_UTR	40.0%
!!!	ATCCATTGCTTTTGGCTCTT+CGG	-	chr1_1:50049561-50049580	Msa0026280:intron	40.0%
	CTGACAAGTATTCATCAGCA+TGG	+	chr1_1:50049632-50049651	None:intergenic	40.0%
	CATGCTGATGAATACTTGTC+AGG	-	chr1_1:50049630-50049649	Msa0026280:intron	40.0%
!	CAAGTTCCTTTAAGTTCAGC+TGG	+	chr1_1:50049758-50049777	None:intergenic	40.0%
	TAGCTGACATTGGATCAAAG+GGG	-	chr1_1:50049812-50049831	Msa0026280:intron	40.0%
!	GCGTTGGTATTTGAGAAGTA+GGG	+	chr1_1:50049885-50049904	None:intergenic	40.0%
!	TGCGTTGGTATTTGAGAAGT+AGG	+	chr1_1:50049886-50049905	None:intergenic	40.0%
	ACTTCTCAAATACCAACGCA+AGG	-	chr1_1:50049886-50049905	Msa0026280:intron	40.0%
	CTTCTCAAATACCAACGCAA+GGG	-	chr1_1:50049887-50049906	Msa0026280:intron	40.0%
	ACACAAAATCCCGTGATTCA+TGG	-	chr1_1:50049910-50049929	Msa0026280:intron	40.0%
	AGACGATTACCATGAATCAC+GGG	+	chr1_1:50049922-50049941	None:intergenic	40.0%
	CAGACGATTACCATGAATCA+CGG	+	chr1_1:50049923-50049942	None:intergenic	40.0%
	GTTTATTGAAATCCTTGCGG+TGG	-	chr1_1:50050034-50050053	Msa0026280:intron	40.0%
	GCTGAAGTTTACGGTTTCAT+TGG	-	chr1_1:50050319-50050338	Msa0026280:intron	40.0%
	CTCAGTAGTTACTTCTGTTG+AGG	+	chr1_1:50050467-50050486	None:intergenic	40.0%
	GAGACAAAACAAGAACCTAC+AGG	-	chr1_1:50050549-50050568	Msa0026280:intron	40.0%
	GAGTTTATCATGCATCCTGT+AGG	+	chr1_1:50050567-50050586	None:intergenic	40.0%
	GGTCTCTTTCTGTCTGATAT+CGG	+	chr1_1:50050758-50050777	None:intergenic	40.0%
	AAACAGAAAAAACCTGAGGC+TGG	-	chr1_1:50050791-50050810	Msa0026280:intron	40.0%
!!!	CTGTTTCCTGCTGTTTTTTG+CGG	+	chr1_1:50050828-50050847	None:intergenic	40.0%
!	TTAATGGAGCTGCTTTGGTA+AGG	+	chr1_1:50050889-50050908	None:intergenic	40.0%
	TACCAAAGCAGCTCCATTAA+CGG	-	chr1_1:50050889-50050908	Msa0026280:intron	40.0%
!!!	CGGCGTGTTTGTTTTAAGAA+TGG	+	chr1_1:50050941-50050960	None:intergenic	40.0%
	TGGATGTTGAGTCGTATGAA+GGG	+	chr1_1:50050966-50050985	None:intergenic	40.0%
	TGATTCAATTTGCGGAGTAG+CGG	+	chr1_1:50051024-50051043	None:intergenic	40.0%
	AAATCAACCGGTAACCGATA+CGG	-	chr1_1:50051096-50051115	Msa0026280:intron	40.0%
!	TATTTGTCCATTGGGAGTGT+TGG	+	chr1_1:50051148-50051167	None:intergenic	40.0%
	AAGATTGCGTTCTGTGTGAA+GGG	+	chr1_1:50051275-50051294	None:intergenic	40.0%
	TTTCAGACATGTGTTACCTC+CGG	+	chr1_1:50051307-50051326	None:intergenic	40.0%
	TCTATCATGAAGAAGCTTCC+AGG	-	chr1_1:50051350-50051369	Msa0026280:intron	40.0%
	GAGAACGCAACAACTTTAGA+CGG	-	chr1_1:50051372-50051391	Msa0026280:intron	40.0%
	GAACTATATCAGAGGAGCAA+GGG	+	chr1_1:50051431-50051450	None:intergenic	40.0%
	AGAACTATATCAGAGGAGCA+AGG	+	chr1_1:50051432-50051451	None:intergenic	40.0%
	ACCCTCCAACTTCTTATACA+AGG	-	chr1_1:50051467-50051486	Msa0026280:intron	40.0%
	GTCCTTGTATAAGAAGTTGG+AGG	+	chr1_1:50051472-50051491	None:intergenic	40.0%
	CTTGTTAAGGGAGTTGTATG+CGG	+	chr1_1:50051574-50051593	None:intergenic	40.0%
!!	GAGACGTCCTCTTTTTGTTT+GGG	+	chr1_1:50051604-50051623	None:intergenic	40.0%
!!	AGTGCAATTGGTCGTTTTCT+TGG	+	chr1_1:50051626-50051645	None:intergenic	40.0%
	TTAATACTCCGGAGTGCAAT+TGG	+	chr1_1:50051638-50051657	None:intergenic	40.0%
	CAATCAAAAGGAGGCTTATG+TGG	+	chr1_1:50051676-50051695	None:intergenic	40.0%
!	CACATAAGCCTCCTTTTGAT+TGG	-	chr1_1:50051674-50051693	Msa0026280:intron	40.0%
!	TGGGGCAAATACGAGTTTTT+GGG	+	chr1_1:50051760-50051779	None:intergenic	40.0%
!	ATGGGGCAAATACGAGTTTT+TGG	+	chr1_1:50051761-50051780	None:intergenic	40.0%
	TGATAGAAAAGTGGGGAATG+GGG	+	chr1_1:50051778-50051797	None:intergenic	40.0%
	CTTGATAGAAAAGTGGGGAA+TGG	+	chr1_1:50051780-50051799	None:intergenic	40.0%
	CCGAACTTGATAGAAAAGTG+GGG	+	chr1_1:50051785-50051804	None:intergenic	40.0%
!!	CCCCACTTTTCTATCAAGTT+CGG	-	chr1_1:50051782-50051801	Msa0026280:intron	40.0%
!!	TTCAAGTGTAGGGGTGTTAA+AGG	+	chr1_1:50051889-50051908	None:intergenic	40.0%
	AGTATGGCACTTCAAGTGTA+GGG	+	chr1_1:50051899-50051918	None:intergenic	40.0%
