Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140250 | XP_003621630.1 | 89.266 | 177 | 16 | 2 | 1 | 175 | 1 | 176 | 5.96e-111 | 323 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140250 | sp|Q9LYU3|EF113_ARATH | 50.000 | 178 | 61 | 7 | 1 | 162 | 1 | 166 | 2.04e-42 | 144 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140250 | G7KSW4 | 89.266 | 177 | 16 | 2 | 1 | 175 | 1 | 176 | 2.85e-111 | 323 |
Gene ID | Type | Classification |
---|---|---|
Msa1140250 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0432160 | Msa1140250 | 0.804352 | 2.250846e-49 | -8.615850e-47 |
Msa0476680 | Msa1140250 | 0.804291 | 2.318254e-49 | -8.615850e-47 |
Msa1096910 | Msa1140250 | 0.867038 | 1.837223e-65 | -8.615850e-47 |
Msa0296820 | Msa1140250 | 0.816164 | 6.369503e-52 | -8.615850e-47 |
Msa1140250 | Msa1434040 | 0.801279 | 9.706424e-49 | -8.615850e-47 |
Msa0521010 | Msa1140250 | 0.803637 | 3.169881e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140250 | MtrunA17_Chr7g0221471 | 89.266 | 177 | 16 | 2 | 1 | 175 | 1 | 176 | 5.48e-115 | 323 |
Msa1140250 | MtrunA17_Chr7g0221501 | 88.136 | 177 | 18 | 2 | 1 | 175 | 1 | 176 | 1.34e-106 | 302 |
Msa1140250 | MtrunA17_Chr3g0131601 | 55.484 | 155 | 51 | 5 | 1 | 144 | 33 | 180 | 3.06e-37 | 129 |
Msa1140250 | MtrunA17_Chr8g0383591 | 62.637 | 91 | 25 | 1 | 41 | 122 | 135 | 225 | 7.21e-32 | 116 |
Msa1140250 | MtrunA17_Chr2g0334031 | 50.000 | 108 | 53 | 1 | 1 | 108 | 68 | 174 | 1.39e-30 | 114 |
Msa1140250 | MtrunA17_Chr6g0461941 | 53.378 | 148 | 52 | 3 | 33 | 163 | 2 | 149 | 2.06e-30 | 110 |
Msa1140250 | MtrunA17_Chr4g0044871 | 43.511 | 131 | 50 | 1 | 1 | 107 | 22 | 152 | 3.96e-30 | 110 |
Msa1140250 | MtrunA17_Chr4g0044881 | 75.410 | 61 | 15 | 0 | 47 | 107 | 110 | 170 | 3.48e-29 | 107 |
Msa1140250 | MtrunA17_Chr4g0055761 | 70.667 | 75 | 20 | 2 | 37 | 110 | 132 | 205 | 3.81e-29 | 108 |
Msa1140250 | MtrunA17_Chr4g0044911 | 78.947 | 57 | 12 | 0 | 51 | 107 | 96 | 152 | 4.65e-29 | 107 |
Msa1140250 | MtrunA17_Chr4g0044901 | 78.947 | 57 | 12 | 0 | 51 | 107 | 96 | 152 | 4.83e-29 | 107 |
Msa1140250 | MtrunA17_Chr2g0316931 | 56.667 | 90 | 38 | 1 | 29 | 117 | 8 | 97 | 1.36e-28 | 105 |
Msa1140250 | MtrunA17_Chr4g0046161 | 60.227 | 88 | 30 | 3 | 22 | 107 | 30 | 114 | 2.65e-28 | 102 |
Msa1140250 | MtrunA17_Chr8g0344961 | 66.197 | 71 | 24 | 0 | 38 | 108 | 111 | 181 | 2.69e-28 | 108 |
Msa1140250 | MtrunA17_Chr1g0195151 | 63.750 | 80 | 21 | 2 | 34 | 107 | 56 | 133 | 3.21e-28 | 106 |
Msa1140250 | MtrunA17_Chr2g0283171 | 66.667 | 69 | 22 | 1 | 48 | 115 | 60 | 128 | 8.93e-28 | 101 |
Msa1140250 | MtrunA17_Chr2g0283181 | 71.429 | 70 | 18 | 2 | 48 | 115 | 146 | 215 | 9.31e-28 | 105 |
Msa1140250 | MtrunA17_Chr8g0375031 | 57.143 | 91 | 35 | 2 | 48 | 134 | 122 | 212 | 1.04e-27 | 103 |
Msa1140250 | MtrunA17_Chr8g0335331 | 70.769 | 65 | 18 | 1 | 47 | 110 | 121 | 185 | 1.46e-27 | 102 |
Msa1140250 | MtrunA17_Chr8g0335311 | 72.131 | 61 | 16 | 1 | 51 | 110 | 96 | 156 | 1.03e-26 | 100 |
Msa1140250 | MtrunA17_Chr4g0026881 | 53.608 | 97 | 37 | 3 | 21 | 112 | 66 | 159 | 1.27e-26 | 100 |
Msa1140250 | MtrunA17_Chr5g0438801 | 53.846 | 91 | 42 | 0 | 17 | 107 | 17 | 107 | 1.50e-26 | 102 |
Msa1140250 | MtrunA17_Chr2g0282651 | 72.131 | 61 | 17 | 0 | 47 | 107 | 66 | 126 | 2.08e-26 | 100 |
Msa1140250 | MtrunA17_Chr4g0055781 | 58.333 | 84 | 31 | 2 | 44 | 126 | 95 | 175 | 3.38e-26 | 100 |
Msa1140250 | MtrunA17_Chr2g0295421 | 70.968 | 62 | 18 | 0 | 47 | 108 | 92 | 153 | 4.27e-26 | 100 |
Msa1140250 | MtrunA17_Chr5g0438831 | 73.770 | 61 | 16 | 0 | 47 | 107 | 42 | 102 | 5.58e-26 | 100 |
Msa1140250 | MtrunA17_Chr3g0099871 | 73.770 | 61 | 16 | 0 | 47 | 107 | 23 | 83 | 8.57e-26 | 98.6 |
Msa1140250 | MtrunA17_Chr8g0335321 | 70.492 | 61 | 17 | 1 | 51 | 110 | 96 | 156 | 9.18e-26 | 98.2 |
Msa1140250 | MtrunA17_Chr2g0282621 | 70.492 | 61 | 18 | 0 | 47 | 107 | 11 | 71 | 1.16e-25 | 96.7 |
Msa1140250 | MtrunA17_Chr7g0250711 | 66.667 | 72 | 20 | 2 | 43 | 110 | 49 | 120 | 1.85e-25 | 97.1 |
Msa1140250 | MtrunA17_Chr7g0250731 | 68.116 | 69 | 21 | 1 | 50 | 117 | 60 | 128 | 1.85e-25 | 97.1 |
Msa1140250 | MtrunA17_Chr3g0129421 | 67.416 | 89 | 27 | 1 | 43 | 131 | 162 | 248 | 2.59e-25 | 99.8 |
Msa1140250 | MtrunA17_Chr4g0055801 | 69.118 | 68 | 20 | 1 | 44 | 110 | 147 | 214 | 2.74e-25 | 99.0 |
Msa1140250 | MtrunA17_Chr7g0250721 | 72.581 | 62 | 16 | 1 | 50 | 110 | 60 | 121 | 2.78e-25 | 96.7 |
Msa1140250 | MtrunA17_Chr2g0324131 | 59.722 | 72 | 29 | 0 | 40 | 111 | 207 | 278 | 1.12e-24 | 99.0 |
Msa1140250 | MtrunA17_Chr1g0184081 | 59.740 | 77 | 30 | 1 | 32 | 107 | 2 | 78 | 1.33e-24 | 93.2 |
Msa1140250 | MtrunA17_Chr1g0170531 | 70.968 | 62 | 17 | 1 | 50 | 110 | 88 | 149 | 1.37e-24 | 95.5 |
Msa1140250 | MtrunA17_Chr3g0115631 | 75.439 | 57 | 14 | 0 | 51 | 107 | 150 | 206 | 1.78e-24 | 97.4 |
Msa1140250 | MtrunA17_Chr4g0026931 | 60.000 | 80 | 29 | 2 | 34 | 112 | 116 | 193 | 1.81e-24 | 96.3 |
Msa1140250 | MtrunA17_Chr1g0158971 | 65.152 | 66 | 19 | 1 | 51 | 112 | 115 | 180 | 2.11e-24 | 97.4 |
Msa1140250 | MtrunA17_Chr5g0396911 | 71.429 | 56 | 16 | 0 | 51 | 106 | 112 | 167 | 2.88e-24 | 96.3 |
Msa1140250 | MtrunA17_Chr5g0425561 | 63.014 | 73 | 22 | 1 | 35 | 107 | 162 | 229 | 3.18e-24 | 97.1 |
Msa1140250 | MtrunA17_Chr1g0196871 | 71.186 | 59 | 16 | 1 | 50 | 107 | 15 | 73 | 4.55e-24 | 90.5 |
Msa1140250 | MtrunA17_Chr1g0196781 | 58.904 | 73 | 28 | 1 | 51 | 121 | 152 | 224 | 4.83e-24 | 95.9 |
Msa1140250 | MtrunA17_Chr5g0432821 | 37.500 | 128 | 79 | 1 | 30 | 156 | 103 | 230 | 8.94e-24 | 94.4 |
Msa1140250 | MtrunA17_Chr8g0387801 | 54.321 | 81 | 34 | 1 | 51 | 128 | 107 | 187 | 1.40e-23 | 94.4 |
Msa1140250 | MtrunA17_Chr3g0140161 | 62.121 | 66 | 25 | 0 | 43 | 108 | 35 | 100 | 2.40e-23 | 91.3 |
Msa1140250 | MtrunA17_Chr1g0186731 | 55.844 | 77 | 33 | 1 | 32 | 107 | 2 | 78 | 2.85e-23 | 89.7 |
Msa1140250 | MtrunA17_Chr8g0382491 | 70.175 | 57 | 17 | 0 | 51 | 107 | 113 | 169 | 3.15e-23 | 93.2 |
Msa1140250 | MtrunA17_Chr8g0367911 | 69.643 | 56 | 17 | 0 | 51 | 106 | 44 | 99 | 3.57e-23 | 93.2 |
Msa1140250 | MtrunA17_Chr7g0261101 | 66.154 | 65 | 21 | 1 | 44 | 107 | 13 | 77 | 3.59e-23 | 89.7 |
Msa1140250 | MtrunA17_Chr3g0126321 | 67.857 | 56 | 18 | 0 | 51 | 106 | 113 | 168 | 3.69e-23 | 94.0 |
Msa1140250 | MtrunA17_Chr6g0486701 | 56.944 | 72 | 31 | 0 | 49 | 120 | 42 | 113 | 3.93e-23 | 91.3 |
Msa1140250 | MtrunA17_Chr1g0184071 | 48.936 | 94 | 43 | 2 | 18 | 106 | 32 | 125 | 6.36e-23 | 89.7 |
Msa1140250 | MtrunA17_Chr2g0323171 | 61.667 | 60 | 23 | 0 | 48 | 107 | 62 | 121 | 6.69e-23 | 90.1 |
Msa1140250 | MtrunA17_Chr4g0023411 | 52.941 | 85 | 36 | 1 | 48 | 128 | 62 | 146 | 8.47e-23 | 90.1 |
Msa1140250 | MtrunA17_Chr3g0134161 | 44.118 | 102 | 55 | 2 | 24 | 124 | 18 | 118 | 9.40e-23 | 89.4 |
