AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1145520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1145520 MtrunA17_Chr7g0257341 88.438 493 7 1 1 443 216 708 0.0 873
Msa1145520 MtrunA17_Chr7g0257341 35.000 160 52 4 334 441 1453 1612 2.51e-13 72.8
Msa1145520 MtrunA17_Chr3g0093091 24.419 430 248 12 80 441 353 773 3.86e-23 102
Msa1145520 MtrunA17_Chr4g0060401 25.459 436 240 15 80 443 346 768 8.14e-20 92.8
Msa1145520 MtrunA17_Chr4g0060501 24.943 437 241 15 80 443 348 770 2.24e-19 91.3
Msa1145520 MtrunA17_Chr4g0060431 23.991 446 234 13 80 443 333 755 1.43e-18 89.0
Msa1145520 MtrunA17_Chr3g0093041 27.414 321 137 13 209 443 23 333 3.77e-17 84.0
Msa1145520 MtrunA17_Chr3g0132711 25.967 362 174 12 161 443 1 347 1.54e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1145520 AT2G41700.1 65.191 497 110 6 1 443 216 703 0.0 617
Msa1145520 AT2G41700.1 34.426 183 55 6 324 441 1425 1607 1.20e-12 70.9
Msa1145520 AT2G41700.2 65.363 358 70 4 139 443 277 633 4.51e-147 461
Msa1145520 AT2G41700.2 34.426 183 55 6 324 441 1383 1565 1.23e-12 70.9
Msa1145520 AT3G47730.1 26.994 489 241 16 56 443 211 684 1.53e-33 134
Msa1145520 AT5G61690.1 28.112 466 234 17 70 443 228 684 6.95e-25 108
Msa1145520 AT5G61690.2 28.051 467 234 17 70 443 228 685 1.22e-24 107
Msa1145520 AT5G61730.2 27.789 475 225 15 70 443 229 686 1.76e-24 107
Msa1145520 AT5G61730.1 27.696 473 218 15 70 443 229 676 2.44e-24 107
Msa1145520 AT5G61700.2 25.349 430 242 15 79 443 338 753 2.51e-24 107
Msa1145520 AT5G61700.4 25.349 430 242 15 79 443 338 753 2.51e-24 107
Msa1145520 AT5G61700.1 25.349 430 242 15 79 443 338 753 2.52e-24 107
Msa1145520 AT5G61700.3 26.377 345 227 13 79 410 338 668 5.15e-23 102
Msa1145520 AT3G47790.3 23.758 463 260 16 57 443 299 744 2.21e-19 91.7
Msa1145520 AT3G47790.2 23.758 463 260 16 57 443 180 625 2.90e-19 91.3
Msa1145520 AT3G47790.1 23.758 463 260 16 57 443 299 744 3.20e-19 91.3
Msa1145520 AT3G47760.1 24.943 437 230 16 80 443 321 732 8.54e-19 90.1
Msa1145520 AT3G47770.3 24.363 353 235 11 75 410 346 683 1.84e-18 88.6
Msa1145520 AT3G47770.2 22.831 438 254 13 75 443 346 768 2.12e-18 89.0
Msa1145520 AT5G61740.3 24.554 448 255 15 62 443 176 606 2.13e-18 88.6
Msa1145520 AT3G47770.1 22.831 438 254 13 75 443 320 742 2.19e-18 88.6
Msa1145520 AT5G61740.1 24.554 448 255 15 62 443 315 745 2.47e-18 88.6
Msa1145520 AT3G47760.3 24.605 443 230 16 80 443 355 772 2.74e-18 88.6
Msa1145520 AT5G61740.2 24.554 448 255 15 62 443 281 711 3.65e-18 88.2
Msa1145520 AT3G47780.1 25.113 442 231 16 79 443 353 771 1.44e-17 86.3
Msa1145520 AT3G47750.1 25.867 375 235 15 67 419 340 693 1.31e-16 83.2
Msa1145520 AT3G47760.2 22.897 428 226 14 80 443 355 742 1.54e-13 73.6

Find 100 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCTTCTTCCTCCTACTTC+TGG 0.133180 7_4:-22338832 Msa1145520:CDS
CCCTTCCCTCTCTTGTTAAT+TGG 0.187261 7_4:-22343895 Msa1145520:five_prime_UTR
CTGGAATAGTTGGACTTATT+TGG 0.197397 7_4:-22336091 Msa1145520:CDS
TTGTATGTGCAGGTATTTAT+TGG 0.229356 7_4:-22343514 Msa1145520:intron
AGTTCTAAAGTTAAATTTAC+TGG 0.244219 7_4:-22341257 Msa1145520:CDS
GTCTTCTTCCTCCTACTTCT+GGG 0.270709 7_4:-22338831 Msa1145520:CDS
ACTGTTGTGAGATCTCTTTC+TGG 0.273009 7_4:-22336215 Msa1145520:CDS
TTTAGTTTGCAGGAGTCTTC+TGG 0.276941 7_4:-22341893 Msa1145520:intron
ACTGTAAATCTTCCTCTTCT+AGG 0.277706 7_4:-22343748 Msa1145520:CDS
TTCACCTACGGCATTTGCTC+TGG 0.278019 7_4:-22342037 Msa1145520:CDS
TCCAACAGCTACAGCTGTTT+TGG 0.280638 7_4:+22342239 None:intergenic
GTTTGTCACATATGCTTTGC+AGG 0.284013 7_4:-22343201 Msa1145520:intron
TCGGCACTCAAGTTTAATTC+AGG 0.308544 7_4:+22343772 None:intergenic
TGTATGTGCAGGTATTTATT+GGG 0.309009 7_4:-22343513 Msa1145520:intron
GTTGGAACTCTGTCATTTCT+TGG 0.330253 7_4:-22342222 Msa1145520:CDS
TAACTTATCAGGCGAGAAAC+TGG 0.332760 7_4:+22343480 None:intergenic
TCCCTTGGAATCGCATTGAT+TGG 0.344579 7_4:-22336173 Msa1145520:CDS
GTATGTTAGTAGGGTTAAAC+TGG 0.345740 7_4:+22343686 None:intergenic
AGTAAATTTAACTTTAGAAC+TGG 0.349680 7_4:+22341259 None:intergenic
CAAACACAGAATAACTTATC+AGG 0.350511 7_4:+22343469 None:intergenic
TGAGTCAGAAGGGACTCTTT+TGG 0.353773 7_4:-22341225 Msa1145520:CDS
CGCTTCTCTGCTTTCACCTA+CGG 0.361398 7_4:-22342049 Msa1145520:CDS