	AAGTATGGCACTTCAAGTGT+AGG	+	chr1_1:50051900-50051919	None:intergenic	40.0%
!	TAGGAATACTCTTTGGAAGG+AGG	+	chr1_1:50051934-50051953	None:intergenic	40.0%
!	AAAAGAGGATGGTGGTTTAG+GGG	+	chr1_1:50052021-50052040	None:intergenic	40.0%
!	CAAAAGAGGATGGTGGTTTA+GGG	+	chr1_1:50052022-50052041	None:intergenic	40.0%
	TGTAAACCAAAAGAGGATGG+TGG	+	chr1_1:50052029-50052048	None:intergenic	40.0%
	AAATTGGTTGAGGTGGAGTT+TGG	+	chr1_1:50052054-50052073	None:intergenic	40.0%
	GGAAGATAAATTGGTTGAGG+TGG	+	chr1_1:50052061-50052080	None:intergenic	40.0%
!!	TTTATGAGGCCATTTTGAGG+AGG	-	chr1_1:50052133-50052152	Msa0026280:intron	40.0%
!!	ACTGACTCGATCCTTCAAAA+AGG	+	chr1_1:50052319-50052338	None:intergenic	40.0%
	TCATATTCACGCCCTTATTG+AGG	+	chr1_1:50052606-50052625	None:intergenic	40.0%
	CTTATCTTGCTTCAACACAC+TGG	+	chr1_1:50052639-50052658	None:intergenic	40.0%
!	AGAGGTTAATTTGATAGGGG+GGG	-	chr1_1:50052722-50052741	Msa0026280:intron	40.0%
	TAGTAGCATAGGTCAAACTC+TGG	-	chr1_1:50052757-50052776	Msa0026280:intron	40.0%
!!	CTGAAGGAGTATTATGAAGG+AGG	+	chr1_1:50052784-50052803	None:intergenic	40.0%
	CAAACCACTAGAATACACCA+TGG	-	chr1_1:50052814-50052833	Msa0026280:intron	40.0%
	TTTCCCATGGTGTATTCTAG+TGG	+	chr1_1:50052821-50052840	None:intergenic	40.0%
	AAAAACTACCTATGAGGCGT+CGG	+	chr1_1:50053118-50053137	None:intergenic	40.0%
!!	TTTATGAGGCCATTTTGAGG+AGG	-	chr1_1:50052133-50052152	Msa0026280:intron	40.0%
!!	ACTGACTCGATCCTTCAAAA+AGG	+	chr1_1:50052319-50052338	None:intergenic	40.0%
	TCATATTCACGCCCTTATTG+AGG	+	chr1_1:50052606-50052625	None:intergenic	40.0%
	CTTATCTTGCTTCAACACAC+TGG	+	chr1_1:50052639-50052658	None:intergenic	40.0%
!	AGAGGTTAATTTGATAGGGG+GGG	-	chr1_1:50052722-50052741	Msa0026280:intron	40.0%
	TAGTAGCATAGGTCAAACTC+TGG	-	chr1_1:50052757-50052776	Msa0026280:intron	40.0%
!!	CTGAAGGAGTATTATGAAGG+AGG	+	chr1_1:50052784-50052803	None:intergenic	40.0%
	CAAACCACTAGAATACACCA+TGG	-	chr1_1:50052814-50052833	Msa0026280:intron	40.0%
	TTTCCCATGGTGTATTCTAG+TGG	+	chr1_1:50052821-50052840	None:intergenic	40.0%
	TTGCCAAACTGTCTTCACTA+AGG	-	chr1_1:50054401-50054420	Msa0026280:intron	40.0%
	TGCCAAACTGTCTTCACTAA+GGG	-	chr1_1:50054402-50054421	Msa0026280:intron	40.0%
	AGTTAATGCAGAAAAGAGGG+GGG	+	chr1_1:50054519-50054538	None:intergenic	40.0%
!	CCCTCTTTTCTGCATTAACT+AGG	-	chr1_1:50054519-50054538	Msa0026280:intron	40.0%
	GACTATGGGAAGACTTACAT+TGG	+	chr1_1:50054880-50054899	None:intergenic	40.0%
	GTGCATGAACTTGAGAGATT+TGG	+	chr1_1:50054964-50054983	None:intergenic	40.0%
	GCATGTCACAAGTTAATGCA+GGG	+	chr1_1:50055018-50055037	None:intergenic	40.0%
	AGTTTGAATCTAGTTGCCGA+GGG	-	chr1_1:50055177-50055196	Msa0026280:CDS	40.0%
	CTACATATTACCTACCAACG+AGG	+	chr1_1:50055208-50055227	None:intergenic	40.0%
!	CTCGTTGGTAGGTAATATGT+AGG	-	chr1_1:50055206-50055225	Msa0026280:CDS	40.0%
	AGCTCAGAGAGAACTTATAG+AGG	+	chr1_1:50055234-50055253	None:intergenic	40.0%
	TAAGTTCTCTCTGAGCTTTG+AGG	-	chr1_1:50055237-50055256	Msa0026280:intron	40.0%
	GAATTAGGGCTAATCTGATC+TGG	-	chr1_1:50055506-50055525	Msa0026280:intron	40.0%
	GGTGAGTTGTCTTGAGAATT+AGG	-	chr1_1:50055527-50055546	Msa0026280:intron	40.0%
	GAATTAGGGCTAATCTAAGC+TGG	-	chr1_1:50055578-50055597	Msa0026280:intron	40.0%
!!	TTTTGTGATGGGAGAGTCAT+GGG	-	chr1_1:50055601-50055620	Msa0026280:intron	40.0%
	TCTTTCAAATTCGGCCTTCT+AGG	+	chr1_1:50055646-50055665	None:intergenic	40.0%
	CGGCACACAAGAAAAAAACA+AGG	+	chr1_1:50055692-50055711	None:intergenic	40.0%
!	TTGGAGCCTATTGATTACAG+TGG	+	chr1_1:50055715-50055734	None:intergenic	40.0%
	AAATCGGCTACAGCATACTT+TGG	+	chr1_1:50055734-50055753	None:intergenic	40.0%
	CCGATTTACACTCTTGAGAA+AGG	-	chr1_1:50055805-50055824	Msa0026280:intron	40.0%
	AAATCAATGGAGAAGAAGGG+AGG	-	chr1_1:50055836-50055855	Msa0026280:intron	40.0%
	AATCAATGGAGAAGAAGGGA+GGG	-	chr1_1:50055837-50055856	Msa0026280:intron	40.0%