Msa1140250 | MtrunA17_Chr7g0261151 | 55.844 | 77 | 33 | 1 | 33 | 108 | 2 | 78 | 1.28e-22 | 87.8 |
Msa1140250 | MtrunA17_Chr1g0184031 | 58.571 | 70 | 28 | 1 | 44 | 112 | 77 | 146 | 1.82e-22 | 89.7 |
Msa1140250 | MtrunA17_Chr7g0257911 | 60.606 | 66 | 26 | 0 | 51 | 116 | 31 | 96 | 1.98e-22 | 90.9 |
Msa1140250 | MtrunA17_Chr5g0399441 | 56.757 | 74 | 32 | 0 | 47 | 120 | 24 | 97 | 2.25e-22 | 88.6 |
Msa1140250 | MtrunA17_Chr4g0055951 | 61.905 | 63 | 24 | 0 | 46 | 108 | 69 | 131 | 4.72e-22 | 89.4 |
Msa1140250 | MtrunA17_Chr2g0297331 | 65.000 | 60 | 20 | 1 | 50 | 108 | 13 | 72 | 5.86e-22 | 86.3 |
Msa1140250 | MtrunA17_Chr1g0183981 | 60.870 | 69 | 25 | 2 | 45 | 112 | 70 | 137 | 8.40e-22 | 87.8 |
Msa1140250 | MtrunA17_Chr1g0184011 | 55.556 | 72 | 31 | 1 | 42 | 112 | 75 | 146 | 8.85e-22 | 88.2 |
Msa1140250 | MtrunA17_Chr3g0137174 | 64.912 | 57 | 20 | 0 | 51 | 107 | 8 | 64 | 1.09e-21 | 87.0 |
Msa1140250 | MtrunA17_Chr5g0437371 | 67.857 | 56 | 18 | 0 | 51 | 106 | 66 | 121 | 1.13e-21 | 89.7 |
Msa1140250 | MtrunA17_Chr8g0334801 | 64.062 | 64 | 23 | 0 | 49 | 112 | 50 | 113 | 1.33e-21 | 87.0 |
Msa1140250 | MtrunA17_Chr8g0390091 | 56.944 | 72 | 31 | 0 | 49 | 120 | 35 | 106 | 1.45e-21 | 87.8 |
Msa1140250 | MtrunA17_Chr7g0232261 | 63.934 | 61 | 22 | 0 | 47 | 107 | 57 | 117 | 1.62e-21 | 87.4 |
Msa1140250 | MtrunA17_Chr4g0066931 | 64.286 | 56 | 20 | 0 | 51 | 106 | 53 | 108 | 1.65e-21 | 89.4 |
Msa1140250 | MtrunA17_Chr7g0275841 | 59.375 | 64 | 26 | 0 | 47 | 110 | 24 | 87 | 1.66e-21 | 85.9 |
Msa1140250 | MtrunA17_Chr7g0265851 | 63.934 | 61 | 22 | 0 | 47 | 107 | 20 | 80 | 1.68e-21 | 86.7 |
Msa1140250 | MtrunA17_Chr5g0412641 | 67.857 | 56 | 18 | 0 | 51 | 106 | 46 | 101 | 2.09e-21 | 89.4 |
Msa1140250 | MtrunA17_Chr2g0286161 | 64.286 | 56 | 20 | 0 | 51 | 106 | 50 | 105 | 2.21e-21 | 88.2 |
Msa1140250 | MtrunA17_Chr2g0331231 | 61.667 | 60 | 23 | 0 | 49 | 108 | 39 | 98 | 2.59e-21 | 86.3 |
Msa1140250 | MtrunA17_Chr1g0184061 | 50.000 | 94 | 35 | 4 | 24 | 106 | 41 | 133 | 4.02e-21 | 86.3 |
Msa1140250 | MtrunA17_Chr1g0186671 | 65.517 | 58 | 19 | 1 | 51 | 107 | 19 | 76 | 4.55e-21 | 84.0 |
Msa1140250 | MtrunA17_Chr5g0437671 | 65.517 | 58 | 20 | 0 | 51 | 108 | 85 | 142 | 4.89e-21 | 88.6 |
Msa1140250 | MtrunA17_Chr4g0002631 | 64.912 | 57 | 20 | 0 | 51 | 107 | 8 | 64 | 5.00e-21 | 85.5 |
Msa1140250 | MtrunA17_Chr7g0252381 | 66.071 | 56 | 19 | 0 | 51 | 106 | 42 | 97 | 5.15e-21 | 87.0 |
Msa1140250 | MtrunA17_Chr4g0003421 | 58.108 | 74 | 28 | 1 | 47 | 120 | 36 | 106 | 5.63e-21 | 86.3 |
Msa1140250 | MtrunA17_Chr1g0189941 | 59.649 | 57 | 23 | 0 | 50 | 106 | 23 | 79 | 8.35e-21 | 84.0 |
Msa1140250 | MtrunA17_Chr8g0340311 | 62.295 | 61 | 23 | 0 | 47 | 107 | 43 | 103 | 9.63e-21 | 84.7 |
Msa1140250 | MtrunA17_Chr4g0062551 | 63.158 | 57 | 21 | 0 | 51 | 107 | 53 | 109 | 2.89e-20 | 82.0 |
Msa1140250 | MtrunA17_Chr8g0346741 | 56.250 | 64 | 28 | 0 | 47 | 110 | 35 | 98 | 4.35e-20 | 82.4 |
Msa1140250 | MtrunA17_Chr4g0063751 | 63.158 | 57 | 21 | 0 | 51 | 107 | 7 | 63 | 5.49e-20 | 83.2 |
Msa1140250 | MtrunA17_Chr1g0183961 | 65.217 | 69 | 23 | 1 | 51 | 118 | 27 | 95 | 8.14e-20 | 80.9 |
Msa1140250 | MtrunA17_Chr2g0333011 | 61.667 | 60 | 23 | 0 | 51 | 110 | 7 | 66 | 8.39e-20 | 81.6 |
Msa1140250 | MtrunA17_Chr7g0261181 | 55.056 | 89 | 35 | 2 | 48 | 135 | 10 | 94 | 1.05e-19 | 80.1 |
Msa1140250 | MtrunA17_Chr4g0062161 | 63.158 | 57 | 21 | 0 | 51 | 107 | 53 | 109 | 1.06e-19 | 82.0 |
Msa1140250 | MtrunA17_Chr1g0150661 | 41.111 | 90 | 53 | 0 | 18 | 107 | 2 | 91 | 1.62e-19 | 82.0 |
Msa1140250 | MtrunA17_Chr1g0200931 | 48.718 | 78 | 36 | 2 | 33 | 106 | 2 | 79 | 1.71e-19 | 80.1 |
Msa1140250 | MtrunA17_Chr7g0243431 | 62.500 | 64 | 17 | 1 | 50 | 106 | 77 | 140 | 3.01e-19 | 84.0 |
Msa1140250 | MtrunA17_Chr7g0261201 | 54.000 | 100 | 42 | 3 | 17 | 112 | 61 | 160 | 3.89e-19 | 81.3 |
Msa1140250 | MtrunA17_Chr7g0217991 | 41.667 | 96 | 52 | 1 | 30 | 125 | 21 | 112 | 4.27e-19 | 83.6 |
Msa1140250 | MtrunA17_Chr1g0183931 | 54.444 | 90 | 29 | 2 | 24 | 112 | 85 | 163 | 6.85e-19 | 80.9 |
Msa1140250 | MtrunA17_Chr1g0153151 | 46.835 | 79 | 41 | 1 | 51 | 129 | 44 | 121 | 7.89e-19 | 79.3 |
Msa1140250 | MtrunA17_Chr6g0486711 | 58.108 | 74 | 31 | 0 | 47 | 120 | 45 | 118 | 1.04e-18 | 80.1 |
Msa1140250 | MtrunA17_Chr1g0186681 | 61.017 | 59 | 21 | 1 | 51 | 107 | 19 | 77 | 1.09e-18 | 77.8 |
Msa1140250 | MtrunA17_Chr1g0170471 | 62.069 | 58 | 21 | 1 | 58 | 114 | 90 | 147 | 1.42e-18 | 78.6 |
Msa1140250 | MtrunA17_Chr5g0401871 | 43.529 | 85 | 43 | 1 | 45 | 129 | 19 | 98 | 2.50e-18 | 78.2 |
Msa1140250 | MtrunA17_Chr4g0017851 | 55.000 | 60 | 27 | 0 | 51 | 110 | 118 | 177 | 3.37e-18 | 80.1 |
Msa1140250 | MtrunA17_Chr8g0378811 | 54.839 | 62 | 28 | 0 | 45 | 106 | 49 | 110 | 3.52e-18 | 79.3 |
Msa1140250 | MtrunA17_Chr6g0464581 | 81.132 | 53 | 10 | 0 | 58 | 110 | 187 | 239 | 4.90e-18 | 80.1 |
Msa1140250 | MtrunA17_Chr4g0057241 | 50.667 | 75 | 36 | 1 | 46 | 120 | 10 | 83 | 5.22e-18 | 76.6 |
Msa1140250 | MtrunA17_Chr6g0453661 | 54.098 | 61 | 28 | 0 | 46 | 106 | 33 | 93 | 6.05e-18 | 80.1 |
Msa1140250 | MtrunA17_Chr1g0146191 | 51.190 | 84 | 41 | 0 | 24 | 107 | 20 | 103 | 6.69e-18 | 78.6 |
Msa1140250 | MtrunA17_Chr1g0201671 | 45.690 | 116 | 42 | 2 | 58 | 152 | 146 | 261 | 7.12e-18 | 79.7 |
Msa1140250 | MtrunA17_Chr1g0150671 | 41.111 | 90 | 49 | 1 | 18 | 107 | 17 | 102 | 1.17e-17 | 78.2 |
Msa1140250 | MtrunA17_Chr6g0473941 | 48.750 | 80 | 39 | 1 | 33 | 110 | 13 | 92 | 1.28e-17 | 76.6 |
Msa1140250 | MtrunA17_Chr1g0186741 | 57.895 | 76 | 31 | 1 | 46 | 120 | 68 | 143 | 1.59e-17 | 76.6 |
Msa1140250 | MtrunA17_Chr1g0150631 | 39.604 | 101 | 54 | 2 | 21 | 114 | 1 | 101 | 2.37e-17 | 76.6 |
Msa1140250 | MtrunA17_Chr3g0083501 | 60.784 | 51 | 20 | 0 | 58 | 108 | 2 | 52 | 2.52e-17 | 72.4 |
Msa1140250 | MtrunA17_Chr1g0150691 | 45.333 | 75 | 41 | 0 | 51 | 125 | 22 | 96 | 3.44e-17 | 75.9 |
Msa1140250 | MtrunA17_Chr7g0253424 | 53.333 | 60 | 28 | 0 | 51 | 110 | 39 | 98 | 3.71e-17 | 76.6 |
Msa1140250 | MtrunA17_Chr2g0301191 | 54.386 | 57 | 26 | 0 | 51 | 107 | 19 | 75 | 3.93e-17 | 75.5 |
Msa1140250 | MtrunA17_Chr8g0350701 | 55.556 | 63 | 25 | 1 | 47 | 106 | 20 | 82 | 4.00e-17 | 77.0 |
Msa1140250 | MtrunA17_Chr7g0261171 | 63.235 | 68 | 24 | 1 | 46 | 112 | 80 | 147 | 6.51e-17 | 75.5 |
Msa1140250 | MtrunA17_Chr5g0396191 | 63.793 | 58 | 21 | 0 | 51 | 108 | 11 | 68 | 6.53e-17 | 74.3 |
Msa1140250 | MtrunA17_Chr1g0155751 | 67.241 | 58 | 19 | 0 | 51 | 108 | 39 | 96 | 8.02e-17 | 75.9 |
Msa1140250 | MtrunA17_Chr1g0203861 | 55.000 | 60 | 27 | 0 | 47 | 106 | 40 | 99 | 1.06e-16 | 74.3 |
Msa1140250 | MtrunA17_Chr6g0473861 | 56.452 | 62 | 27 | 0 | 47 | 108 | 59 | 120 | 1.84e-16 | 74.7 |
Msa1140250 | MtrunA17_Chr4g0042761 | 44.156 | 77 | 43 | 0 | 30 | 106 | 27 | 103 | 1.96e-16 | 75.1 |