CTGTTGTGAGATCTCTTTCT+GGG 0.369733 7_4:-22336214 Msa1145520:CDS
GGAGCTATTCGTATGTTAGT+AGG 0.370162 7_4:+22343676 None:intergenic
AAGGTTCTTCCAAGGGAGTA+TGG 0.374418 7_4:-22341338 Msa1145520:CDS
GCGCTCATGTTGGGCTCCGC+TGG 0.375073 7_4:-22341987 Msa1145520:CDS
ACACTGCTCTATTGTGCAAT+TGG 0.384452 7_4:-22341830 Msa1145520:CDS
AAGAGGAAGATTTACAGTTT+CGG 0.386632 7_4:+22343753 None:intergenic
TGACTTCCTTTACTATTGCC+TGG 0.393633 7_4:+22343620 None:intergenic
GACAGAGTAATACGGCAAAA+AGG 0.396423 7_4:+22342197 None:intergenic
TGAACGAATCAACCATTTGC+TGG 0.399773 7_4:+22343815 None:intergenic
ATTGCTTGAACAGGTGGGCC+TGG 0.405008 7_4:-22336252 Msa1145520:intron
CCTTTACTATTGCCTGGAAC+TGG 0.418313 7_4:+22343626 None:intergenic
ACGGCATATTTCATCTCTCT+TGG 0.427859 7_4:-22343223 Msa1145520:CDS
ATTACGAGCGCGCTCATGTT+GGG 0.429973 7_4:-22341996 Msa1145520:CDS
TCACCTACGGCATTTGCTCT+GGG 0.433323 7_4:-22342036 Msa1145520:CDS
GTGTACTCTCGAGTGGGAAA+TGG 0.435592 7_4:+22343655 None:intergenic
AAGCTTATTGCTTCTAGAGC+AGG 0.438341 7_4:+22341185 None:intergenic
CGCATTGATTGGAAATAGTA+AGG 0.438731 7_4:-22336162 Msa1145520:intron
TCAAATCAGGAATTTGCATA+AGG 0.448553 7_4:-22341039 Msa1145520:CDS
TTGAGCAGAACTGGAATAGT+TGG 0.454509 7_4:-22336101 Msa1145520:intron
TTTGTAGGACATAATGGAGC+TGG 0.455412 7_4:-22338883 Msa1145520:intron
GTACACTGATGACCAGTTCC+AGG 0.462454 7_4:-22343638 Msa1145520:CDS
AATTGGACTGTATTTCGATA+AGG 0.466199 7_4:-22341813 Msa1145520:intron
GATTACGAGCGCGCTCATGT+TGG 0.466297 7_4:-22341997 Msa1145520:CDS
GGCTCCGCTGGAGCAACATA+TGG 0.471776 7_4:-22341975 Msa1145520:CDS
ACGACGATATCAATGCTTGT+TGG 0.482730 7_4:-22338853 Msa1145520:CDS
AAGCTTAGACATGAAACAAC+AGG 0.485612 7_4:-22341168 Msa1145520:CDS
CAAAGAAGGACTCTATATGA+TGG 0.486792 7_4:-22343255 Msa1145520:CDS
TGCCTAACTCAGGATCTTGA+AGG 0.505756 7_4:-22342076 Msa1145520:intron
ATGAAACAACAGGAGCTTGA+TGG 0.505998 7_4:-22341158 Msa1145520:CDS
TTCCAATCAATGCGATTCCA+AGG 0.506800 7_4:+22336171 None:intergenic
AATAGTTGGACTTATTTGGC+AGG 0.507599 7_4:-22336087 Msa1145520:CDS
GGCAATAGTAAAGGAAGTCA+TGG 0.509731 7_4:-22343617 Msa1145520:CDS
CCCGCCATATGTTGCTCCAG+CGG 0.527463 7_4:+22341971 None:intergenic
TCCGCTGGAGCAACATATGG+CGG 0.529317 7_4:-22341972 Msa1145520:CDS
GAGCTATTCGTATGTTAGTA+GGG 0.529944 7_4:+22343677 None:intergenic
GCCAAAACAGCTGTAGCTGT+TGG 0.530978 7_4:-22342240 Msa1145520:CDS
CAGGAACAAAAGATCAAAGA+AGG 0.534386 7_4:-22343269 Msa1145520:CDS
GTATGTGCAGGTATTTATTG+GGG 0.535618 7_4:-22343512 Msa1145520:intron
AAGTTATTCTGTGTTTGAGA+AGG 0.542155 7_4:-22343463 Msa1145520:intron
CCAGTTCCAGGCAATAGTAA+AGG 0.542212 7_4:-22343626 Msa1145520:CDS
GTAGGGTTAAACTGGGTCCA+TGG 0.546902 7_4:+22343694 None:intergenic
TATCGCAGTCCATACTCCCT+TGG 0.551807 7_4:+22341329 None:intergenic
AGATGCCAATTAACAAGAGA+GGG 0.552813 7_4:+22343890 None:intergenic
TTGTAGGACATAATGGAGCT+GGG 0.560690 7_4:-22338882 Msa1145520:intron
TGTTGTGAGATCTCTTTCTG+GGG 0.565788 7_4:-22336213 Msa1145520:CDS
TCTTCTTCCTCCTACTTCTG+GGG 0.566644 7_4:-22338830 Msa1145520:CDS
CCAATTAACAAGAGAGGGAA+GGG 0.568509 7_4:+22343895 None:intergenic
TCATCTTAAAGGTTCTTCCA+AGG 0.569401 7_4:-22341346 Msa1145520:intron
TCCAATCAATGCGATTCCAA+GGG 0.570234 7_4:+22336172 None:intergenic
ATTTCTCGCGAAAAGTTCCA+TGG 0.570345 7_4:-22343711 Msa1145520:CDS
CATCTTAAAGGTTCTTCCAA+GGG 0.570396 7_4:-22341345 Msa1145520:intron
CCGCTGGAGCAACATATGGC+GGG 0.573033 7_4:-22341971 Msa1145520:intron
GTGTCATGAAATCCTAGAAG+AGG 0.573740 7_4:+22343736 None:intergenic
GCCAATTAACAAGAGAGGGA+AGG 0.575928 7_4:+22343894 None:intergenic
AAATTTAACTTTAGAACTGG+AGG 0.576030 7_4:+22341262 None:intergenic
AAAGAAGGACTCTATATGAT+GGG 0.577873 7_4:-22343254 Msa1145520:CDS
ATACTTGAATATATTATCCA+TGG 0.581080 7_4:+22342353 None:intergenic
AACAACAGGAGCTTGATGGC+AGG 0.581491 7_4:-22341154 Msa1145520:intron
TCGTCGTTGACAGAGTAATA+CGG 0.582435 7_4:+22342189 None:intergenic
ACAGTTTGCAGTTTCTTCTG+CGG 0.588492 7_4:-22342391 Msa1145520:intron
ATCAAAGCATCCCCAGAAGT+AGG 0.590326 7_4:+22338820 None:intergenic
AAGATGCCAATTAACAAGAG+AGG 0.595605 7_4:+22343889 None:intergenic
GTCATCAGTGTACTCTCGAG+TGG 0.599155 7_4:+22343648 None:intergenic
TATATGATGGGCTTAAATGA+CGG 0.599390 7_4:-22343242 Msa1145520:CDS
GCAATAGTAAAGGAAGTCAT+GGG 0.599487 7_4:-22343616 Msa1145520:CDS