!	ATTTTCTTCCTCGGTCTTCT+AGG	-	chr1_1:50055921-50055940	Msa0026280:CDS	40.0%
!!	TTTTGTGATGGGAGAGTCAT+GGG	+	chr1_1:50055601-50055620	None:intergenic	40.0%
!!!	ATCTGACCTGGTTTTGTGAT+GGG	+	chr1_1:50055977-50055996	None:intergenic	40.0%
!!!	AATCTGACCTGGTTTTGTGA+TGG	+	chr1_1:50055978-50055997	None:intergenic	40.0%
!!	GGTGGGTTTTCTTGAGAATT+AGG	+	chr1_1:50056004-50056023	None:intergenic	40.0%
	AATTCTCAAGAAAACCCACC+AGG	-	chr1_1:50056004-50056023	Msa0026280:intron	40.0%
	GAATTAAGGCTAATCTGACC+TGG	+	chr1_1:50056061-50056080	None:intergenic	40.0%
	AGTCCCATTCTCGAGAATTA+AGG	+	chr1_1:50056075-50056094	None:intergenic	40.0%
	AGAAAAGAATCCCTTCCACT+GGG	-	chr1_1:50056121-50056140	Msa0026280:intron	40.0%
	CACAACATCAAACTTCACCT+CGG	-	chr1_1:50056236-50056255	Msa0026280:intron	40.0%
	ATTCGCTGGTCATGATAAGA+AGG	+	chr1_1:50056277-50056296	None:intergenic	40.0%
	TAGATGAGATAGTCATTCGC+TGG	+	chr1_1:50056291-50056310	None:intergenic	40.0%
	TTGCTTCGTTGTTCAGAAGA+AGG	-	chr1_1:50056459-50056478	Msa0026280:intron	40.0%
	GATGAGAATAACGATGCAGT+AGG	-	chr1_1:50056496-50056515	Msa0026280:intron	40.0%
	CAAACATGGATGGAAGATTG+AGG	-	chr1_1:50056692-50056711	Msa0026280:intron	40.0%
	CTTAACCAGAAGTTAGGCAT+GGG	-	chr1_1:50056720-50056739	Msa0026280:intron	40.0%
	ATGGTTCAAAGTCGGTAACT+CGG	+	chr1_1:50056975-50056994	None:intergenic	40.0%
	TGGAGATGCTTCTGGTAAGA+AGG	-	chr1_1:50048534-50048553	Msa0026280:three_prime_UTR	45.0%
	AGACCAGCTTTCTCTTGACT+TGG	+	chr1_1:50048581-50048600	None:intergenic	45.0%
!	GGATGAATAGCTTTGCGCTT+AGG	+	chr1_1:50048993-50049012	None:intergenic	45.0%
	AAAGCAATGGATGCTGGTAG+TGG	+	chr1_1:50049553-50049572	None:intergenic	45.0%
!	CTACCAGCATCCATTGCTTT+TGG	-	chr1_1:50049553-50049572	Msa0026280:intron	45.0%
	CAAATACCCTTCTACCTGCA+GGG	-	chr1_1:50049584-50049603	Msa0026280:intron	45.0%
	AGCTGGCCAATCTAGACTAT+TGG	+	chr1_1:50049741-50049760	None:intergenic	45.0%
!	GATTGGCCAGCTGAACTTAA+AGG	-	chr1_1:50049749-50049768	Msa0026280:intron	45.0%
!	CAAGATCATTTTCCACCGCA+AGG	+	chr1_1:50050049-50050068	None:intergenic	45.0%
	CAAGATCATTTGCCACCTCA+AGG	+	chr1_1:50050199-50050218	None:intergenic	45.0%
	CCGTAAACTTCAGCAAAGTC+CGG	+	chr1_1:50050313-50050332	None:intergenic	45.0%
	CCGGACTTTGCTGAAGTTTA+CGG	-	chr1_1:50050310-50050329	Msa0026280:intron	45.0%
	TTTCCTTCAGCTTCTGCACA+TGG	+	chr1_1:50050372-50050391	None:intergenic	45.0%
	TGTGCAGAAGCTGAAGGAAA+TGG	-	chr1_1:50050372-50050391	Msa0026280:intron	45.0%
	AACAAAAACTCGCGATCAGC+AGG	-	chr1_1:50050644-50050663	Msa0026280:intron	45.0%
	ACAAAAACTCGCGATCAGCA+GGG	-	chr1_1:50050645-50050664	Msa0026280:intron	45.0%
	CAGCAGGGAACAATTACATC+AGG	-	chr1_1:50050660-50050679	Msa0026280:intron	45.0%
!	TGTTATAACAGACGGGCTTC+TGG	+	chr1_1:50050696-50050715	None:intergenic	45.0%
!!!	TTCTGTTTTTTGCTGCTGGC+TGG	+	chr1_1:50050779-50050798	None:intergenic	45.0%
	ACAGAACCGCAAAAAACAGC+AGG	-	chr1_1:50050819-50050838	Msa0026280:intron	45.0%
	ATCCGTTAATGGAGCTGCTT+TGG	+	chr1_1:50050894-50050913	None:intergenic	45.0%
!	AGCAGCTCCATTAACGGATA+AGG	-	chr1_1:50050895-50050914	Msa0026280:intron	45.0%
	GGATGTTGAGTCGTATGAAG+GGG	+	chr1_1:50050965-50050984	None:intergenic	45.0%
	GTGGATGTTGAGTCGTATGA+AGG	+	chr1_1:50050967-50050986	None:intergenic	45.0%
!!	TTAAGGTTTTGTCGTGGAGG+TGG	+	chr1_1:50050986-50051005	None:intergenic	45.0%
!!	CGATTAAGGTTTTGTCGTGG+AGG	+	chr1_1:50050989-50051008	None:intergenic	45.0%
!!	AGGCGATTAAGGTTTTGTCG+TGG	+	chr1_1:50050992-50051011	None:intergenic	45.0%
!!	GTATCGGTTACCGGTTGATT+TGG	+	chr1_1:50051097-50051116	None:intergenic	45.0%
	TGGGGCTGAGACAAATAAGA+AGG	+	chr1_1:50051123-50051142	None:intergenic	45.0%
!!	TCCATTGGGAGTGTTGGATT+GGG	+	chr1_1:50051142-50051161	None:intergenic	45.0%
	ATTCACTGTGTTTGCTTCCG+AGG	+	chr1_1:50051225-50051244	None:intergenic	45.0%
	GTGTGAAGGGATGTTGGAAT+CGG	+	chr1_1:50051262-50051281	None:intergenic	45.0%