Msa1140250 | MtrunA17_Chr8g0345531 | 62.500 | 48 | 18 | 0 | 51 | 98 | 116 | 163 | 2.04e-16 | 75.5 |
Msa1140250 | MtrunA17_Chr1g0209891 | 66.667 | 48 | 16 | 0 | 51 | 98 | 54 | 101 | 2.15e-16 | 75.1 |
Msa1140250 | MtrunA17_Chr6g0473931 | 48.052 | 77 | 38 | 1 | 34 | 108 | 14 | 90 | 2.29e-16 | 73.2 |
Msa1140250 | MtrunA17_Chr2g0301171 | 52.632 | 57 | 27 | 0 | 51 | 107 | 19 | 75 | 2.46e-16 | 73.2 |
Msa1140250 | MtrunA17_Chr6g0461271 | 50.794 | 63 | 31 | 0 | 48 | 110 | 30 | 92 | 2.92e-16 | 74.7 |
Msa1140250 | MtrunA17_Chr6g0473741 | 53.226 | 62 | 29 | 0 | 47 | 108 | 62 | 123 | 4.07e-16 | 73.2 |
Msa1140250 | MtrunA17_Chr8g0345551 | 64.583 | 48 | 17 | 0 | 51 | 98 | 117 | 164 | 5.76e-16 | 74.3 |
Msa1140250 | MtrunA17_Chr3g0136551 | 43.529 | 85 | 44 | 2 | 42 | 124 | 58 | 140 | 6.32e-16 | 73.2 |
Msa1140250 | MtrunA17_Chr6g0473771 | 49.231 | 65 | 33 | 0 | 44 | 108 | 36 | 100 | 6.91e-16 | 70.1 |
Msa1140250 | MtrunA17_Chr3g0142081 | 60.000 | 75 | 25 | 1 | 51 | 125 | 39 | 108 | 7.54e-16 | 72.4 |
Msa1140250 | MtrunA17_Chr6g0473881 | 51.613 | 62 | 30 | 0 | 47 | 108 | 106 | 167 | 8.12e-16 | 73.6 |
Msa1140250 | MtrunA17_Chr2g0321071 | 53.030 | 66 | 29 | 2 | 47 | 110 | 43 | 108 | 8.28e-16 | 72.4 |
Msa1140250 | MtrunA17_Chr6g0473961 | 51.562 | 64 | 31 | 0 | 47 | 110 | 50 | 113 | 8.70e-16 | 72.0 |
Msa1140250 | MtrunA17_Chr6g0473971 | 50.000 | 64 | 32 | 0 | 47 | 110 | 50 | 113 | 1.22e-15 | 72.0 |
Msa1140250 | MtrunA17_Chr6g0473981 | 51.562 | 64 | 31 | 0 | 47 | 110 | 50 | 113 | 1.51e-15 | 72.0 |
Msa1140250 | MtrunA17_Chr1g0167781 | 60.294 | 68 | 26 | 1 | 46 | 112 | 77 | 144 | 1.56e-15 | 71.2 |
Msa1140250 | MtrunA17_Chr5g0396171 | 46.875 | 64 | 34 | 0 | 53 | 116 | 26 | 89 | 2.15e-15 | 68.2 |
Msa1140250 | MtrunA17_Chr6g0473781 | 53.333 | 60 | 28 | 0 | 47 | 106 | 53 | 112 | 2.35e-15 | 70.9 |
Msa1140250 | MtrunA17_Chr2g0301181 | 50.877 | 57 | 28 | 0 | 51 | 107 | 19 | 75 | 2.40e-15 | 71.2 |
Msa1140250 | MtrunA17_Chr1g0205961 | 55.000 | 60 | 23 | 1 | 51 | 106 | 115 | 174 | 2.43e-15 | 72.4 |
Msa1140250 | MtrunA17_Chr6g0474001 | 43.902 | 82 | 44 | 1 | 47 | 126 | 50 | 131 | 1.07e-14 | 69.7 |
Msa1140250 | MtrunA17_Chr1g0149331 | 63.158 | 57 | 21 | 0 | 51 | 107 | 7 | 63 | 1.34e-14 | 68.6 |
Msa1140250 | MtrunA17_Chr5g0396301 | 53.333 | 60 | 26 | 1 | 51 | 108 | 18 | 77 | 3.73e-14 | 66.6 |
Msa1140250 | MtrunA17_Chr3g0137831 | 58.730 | 63 | 26 | 0 | 45 | 107 | 2 | 64 | 5.04e-14 | 67.0 |
Msa1140250 | MtrunA17_Chr3g0136541 | 44.595 | 74 | 39 | 1 | 53 | 124 | 42 | 115 | 5.35e-14 | 67.4 |
Msa1140250 | MtrunA17_Chr5g0438841 | 50.000 | 70 | 29 | 1 | 44 | 107 | 3 | 72 | 5.43e-14 | 66.2 |
Msa1140250 | MtrunA17_Chr4g0002771 | 48.936 | 94 | 39 | 2 | 19 | 106 | 42 | 132 | 5.45e-14 | 67.0 |
Msa1140250 | MtrunA17_Chr7g0225131 | 50.877 | 57 | 25 | 1 | 51 | 107 | 29 | 82 | 3.89e-13 | 62.0 |
Msa1140250 | MtrunA17_Chr5g0424051 | 43.434 | 99 | 46 | 3 | 18 | 107 | 56 | 153 | 4.36e-13 | 65.9 |
Msa1140250 | MtrunA17_Chr5g0396741 | 67.213 | 61 | 20 | 0 | 47 | 107 | 113 | 173 | 5.19e-13 | 65.5 |
Msa1140250 | MtrunA17_Chr5g0398081 | 40.964 | 83 | 43 | 1 | 47 | 123 | 45 | 127 | 7.97e-13 | 64.3 |
Msa1140250 | MtrunA17_Chr5g0423811 | 41.053 | 95 | 36 | 2 | 26 | 103 | 66 | 157 | 1.57e-12 | 64.3 |
Msa1140250 | MtrunA17_Chr5g0396181 | 53.333 | 60 | 28 | 0 | 51 | 110 | 21 | 80 | 2.76e-12 | 62.0 |
Msa1140250 | MtrunA17_Chr5g0398091 | 47.059 | 68 | 30 | 1 | 47 | 108 | 50 | 117 | 3.12e-12 | 62.8 |
Msa1140250 | MtrunA17_Chr5g0398061 | 40.964 | 83 | 43 | 1 | 47 | 123 | 45 | 127 | 4.29e-12 | 62.0 |
Msa1140250 | MtrunA17_Chr1g0203831 | 57.377 | 61 | 25 | 1 | 51 | 111 | 57 | 116 | 6.40e-12 | 61.2 |
Msa1140250 | MtrunA17_Chr3g0114761 | 46.250 | 80 | 39 | 2 | 30 | 107 | 6 | 83 | 8.83e-12 | 61.2 |
Msa1140250 | MtrunA17_Chr6g0473791 | 49.057 | 53 | 27 | 0 | 47 | 99 | 53 | 105 | 1.24e-11 | 59.7 |
Msa1140250 | MtrunA17_Chr8g0337801 | 57.778 | 45 | 19 | 0 | 62 | 106 | 169 | 213 | 2.40e-11 | 60.8 |
Msa1140250 | MtrunA17_Chr1g0186721 | 56.897 | 58 | 24 | 1 | 51 | 107 | 17 | 74 | 5.46e-11 | 57.0 |
Msa1140250 | MtrunA17_Chr1g0186711 | 55.172 | 58 | 25 | 1 | 51 | 107 | 17 | 74 | 6.32e-11 | 57.0 |
Msa1140250 | MtrunA17_Chr3g0108241 | 56.897 | 58 | 24 | 1 | 51 | 107 | 115 | 172 | 6.41e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1140250 | AT5G13330.1 | 50.000 | 178 | 61 | 7 | 1 | 162 | 1 | 166 | 2.07e-43 | 144 |
Msa1140250 | AT5G61890.1 | 59.055 | 127 | 48 | 2 | 1 | 123 | 36 | 162 | 5.13e-41 | 139 |
Msa1140250 | AT5G07310.1 | 62.602 | 123 | 40 | 3 | 1 | 121 | 44 | 162 | 6.10e-39 | 134 |
Msa1140250 | AT2G33710.1 | 81.250 | 64 | 12 | 0 | 47 | 110 | 66 | 129 | 9.09e-34 | 119 |
Msa1140250 | AT2G33710.2 | 81.250 | 64 | 12 | 0 | 47 | 110 | 66 | 129 | 1.04e-33 | 119 |
Msa1140250 | AT2G47520.1 | 45.736 | 129 | 64 | 2 | 42 | 165 | 41 | 168 | 4.04e-30 | 108 |
Msa1140250 | AT5G47220.1 | 65.000 | 80 | 27 | 1 | 32 | 110 | 98 | 177 | 1.78e-29 | 108 |
Msa1140250 | AT4G17500.1 | 75.385 | 65 | 15 | 1 | 47 | 110 | 144 | 208 | 1.21e-28 | 107 |
Msa1140250 | AT5G44210.1 | 55.172 | 87 | 36 | 1 | 45 | 131 | 27 | 110 | 1.54e-28 | 105 |
Msa1140250 | AT3G16770.1 | 71.429 | 63 | 18 | 0 | 46 | 108 | 74 | 136 | 5.13e-28 | 105 |
Msa1140250 | AT2G44840.1 | 66.667 | 69 | 22 | 1 | 46 | 113 | 87 | 155 | 1.45e-27 | 103 |
Msa1140250 | AT1G43160.1 | 45.562 | 169 | 59 | 7 | 1 | 148 | 1 | 157 | 1.48e-27 | 102 |
Msa1140250 | AT1G36060.1 | 51.887 | 106 | 44 | 2 | 23 | 121 | 108 | 213 | 3.14e-27 | 104 |
Msa1140250 | AT1G28370.1 | 53.846 | 91 | 37 | 1 | 50 | 140 | 19 | 104 | 1.44e-26 | 99.4 |
Msa1140250 | AT5G51190.1 | 67.123 | 73 | 22 | 2 | 36 | 107 | 58 | 129 | 1.49e-26 | 100 |
Msa1140250 | AT5G50080.2 | 56.731 | 104 | 43 | 2 | 46 | 149 | 81 | 182 | 1.74e-26 | 100 |
Msa1140250 | AT5G50080.1 | 56.731 | 104 | 43 | 2 | 46 | 149 | 72 | 173 | 1.84e-26 | 100 |
Msa1140250 | AT4G11140.1 | 60.274 | 73 | 29 | 0 | 51 | 123 | 87 | 159 | 2.03e-26 | 102 |
Msa1140250 | AT1G28370.2 | 53.846 | 91 | 37 | 1 | 50 | 140 | 57 | 142 | 2.20e-26 | 99.8 |
Msa1140250 | AT3G15210.1 | 72.131 | 61 | 17 | 0 | 47 | 107 | 21 | 81 | 7.63e-26 | 99.0 |
Msa1140250 | AT5G47230.1 | 68.056 | 72 | 20 | 2 | 40 | 110 | 147 | 216 | 8.05e-26 | 100 |
Msa1140250 | AT3G20310.1 | 58.333 | 84 | 29 | 2 | 47 | 130 | 23 | 100 | 1.12e-25 | 99.0 |
Msa1140250 | AT1G72360.1 | 63.636 | 66 | 24 | 0 | 42 | 107 | 16 | 81 | 1.44e-25 | 97.8 |
Msa1140250 | AT1G28360.1 | 70.492 | 61 | 18 | 0 | 47 | 107 | 8 | 68 | 2.41e-25 | 96.7 |
Msa1140250 | AT1G72360.2 | 63.636 | 66 | 24 | 0 | 42 | 107 | 67 | 132 | 2.83e-25 | 98.6 |
Msa1140250 | AT1G72360.3 | 63.636 | 66 | 24 | 0 | 42 | 107 | 65 | 130 | 2.93e-25 | 98.2 |