GTTGTGAGATCTCTTTCTGG+GGG 0.601109 7_4:-22336212 Msa1145520:CDS
GCAAGAGTTCTGAGTCAGAA+GGG 0.601802 7_4:-22341235 Msa1145520:CDS
AGTATGGACTGCGATATCCA+TGG 0.605562 7_4:-22341322 Msa1145520:CDS
AAAGCATCCCCAGAAGTAGG+AGG 0.607193 7_4:+22338823 None:intergenic
GGCAAGAGTTCTGAGTCAGA+AGG 0.615898 7_4:-22341236 Msa1145520:CDS
ATGAAGAGGAAATTGTCCCT+TGG 0.620177 7_4:-22336188 Msa1145520:CDS
CAAGTATAGTGATAAGACAC+TGG 0.623232 7_4:-22342337 Msa1145520:CDS
GAACCCAGAGCAAATGCCGT+AGG 0.625258 7_4:+22342033 None:intergenic
TCATCAGTGTACTCTCGAGT+GGG 0.637387 7_4:+22343649 None:intergenic
TATTACTCTGTCAACGACGA+GGG 0.638970 7_4:-22342186 Msa1145520:CDS
TATGTTAGTAGGGTTAAACT+GGG 0.654025 7_4:+22343687 None:intergenic
GTATTACTCTGTCAACGACG+AGG 0.672603 7_4:-22342187 Msa1145520:CDS
GGTCATTACAGCTTGCACCA+TGG 0.733763 7_4:-22342370 Msa1145520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATTAT+TGG + chr7_4:22340037-22340056 None:intergenic 0.0%
!!! TAATATTATTATTATTATTT+TGG - chr7_4:22340990-22341009 Msa1145520:CDS 0.0%
!! TAAAAATAAGAAAGTAAAAA+AGG + chr7_4:22336628-22336647 None:intergenic 10.0%
!!! ATGTAACAAATTATTTTATT+TGG + chr7_4:22337412-22337431 None:intergenic 10.0%
!!! TAAAATAATTTGTTACATTA+TGG - chr7_4:22337414-22337433 Msa1145520:intron 10.0%
!! ATAATTCAAATATGAAAATT+TGG + chr7_4:22337890-22337909 None:intergenic 10.0%
!!! AATTATATTTTATTCATTTG+AGG - chr7_4:22337904-22337923 Msa1145520:intron 10.0%
!! TAAAACTAAGTAATAAAAAA+GGG + chr7_4:22341455-22341474 None:intergenic 10.0%
!! ATAAAACTAAGTAATAAAAA+AGG + chr7_4:22341456-22341475 None:intergenic 10.0%
!! GTTAAAAATAAAAGAAAACA+TGG + chr7_4:22336090-22336109 None:intergenic 15.0%
!!! ACATTATTTTCGAATATAAT+AGG - chr7_4:22336651-22336670 Msa1145520:intron 15.0%
!!! CATTATTTTCGAATATAATA+GGG - chr7_4:22336652-22336671 Msa1145520:intron 15.0%
!!! AATAAATTTTAATGATGTAC+AGG + chr7_4:22338483-22338502 None:intergenic 15.0%
!! ATAAAAAAACTTCATTCAAA+TGG + chr7_4:22338607-22338626 None:intergenic 15.0%
!!! TTTTTAAAAATAAAGTTCCA+TGG + chr7_4:22338702-22338721 None:intergenic 15.0%
!!! ATGGAACTTTATTTTTAAAA+AGG - chr7_4:22338701-22338720 Msa1145520:intron 15.0%
!!! TTATTTTTAAAAAGGATTTC+TGG - chr7_4:22338709-22338728 Msa1145520:intron 15.0%
!! TATATAGTAGTTGTATTATT+TGG - chr7_4:22339974-22339993 Msa1145520:intron 15.0%
!! ATATAGTAGTTGTATTATTT+GGG - chr7_4:22339975-22339994 Msa1145520:intron 15.0%
!! TTAAAATAATAAAAGGTGAT+AGG - chr7_4:22340170-22340189 Msa1145520:intron 15.0%
!!! ATTTTCATGTTAAATATTAG+TGG - chr7_4:22340204-22340223 Msa1145520:intron 15.0%
!!! TATAACTTTTCATATATTTC+AGG - chr7_4:22340886-22340905 Msa1145520:intron 15.0%
!!! TAAAACCTAGAATTTTTTTA+CGG - chr7_4:22340912-22340931 Msa1145520:intron 15.0%
!!! ATTATTTTGGTTTTTTTGTT+TGG - chr7_4:22341003-22341022 Msa1145520:CDS 15.0%
!! ATGAATATATTGTCAAAATT+CGG + chr7_4:22343034-22343053 None:intergenic 15.0%
!! AAAAAATCAGTAAATCTAAT+CGG + chr7_4:22343091-22343110 None:intergenic 15.0%
!! CTCTTAATCATAATTAAATA+AGG - chr7_4:22343577-22343596 Msa1145520:intron 15.0%
!! TTAAAATGAAAAAAGGTAAA+GGG + chr7_4:22343684-22343703 None:intergenic 15.0%
!!! TTTAAAATGAAAAAAGGTAA+AGG + chr7_4:22343685-22343704 None:intergenic 15.0%
!!! TCATTTTAAAAATTTTCTGT+TGG - chr7_4:22343695-22343714 Msa1145520:CDS 15.0%
!! GAATATAATAGGGATATAAA+AGG - chr7_4:22336662-22336681 Msa1145520:intron 20.0%
!!! TTGTTTTAATTTCTGCATTT+AGG - chr7_4:22336992-22337011 Msa1145520:intron 20.0%
!! AACAAAATGTAGCTTAAAAA+GGG + chr7_4:22337117-22337136 None:intergenic 20.0%
!!! GTTTCTTTTTCTTTATGTTA+AGG + chr7_4:22337229-22337248 None:intergenic 20.0%
!! TCTAGATTAAGAAATTATGT+TGG - chr7_4:22337564-22337583 Msa1145520:intron 20.0%
!! ATACTTGAATATATTATCCA+TGG + chr7_4:22337654-22337673 None:intergenic 20.0%
!!! TTATATCAACGTTTTTCAAA+AGG - chr7_4:22337741-22337760 Msa1145520:intron 20.0%
!!! TATATCAACGTTTTTCAAAA+GGG - chr7_4:22337742-22337761 Msa1145520:intron 20.0%
!! TAAATATATTAGTTATCGGA+AGG + chr7_4:22337865-22337884 None:intergenic 20.0%
!! GGACTAAATATATTAGTTAT+CGG + chr7_4:22337869-22337888 None:intergenic 20.0%
!!! ACTAAATGTTTTAGGAAATT+TGG + chr7_4:22338097-22338116 None:intergenic 20.0%
!!! GTACTAATTTGTATAACTTA+TGG - chr7_4:22338391-22338410 Msa1145520:intron 20.0%