	CAAGATTGCGTTCTGTGTGA+AGG	+	chr1_1:50051276-50051295	None:intergenic	45.0%
	CTAAAGTTGTTGCGTTCTCC+TGG	+	chr1_1:50051371-50051390	None:intergenic	45.0%
	TTCCTCCATTTGGAAAAGCC+CGG	+	chr1_1:50051400-50051419	None:intergenic	45.0%
	TATATCAGAGGAGCAAGGGA+GGG	+	chr1_1:50051427-50051446	None:intergenic	45.0%
	AGAGGCGAGAACTATATCAG+AGG	+	chr1_1:50051439-50051458	None:intergenic	45.0%
!	GTTGGAGGGTATAATGCTAG+AGG	+	chr1_1:50051457-50051476	None:intergenic	45.0%
!!	GGAAGAGAGTGGTGCTTTTT+CGG	+	chr1_1:50051499-50051518	None:intergenic	45.0%
!!	CGGATTTGGAAGGCTTTAGA+GGG	+	chr1_1:50051554-50051573	None:intergenic	45.0%
	GAGTTGTATGCGGATTTGGA+AGG	+	chr1_1:50051564-50051583	None:intergenic	45.0%
	AAGGGAGTTGTATGCGGATT+TGG	+	chr1_1:50051568-50051587	None:intergenic	45.0%
!	GGAGACGTCCTCTTTTTGTT+TGG	+	chr1_1:50051605-50051624	None:intergenic	45.0%
	GAAAACGACCAATTGCACTC+CGG	-	chr1_1:50051627-50051646	Msa0026280:intron	45.0%
	CTTGGGGACTCTTAATACTC+CGG	+	chr1_1:50051649-50051668	None:intergenic	45.0%
!!	TGTAGGGGTGTTAAAGGTTG+AGG	+	chr1_1:50051883-50051902	None:intergenic	45.0%
	GTATGGCACTTCAAGTGTAG+GGG	+	chr1_1:50051898-50051917	None:intergenic	45.0%
!	TACTCTTTGGAAGGAGGTGT+TGG	+	chr1_1:50051928-50051947	None:intergenic	45.0%
	CACTAGCGAAATGGAAATGG+AGG	+	chr1_1:50051968-50051987	None:intergenic	45.0%
	GCTCACTAGCGAAATGGAAA+TGG	+	chr1_1:50051971-50051990	None:intergenic	45.0%
	ACTTGAGCTCACTAGCGAAA+TGG	+	chr1_1:50051977-50051996	None:intergenic	45.0%
!	CCAAAAGAGGATGGTGGTTT+AGG	+	chr1_1:50052023-50052042	None:intergenic	45.0%
!	CCTAAACCACCATCCTCTTT+TGG	-	chr1_1:50052020-50052039	Msa0026280:intron	45.0%
	TTTCCTAGTTATGTGCGCAG+AGG	+	chr1_1:50052112-50052131	None:intergenic	45.0%
	TTTCCTAGTTATGTGCGCAG+AGG	+	chr1_1:50052112-50052131	None:intergenic	45.0%
	CTCCCTTAGTGAAGACAGTT+TGG	+	chr1_1:50054407-50054426	None:intergenic	45.0%
	TTAATGCAGAAAAGAGGGGG+GGG	+	chr1_1:50054517-50054536	None:intergenic	45.0%
	GTTAATGCAGAAAAGAGGGG+GGG	+	chr1_1:50054518-50054537	None:intergenic	45.0%
	GGATTCAGAGCCATAGTCAA+GGG	+	chr1_1:50054943-50054962	None:intergenic	45.0%
	TGGATTCAGAGCCATAGTCA+AGG	+	chr1_1:50054944-50054963	None:intergenic	45.0%
	GGCATGTCACAAGTTAATGC+AGG	+	chr1_1:50055019-50055038	None:intergenic	45.0%
	CGGCAACTAGATTCAAACTC+AGG	+	chr1_1:50055176-50055195	None:intergenic	45.0%
	GAGTTTGAATCTAGTTGCCG+AGG	-	chr1_1:50055176-50055195	Msa0026280:CDS	45.0%
	GTTTGAATCTAGTTGCCGAG+GGG	-	chr1_1:50055178-50055197	Msa0026280:CDS	45.0%
!!	TTTTCGCAAGTTGAGTCCCA+GGG	+	chr1_1:50055282-50055301	None:intergenic	45.0%
	TGTTAGCAGTCAACACTCAG+TGG	-	chr1_1:50055465-50055484	Msa0026280:intron	45.0%
	GAATTAGGGCTAATCTGACC+TGG	-	chr1_1:50055542-50055561	Msa0026280:intron	45.0%
!	GTGGGCTGTCTTGAGAATTA+GGG	-	chr1_1:50055564-50055583	Msa0026280:intron	45.0%
!!	GTTTTGTGATGGGAGAGTCA+TGG	-	chr1_1:50055600-50055619	Msa0026280:intron	45.0%
	GTCGTCGCGTCTTTCAAATT+CGG	+	chr1_1:50055655-50055674	None:intergenic	45.0%
!	GAGCCTATTGATTACAGTGG+CGG	+	chr1_1:50055712-50055731	None:intergenic	45.0%
!	GTTTGGAGTTGGAGGCAAAT+TGG	+	chr1_1:50055784-50055803	None:intergenic	45.0%
!	TGTAAATCGGCGTTTGGAGT+TGG	+	chr1_1:50055795-50055814	None:intergenic	45.0%
!	CAAGAGTGTAAATCGGCGTT+TGG	+	chr1_1:50055801-50055820	None:intergenic	45.0%
	GTAGATAACCTAGAAGACCG+AGG	+	chr1_1:50055932-50055951	None:intergenic	45.0%
!!	GTTTTGTGATGGGAGAGTCA+TGG	+	chr1_1:50055600-50055619	None:intergenic	45.0%
	GAATTAGGGCTAATCTGACC+TGG	+	chr1_1:50055542-50055561	None:intergenic	45.0%
	TTCTGTTAGCAGCCAACACT+CGG	+	chr1_1:50056105-50056124	None:intergenic	45.0%
	CAGAAAAGAATCCCTTCCAC+TGG	-	chr1_1:50056120-50056139	Msa0026280:intron	45.0%
	GAAAAGAATCCCTTCCACTG+GGG	-	chr1_1:50056122-50056141	Msa0026280:intron	45.0%
	CTAGTCATCTGCTTCAATCC+CGG	-	chr1_1:50056308-50056327	Msa0026280:intron	45.0%
	TCTATATTCGGCCTTAGTCC+GGG	+	chr1_1:50056329-50056348	None:intergenic	45.0%