Msa1140250 | AT4G28140.1 | 62.857 | 70 | 26 | 0 | 51 | 120 | 143 | 212 | 4.09e-25 | 98.6 |
Msa1140250 | AT2G20880.1 | 55.294 | 85 | 35 | 2 | 29 | 111 | 164 | 247 | 6.75e-25 | 99.0 |
Msa1140250 | AT1G03800.1 | 64.062 | 64 | 23 | 0 | 44 | 107 | 46 | 109 | 7.21e-25 | 97.1 |
Msa1140250 | AT2G22200.1 | 66.154 | 65 | 22 | 0 | 46 | 110 | 66 | 130 | 8.05e-25 | 97.1 |
Msa1140250 | AT5G65130.2 | 52.041 | 98 | 39 | 2 | 41 | 133 | 103 | 197 | 8.95e-25 | 97.4 |
Msa1140250 | AT1G22190.1 | 72.414 | 58 | 16 | 0 | 51 | 108 | 83 | 140 | 9.63e-25 | 97.1 |
Msa1140250 | AT5G65130.1 | 52.041 | 98 | 39 | 2 | 41 | 133 | 101 | 195 | 9.91e-25 | 97.4 |
Msa1140250 | AT5G64750.1 | 83.019 | 53 | 9 | 0 | 58 | 110 | 192 | 244 | 1.25e-24 | 99.0 |
Msa1140250 | AT4G39780.1 | 59.722 | 72 | 29 | 0 | 37 | 108 | 79 | 150 | 2.01e-24 | 96.3 |
Msa1140250 | AT4G27950.1 | 57.143 | 77 | 31 | 1 | 30 | 106 | 99 | 173 | 5.20e-24 | 96.3 |
Msa1140250 | AT2G35700.1 | 65.625 | 64 | 22 | 0 | 45 | 108 | 39 | 102 | 5.46e-24 | 93.6 |
Msa1140250 | AT1G78080.1 | 73.684 | 57 | 15 | 0 | 51 | 107 | 152 | 208 | 5.75e-24 | 96.3 |
Msa1140250 | AT3G57600.1 | 53.333 | 90 | 40 | 1 | 50 | 139 | 27 | 114 | 5.83e-24 | 95.1 |
Msa1140250 | AT4G17490.1 | 58.537 | 82 | 30 | 2 | 37 | 114 | 120 | 201 | 6.35e-24 | 95.1 |
Msa1140250 | AT4G32800.1 | 62.121 | 66 | 25 | 0 | 43 | 108 | 11 | 76 | 6.85e-24 | 94.0 |
Msa1140250 | AT3G23240.1 | 47.170 | 106 | 49 | 2 | 14 | 112 | 39 | 144 | 7.07e-24 | 93.6 |
Msa1140250 | AT5G61600.1 | 55.128 | 78 | 34 | 1 | 50 | 126 | 87 | 164 | 7.83e-24 | 94.4 |
Msa1140250 | AT5G07580.1 | 64.706 | 68 | 22 | 2 | 41 | 107 | 101 | 167 | 1.12e-23 | 92.8 |
Msa1140250 | AT2G31230.1 | 53.333 | 90 | 36 | 2 | 29 | 112 | 59 | 148 | 2.86e-23 | 92.8 |
Msa1140250 | AT1G75490.1 | 65.000 | 60 | 21 | 0 | 51 | 110 | 42 | 101 | 3.50e-23 | 91.7 |
Msa1140250 | AT3G61630.1 | 54.348 | 92 | 36 | 2 | 32 | 118 | 87 | 177 | 3.90e-23 | 93.6 |
Msa1140250 | AT1G50640.1 | 68.852 | 61 | 19 | 0 | 47 | 107 | 24 | 84 | 5.70e-23 | 91.7 |
Msa1140250 | AT4G13620.1 | 59.722 | 72 | 29 | 0 | 51 | 122 | 232 | 303 | 9.61e-23 | 93.6 |
Msa1140250 | AT4G16750.1 | 62.500 | 64 | 24 | 0 | 45 | 108 | 34 | 97 | 1.26e-22 | 89.4 |
Msa1140250 | AT5G11590.1 | 66.129 | 62 | 21 | 0 | 47 | 108 | 47 | 108 | 1.70e-22 | 90.5 |
Msa1140250 | AT2G46310.1 | 64.516 | 62 | 22 | 0 | 45 | 106 | 93 | 154 | 1.84e-22 | 91.7 |
Msa1140250 | AT5G53290.1 | 66.071 | 56 | 19 | 0 | 51 | 106 | 125 | 180 | 1.94e-22 | 92.4 |
Msa1140250 | AT3G23230.1 | 64.516 | 62 | 21 | 1 | 47 | 107 | 16 | 77 | 2.15e-22 | 87.8 |
Msa1140250 | AT2G44940.1 | 64.516 | 62 | 22 | 0 | 47 | 108 | 96 | 157 | 2.61e-22 | 91.3 |
Msa1140250 | AT5G43410.1 | 70.690 | 58 | 16 | 1 | 51 | 107 | 15 | 72 | 3.58e-22 | 87.0 |
Msa1140250 | AT3G16280.2 | 46.465 | 99 | 41 | 1 | 22 | 108 | 38 | 136 | 3.78e-22 | 90.1 |
Msa1140250 | AT3G16280.1 | 46.465 | 99 | 41 | 1 | 22 | 108 | 20 | 118 | 4.22e-22 | 89.4 |
Msa1140250 | AT5G13910.1 | 64.912 | 57 | 20 | 0 | 50 | 106 | 19 | 75 | 4.72e-22 | 89.0 |
Msa1140250 | AT2G40340.2 | 51.190 | 84 | 39 | 1 | 51 | 134 | 14 | 95 | 4.85e-22 | 90.1 |
Msa1140250 | AT2G40340.5 | 51.190 | 84 | 39 | 1 | 51 | 134 | 14 | 95 | 4.85e-22 | 90.1 |
Msa1140250 | AT2G40340.4 | 51.190 | 84 | 39 | 1 | 51 | 134 | 14 | 95 | 4.85e-22 | 90.1 |
Msa1140250 | AT1G46768.3 | 42.391 | 92 | 53 | 0 | 21 | 112 | 1 | 92 | 5.45e-22 | 86.7 |
Msa1140250 | AT4G23750.2 | 66.071 | 56 | 19 | 0 | 51 | 106 | 122 | 177 | 6.17e-22 | 90.9 |
Msa1140250 | AT4G23750.1 | 66.071 | 56 | 19 | 0 | 51 | 106 | 122 | 177 | 6.17e-22 | 90.9 |
Msa1140250 | AT1G12980.1 | 68.421 | 57 | 18 | 0 | 50 | 106 | 56 | 112 | 6.92e-22 | 90.5 |
Msa1140250 | AT1G46768.1 | 42.391 | 92 | 53 | 0 | 21 | 112 | 1 | 92 | 8.31e-22 | 86.7 |
Msa1140250 | AT1G46768.2 | 42.391 | 92 | 53 | 0 | 21 | 112 | 1 | 92 | 8.31e-22 | 86.7 |
Msa1140250 | AT5G18560.1 | 66.071 | 56 | 19 | 0 | 51 | 106 | 55 | 110 | 1.04e-21 | 90.5 |
Msa1140250 | AT2G40340.3 | 51.190 | 84 | 39 | 1 | 51 | 134 | 72 | 153 | 1.15e-21 | 89.4 |
Msa1140250 | AT4G34410.1 | 80.702 | 57 | 11 | 0 | 51 | 107 | 136 | 192 | 1.23e-21 | 89.0 |
Msa1140250 | AT1G71450.1 | 62.069 | 58 | 22 | 0 | 51 | 108 | 24 | 81 | 1.42e-21 | 87.0 |
Msa1140250 | AT2G40340.1 | 51.190 | 84 | 39 | 1 | 51 | 134 | 72 | 153 | 1.53e-21 | 89.7 |
Msa1140250 | AT2G40340.6 | 51.190 | 84 | 39 | 1 | 51 | 134 | 79 | 160 | 1.60e-21 | 89.7 |
Msa1140250 | AT5G25390.2 | 43.750 | 112 | 48 | 3 | 51 | 159 | 7 | 106 | 2.48e-21 | 86.3 |
Msa1140250 | AT2G25820.1 | 65.517 | 58 | 20 | 0 | 51 | 108 | 26 | 83 | 3.02e-21 | 87.0 |
Msa1140250 | AT1G24590.1 | 67.857 | 56 | 18 | 0 | 51 | 106 | 58 | 113 | 4.90e-21 | 87.8 |
Msa1140250 | AT3G11020.1 | 65.000 | 60 | 21 | 0 | 51 | 110 | 78 | 137 | 5.49e-21 | 88.2 |
Msa1140250 | AT1G53910.1 | 67.143 | 70 | 23 | 0 | 46 | 115 | 120 | 189 | 5.54e-21 | 88.6 |
Msa1140250 | AT1G53910.2 | 67.143 | 70 | 23 | 0 | 46 | 115 | 120 | 189 | 5.54e-21 | 88.6 |
Msa1140250 | AT1G53910.3 | 67.143 | 70 | 23 | 0 | 46 | 115 | 118 | 187 | 5.89e-21 | 88.6 |
Msa1140250 | AT1G01250.1 | 57.812 | 64 | 27 | 0 | 47 | 110 | 41 | 104 | 8.44e-21 | 85.1 |
Msa1140250 | AT3G14230.3 | 74.603 | 63 | 16 | 0 | 46 | 108 | 118 | 180 | 9.13e-21 | 88.2 |
Msa1140250 | AT3G14230.2 | 74.603 | 63 | 16 | 0 | 46 | 108 | 119 | 181 | 9.58e-21 | 88.2 |
Msa1140250 | AT5G25810.1 | 47.674 | 86 | 45 | 0 | 23 | 108 | 8 | 93 | 9.86e-21 | 85.5 |
Msa1140250 | AT3G14230.1 | 74.603 | 63 | 16 | 0 | 46 | 108 | 123 | 185 | 1.02e-20 | 87.8 |
Msa1140250 | AT4G18450.1 | 66.129 | 62 | 19 | 2 | 47 | 106 | 106 | 167 | 1.36e-20 | 86.7 |
Msa1140250 | AT1G28160.1 | 59.375 | 64 | 22 | 1 | 43 | 106 | 35 | 94 | 2.06e-20 | 85.1 |
Msa1140250 | AT3G60490.1 | 57.971 | 69 | 23 | 1 | 51 | 113 | 71 | 139 | 2.53e-20 | 85.1 |
Msa1140250 | AT2G36450.1 | 60.000 | 65 | 25 | 1 | 47 | 110 | 11 | 75 | 2.85e-20 | 83.6 |
Msa1140250 | AT4G06746.1 | 53.968 | 63 | 29 | 0 | 50 | 112 | 35 | 97 | 4.13e-20 | 82.0 |
Msa1140250 | AT1G15360.1 | 63.158 | 57 | 21 | 0 | 51 | 107 | 7 | 63 | 4.79e-20 | 83.2 |
Msa1140250 | AT1G15360.2 | 63.158 | 57 | 21 | 0 | 51 | 107 | 7 | 63 | 4.79e-20 | 83.2 |
Msa1140250 | AT5G18450.1 | 62.500 | 56 | 21 | 0 | 51 | 106 | 34 | 89 | 6.02e-20 | 85.1 |
Msa1140250 | AT1G77200.1 | 62.121 | 66 | 25 | 0 | 43 | 108 | 35 | 100 | 7.65e-20 | 83.6 |
Msa1140250 | AT5G25190.1 | 61.404 | 57 | 22 | 0 | 51 | 107 | 8 | 64 | 7.78e-20 | 82.4 |
Msa1140250 | AT5G05410.2 | 50.000 | 82 | 37 | 1 | 51 | 128 | 79 | 160 | 1.03e-19 | 84.3 |
Msa1140250 | AT3G50260.1 | 47.436 | 78 | 40 | 1 | 44 | 121 | 14 | 90 | 1.15e-19 | 81.3 |
Msa1140250 | AT5G05410.1 | 50.000 | 82 | 37 | 1 | 51 | 128 | 79 | 160 | 1.56e-19 | 84.3 |
Msa1140250 | AT4G36900.1 | 53.968 | 63 | 29 | 0 | 46 | 108 | 25 | 87 | 2.20e-19 | 81.6 |