!!! ATTTTTCAAATTGGTTTTTC+TGG - chr7_4:22338500-22338519 Msa1145520:intron 20.0%
!!! AGTAAATTTAACTTTAGAAC+TGG + chr7_4:22338748-22338767 None:intergenic 20.0%
!!! AGTTCTAAAGTTAAATTTAC+TGG - chr7_4:22338747-22338766 Msa1145520:intron 20.0%
!!! AGATTTTTTCCAAAACTTTT+AGG - chr7_4:22338937-22338956 Msa1145520:intron 20.0%
!! AATATATTCTAGTGATAGAA+GGG - chr7_4:22339166-22339185 Msa1145520:intron 20.0%
!!! CAAAACATTTTTAATAACCA+AGG - chr7_4:22339194-22339213 Msa1145520:intron 20.0%
!! CACTTTATAAATACATTGTT+AGG + chr7_4:22339465-22339484 None:intergenic 20.0%
!! CTAACAATGTATTTATAAAG+TGG - chr7_4:22339463-22339482 Msa1145520:intron 20.0%
!!! GTACTTCCTAATATTTTTAT+TGG - chr7_4:22340004-22340023 Msa1145520:intron 20.0%
!! AGCATACCAATAAAAATATT+AGG + chr7_4:22340013-22340032 None:intergenic 20.0%
!!! ACTCTGTTTTTTTCTATTTT+CGG + chr7_4:22340334-22340353 None:intergenic 20.0%
!! TGAACAAATTATGTTTACTA+TGG - chr7_4:22340710-22340729 Msa1145520:intron 20.0%
!!! TCATTTTGTTTTTGTTTTGT+AGG - chr7_4:22341106-22341125 Msa1145520:intron 20.0%
!!! AAATACCTTTTATTACACTA+TGG - chr7_4:22341357-22341376 Msa1145520:intron 20.0%
!!! AATACCTTTTATTACACTAT+GGG - chr7_4:22341358-22341377 Msa1145520:intron 20.0%
!! TTAAGCAACTTGATAAAAAT+AGG + chr7_4:22341414-22341433 None:intergenic 20.0%
!!! TAAAGTTTCATAGATTTTAG+GGG + chr7_4:22341611-22341630 None:intergenic 20.0%
!!! CTAAAGTTTCATAGATTTTA+GGG + chr7_4:22341612-22341631 None:intergenic 20.0%
!!! ACTAAAGTTTCATAGATTTT+AGG + chr7_4:22341613-22341632 None:intergenic 20.0%
!!! TACAATTTTTATGTTGCTAA+AGG - chr7_4:22341793-22341812 Msa1145520:intron 20.0%
!! GAAAATAACAAAAACATTTC+AGG + chr7_4:22341889-22341908 None:intergenic 20.0%
!! TGAATATATTGTCAAAATTC+GGG + chr7_4:22343033-22343052 None:intergenic 20.0%
!! AAAAATCAGTAAATCTAATC+GGG + chr7_4:22343090-22343109 None:intergenic 20.0%
!! TGTAAACTTATCTTGTTAAT+TGG - chr7_4:22343377-22343396 Msa1145520:intron 20.0%
!!! TTTTTAAGTTTCAACATTAG+TGG - chr7_4:22343420-22343439 Msa1145520:intron 20.0%
!!! TCTAGTGTTATTAAAAACAA+GGG + chr7_4:22343557-22343576 None:intergenic 20.0%
!! ATAATGTTTACATGGATAAA+TGG + chr7_4:22343646-22343665 None:intergenic 20.0%
!!! ACTAATGCATTGATATTTTC+TGG - chr7_4:22336156-22336175 Msa1145520:intron 25.0%
!!! ATTTTTCAATGTAACCTTTC+AGG - chr7_4:22336716-22336735 Msa1145520:intron 25.0%
! TAAATGAGAATATTTCACCA+GGG - chr7_4:22336902-22336921 Msa1145520:intron 25.0%
! AAGAAAGCTAAAGAAATTCA+AGG + chr7_4:22337070-22337089 None:intergenic 25.0%
! GAACAAAATGTAGCTTAAAA+AGG + chr7_4:22337118-22337137 None:intergenic 25.0%
!!! TTCACAAATGGTAGTTTTAA+AGG + chr7_4:22337328-22337347 None:intergenic 25.0%
!!! TGGTATATTTTGGATTGTTT+TGG + chr7_4:22337354-22337373 None:intergenic 25.0%
!! CATGACAAAATGGTATATTT+TGG + chr7_4:22337364-22337383 None:intergenic 25.0%
!! AATATACCATTTTGTCATGT+TGG - chr7_4:22337365-22337384 Msa1145520:intron 25.0%
! ATATACCCTTATACTATATC+TGG - chr7_4:22338236-22338255 Msa1145520:intron 25.0%
! CAAAATTATGCTCATCTTAA+AGG - chr7_4:22338647-22338666 Msa1145520:intron 25.0%
!!! AAATTTAACTTTAGAACTGG+AGG + chr7_4:22338745-22338764 None:intergenic 25.0%
! GAATATATTCTAGTGATAGA+AGG - chr7_4:22339165-22339184 Msa1145520:intron 25.0%
! ATATATTCTAGTGATAGAAG+GGG - chr7_4:22339167-22339186 Msa1145520:intron 25.0%
! ACTTATCTCTATTCTAACTT+TGG + chr7_4:22339371-22339390 None:intergenic 25.0%
! GATAAGTATATCTAAGAACT+AGG - chr7_4:22339384-22339403 Msa1145520:intron 25.0%
! ACAATGTATTTATAAAGTGG+TGG - chr7_4:22339466-22339485 Msa1145520:intron 25.0%
! CAATGTATTTATAAAGTGGT+GGG - chr7_4:22339467-22339486 Msa1145520:intron 25.0%
! ACCCAACAATGAATTTATAA+GGG - chr7_4:22339692-22339711 Msa1145520:intron 25.0%
! TTCATGATACATTCATGTAT+TGG + chr7_4:22340654-22340673 None:intergenic 25.0%
! TTATTCAAAGCTATCTATCA+AGG - chr7_4:22340852-22340871 Msa1145520:intron 25.0%
! TTAGTCCGTAAAAAAATTCT+AGG + chr7_4:22340920-22340939 None:intergenic 25.0%
!!! ATTTTTTTACGGACTAAAAC+CGG - chr7_4:22340923-22340942 Msa1145520:intron 25.0%
!!! TATGATCGTCTCTTTTAATT+TGG - chr7_4:22341042-22341061 Msa1145520:CDS 25.0%
!!! TTTTGTTTTGTAGGACATAA+TGG - chr7_4:22341115-22341134 Msa1145520:intron 25.0%
!! ATACCTTTTATTACACTATG+GGG - chr7_4:22341359-22341378 Msa1145520:intron 25.0%