	CTCTATATTCGGCCTTAGTC+CGG	+	chr1_1:50056330-50056349	None:intergenic	45.0%
	CTACTTTGCTAGTGCTCAAG+TGG	+	chr1_1:50056566-50056585	None:intergenic	45.0%
!	CCATGCCTAACTTCTGGTTA+AGG	+	chr1_1:50056722-50056741	None:intergenic	45.0%
	CCTTAACCAGAAGTTAGGCA+TGG	-	chr1_1:50056719-50056738	Msa0026280:intron	45.0%
	AGTTGCACTCAGCTGTAAAG+TGG	-	chr1_1:50056755-50056774	Msa0026280:CDS	45.0%
!	GTTGGTGAACTATGAGTTGC+TGG	+	chr1_1:50056953-50056972	None:intergenic	45.0%
	TTCAAAGTCGGTAACTCGGT+TGG	+	chr1_1:50056971-50056990	None:intergenic	45.0%
	TGTCTGTGGGCACAACACTA+CGG	-	chr1_1:50048257-50048276	Msa0026280:three_prime_UTR	50.0%
!	ACTAGTGGTGGAGATGCTTC+TGG	-	chr1_1:50048526-50048545	Msa0026280:three_prime_UTR	50.0%
!	ATAGCTTTGCGCTTAGGACG+AGG	+	chr1_1:50048987-50049006	None:intergenic	50.0%
	GAGCCAAAAGCAATGGATGC+TGG	+	chr1_1:50049559-50049578	None:intergenic	50.0%
	TGCCGAAGAGCCAAAAGCAA+TGG	+	chr1_1:50049566-50049585	None:intergenic	50.0%
	GCAAATACCCTTCTACCTGC+AGG	-	chr1_1:50049583-50049602	Msa0026280:intron	50.0%
	GACATACCCTGCAGGTAGAA+GGG	+	chr1_1:50049593-50049612	None:intergenic	50.0%
	AGACATACCCTGCAGGTAGA+AGG	+	chr1_1:50049594-50049613	None:intergenic	50.0%
	TCAAAGGGGATCAGCAACAG+CGG	-	chr1_1:50049826-50049845	Msa0026280:intron	50.0%
	ATCAGCAACAGCGGTCTTAG+TGG	-	chr1_1:50049835-50049854	Msa0026280:intron	50.0%
!	GGATTTTGTGTCCCTTGCGT+TGG	+	chr1_1:50049901-50049920	None:intergenic	50.0%
	TCATGGTAATCGTCTGCGAC+AGG	-	chr1_1:50049927-50049946	Msa0026280:intron	50.0%
	TGCACATGGCCGTTTGTATC+CGG	+	chr1_1:50050358-50050377	None:intergenic	50.0%
	GTTCTGTATATGCCAGCCTC+AGG	+	chr1_1:50050806-50050825	None:intergenic	50.0%
!	ATGGAGCTGCTTTGGTAAGG+CGG	+	chr1_1:50050886-50050905	None:intergenic	50.0%
!!	GAGGGTGCCTTATCCGTTAA+TGG	+	chr1_1:50050905-50050924	None:intergenic	50.0%
!	TAACGGATAAGGCACCCTCT+CGG	-	chr1_1:50050906-50050925	Msa0026280:intron	50.0%
!!	AATGGTGTTGGTGTCCGAGA+GGG	+	chr1_1:50050923-50050942	None:intergenic	50.0%
	GGAGTTAGTGGAGGCGATTA+AGG	+	chr1_1:50051003-50051022	None:intergenic	50.0%
!!	AGAAGGTCCGTATCGGTTAC+CGG	+	chr1_1:50051106-50051125	None:intergenic	50.0%
!!	CCATTGGGAGTGTTGGATTG+GGG	+	chr1_1:50051141-50051160	None:intergenic	50.0%
!!	GTCCATTGGGAGTGTTGGAT+TGG	+	chr1_1:50051143-50051162	None:intergenic	50.0%
	GCAAGGATTGTTGAGGTGGA+TGG	+	chr1_1:50051198-50051217	None:intergenic	50.0%
	TGTGGCAAGGATTGTTGAGG+TGG	+	chr1_1:50051202-50051221	None:intergenic	50.0%
	AGGTGTGGCAAGGATTGTTG+AGG	+	chr1_1:50051205-50051224	None:intergenic	50.0%
	CAACAATCCTTGCCACACCT+CGG	-	chr1_1:50051205-50051224	Msa0026280:intron	50.0%
	CGTTCTGTGTGAAGGGATGT+TGG	+	chr1_1:50051268-50051287	None:intergenic	50.0%
	ACGCAATCTTGAGAAGCCTC+CGG	-	chr1_1:50051285-50051304	Msa0026280:intron	50.0%
	GCAACAACTTTAGACGGTGC+CGG	-	chr1_1:50051378-50051397	Msa0026280:intron	50.0%
	CAACAACTTTAGACGGTGCC+GGG	-	chr1_1:50051379-50051398	Msa0026280:intron	50.0%
!!!	GGAGGGTGTTTTCCTCCATT+TGG	+	chr1_1:50051410-50051429	None:intergenic	50.0%
	CTATATCAGAGGAGCAAGGG+AGG	+	chr1_1:50051428-50051447	None:intergenic	50.0%
	CGTTGGAAGTTGGAAGAGAG+TGG	+	chr1_1:50051510-50051529	None:intergenic	50.0%
!	AGATGTGTGGCGTTGGAAGT+TGG	+	chr1_1:50051520-50051539	None:intergenic	50.0%
	TAGACGAAGATGTGTGGCGT+TGG	+	chr1_1:50051527-50051546	None:intergenic	50.0%
	GGTCTCTAGACGAAGATGTG+TGG	+	chr1_1:50051533-50051552	None:intergenic	50.0%
!	GCGGATTTGGAAGGCTTTAG+AGG	+	chr1_1:50051555-50051574	None:intergenic	50.0%
	AGGCTTATGTGGGTGACTTG+GGG	+	chr1_1:50051665-50051684	None:intergenic	50.0%
	GAGGCTTATGTGGGTGACTT+GGG	+	chr1_1:50051666-50051685	None:intergenic	50.0%
!!!	TTTTGGGATGTGGCTTGGAG+AGG	+	chr1_1:50051744-50051763	None:intergenic	50.0%
!!!	CGAGTTTTTGGGATGTGGCT+TGG	+	chr1_1:50051749-50051768	None:intergenic	50.0%
!!	GTGGAGGGATTTGGTGTCTT+TGG	+	chr1_1:50051829-50051848	None:intergenic	50.0%