Msa1140250 | AT1G22985.1 | 61.290 | 62 | 21 | 1 | 48 | 106 | 72 | 133 | 3.27e-19 | 80.1 |
Msa1140250 | AT1G71130.1 | 59.091 | 66 | 22 | 1 | 46 | 106 | 74 | 139 | 4.20e-19 | 79.7 |
Msa1140250 | AT5G25390.1 | 42.857 | 112 | 46 | 4 | 51 | 159 | 7 | 103 | 4.67e-19 | 80.5 |
Msa1140250 | AT2G23340.1 | 48.571 | 70 | 36 | 0 | 51 | 120 | 28 | 97 | 7.51e-19 | 79.7 |
Msa1140250 | AT5G67190.1 | 53.968 | 63 | 29 | 0 | 46 | 108 | 16 | 78 | 1.20e-18 | 79.3 |
Msa1140250 | AT4G25470.1 | 39.474 | 114 | 51 | 3 | 3 | 108 | 5 | 108 | 1.84e-18 | 79.3 |
Msa1140250 | AT2G40350.2 | 57.895 | 57 | 24 | 0 | 51 | 107 | 74 | 130 | 1.91e-18 | 78.2 |
Msa1140250 | AT2G40350.1 | 57.895 | 57 | 24 | 0 | 51 | 107 | 67 | 123 | 2.19e-18 | 77.8 |
Msa1140250 | AT1G12890.1 | 62.500 | 56 | 21 | 0 | 51 | 106 | 21 | 76 | 2.80e-18 | 79.0 |
Msa1140250 | AT4G25490.1 | 58.065 | 62 | 26 | 0 | 47 | 108 | 44 | 105 | 3.07e-18 | 79.0 |
Msa1140250 | AT1G53170.1 | 58.228 | 79 | 31 | 1 | 47 | 125 | 27 | 103 | 3.30e-18 | 78.2 |
Msa1140250 | AT4G31060.1 | 46.835 | 79 | 35 | 1 | 36 | 107 | 5 | 83 | 3.34e-18 | 78.2 |
Msa1140250 | AT1G21910.1 | 57.895 | 57 | 24 | 0 | 51 | 107 | 50 | 106 | 3.36e-18 | 79.0 |
Msa1140250 | AT4G25480.1 | 49.351 | 77 | 37 | 1 | 34 | 108 | 32 | 108 | 4.68e-18 | 78.6 |
Msa1140250 | AT5G21960.1 | 51.562 | 64 | 31 | 0 | 45 | 108 | 1 | 64 | 6.27e-18 | 78.2 |
Msa1140250 | AT1G06160.1 | 71.429 | 63 | 17 | 1 | 51 | 112 | 82 | 144 | 7.08e-18 | 78.6 |
Msa1140250 | AT5G19790.1 | 45.455 | 77 | 42 | 0 | 30 | 106 | 1 | 77 | 8.28e-18 | 78.6 |
Msa1140250 | AT5G67000.1 | 39.344 | 122 | 50 | 3 | 1 | 105 | 61 | 175 | 1.07e-17 | 76.6 |
Msa1140250 | AT5G51990.1 | 58.333 | 60 | 25 | 0 | 47 | 106 | 50 | 109 | 1.96e-17 | 77.0 |
Msa1140250 | AT1G19210.1 | 44.156 | 77 | 41 | 1 | 51 | 125 | 12 | 88 | 2.33e-17 | 75.9 |
Msa1140250 | AT1G68550.1 | 51.163 | 86 | 33 | 3 | 46 | 124 | 110 | 193 | 3.51e-17 | 77.8 |
Msa1140250 | AT1G68550.2 | 51.163 | 86 | 33 | 3 | 46 | 124 | 110 | 193 | 3.51e-17 | 77.8 |
Msa1140250 | AT5G61590.1 | 71.186 | 59 | 16 | 1 | 50 | 107 | 106 | 164 | 4.87e-17 | 75.5 |
Msa1140250 | AT3G23220.1 | 70.690 | 58 | 16 | 1 | 51 | 107 | 14 | 71 | 2.02e-16 | 72.4 |
Msa1140250 | AT1G04370.1 | 72.414 | 58 | 15 | 1 | 51 | 107 | 20 | 77 | 2.17e-16 | 72.0 |
Msa1140250 | AT1G74930.1 | 52.632 | 57 | 27 | 0 | 51 | 107 | 21 | 77 | 5.16e-16 | 72.4 |
Msa1140250 | AT1G33760.1 | 60.000 | 60 | 24 | 0 | 51 | 110 | 20 | 79 | 8.64e-15 | 68.9 |
Msa1140250 | AT2G40220.1 | 66.102 | 59 | 20 | 0 | 48 | 106 | 52 | 110 | 1.68e-14 | 70.5 |
Msa1140250 | AT5G11190.1 | 64.912 | 57 | 20 | 0 | 51 | 107 | 7 | 63 | 2.65e-14 | 67.8 |
Msa1140250 | AT1G64380.1 | 69.355 | 62 | 19 | 0 | 46 | 107 | 131 | 192 | 3.81e-14 | 69.3 |
Msa1140250 | AT1G63030.2 | 51.667 | 60 | 29 | 0 | 47 | 106 | 26 | 85 | 4.87e-14 | 67.0 |
Msa1140250 | AT1G63030.1 | 51.667 | 60 | 29 | 0 | 47 | 106 | 26 | 85 | 4.87e-14 | 67.0 |
Msa1140250 | AT1G22810.1 | 37.607 | 117 | 55 | 4 | 51 | 153 | 14 | 126 | 9.64e-14 | 65.5 |
Msa1140250 | AT1G12610.1 | 48.333 | 60 | 31 | 0 | 47 | 106 | 26 | 85 | 1.12e-13 | 66.6 |
Msa1140250 | AT2G38340.1 | 56.716 | 67 | 21 | 1 | 50 | 108 | 69 | 135 | 1.24e-13 | 67.0 |
Msa1140250 | AT1G12630.1 | 56.923 | 65 | 27 | 1 | 46 | 110 | 14 | 77 | 2.27e-13 | 65.5 |
Msa1140250 | AT1G71520.1 | 58.140 | 43 | 18 | 0 | 51 | 93 | 14 | 56 | 1.26e-12 | 62.4 |
Msa1140250 | AT1G77640.1 | 57.377 | 61 | 26 | 0 | 47 | 107 | 39 | 99 | 1.27e-12 | 64.3 |
Msa1140250 | AT1G80580.1 | 62.295 | 61 | 23 | 0 | 46 | 106 | 111 | 171 | 2.07e-12 | 63.9 |
Msa1140250 | AT1G49120.1 | 59.574 | 47 | 19 | 0 | 51 | 97 | 87 | 133 | 3.47e-12 | 63.9 |
Msa1140250 | AT3G25890.1 | 62.222 | 45 | 17 | 0 | 53 | 97 | 133 | 177 | 4.94e-12 | 63.2 |
Msa1140250 | AT3G25890.2 | 62.222 | 45 | 17 | 0 | 53 | 97 | 133 | 177 | 4.94e-12 | 63.2 |
Msa1140250 | AT1G44830.1 | 53.968 | 63 | 28 | 1 | 47 | 108 | 31 | 93 | 1.12e-11 | 61.2 |
Msa1140250 | AT1G68840.2 | 45.833 | 72 | 35 | 2 | 37 | 106 | 49 | 118 | 1.80e-11 | 62.0 |
Msa1140250 | AT1G68840.1 | 45.833 | 72 | 35 | 2 | 37 | 106 | 49 | 118 | 1.80e-11 | 62.0 |
Msa1140250 | AT2G20350.1 | 43.636 | 110 | 54 | 2 | 1 | 102 | 29 | 138 | 6.85e-11 | 58.2 |
Msa1140250 | AT5G67010.1 | 35.106 | 94 | 51 | 1 | 1 | 84 | 30 | 123 | 7.35e-11 | 58.2 |
Find 79 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGTTTGATGCTTATAATTA+TGG | 0.170509 | 7_4:+11640206 | Msa1140250:five_prime_UTR |
TTGCATTGAACAACTCTTTC+AGG | 0.178236 | 7_4:-11642661 | None:intergenic |
GGATTTATAAGTGTATTATT+TGG | 0.213417 | 7_4:+11643142 | Msa1140250:three_prime_UTR |
AAAAGATGAGATGCATAATA+AGG | 0.243026 | 7_4:-11642805 | None:intergenic |
CAAAATTGACAGAAATATTA+TGG | 0.279794 | 7_4:-11643100 | None:intergenic |
TAGAATTAGATGCATAATTA+TGG | 0.280746 | 7_4:-11640232 | None:intergenic |
GACAGAGACCATGGGGAAAA+TGG | 0.284163 | 7_4:+11642506 | Msa1140250:CDS |
ATTATGCATCTAATTCTAAT+TGG | 0.291806 | 7_4:+11640237 | Msa1140250:five_prime_UTR |
ATGTAAGAAAAGAGAGTATT+TGG | 0.303207 | 7_4:-11643193 | None:intergenic |
GGCAACTTTCCATGCCTTCT+TGG | 0.305541 | 7_4:-11640125 | None:intergenic |
CCATTCCAATGAAGTATATA+TGG | 0.314979 | 7_4:+11643216 | Msa1140250:three_prime_UTR |
TGAGCATACTGAAACAAGTT+TGG | 0.320431 | 7_4:-11642754 | None:intergenic |
TCTGCTCTCTCTCAAGTCAT+TGG | 0.374696 | 7_4:+11640290 | Msa1140250:CDS |
AGTTTGATGCTTATAATTAT+GGG | 0.377566 | 7_4:+11640207 | Msa1140250:five_prime_UTR |
TACCAAGTTTAAATATAAAC+TGG | 0.398392 | 7_4:+11642995 | Msa1140250:three_prime_UTR |
ACAATCAACCTCAACAACTA+TGG | 0.399207 | 7_4:+11640349 | Msa1140250:CDS |
ATACGGGATTTCATGATTGC+AGG | 0.400948 | 7_4:-11642884 | None:intergenic |
GAGAAAGAGGAGTATGCATT+AGG | 0.405853 | 7_4:+11640176 | Msa1140250:five_prime_UTR |
AGACCTAGCTAGTATAAGTA+AGG | 0.421083 | 7_4:+11640028 | Msa1140250:five_prime_UTR |
ATATCTCAACTGCATGAATA+CGG | 0.428119 | 7_4:-11642901 | None:intergenic |
GTGTGGGTTATTATTATGAT+TGG | 0.433380 | 7_4:-11640321 | None:intergenic |
TGCATTGAACAACTCTTTCA+GGG | 0.439733 | 7_4:-11642660 | None:intergenic |
GAGCATACTGAAACAAGTTT+GGG | 0.446792 | 7_4:-11642753 | None:intergenic |
AGTCACCATATATACTTCAT+TGG | 0.451410 | 7_4:-11643221 | None:intergenic |
ACAGAGACCATGGGGAAAAT+GGG | 0.460862 | 7_4:+11642507 | Msa1140250:CDS |
AAAGATGAGATGCATAATAA+GGG | 0.465199 | 7_4:-11642804 | None:intergenic |
TGAAGTATATATGGTGACTA+GGG | 0.471146 | 7_4:+11643225 | Msa1140250:three_prime_UTR |
AAAGCAGCTAGAGTTTGGTT+AGG | 0.477187 | 7_4:+11642553 | Msa1140250:CDS |
TTCATTGACCATAGTTGTTG+AGG | 0.484975 | 7_4:-11640357 | None:intergenic |
GAGAAAATCAAATCTAAAAG+TGG | 0.487004 | 7_4:+11640100 | Msa1140250:five_prime_UTR |
ATGGTAGACAAATCAGTGTC+TGG | 0.487271 | 7_4:-11640263 | None:intergenic |
ATCAGAGGCTAAAGAGAAAG+AGG | 0.488821 | 7_4:+11640163 | Msa1140250:five_prime_UTR |