!!! ATTTTAGGGGTTAATTACAT+GGG + chr7_4:22341598-22341617 None:intergenic 25.0%
!!! AGTTAGTTTCCTAGATTTTA+AGG - chr7_4:22341630-22341649 Msa1145520:intron 25.0%
!!! GTTAGTTTCCTAGATTTTAA+GGG - chr7_4:22341631-22341650 Msa1145520:intron 25.0%
! AGAGAGATGAATCTTATTAA+GGG + chr7_4:22341726-22341745 None:intergenic 25.0%
! AATATGTCTCAATTTGGATT+TGG - chr7_4:22341819-22341838 Msa1145520:CDS 25.0%
! ATAACAAAAACATTTCAGGA+AGG + chr7_4:22341885-22341904 None:intergenic 25.0%
! GAAATAGTATATCATGTTGA+GGG + chr7_4:22342001-22342020 None:intergenic 25.0%
! TCTGTATTATTTCATCTTCA+CGG - chr7_4:22342209-22342228 Msa1145520:CDS 25.0%
!! TATAGATCTGAAACCTATAT+TGG - chr7_4:22342285-22342304 Msa1145520:CDS 25.0%
! ATACAATTGCATACCAATAT+AGG + chr7_4:22342301-22342320 None:intergenic 25.0%
! ATATTGGTATGCAATTGTAT+TGG - chr7_4:22342301-22342320 Msa1145520:CDS 25.0%
!! AAACCAACGTTTTTAAATAG+CGG + chr7_4:22342568-22342587 None:intergenic 25.0%
!!! ATCTCAGTGTTGTTTATAAA+AGG + chr7_4:22342649-22342668 None:intergenic 25.0%
! GAATATATTGTCAAAATTCG+GGG + chr7_4:22343032-22343051 None:intergenic 25.0%
! AAATCTAATCGGGAAATTAA+AGG + chr7_4:22343080-22343099 None:intergenic 25.0%
! AGAACTATTTGCCATATTAA+AGG - chr7_4:22343194-22343213 Msa1145520:intron 25.0%
! GAACTATTTGCCATATTAAA+GGG - chr7_4:22343195-22343214 Msa1145520:intron 25.0%
!! TCAATCATACTTACAGATTT+TGG + chr7_4:22343312-22343331 None:intergenic 25.0%
!!! TAGATTTGTTGATCATTTCA+AGG - chr7_4:22343334-22343353 Msa1145520:intron 25.0%
!!! AGATTTGTTGATCATTTCAA+GGG - chr7_4:22343335-22343354 Msa1145520:intron 25.0%
! ATGTAAATCTTGAAGTCATA+GGG - chr7_4:22343454-22343473 Msa1145520:intron 25.0%
!! GTCTAGTGTTATTAAAAACA+AGG + chr7_4:22343558-22343577 None:intergenic 25.0%
! ATAATTTCTATTGCTTGAAC+AGG - chr7_4:22343743-22343762 Msa1145520:CDS 25.0%
AAGAGGAAGATTTACAGTTT+CGG + chr7_4:22336254-22336273 None:intergenic 30.0%
TATGTTAGTAGGGTTAAACT+GGG + chr7_4:22336320-22336339 None:intergenic 30.0%
TTGTATGTGCAGGTATTTAT+TGG - chr7_4:22336490-22336509 Msa1145520:intron 30.0%
TGTATGTGCAGGTATTTATT+GGG - chr7_4:22336491-22336510 Msa1145520:intron 30.0%
CAAACACAGAATAACTTATC+AGG + chr7_4:22336538-22336557 None:intergenic 30.0%
AAGTTATTCTGTGTTTGAGA+AGG - chr7_4:22336541-22336560 Msa1145520:intron 30.0%
AGGAAACAGCAAATAATGAA+GGG + chr7_4:22336608-22336627 None:intergenic 30.0%
AAGGAAACAGCAAATAATGA+AGG + chr7_4:22336609-22336628 None:intergenic 30.0%
! TTTGATCTTTTGTTCCTGAA+AGG + chr7_4:22336733-22336752 None:intergenic 30.0%
AAAGAAGGACTCTATATGAT+GGG - chr7_4:22336750-22336769 Msa1145520:intron 30.0%
!! TATATGATGGGCTTAAATGA+CGG - chr7_4:22336762-22336781 Msa1145520:intron 30.0%
GTGAAATATTCTCATTTAGG+AGG + chr7_4:22336900-22336919 None:intergenic 30.0%
CTGGTGAAATATTCTCATTT+AGG + chr7_4:22336903-22336922 None:intergenic 30.0%
CTAAATGAGAATATTTCACC+AGG - chr7_4:22336901-22336920 Msa1145520:intron 30.0%
! TTTGGCTTCTCATTCTTAAA+TGG - chr7_4:22336962-22336981 Msa1145520:intron 30.0%
AAGCTAAAGAAATTCAAGGT+CGG + chr7_4:22337066-22337085 None:intergenic 30.0%
! AGCTTTCTTTTCTTTGCAAA+AGG - chr7_4:22337081-22337100 Msa1145520:intron 30.0%
! TCTTTTCTTTGCAAAAGGAT+TGG - chr7_4:22337086-22337105 Msa1145520:intron 30.0%
! CTTTTCTTTGCAAAAGGATT+GGG - chr7_4:22337087-22337106 Msa1145520:intron 30.0%
!! GTCATTTTCTCTGTTTTAAG+AGG - chr7_4:22337147-22337166 Msa1145520:intron 30.0%
!! TGTTAAGGTGTCGAATAAAA+GGG + chr7_4:22337214-22337233 None:intergenic 30.0%
!! ATGTTAAGGTGTCGAATAAA+AGG + chr7_4:22337215-22337234 None:intergenic 30.0%
! TTTGCCTACTTCTTCATTTT+TGG - chr7_4:22337692-22337711 Msa1145520:intron 30.0%
!! TTGCCTACTTCTTCATTTTT+GGG - chr7_4:22337693-22337712 Msa1145520:intron 30.0%
!! TCCTAAAACATTTAGTTTGC+AGG - chr7_4:22338101-22338120 Msa1145520:intron 30.0%
! TCCTGCAAACTAAATGTTTT+AGG + chr7_4:22338105-22338124 None:intergenic 30.0%
AATTGGACTGTATTTCGATA+AGG - chr7_4:22338191-22338210 Msa1145520:intron 30.0%
CTAGTCCAGATATAGTATAA+GGG + chr7_4:22338244-22338263 None:intergenic 30.0%
TCTAGTCCAGATATAGTATA+AGG + chr7_4:22338245-22338264 None:intergenic 30.0%
GGATTAAGTGTTCAATACAT+TGG + chr7_4:22338441-22338460 None:intergenic 30.0%
! TTGAATGCACCTAAAAGTTT+TGG + chr7_4:22338949-22338968 None:intergenic 30.0%