	GGTTGAGGATTACACTTGGC+CGG	+	chr1_1:50051868-50051887	None:intergenic	50.0%
!!	GAGGTGTTGGTGGAGAAGTA+TGG	+	chr1_1:50051915-50051934	None:intergenic	50.0%
!!	TCTTTGGAAGGAGGTGTTGG+TGG	+	chr1_1:50051925-50051944	None:intergenic	50.0%
	CTTCCTCTGCGCACATAACT+AGG	-	chr1_1:50052106-50052125	Msa0026280:intron	50.0%
!!!	GGAAGCGCCTGTTTTTTCCT+AGG	-	chr1_1:50052691-50052710	Msa0026280:intron	50.0%
!!	GGTTTGAGTTGGGATGCTGA+AGG	+	chr1_1:50052800-50052819	None:intergenic	50.0%
	CTTCCTCTGCGCACATAACT+AGG	-	chr1_1:50052106-50052125	Msa0026280:intron	50.0%
!!!	GGAAGCGCCTGTTTTTTCCT+AGG	-	chr1_1:50052691-50052710	Msa0026280:intron	50.0%
!!	GGTTTGAGTTGGGATGCTGA+AGG	+	chr1_1:50052800-50052819	None:intergenic	50.0%
	AAAAACTGCCCATGAGGCGT+CGG	+	chr1_1:50054215-50054234	None:intergenic	50.0%
	TAATGCAGAAAAGAGGGGGG+GGG	+	chr1_1:50054516-50054535	None:intergenic	50.0%
!	GGCTAGACAAGTTGACAGTG+AGG	+	chr1_1:50054680-50054699	None:intergenic	50.0%
	TTCTCCGATCCTAGTAACCC+TGG	-	chr1_1:50055262-50055281	Msa0026280:intron	50.0%
	TCTCCGATCCTAGTAACCCT+GGG	-	chr1_1:50055263-50055282	Msa0026280:intron	50.0%
	AGTCCCAGGGTTACTAGGAT+CGG	+	chr1_1:50055269-50055288	None:intergenic	50.0%
	AGTTGAGTCCCAGGGTTACT+AGG	+	chr1_1:50055274-50055293	None:intergenic	50.0%
!!	GTTTTCGCAAGTTGAGTCCC+AGG	+	chr1_1:50055283-50055302	None:intergenic	50.0%
	TTAGGGCTAATCTGACCTGG+TGG	-	chr1_1:50055545-50055564	Msa0026280:intron	50.0%
	TAGGGCTAATCTGACCTGGT+GGG	-	chr1_1:50055546-50055565	Msa0026280:intron	50.0%
	AATTCTCAAGACAGCCCACC+AGG	+	chr1_1:50055563-50055582	None:intergenic	50.0%
!!	GGTGGGCTGTCTTGAGAATT+AGG	-	chr1_1:50055563-50055582	Msa0026280:intron	50.0%
	ATTTGAAAGACGCGACGACG+AGG	-	chr1_1:50055656-50055675	Msa0026280:CDS	50.0%
	GTGCCGCCACTGTAATCAAT+AGG	-	chr1_1:50055706-50055725	Msa0026280:intron	50.0%
	AGTTGGAGGCAAATTGGCGT+TGG	+	chr1_1:50055778-50055797	None:intergenic	50.0%
!	AAATCGGCGTTTGGAGTTGG+AGG	+	chr1_1:50055792-50055811	None:intergenic	50.0%
	AATGGAGAAGAAGGGAGGGA+AGG	-	chr1_1:50055841-50055860	Msa0026280:intron	50.0%
!!	AGGCAGAAGTGCTCACGAAA+AGG	-	chr1_1:50055896-50055915	Msa0026280:CDS	50.0%
	GACTCTCCCATCACAAAACC+AGG	-	chr1_1:50055968-50055987	Msa0026280:intron	50.0%
	GAATTAGGGCTCATCTGACC+TGG	+	chr1_1:50056025-50056044	None:intergenic	50.0%
	GGACTAAATCCACCGAGTGT+TGG	-	chr1_1:50056090-50056109	Msa0026280:intron	50.0%
	TTTCTTGGACCCCAGTGGAA+GGG	+	chr1_1:50056134-50056153	None:intergenic	50.0%
	GAAAGTTTCTTGGACCCCAG+TGG	+	chr1_1:50056139-50056158	None:intergenic	50.0%
	GGCAGAGAATCAAGAAACCG+AGG	+	chr1_1:50056256-50056275	None:intergenic	50.0%
	TCTGCTTCAATCCCGGACTA+AGG	-	chr1_1:50056315-50056334	Msa0026280:intron	50.0%
	ACACTCCCATGCCTAACTTC+TGG	+	chr1_1:50056728-50056747	None:intergenic	50.0%
	TGAAAAGGGTCATTTCGCCC+AGG	+	chr1_1:50057172-50057191	None:intergenic	50.0%
!!	GCTGGTAGTGGCACCAAAAC+TGG	+	chr1_1:50049541-50049560	None:intergenic	55.0%
	TACCTGCAGGGTATGTCTCG+TGG	-	chr1_1:50049596-50049615	Msa0026280:intron	55.0%
	ACCTGCAGGGTATGTCTCGT+GGG	-	chr1_1:50049597-50049616	Msa0026280:intron	55.0%
	CTTTGGTAAGGCGGAGGTTG+AGG	+	chr1_1:50050877-50050896	None:intergenic	55.0%
!!	GAATGGTGTTGGTGTCCGAG+AGG	+	chr1_1:50050924-50050943	None:intergenic	55.0%
	GTTGAGTCGTATGAAGGGGC+CGG	+	chr1_1:50050961-50050980	None:intergenic	55.0%
!	TTGCGGAGTAGCGGAGTTAG+TGG	+	chr1_1:50051015-50051034	None:intergenic	55.0%
!!	CGCGGTTTGGTGCATTTGGA+GGG	+	chr1_1:50051069-50051088	None:intergenic	55.0%
	CCTCCAAATGCACCAAACCG+CGG	-	chr1_1:50051067-50051086	Msa0026280:intron	55.0%
!!	ATGCCGCGGTTTGGTGCATT+TGG	+	chr1_1:50051073-50051092	None:intergenic	55.0%
!	TGATTTGGCATGCCGCGGTT+TGG	+	chr1_1:50051082-50051101	None:intergenic	55.0%
	CCCCAATCCAACACTCCCAA+TGG	-	chr1_1:50051138-50051157	Msa0026280:intron	55.0%
	TTTGCTTCCGAGGTGTGGCA+AGG	+	chr1_1:50051215-50051234	None:intergenic	55.0%