GACCAGTTTATATTTAAACT+TGG | 0.499232 | 7_4:-11642997 | None:intergenic |
GCTACCATGCACTACCATGC+AGG | 0.505228 | 7_4:-11643072 | None:intergenic |
ATCACTAGATTCTACTGGCC+CGG | 0.509965 | 7_4:-11642859 | None:intergenic |
TGACAGAAATATTATGGATG+TGG | 0.512665 | 7_4:-11643094 | None:intergenic |
TGCCGCGACTTGTAAATGTC+GGG | 0.522778 | 7_4:+11643045 | Msa1140250:three_prime_UTR |
CCTTGATCTAGAGGAGGTTG+AGG | 0.535263 | 7_4:-11640392 | None:intergenic |
AGAAACAAACCTTGATCTAG+AGG | 0.536098 | 7_4:-11640401 | None:intergenic |
CCATATATACTTCATTGGAA+TGG | 0.541888 | 7_4:-11643216 | None:intergenic |
AGGTTGATTGTGCCATGTGT+GGG | 0.542111 | 7_4:-11640337 | None:intergenic |
GAGGTTGATTGTGCCATGTG+TGG | 0.544012 | 7_4:-11640338 | None:intergenic |
ATCTAAAAGTGGATCCAAGA+AGG | 0.547535 | 7_4:+11640111 | Msa1140250:five_prime_UTR |
ATGAAGTATATATGGTGACT+AGG | 0.547591 | 7_4:+11643224 | Msa1140250:three_prime_UTR |
GAGGAGTGAGACAGAGACCA+TGG | 0.549706 | 7_4:+11642497 | Msa1140250:CDS |
TATCTCAACTGCATGAATAC+GGG | 0.549874 | 7_4:-11642900 | None:intergenic |
TGTTCTAGAAACTAGAGTCA+AGG | 0.557127 | 7_4:+11643121 | Msa1140250:three_prime_UTR |
AGGAAATCACTAGATTCTAC+TGG | 0.559811 | 7_4:-11642864 | None:intergenic |
AATAGTGCAATTCAACAAAG+TGG | 0.561647 | 7_4:+11642697 | Msa1140250:CDS |
TTGAGAGAGAGCAGAAACCA+TGG | 0.565044 | 7_4:-11640282 | None:intergenic |
CCTCAACCTCCTCTAGATCA+AGG | 0.566113 | 7_4:+11640392 | Msa1140250:CDS |
AAAGTGGATCCAAGAAGGCA+TGG | 0.568948 | 7_4:+11640116 | Msa1140250:five_prime_UTR |
TGAAGGAGATCGTCAACCAC+CGG | 0.578060 | 7_4:+11642840 | Msa1140250:CDS |
AGGAGTGAGACAGAGACCAT+GGG | 0.579528 | 7_4:+11642498 | Msa1140250:CDS |
TTCCCGACATTTACAAGTCG+CGG | 0.584444 | 7_4:-11643047 | None:intergenic |
TGCCCTTACTTATACTAGCT+AGG | 0.590184 | 7_4:-11640031 | None:intergenic |
AAAGCTGCACTCAAATTCAA+AGG | 0.590296 | 7_4:+11642616 | Msa1140250:CDS |
GTTGTATAATCAAGATTGAA+CGG | 0.598230 | 7_4:+11642929 | Msa1140250:three_prime_UTR |
TCTGATGTTTGTGAAGATAG+TGG | 0.598564 | 7_4:-11640146 | None:intergenic |
GACCTAGCTAGTATAAGTAA+GGG | 0.598593 | 7_4:+11640029 | Msa1140250:five_prime_UTR |
ATGCCGCGACTTGTAAATGT+CGG | 0.599631 | 7_4:+11643044 | Msa1140250:three_prime_UTR |
AGACACTGATTTGTCTACCA+TGG | 0.603882 | 7_4:+11640265 | Msa1140250:exon |
TGATCTAGAGGAGGTTGAGG+TGG | 0.605376 | 7_4:-11640389 | None:intergenic |
TTGACATGAATATGATCTTG+AGG | 0.619992 | 7_4:-11640060 | None:intergenic |
GAAGGAGATCGTCAACCACC+GGG | 0.620049 | 7_4:+11642841 | Msa1140250:CDS |
AAGTATATATGGTGACTAGG+GGG | 0.621655 | 7_4:+11643227 | Msa1140250:three_prime_UTR |
CTACCATGCACTACCATGCA+GGG | 0.622697 | 7_4:-11643071 | None:intergenic |
AGTATATATGGTGACTAGGG+GGG | 0.629285 | 7_4:+11643228 | Msa1140250:three_prime_UTR |
GGTCGATCTTGATCATCGAA+TGG | 0.631398 | 7_4:+11643016 | Msa1140250:three_prime_UTR |
AATCCCTGCATGGTAGTGCA+TGG | 0.631510 | 7_4:+11643068 | Msa1140250:three_prime_UTR |
AACAAACCTTGATCTAGAGG+AGG | 0.651253 | 7_4:-11640398 | None:intergenic |
AAATGTCGGGAATCCCTGCA+TGG | 0.658029 | 7_4:+11643058 | Msa1140250:three_prime_UTR |
GAAGTATATATGGTGACTAG+GGG | 0.659040 | 7_4:+11643226 | Msa1140250:three_prime_UTR |
TCATAATAATAACCCACACA+TGG | 0.659589 | 7_4:+11640325 | Msa1140250:CDS |
TGTCTCACTCCTCTATAGTG+CGG | 0.669612 | 7_4:-11642487 | None:intergenic |
TCATGCAGTTGAGATATCAG+TGG | 0.670716 | 7_4:+11642907 | Msa1140250:three_prime_UTR |
ACTATCTTCACAAACATCAG+AGG | 0.676164 | 7_4:+11640148 | Msa1140250:five_prime_UTR |
GGAGTGAGACAGAGACCATG+GGG | 0.677981 | 7_4:+11642499 | Msa1140250:CDS |
ACTAGATTCTACTGGCCCGG+TGG | 0.682011 | 7_4:-11642856 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTAATTAATTTTCTAAA+TGG | + | chr7_4:11640467-11640486 | Msa1140250:intron | 10.0% |
!!! | GTTTAATTAATTTTCTAAAT+GGG | + | chr7_4:11640468-11640487 | Msa1140250:intron | 10.0% |
!!! | ACTATAAATTCATTTTTTTA+AGG | + | chr7_4:11640928-11640947 | Msa1140250:intron | 10.0% |
!! | AATATTGTATAATATATGAA+GGG | - | chr7_4:11641021-11641040 | None:intergenic | 10.0% |
!! | AAATATTGTATAATATATGA+AGG | - | chr7_4:11641022-11641041 | None:intergenic | 10.0% |
!!! | TAACGATTTTTAAATTAAAA+TGG | - | chr7_4:11641420-11641439 | None:intergenic | 10.0% |
!! | CTAAAAAAAAAAAAAAAACT+AGG | - | chr7_4:11641514-11641533 | None:intergenic | 10.0% |
!!! | CTAGTTTTTTTTTTTTTTTT+AGG | + | chr7_4:11641512-11641531 | Msa1140250:intron | 10.0% |
!! | TTATTAATTATCTTATTCTA+AGG | + | chr7_4:11641863-11641882 | Msa1140250:intron | 10.0% |
!!! | ATTTTTTTAAGGTGATAATT+TGG | + | chr7_4:11640939-11640958 | Msa1140250:intron | 15.0% |
!!! | TTTTTTTAAGGTGATAATTT+GGG | + | chr7_4:11640940-11640959 | Msa1140250:intron | 15.0% |
!! | ATATTGTATAATATATGAAG+GGG | - | chr7_4:11641020-11641039 | None:intergenic | 15.0% |
!! | GACATTATACTATTAATATA+AGG | + | chr7_4:11641142-11641161 | Msa1140250:intron | 15.0% |
!! | AATATCTTGGTAAAAAAAAA+AGG | - | chr7_4:11641483-11641502 | None:intergenic | 15.0% |
!! | ATCAATGAAATATATTGTTA+CGG | + | chr7_4:11642281-11642300 | Msa1140250:intron | 15.0% |
!! | AGTTTGATGCTTATAATTAT+GGG | + | chr7_4:11640207-11640226 | Msa1140250:five_prime_UTR | 20.0% |
!! | TAGAATTAGATGCATAATTA+TGG | - | chr7_4:11640235-11640254 | None:intergenic | 20.0% |
!! | ATTATGCATCTAATTCTAAT+TGG | + | chr7_4:11640237-11640256 | Msa1140250:five_prime_UTR | 20.0% |
!!! | GGATAAATTTATGCTATTTT+TGG | + | chr7_4:11640489-11640508 | Msa1140250:intron | 20.0% |
!!! | TTATCATGACTACTTTTAAA+GGG | - | chr7_4:11640585-11640604 | None:intergenic | 20.0% |
!!! | ATTATCATGACTACTTTTAA+AGG | - | chr7_4:11640586-11640605 | None:intergenic | 20.0% |
!!! | AGTCATGATAATTTAGAATT+TGG | + | chr7_4:11640594-11640613 | Msa1140250:intron | 20.0% |
!! | TTTCGATCATGATTTAAATT+TGG | + | chr7_4:11640649-11640668 | Msa1140250:intron | 20.0% |
!! | TTATTTATCTCACGATTAAT+GGG | - | chr7_4:11640728-11640747 | None:intergenic | 20.0% |
!! | TTTATTTATCTCACGATTAA+TGG | - | chr7_4:11640729-11640748 | None:intergenic | 20.0% |
!!! | TGCTTCTTTCTTTTTATATA+TGG | + | chr7_4:11640869-11640888 | Msa1140250:intron | 20.0% |
!!! | AAACTCTTTTTTTGAATGAA+GGG | - | chr7_4:11641388-11641407 | None:intergenic | 20.0% |
!!! | TAAACTCTTTTTTTGAATGA+AGG | - | chr7_4:11641389-11641408 | None:intergenic | 20.0% |
!!! | ACCAATACTAAATCAATTTT+AGG | + | chr7_4:11641602-11641621 | Msa1140250:intron | 20.0% |
!!! | CAAGTAAGCTAATTATTTTT+TGG | + | chr7_4:11641839-11641858 | Msa1140250:intron | 20.0% |
!! | AACTAACGATAAATCTTATT+TGG | + | chr7_4:11641958-11641977 | Msa1140250:intron | 20.0% |
!!! | TAAATCTTATTTGGAACATA+TGG | + | chr7_4:11641967-11641986 | Msa1140250:intron | 20.0% |
!! | TACCAAGTTTAAATATAAAC+TGG | + | chr7_4:11642995-11643014 | Msa1140250:three_prime_UTR | 20.0% |