TCAAATCAGGAATTTGCATA+AGG - chr7_4:22338965-22338984 Msa1145520:intron 30.0%
AAGGTGTATGCTACTAAAAA+AGG - chr7_4:22338984-22339003 Msa1145520:intron 30.0%
! AATCAGATTCTTGCTCTTTT+AGG - chr7_4:22339050-22339069 Msa1145520:intron 30.0%
! AGAGTTCTCTTACTCTATTT+TGG - chr7_4:22339131-22339150 Msa1145520:intron 30.0%
! GAGTTCTCTTACTCTATTTT+GGG - chr7_4:22339132-22339151 Msa1145520:intron 30.0%
! GGTTTGTTTATTACTTCAGT+TGG + chr7_4:22339259-22339278 None:intergenic 30.0%
CTGAAGTAATAAACAAACCT+TGG - chr7_4:22339260-22339279 Msa1145520:intron 30.0%
ATTATCATCAATATCGACCA+AGG + chr7_4:22339280-22339299 None:intergenic 30.0%
! TCTTACAAGTTGACTTTGTA+AGG - chr7_4:22339499-22339518 Msa1145520:intron 30.0%
! CTTACAAGTTGACTTTGTAA+GGG - chr7_4:22339500-22339519 Msa1145520:intron 30.0%
TCGATACCATCTTACAATTT+GGG + chr7_4:22339541-22339560 None:intergenic 30.0%
TTCGATACCATCTTACAATT+TGG + chr7_4:22339542-22339561 None:intergenic 30.0%
GACCCAACAATGAATTTATA+AGG - chr7_4:22339691-22339710 Msa1145520:intron 30.0%
CCCCTTATAAATTCATTGTT+GGG + chr7_4:22339696-22339715 None:intergenic 30.0%
CCCAACAATGAATTTATAAG+GGG - chr7_4:22339693-22339712 Msa1145520:intron 30.0%
ACCCCTTATAAATTCATTGT+TGG + chr7_4:22339697-22339716 None:intergenic 30.0%
AACAATGAATTTATAAGGGG+TGG - chr7_4:22339696-22339715 Msa1145520:intron 30.0%
ACAATGAATTTATAAGGGGT+GGG - chr7_4:22339697-22339716 Msa1145520:intron 30.0%
!! TTAGTGGACATTGCTTTTAT+AGG - chr7_4:22340220-22340239 Msa1145520:intron 30.0%
CTACTACCAATACTCAATTT+GGG + chr7_4:22340366-22340385 None:intergenic 30.0%
ACTACTACCAATACTCAATT+TGG + chr7_4:22340367-22340386 None:intergenic 30.0%
TATGTAGCTGTATCACATTT+AGG - chr7_4:22340470-22340489 Msa1145520:intron 30.0%
TACATGAATGTATCATGAAC+CGG - chr7_4:22340655-22340674 Msa1145520:intron 30.0%
!! CATAATTTGTTCATGTGACT+AGG + chr7_4:22340703-22340722 None:intergenic 30.0%
!!! TGGTTTTTTTGTTTGGCTTT+AGG - chr7_4:22341010-22341029 Msa1145520:CDS 30.0%
! CTACAAATGTGTTTGCTAAT+AGG - chr7_4:22341260-22341279 Msa1145520:CDS 30.0%
!! TTTTAGGGGTTAATTACATG+GGG + chr7_4:22341597-22341616 None:intergenic 30.0%
!! GATTTTAGGGGTTAATTACA+TGG + chr7_4:22341599-22341618 None:intergenic 30.0%
GAGAGAGATGAATCTTATTA+AGG + chr7_4:22341727-22341746 None:intergenic 30.0%
AGGTGTAATATGTCTCAATT+TGG - chr7_4:22341813-22341832 Msa1145520:intron 30.0%
! TTGTGTCATTCATTATGTCA+TGG - chr7_4:22341933-22341952 Msa1145520:intron 30.0%
!! TTGTTTTGTAGGATGAGATA+CGG - chr7_4:22341958-22341977 Msa1145520:intron 30.0%
GGAAATAGTATATCATGTTG+AGG + chr7_4:22342002-22342021 None:intergenic 30.0%
AGATGCTCAGGTTATAAATT+AGG + chr7_4:22342171-22342190 None:intergenic 30.0%
CTGTATTATTTCATCTTCAC+GGG - chr7_4:22342210-22342229 Msa1145520:CDS 30.0%
TCATGACAAGTACATAGTAA+TGG + chr7_4:22342245-22342264 None:intergenic 30.0%
GTGCTATAGATTCTATTCAA+TGG - chr7_4:22342481-22342500 Msa1145520:intron 30.0%
TATCCGCTATTTAAAAACGT+TGG - chr7_4:22342562-22342581 Msa1145520:intron 30.0%
TGATACCATGTCAAAATTTG+GGG + chr7_4:22342806-22342825 None:intergenic 30.0%
CTGATACCATGTCAAAATTT+GGG + chr7_4:22342807-22342826 None:intergenic 30.0%
TCTGATACCATGTCAAAATT+TGG + chr7_4:22342808-22342827 None:intergenic 30.0%
CCTATCATTGATCAATCATT+GGG - chr7_4:22342829-22342848 Msa1145520:intron 30.0%
TAATCGGGAAATTAAAGGTT+TGG + chr7_4:22343075-22343094 None:intergenic 30.0%
! TTTTACTGAGTACAATATGC+TGG - chr7_4:22343136-22343155 Msa1145520:intron 30.0%
TTTACTGAGTACAATATGCT+GGG - chr7_4:22343137-22343156 Msa1145520:intron 30.0%
!! GGAAAGCGTTGTTATAAATA+TGG - chr7_4:22343236-22343255 Msa1145520:CDS 30.0%
GTTAATTGGTATACTGTTTC+TGG - chr7_4:22343391-22343410 Msa1145520:intron 30.0%
CATGTAAATCTTGAAGTCAT+AGG - chr7_4:22343453-22343472 Msa1145520:intron 30.0%
! GTGTTATTAAAAACAAGGGA+AGG + chr7_4:22343553-22343572 None:intergenic 30.0%
AACTAATCGTGACAATTACT+AGG - chr7_4:22343601-22343620 Msa1145520:intron 30.0%
AGATGCCAATTAACAAGAGA+GGG + chr7_4:22336117-22336136 None:intergenic 35.0%
AAGATGCCAATTAACAAGAG+AGG + chr7_4:22336118-22336137 None:intergenic 35.0%
!! GGCATCTTCTTCACTTTTAT+TGG - chr7_4:22336130-22336149 Msa1145520:intron 35.0%
ACTGTAAATCTTCCTCTTCT+AGG - chr7_4:22336256-22336275 Msa1145520:intron 35.0%