	CTGTGTTTGCTTCCGAGGTG+TGG	+	chr1_1:50051220-50051239	None:intergenic	55.0%
	CAATCTTGAGAAGCCTCCGG+AGG	-	chr1_1:50051288-50051307	Msa0026280:intron	55.0%
	CAGACATGTGTTACCTCCGG+AGG	+	chr1_1:50051304-50051323	None:intergenic	55.0%
!	TGCCGGGCTTTTCCAAATGG+AGG	-	chr1_1:50051395-50051414	Msa0026280:intron	55.0%
	GGAGGCTTATGTGGGTGACT+TGG	+	chr1_1:50051667-50051686	None:intergenic	55.0%
!	GGATGGTGGTTTAGGGGTGA+GGG	+	chr1_1:50052015-50052034	None:intergenic	55.0%
!	AGGATGGTGGTTTAGGGGTG+AGG	+	chr1_1:50052016-50052035	None:intergenic	55.0%
	TCACTAAGCCGACGCCTCAT+AGG	-	chr1_1:50053107-50053126	Msa0026280:intron	55.0%
	ATCACTAAGCCGACGCCTCA+TGG	-	chr1_1:50053106-50053125	Msa0026280:intron	55.0%
	TCACTAAGCCGACGCCTCAT+GGG	-	chr1_1:50053107-50053126	Msa0026280:intron	55.0%
	AATGCAGAAAAGAGGGGGGG+GGG	+	chr1_1:50054515-50054534	None:intergenic	55.0%
	TGAATCTAGTTGCCGAGGGG+AGG	-	chr1_1:50055181-50055200	Msa0026280:CDS	55.0%
	TAGGGCTCATCTGACCTGGT+GGG	+	chr1_1:50056021-50056040	None:intergenic	55.0%
	TTAGGGCTCATCTGACCTGG+TGG	+	chr1_1:50056022-50056041	None:intergenic	55.0%
	TGTTAGCAGCCAACACTCGG+TGG	+	chr1_1:50056102-50056121	None:intergenic	55.0%
	GTTTCTTGGACCCCAGTGGA+AGG	+	chr1_1:50056135-50056154	None:intergenic	55.0%
	TGCGCTTAGGACGAGGAGGA+GGG	+	chr1_1:50048980-50048999	None:intergenic	60.0%
	TTGCGCTTAGGACGAGGAGG+AGG	+	chr1_1:50048981-50049000	None:intergenic	60.0%
	GCTTTGCGCTTAGGACGAGG+AGG	+	chr1_1:50048984-50049003	None:intergenic	60.0%
	TCCCACGAGACATACCCTGC+AGG	+	chr1_1:50049601-50049620	None:intergenic	60.0%
	CGGCCATGTGCAGAAGCTGA+AGG	-	chr1_1:50050366-50050385	Msa0026280:intron	60.0%
	GAGGTTGAGGCTGGGGTATG+CGG	+	chr1_1:50050864-50050883	None:intergenic	60.0%
	TAAGGCGGAGGTTGAGGCTG+GGG	+	chr1_1:50050871-50050890	None:intergenic	60.0%
	GTAAGGCGGAGGTTGAGGCT+GGG	+	chr1_1:50050872-50050891	None:intergenic	60.0%
!	GAGCTGCTTTGGTAAGGCGG+AGG	+	chr1_1:50050883-50050902	None:intergenic	60.0%
!	CGGAGTAGCGGAGTTAGTGG+AGG	+	chr1_1:50051012-50051031	None:intergenic	60.0%
!!	CCGCGGTTTGGTGCATTTGG+AGG	+	chr1_1:50051070-50051089	None:intergenic	60.0%
!!	CCGGTTGATTTGGCATGCCG+CGG	+	chr1_1:50051087-50051106	None:intergenic	60.0%
	CCGCGGCATGCCAAATCAAC+CGG	-	chr1_1:50051084-50051103	Msa0026280:intron	60.0%
!!	CGGTGCCGGGCTTTTCCAAA+TGG	-	chr1_1:50051392-50051411	Msa0026280:intron	60.0%
!	GTCGCGTTGGTGGAGGGATT+TGG	+	chr1_1:50051838-50051857	None:intergenic	60.0%
!	GCATGTGTCGCGTTGGTGGA+GGG	+	chr1_1:50051844-50051863	None:intergenic	60.0%
!	TGCATGTGTCGCGTTGGTGG+AGG	+	chr1_1:50051845-50051864	None:intergenic	60.0%
	CACCAACGCGACACATGCAC+CGG	-	chr1_1:50051846-50051865	Msa0026280:intron	60.0%
	AGGGGTGAGGGATGTCAGAG+TGG	+	chr1_1:50052003-50052022	None:intergenic	60.0%
	ATGCAGAAAAGAGGGGGGGG+GGG	+	chr1_1:50054514-50054533	None:intergenic	60.0%
	TACCAACGAGGTCCTCCCCT+CGG	+	chr1_1:50055196-50055215	None:intergenic	60.0%
	GGAGAAGAAGGGAGGGAAGG+AGG	-	chr1_1:50055844-50055863	Msa0026280:intron	60.0%
	GGTAAGGCGGAGGTTGAGGC+TGG	+	chr1_1:50050873-50050892	None:intergenic	65.0%
	CGGTGCATGTGTCGCGTTGG+TGG	+	chr1_1:50051848-50051867	None:intergenic	65.0%
	TGCAGAAAAGAGGGGGGGGG+GGG	+	chr1_1:50054513-50054532	None:intergenic	65.0%
	GAGGGGAGGACCTCGTTGGT+AGG	-	chr1_1:50055195-50055214	Msa0026280:CDS	65.0%
	GGCCGGTGCATGTGTCGCGT+TGG	+	chr1_1:50051851-50051870	None:intergenic	70.0%
	AGAAAAGAGGGGGGGGGGGG+GGG	+	chr1_1:50054510-50054529	None:intergenic	70.0%
	CAGAAAAGAGGGGGGGGGGG+GGG	+	chr1_1:50054511-50054530	None:intergenic	70.0%
	GCAGAAAAGAGGGGGGGGGG+GGG	+	chr1_1:50054512-50054531	None:intergenic	70.0%
	TGCCGAGGGGAGGACCTCGT+TGG	-	chr1_1:50055191-50055210	Msa0026280:CDS	70.0%
	AAAAGAGGGGGGGGGGGGGG+GGG	+	chr1_1:50054508-50054527	None:intergenic	75.0%
	GAAAAGAGGGGGGGGGGGGG+GGG	+	chr1_1:50054509-50054528	None:intergenic	75.0%