!! | CAAAATTGACAGAAATATTA+TGG | - | chr7_4:11643103-11643122 | None:intergenic | 20.0% |
!! | GGATTTATAAGTGTATTATT+TGG | + | chr7_4:11643142-11643161 | Msa1140250:three_prime_UTR | 20.0% |
! | AGAAAAAGTTTAAGCGAATT+GGG | - | chr7_4:11639999-11640018 | None:intergenic | 25.0% |
! | GAGAAAATCAAATCTAAAAG+TGG | + | chr7_4:11640100-11640119 | Msa1140250:five_prime_UTR | 25.0% |
! | GAGTTTGATGCTTATAATTA+TGG | + | chr7_4:11640206-11640225 | Msa1140250:five_prime_UTR | 25.0% |
!!! | CCAATTTTTTTTGGGAAATT+AGG | - | chr7_4:11640556-11640575 | None:intergenic | 25.0% |
! | CCTAATTTCCCAAAAAAAAT+TGG | + | chr7_4:11640553-11640572 | Msa1140250:intron | 25.0% |
!!! | GGTTTACACCAATTTTTTTT+GGG | - | chr7_4:11640564-11640583 | None:intergenic | 25.0% |
!!! | TAATTTAGAATTTGGTAACG+AGG | + | chr7_4:11640602-11640621 | Msa1140250:intron | 25.0% |
! | TTTCGATCATGATTCAAATT+TGG | + | chr7_4:11640765-11640784 | Msa1140250:intron | 25.0% |
! | GTTTCTCTCCAAAAAAATTA+GGG | + | chr7_4:11640971-11640990 | Msa1140250:intron | 25.0% |
! | TATAATGTCATGTAGATCAA+TGG | - | chr7_4:11641131-11641150 | None:intergenic | 25.0% |
!!! | AAACAAACTCTTGCTTTTTA+AGG | - | chr7_4:11641260-11641279 | None:intergenic | 25.0% |
! | TCTAATAATATCGACATTAC+TGG | - | chr7_4:11641299-11641318 | None:intergenic | 25.0% |
! | GATTTGAACTAAAAGATTCA+CGG | + | chr7_4:11641334-11641353 | Msa1140250:intron | 25.0% |
! | TTCCAAAGTTCTTAATAACT+AGG | - | chr7_4:11641550-11641569 | None:intergenic | 25.0% |
!! | GCCTAAAATTGATTTAGTAT+TGG | - | chr7_4:11641606-11641625 | None:intergenic | 25.0% |
! | AAACAGTACTATCATATATG+TGG | - | chr7_4:11641671-11641690 | None:intergenic | 25.0% |
! | TAGCTAATATATACTAGTAC+AGG | + | chr7_4:11641702-11641721 | Msa1140250:intron | 25.0% |
!! | CAACTTATATTTTGCTTCTA+TGG | + | chr7_4:11642067-11642086 | Msa1140250:intron | 25.0% |
! | ACTCATTGAGTATATAGATT+AGG | - | chr7_4:11642151-11642170 | None:intergenic | 25.0% |
! | AAAGATGAGATGCATAATAA+GGG | - | chr7_4:11642807-11642826 | None:intergenic | 25.0% |
! | AAAAGATGAGATGCATAATA+AGG | - | chr7_4:11642808-11642827 | None:intergenic | 25.0% |
! | GTTGTATAATCAAGATTGAA+CGG | + | chr7_4:11642929-11642948 | Msa1140250:three_prime_UTR | 25.0% |
! | GACCAGTTTATATTTAAACT+TGG | - | chr7_4:11643000-11643019 | None:intergenic | 25.0% |
!!! | ATGTAAGAAAAGAGAGTATT+TGG | - | chr7_4:11643196-11643215 | None:intergenic | 25.0% |
GAGAAAAAGTTTAAGCGAAT+TGG | - | chr7_4:11640000-11640019 | None:intergenic | 30.0% | |
TTGACATGAATATGATCTTG+AGG | - | chr7_4:11640063-11640082 | None:intergenic | 30.0% | |
! | GTGTGGGTTATTATTATGAT+TGG | - | chr7_4:11640324-11640343 | None:intergenic | 30.0% |
TCATAATAATAACCCACACA+TGG | + | chr7_4:11640325-11640344 | Msa1140250:CDS | 30.0% | |
!!! | TTCCACTTTTTCTCCAAAAA+TGG | - | chr7_4:11640521-11640540 | None:intergenic | 30.0% |
!!! | GGGTTTACACCAATTTTTTT+TGG | - | chr7_4:11640565-11640584 | None:intergenic | 30.0% |
GGTTTCTCTCCAAAAAAATT+AGG | + | chr7_4:11640970-11640989 | Msa1140250:intron | 30.0% | |
!!! | CTCATACACCCTAATTTTTT+TGG | - | chr7_4:11640982-11641001 | None:intergenic | 30.0% |
CAAAAAAATTAGGGTGTATG+AGG | + | chr7_4:11640980-11640999 | Msa1140250:intron | 30.0% | |
ATGAAAATGTGCTTATGTTC+TGG | + | chr7_4:11641097-11641116 | Msa1140250:intron | 30.0% | |
!!! | AACTCTTGCTTTTTAAGGAT+AGG | - | chr7_4:11641255-11641274 | None:intergenic | 30.0% |
! | AAAGCAAGAGTTTGTTTGTA+AGG | + | chr7_4:11641263-11641282 | Msa1140250:intron | 30.0% |
!! | AATATCGACATTACTGGTTT+AGG | - | chr7_4:11641293-11641312 | None:intergenic | 30.0% |
CTAGGCATAACTAAATATCT+TGG | - | chr7_4:11641496-11641515 | None:intergenic | 30.0% | |
TGCCTAGTTATTAAGAACTT+TGG | + | chr7_4:11641545-11641564 | Msa1140250:intron | 30.0% | |
!! | GATTTAGTATTGGTGTTGAA+AGG | - | chr7_4:11641596-11641615 | None:intergenic | 30.0% |
!! | TCAATGAGTATTGCTATTTC+CGG | + | chr7_4:11642162-11642181 | Msa1140250:intron | 30.0% |
TTCGTAATAAAATCTTTCGC+CGG | - | chr7_4:11642184-11642203 | None:intergenic | 30.0% | |
! | GCGAAAGATTTTATTACGAA+GGG | + | chr7_4:11642184-11642203 | Msa1140250:intron | 30.0% |
TGAAATATATTGTTACGGTC+AGG | + | chr7_4:11642286-11642305 | Msa1140250:intron | 30.0% | |
GAAATATATTGTTACGGTCA+GGG | + | chr7_4:11642287-11642306 | Msa1140250:intron | 30.0% | |
! | TCGAGTAATCACTATTGATT+CGG | + | chr7_4:11642316-11642335 | Msa1140250:intron | 30.0% |
AGATCATATGCATGCATATA+TGG | - | chr7_4:11642376-11642395 | None:intergenic | 30.0% | |
!!! | AAACTCTAGCTGCTTTTTTT+GGG | - | chr7_4:11642549-11642568 | None:intergenic | 30.0% |
AATAGTGCAATTCAACAAAG+TGG | + | chr7_4:11642697-11642716 | Msa1140250:CDS | 30.0% | |
! | CTTTTCAATCAACAACATGA+AGG | + | chr7_4:11642823-11642842 | Msa1140250:CDS | 30.0% |
ATATCTCAACTGCATGAATA+CGG | - | chr7_4:11642904-11642923 | None:intergenic | 30.0% | |
TGACAGAAATATTATGGATG+TGG | - | chr7_4:11643097-11643116 | None:intergenic | 30.0% | |
CCATATATACTTCATTGGAA+TGG | - | chr7_4:11643219-11643238 | None:intergenic | 30.0% | |
CCATTCCAATGAAGTATATA+TGG | + | chr7_4:11643216-11643235 | Msa1140250:three_prime_UTR | 30.0% | |
AGTCACCATATATACTTCAT+TGG | - | chr7_4:11643224-11643243 | None:intergenic | 30.0% | |
ATGAAGTATATATGGTGACT+AGG | + | chr7_4:11643224-11643243 | Msa1140250:three_prime_UTR | 30.0% | |
TGAAGTATATATGGTGACTA+GGG | + | chr7_4:11643225-11643244 | Msa1140250:three_prime_UTR | 30.0% | |
AGACCTAGCTAGTATAAGTA+AGG | + | chr7_4:11640028-11640047 | Msa1140250:five_prime_UTR | 35.0% | |
GACCTAGCTAGTATAAGTAA+GGG | + | chr7_4:11640029-11640048 | Msa1140250:five_prime_UTR | 35.0% | |
ATCTAAAAGTGGATCCAAGA+AGG | + | chr7_4:11640111-11640130 | Msa1140250:five_prime_UTR | 35.0% | |
TCTGATGTTTGTGAAGATAG+TGG | - | chr7_4:11640149-11640168 | None:intergenic | 35.0% | |
ACTATCTTCACAAACATCAG+AGG | + | chr7_4:11640148-11640167 | Msa1140250:five_prime_UTR | 35.0% | |
ACAATCAACCTCAACAACTA+TGG | + | chr7_4:11640349-11640368 | Msa1140250:CDS | 35.0% | |
TTCATTGACCATAGTTGTTG+AGG | - | chr7_4:11640360-11640379 | None:intergenic | 35.0% | |
AGAAACAAACCTTGATCTAG+AGG | - | chr7_4:11640404-11640423 | None:intergenic | 35.0% | |
!!! | TTTTTGGAGCTGTCCATTTT+TGG | + | chr7_4:11640505-11640524 | Msa1140250:intron | 35.0% |
!! | GTCCATTTTTGGAGAAAAAG+TGG | + | chr7_4:11640516-11640535 | Msa1140250:intron | 35.0% |
GTCATGTAGATCAATGGTTA+TGG | - | chr7_4:11641125-11641144 | None:intergenic | 35.0% | |
TGACTTTGACTATCCAGAAA+GGG | - | chr7_4:11641778-11641797 | None:intergenic | 35.0% | |
ATGACTTTGACTATCCAGAA+AGG | - | chr7_4:11641779-11641798 | None:intergenic | 35.0% | |
ACTGAAATGTACACCTTGAA+GGG | + | chr7_4:11641925-11641944 | Msa1140250:intron | 35.0% | |
! | GGCGAAAGATTTTATTACGA+AGG | + | chr7_4:11642183-11642202 | Msa1140250:intron | 35.0% |