GTATGTTAGTAGGGTTAAAC+TGG + chr7_4:22336321-22336340 None:intergenic 35.0%
GAGCTATTCGTATGTTAGTA+GGG + chr7_4:22336330-22336349 None:intergenic 35.0%
GCAATAGTAAAGGAAGTCAT+GGG - chr7_4:22336388-22336407 Msa1145520:intron 35.0%
TAACAAGAACTTGTATGTGC+AGG - chr7_4:22336480-22336499 Msa1145520:intron 35.0%
GTATGTGCAGGTATTTATTG+GGG - chr7_4:22336492-22336511 Msa1145520:intron 35.0%
ATTCTGTGTTTGAGAAGGTT+TGG - chr7_4:22336546-22336565 Msa1145520:intron 35.0%
! GGTTTGGTTGTCTTAATGTT+TGG - chr7_4:22336562-22336581 Msa1145520:intron 35.0%
CAGGAACAAAAGATCAAAGA+AGG - chr7_4:22336735-22336754 Msa1145520:intron 35.0%
CAAAGAAGGACTCTATATGA+TGG - chr7_4:22336749-22336768 Msa1145520:intron 35.0%
AAGTAAAAACCTGTAGCAGA+TGG + chr7_4:22336843-22336862 None:intergenic 35.0%
!!! TTGTTTTGGCACTTCACAAA+TGG + chr7_4:22337340-22337359 None:intergenic 35.0%
TTTGGTACAGTTTAACCACT+AGG + chr7_4:22337394-22337413 None:intergenic 35.0%
TGTTCAGCACATAAAACTTC+TGG + chr7_4:22337503-22337522 None:intergenic 35.0%
CAAGTATAGTGATAAGACAC+TGG - chr7_4:22337667-22337686 Msa1145520:intron 35.0%
AAGCCCAAAAATGAAGAAGT+AGG + chr7_4:22337699-22337718 None:intergenic 35.0%
TGGACCAATAGTAAAAGCAA+GGG + chr7_4:22338077-22338096 None:intergenic 35.0%
TTGGACCAATAGTAAAAGCA+AGG + chr7_4:22338078-22338097 None:intergenic 35.0%
! TCTGGACTAGAATTGAAATG+CGG - chr7_4:22338254-22338273 Msa1145520:intron 35.0%
TCATCTTAAAGGTTCTTCCA+AGG - chr7_4:22338658-22338677 Msa1145520:intron 35.0%
CATCTTAAAGGTTCTTCCAA+GGG - chr7_4:22338659-22338678 Msa1145520:intron 35.0%
AAGCTTAGACATGAAACAAC+AGG - chr7_4:22338836-22338855 Msa1145520:CDS 35.0%
!! CTTTTAGGTGCATTCAAATC+AGG - chr7_4:22338952-22338971 Msa1145520:intron 35.0%
!! CTTGCTCTTTTAGGTAAGTA+TGG - chr7_4:22339059-22339078 Msa1145520:intron 35.0%
! AAGGAAGTGTGTAGTTGTAA+CGG - chr7_4:22339213-22339232 Msa1145520:intron 35.0%
! TTGTAACGGGGAGATTTAAT+TGG - chr7_4:22339227-22339246 Msa1145520:intron 35.0%
! TGTAACGGGGAGATTTAATT+GGG - chr7_4:22339228-22339247 Msa1145520:intron 35.0%
! GGTCGATATTGATGATAATC+TGG - chr7_4:22339281-22339300 Msa1145520:intron 35.0%
! TTTTGTCATCAACCTTCACA+TGG - chr7_4:22339336-22339355 Msa1145520:intron 35.0%
! GACATATAGCTTGCATTTAG+TGG + chr7_4:22339415-22339434 None:intergenic 35.0%
! ACCATCTTACAATTTGGGTT+AGG + chr7_4:22339536-22339555 None:intergenic 35.0%
TTGTGTTAAGAGTCCTACAT+TGG - chr7_4:22339659-22339678 Msa1145520:intron 35.0%
GGTCATATTTCATCCAATGT+AGG + chr7_4:22339675-22339694 None:intergenic 35.0%
!!! TCTTACAAGCTGGTTTTGTA+CGG - chr7_4:22339729-22339748 Msa1145520:intron 35.0%
!! CGTTGATAGTCTCAGAATTT+GGG + chr7_4:22339766-22339785 None:intergenic 35.0%
!! CCAAATTCTGAGACTATCAA+CGG - chr7_4:22339764-22339783 Msa1145520:intron 35.0%
!! CAAATTCTGAGACTATCAAC+GGG - chr7_4:22339765-22339784 Msa1145520:intron 35.0%
!! AAATTCTGAGACTATCAACG+GGG - chr7_4:22339766-22339785 Msa1145520:intron 35.0%
! AGTTGTATTATTTGGGTTCG+TGG - chr7_4:22339982-22340001 Msa1145520:intron 35.0%
ATATGTGACTACTCTGTAAG+AGG + chr7_4:22340309-22340328 None:intergenic 35.0%
AGTAGTCCCAAATTGAGTAT+TGG - chr7_4:22340357-22340376 Msa1145520:intron 35.0%
! CTTTGAAAAGCTTACACTGA+AGG + chr7_4:22340392-22340411 None:intergenic 35.0%
! CTTCAGTGTAAGCTTTTCAA+AGG - chr7_4:22340390-22340409 Msa1145520:intron 35.0%
! GCTTTTCAAAGGAACAAAGA+CGG - chr7_4:22340401-22340420 Msa1145520:intron 35.0%
! ATTTTCTTGACACACCGATA+TGG + chr7_4:22340428-22340447 None:intergenic 35.0%
TATCACATTTAGGTGTGAGT+GGG - chr7_4:22340480-22340499 Msa1145520:intron 35.0%
GATATAGCTGTATCGCATTT+AGG - chr7_4:22340537-22340556 Msa1145520:intron 35.0%
TTTGAATAAAGAGTCCCCAA+TGG + chr7_4:22340841-22340860 None:intergenic 35.0%
TTCAAAGCTATCTATCAAGG+AGG - chr7_4:22340855-22340874 Msa1145520:intron 35.0%
TTTGTAATATACCCCATCTC+CGG + chr7_4:22340945-22340964 None:intergenic 35.0%
GATCCCCATAGTGTAATAAA+AGG + chr7_4:22341365-22341384 None:intergenic 35.0%
! GGAAATTATGGTTTGCAAGT+CGG + chr7_4:22341495-22341514 None:intergenic 35.0%
ACTTGCAAACCATAATTTCC+AGG - chr7_4:22341495-22341514 Msa1145520:intron 35.0%
CTTGCAAACCATAATTTCCA+GGG - chr7_4:22341496-22341515 Msa1145520:intron 35.0%
TTGCAAACCATAATTTCCAG+GGG - chr7_4:22341497-22341516 Msa1145520:intron 35.0%
CTTAAAAAATTTGACACCCC+TGG + chr7_4:22341516-22341535 None:intergenic 35.0%