!	AAAGAGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054507-50054526	None:intergenic	80.0%
!	AAGAGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054506-50054525	None:intergenic	85.0%
!	AGAGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054505-50054524	None:intergenic	90.0%
!	AGGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054503-50054522	None:intergenic	95.0%
!	GAGGGGGGGGGGGGGGGGGG+GGG	+	chr1_1:50054504-50054523	None:intergenic	95.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	50048232	50057305	50048232	ID=Msa0026280;Name=Msa0026280
chr1_1	mRNA	50048232	50057305	50048232	ID=Msa0026280-mRNA-1;Parent=Msa0026280;Name=Msa0026280-mRNA-1;_AED=0.11;_eAED=0.11;_QI=216\|1\|1\|1\|0.62\|0.66\|9\|654\|292
chr1_1	exon	50048232	50048855	50048232	ID=Msa0026280-mRNA-1:exon:14471;Parent=Msa0026280-mRNA-1
chr1_1	exon	50048937	50049062	50048937	ID=Msa0026280-mRNA-1:exon:14470;Parent=Msa0026280-mRNA-1
chr1_1	exon	50050821	50050880	50050821	ID=Msa0026280-mRNA-1:exon:14469;Parent=Msa0026280-mRNA-1
chr1_1	exon	50055123	50055232	50055123	ID=Msa0026280-mRNA-1:exon:14468;Parent=Msa0026280-mRNA-1
chr1_1	exon	50055606	50055722	50055606	ID=Msa0026280-mRNA-1:exon:14467;Parent=Msa0026280-mRNA-1
chr1_1	exon	50055855	50055977	50055855	ID=Msa0026280-mRNA-1:exon:14466;Parent=Msa0026280-mRNA-1
chr1_1	exon	50056499	50056622	50056499	ID=Msa0026280-mRNA-1:exon:14465;Parent=Msa0026280-mRNA-1
chr1_1	exon	50056749	50056806	50056749	ID=Msa0026280-mRNA-1:exon:14464;Parent=Msa0026280-mRNA-1
chr1_1	exon	50056899	50057305	50056899	ID=Msa0026280-mRNA-1:exon:14463;Parent=Msa0026280-mRNA-1
chr1_1	five_prime_UTR	50057090	50057305	50057090	ID=Msa0026280-mRNA-1:five_prime_utr;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50056899	50057089	50056899	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50056749	50056806	50056749	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50056499	50056622	50056499	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50055855	50055977	50055855	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50055606	50055722	50055606	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50055123	50055232	50055123	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50050821	50050880	50050821	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	CDS	50048967	50049062	50048967	ID=Msa0026280-mRNA-1:cds;Parent=Msa0026280-mRNA-1
chr1_1	three_prime_UTR	50048937	50048966	50048937	ID=Msa0026280-mRNA-1:three_prime_utr;Parent=Msa0026280-mRNA-1
chr1_1	three_prime_UTR	50048232	50048855	50048232	ID=Msa0026280-mRNA-1:three_prime_utr;Parent=Msa0026280-mRNA-1

Gene Sequence

>Msa0026280

ATGTTCTCTGTGGCAGAAGAAAACCAAACCATGAACTCTAATTCTAACTCAATGGCAGCACCAACAACAACTACAACAACTAGTGGTGGAGATGCTTCTGGTAAGAAGGTTAGAAAGCCTTACACAATTACCAAGTCAAGAGAAAGCTGGTCTGATGAAGAACATGACAAGTTTCTTGAAGCTCTTCAATTATTTGATAGAGATTGGAAGAAGATTGAAGATTTTGTTGGCTCTAAAACAGTTATTCAGATTCGAAGTCATGCCCAAAAATACTTCTTAAAGGTTCAAAAGAATGGAACACTAGCTCATGTCCCTCCTCCTCGTCCTAAGCGCAAAGCTATTCATCCTTATCCACAAAAAGCAACAAAAAATGCATCCATTGCTTTTGGCTCTTCGGCAAATACCCTTCTACCTGCAGGGTATGTCTCGTGGGATGAAACGTCCATGCTGATGAATACTTGTCAGGATGAACTCAACAATCTTCAAGGAAATGAAGCTGACATTGGATCAAAGGGGATCAGCAACAGCGGTCTTAGTGGTGTTGAAGATACTAATACAAGGCTCCCTACTTCTCAAATACCAACGCAAGGGACACAAAATCCCGTGATTCATGGTTTGCCGGACTTTGCTGAAGTTTACGGTTTCATTGGAAGTGTTTTTGATCCGGATACAAACGGCCATGTGCAGAAGCTGAAGGAAATGGACCCTATAAACTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTAATTTTGATCCCATTAAGAAGGCGATGTCAACATATGATGAGAATAACGATGCAGTAGGAGTTACTGATGATAAGAAGCAGACAAATGATGACTCATGTCAAACCACTTGA

Protein sequence

>Msa0026280

MFSVAEENQTMNSNSNSMAAPTTTTTTSGGDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAIHPYPQKATKNASIAFGSSANTLLPAGYVSWDETSMLMNTCQDELNNLQGNEADIGSKGISNSGLSGVEDTNTRLPTSQIPTQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYDENNDAVGVTDDKKQTNDDSCQTT*