AGTGGAAAACATGAGTGAAA+TGG | + | chr7_4:11642246-11642265 | Msa1140250:intron | 35.0% | |
AAAAAGAAACCGCACTATAG+AGG | + | chr7_4:11642478-11642497 | Msa1140250:CDS | 35.0% | |
!!! | CAAACTCTAGCTGCTTTTTT+TGG | - | chr7_4:11642550-11642569 | None:intergenic | 35.0% |
CAAAAAAAGCAGCTAGAGTT+TGG | + | chr7_4:11642548-11642567 | Msa1140250:CDS | 35.0% | |
AAAGCTGCACTCAAATTCAA+AGG | + | chr7_4:11642616-11642635 | Msa1140250:CDS | 35.0% | |
TGCATTGAACAACTCTTTCA+GGG | - | chr7_4:11642663-11642682 | None:intergenic | 35.0% | |
TTGCATTGAACAACTCTTTC+AGG | - | chr7_4:11642664-11642683 | None:intergenic | 35.0% | |
GAGCATACTGAAACAAGTTT+GGG | - | chr7_4:11642756-11642775 | None:intergenic | 35.0% | |
TGAGCATACTGAAACAAGTT+TGG | - | chr7_4:11642757-11642776 | None:intergenic | 35.0% | |
AGGAAATCACTAGATTCTAC+TGG | - | chr7_4:11642867-11642886 | None:intergenic | 35.0% | |
TATCTCAACTGCATGAATAC+GGG | - | chr7_4:11642903-11642922 | None:intergenic | 35.0% | |
!! | TGTTCTAGAAACTAGAGTCA+AGG | + | chr7_4:11643121-11643140 | Msa1140250:three_prime_UTR | 35.0% |
GAAGTATATATGGTGACTAG+GGG | + | chr7_4:11643226-11643245 | Msa1140250:three_prime_UTR | 35.0% | |
AAGTATATATGGTGACTAGG+GGG | + | chr7_4:11643227-11643246 | Msa1140250:three_prime_UTR | 35.0% | |
TGCCCTTACTTATACTAGCT+AGG | - | chr7_4:11640034-11640053 | None:intergenic | 40.0% | |
ATCAGAGGCTAAAGAGAAAG+AGG | + | chr7_4:11640163-11640182 | Msa1140250:five_prime_UTR | 40.0% | |
! | GAGAAAGAGGAGTATGCATT+AGG | + | chr7_4:11640176-11640195 | Msa1140250:five_prime_UTR | 40.0% |
ATGGTAGACAAATCAGTGTC+TGG | - | chr7_4:11640266-11640285 | None:intergenic | 40.0% | |
!! | AGACACTGATTTGTCTACCA+TGG | + | chr7_4:11640265-11640284 | Msa1140250:exon | 40.0% |
AACAAACCTTGATCTAGAGG+AGG | - | chr7_4:11640401-11640420 | None:intergenic | 40.0% | |
GGTGATAATTTGGGTGTATG+AGG | + | chr7_4:11640949-11640968 | Msa1140250:intron | 40.0% | |
! | CGGTTGAGTATTAGTTTCAG+TGG | + | chr7_4:11641354-11641373 | Msa1140250:intron | 40.0% |
TATGTTGCTCAATCCCTTTC+TGG | + | chr7_4:11641762-11641781 | Msa1140250:intron | 40.0% | |
GGTGTACATTTCAGTGTCAT+CGG | - | chr7_4:11641920-11641939 | None:intergenic | 40.0% | |
CACTGAAATGTACACCTTGA+AGG | + | chr7_4:11641924-11641943 | Msa1140250:intron | 40.0% | |
CTGAAATGTACACCTTGAAG+GGG | + | chr7_4:11641926-11641945 | Msa1140250:intron | 40.0% | |
!! | GTTTGATTTGTTCCCCTTCA+AGG | - | chr7_4:11641941-11641960 | None:intergenic | 40.0% |
CCACTAAGCATGAGATCTAA+CGG | - | chr7_4:11642231-11642250 | None:intergenic | 40.0% | |
AACAACGCATGCACAAAACA+AGG | - | chr7_4:11642445-11642464 | None:intergenic | 40.0% | |
GCATGCGTTGTTAATGAAAG+AGG | + | chr7_4:11642453-11642472 | Msa1140250:intron | 40.0% | |
AAAGCAGCTAGAGTTTGGTT+AGG | + | chr7_4:11642553-11642572 | Msa1140250:CDS | 40.0% | |
ATACGGGATTTCATGATTGC+AGG | - | chr7_4:11642887-11642906 | None:intergenic | 40.0% | |
TCATGCAGTTGAGATATCAG+TGG | + | chr7_4:11642907-11642926 | Msa1140250:three_prime_UTR | 40.0% | |
AGTATATATGGTGACTAGGG+GGG | + | chr7_4:11643228-11643247 | Msa1140250:three_prime_UTR | 40.0% | |
AAAGTGGATCCAAGAAGGCA+TGG | + | chr7_4:11640116-11640135 | Msa1140250:five_prime_UTR | 45.0% | |
TTGAGAGAGAGCAGAAACCA+TGG | - | chr7_4:11640285-11640304 | None:intergenic | 45.0% | |
TCTGCTCTCTCTCAAGTCAT+TGG | + | chr7_4:11640290-11640309 | Msa1140250:CDS | 45.0% | |
! | AGGTTGATTGTGCCATGTGT+GGG | - | chr7_4:11640340-11640359 | None:intergenic | 45.0% |
CCGTTAGATCTCATGCTTAG+TGG | + | chr7_4:11642228-11642247 | Msa1140250:intron | 45.0% | |
TGTCTCACTCCTCTATAGTG+CGG | - | chr7_4:11642490-11642509 | None:intergenic | 45.0% | |
ACAGAGACCATGGGGAAAAT+GGG | + | chr7_4:11642507-11642526 | Msa1140250:CDS | 45.0% | |
ATCACTAGATTCTACTGGCC+CGG | - | chr7_4:11642862-11642881 | None:intergenic | 45.0% | |
GGTCGATCTTGATCATCGAA+TGG | + | chr7_4:11643016-11643035 | Msa1140250:three_prime_UTR | 45.0% | |
ATGCCGCGACTTGTAAATGT+CGG | + | chr7_4:11643044-11643063 | Msa1140250:three_prime_UTR | 45.0% | |
TTCCCGACATTTACAAGTCG+CGG | - | chr7_4:11643050-11643069 | None:intergenic | 45.0% | |
!!! | TAGTTTTTTTTTTTTTTTTA+GGG | + | chr7_4:11641513-11641532 | Msa1140250:intron | 5.0% |
GGCAACTTTCCATGCCTTCT+TGG | - | chr7_4:11640128-11640147 | None:intergenic | 50.0% | |
! | GAGGTTGATTGTGCCATGTG+TGG | - | chr7_4:11640341-11640360 | None:intergenic | 50.0% |
TGATCTAGAGGAGGTTGAGG+TGG | - | chr7_4:11640392-11640411 | None:intergenic | 50.0% | |
CCTTGATCTAGAGGAGGTTG+AGG | - | chr7_4:11640395-11640414 | None:intergenic | 50.0% | |
CCTCAACCTCCTCTAGATCA+AGG | + | chr7_4:11640392-11640411 | Msa1140250:CDS | 50.0% | |
AGGAGTGAGACAGAGACCAT+GGG | + | chr7_4:11642498-11642517 | Msa1140250:CDS | 50.0% | |
GACAGAGACCATGGGGAAAA+TGG | + | chr7_4:11642506-11642525 | Msa1140250:CDS | 50.0% | |
TGAAGGAGATCGTCAACCAC+CGG | + | chr7_4:11642840-11642859 | Msa1140250:CDS | 50.0% | |
TGCCGCGACTTGTAAATGTC+GGG | + | chr7_4:11643045-11643064 | Msa1140250:three_prime_UTR | 50.0% | |
AAATGTCGGGAATCCCTGCA+TGG | + | chr7_4:11643058-11643077 | Msa1140250:three_prime_UTR | 50.0% | |
! | AATCCCTGCATGGTAGTGCA+TGG | + | chr7_4:11643068-11643087 | Msa1140250:three_prime_UTR | 50.0% |
CTACCATGCACTACCATGCA+GGG | - | chr7_4:11643074-11643093 | None:intergenic | 50.0% | |
GAGGAGTGAGACAGAGACCA+TGG | + | chr7_4:11642497-11642516 | Msa1140250:CDS | 55.0% | |
GGAGTGAGACAGAGACCATG+GGG | + | chr7_4:11642499-11642518 | Msa1140250:CDS | 55.0% | |
! | TCAGCTGCCCATTTTCCCCA+TGG | - | chr7_4:11642517-11642536 | None:intergenic | 55.0% |
GAAGGAGATCGTCAACCACC+GGG | + | chr7_4:11642841-11642860 | Msa1140250:CDS | 55.0% | |
ACTAGATTCTACTGGCCCGG+TGG | - | chr7_4:11642859-11642878 | None:intergenic | 55.0% | |
GCTACCATGCACTACCATGC+AGG | - | chr7_4:11643075-11643094 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 11639968 | 11643282 | 11639968 | ID=Msa1140250;Name=Msa1140250 |
chr7_4 | mRNA | 11639968 | 11643282 | 11639968 | ID=Msa1140250-mRNA-1;Parent=Msa1140250;Name=Msa1140250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=316|1|1|1|1|1|2|412|175 |
chr7_4 | exon | 11639968 | 11640413 | 11639968 | ID=Msa1140250-mRNA-1:exon:2753;Parent=Msa1140250-mRNA-1 |
chr7_4 | exon | 11642473 | 11643282 | 11642473 | ID=Msa1140250-mRNA-1:exon:2754;Parent=Msa1140250-mRNA-1 |
chr7_4 | five_prime_UTR | 11639968 | 11640283 | 11639968 | ID=Msa1140250-mRNA-1:five_prime_utr;Parent=Msa1140250-mRNA-1 |
chr7_4 | CDS | 11640284 | 11640413 | 11640284 | ID=Msa1140250-mRNA-1:cds;Parent=Msa1140250-mRNA-1 |
chr7_4 | CDS | 11642473 | 11642870 | 11642473 | ID=Msa1140250-mRNA-1:cds;Parent=Msa1140250-mRNA-1 |
chr7_4 | three_prime_UTR | 11642871 | 11643282 | 11642871 | ID=Msa1140250-mRNA-1:three_prime_utr;Parent=Msa1140250-mRNA-1 |
Gene Sequence |
Protein sequence |