!!! CAGGGGTGTCAAATTTTTTA+AGG - chr7_4:22341514-22341533 Msa1145520:intron 35.0%
! TACAGTAAGATTTTGTGAGC+TGG + chr7_4:22341553-22341572 None:intergenic 35.0%
!! GTTTCCTAGATTTTAAGGGT+TGG - chr7_4:22341635-22341654 Msa1145520:intron 35.0%
GTAACCAACCCTTAAAATCT+AGG + chr7_4:22341642-22341661 None:intergenic 35.0%
!!! ATGTCATGGTCTTGTTTTGT+AGG - chr7_4:22341947-22341966 Msa1145520:intron 35.0%
CTTCTACTTACAGTCAATTC+GGG + chr7_4:22342023-22342042 None:intergenic 35.0%
GCTTCTACTTACAGTCAATT+CGG + chr7_4:22342024-22342043 None:intergenic 35.0%
TGCATTAAGCCAAGAGAAAA+CGG + chr7_4:22342132-22342151 None:intergenic 35.0%
TACCATGTATATACTGCTCT+TGG - chr7_4:22342391-22342410 Msa1145520:intron 35.0%
AACCAAGAGCAGTATATACA+TGG + chr7_4:22342396-22342415 None:intergenic 35.0%
TTTCCCATTGTTGTCAATTG+TGG - chr7_4:22342416-22342435 Msa1145520:intron 35.0%
GATCCACAATTGACAACAAT+GGG + chr7_4:22342422-22342441 None:intergenic 35.0%
AGATCCACAATTGACAACAA+TGG + chr7_4:22342423-22342442 None:intergenic 35.0%
TTGTTGTCAATTGTGGATCT+CGG - chr7_4:22342423-22342442 Msa1145520:intron 35.0%
CTATACGATACAATCAGTGA+TGG + chr7_4:22342618-22342637 None:intergenic 35.0%
GAATCTTATCTATCCGATGT+GGG + chr7_4:22342715-22342734 None:intergenic 35.0%
AGAATCTTATCTATCCGATG+TGG + chr7_4:22342716-22342735 None:intergenic 35.0%
CTTGAGAAGAGTTTATAGAG+AGG - chr7_4:22342734-22342753 Msa1145520:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr7_4:22342781-22342800 None:intergenic 35.0%
GATACCATGTCAAAATTTGG+GGG + chr7_4:22342805-22342824 None:intergenic 35.0%
GCCTATCATTGATCAATCAT+TGG - chr7_4:22342828-22342847 Msa1145520:intron 35.0%
CCCAATGATTGATCAATGAT+AGG + chr7_4:22342832-22342851 None:intergenic 35.0%
CTTGAGAAGAGTTTATAGAG+AGG - chr7_4:22342734-22342753 Msa1145520:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr7_4:22342781-22342800 None:intergenic 35.0%
TTCCTCAACACCCTTTAATA+TGG + chr7_4:22343208-22343227 None:intergenic 35.0%
TGTTATAAATATGGCCGATG+AGG - chr7_4:22343245-22343264 Msa1145520:CDS 35.0%
GAATTATGAACACACCTCAT+CGG + chr7_4:22343262-22343281 None:intergenic 35.0%
CATAGGGTTCAAGATAAAGA+AGG - chr7_4:22343470-22343489 Msa1145520:CDS 35.0%
AAAAAAGGTAAAGGGAGAGT+GGG + chr7_4:22343676-22343695 None:intergenic 35.0%
ATTTCTATTGCTTGAACAGG+TGG - chr7_4:22343746-22343765 Msa1145520:CDS 35.0%
TTTCTATTGCTTGAACAGGT+GGG - chr7_4:22343747-22343766 Msa1145520:CDS 35.0%
!! CGCATTGATTGGAAATAGTA+AGG - chr7_4:22343842-22343861 Msa1145520:five_prime_UTR 35.0%
! TTTTGTATGTTGAGCAGAAC+TGG - chr7_4:22343894-22343913 Msa1145520:five_prime_UTR 35.0%
CTGGAATAGTTGGACTTATT+TGG - chr7_4:22343913-22343932 Msa1145520:five_prime_UTR 35.0%
AATAGTTGGACTTATTTGGC+AGG - chr7_4:22343917-22343936 Msa1145520:five_prime_UTR 35.0%
CCAATTAACAAGAGAGGGAA+GGG + chr7_4:22336112-22336131 None:intergenic 40.0%
TGAACGAATCAACCATTTGC+TGG + chr7_4:22336192-22336211 None:intergenic 40.0%
TCGGCACTCAAGTTTAATTC+AGG + chr7_4:22336235-22336254 None:intergenic 40.0%
GTGTCATGAAATCCTAGAAG+AGG + chr7_4:22336271-22336290 None:intergenic 40.0%
ATTTCTCGCGAAAAGTTCCA+TGG - chr7_4:22336293-22336312 Msa1145520:intron 40.0%
GGAGCTATTCGTATGTTAGT+AGG + chr7_4:22336331-22336350 None:intergenic 40.0%
TGACTTCCTTTACTATTGCC+TGG + chr7_4:22336387-22336406 None:intergenic 40.0%
GGCAATAGTAAAGGAAGTCA+TGG - chr7_4:22336387-22336406 Msa1145520:intron 40.0%
TAACTTATCAGGCGAGAAAC+TGG + chr7_4:22336527-22336546 None:intergenic 40.0%
ACGGCATATTTCATCTCTCT+TGG - chr7_4:22336781-22336800 Msa1145520:intron 40.0%
GTTTGTCACATATGCTTTGC+AGG - chr7_4:22336803-22336822 Msa1145520:intron 40.0%
ATGTCCGTTGTTCTGTGATT+TGG - chr7_4:22336944-22336963 Msa1145520:intron 40.0%
GAAGCCAAATCACAGAACAA+CGG + chr7_4:22336951-22336970 None:intergenic 40.0%
AGGACTCCAACATGACAAAA+TGG + chr7_4:22337374-22337393 None:intergenic 40.0%
!! CACATAAAACTTCTGGCTTG+AGG + chr7_4:22337496-22337515 None:intergenic 40.0%
ACAGTTTGCAGTTTCTTCTG+CGG - chr7_4:22337613-22337632 Msa1145520:intron 40.0%
! GTTGGAACTCTGTCATTTCT+TGG - chr7_4:22337782-22337801 Msa1145520:intron 40.0%
GACAGAGTAATACGGCAAAA+AGG + chr7_4:22337810-22337829 None:intergenic 40.0%
TCGTCGTTGACAGAGTAATA+CGG + chr7_4:22337818-22337837 None:intergenic 40.0%
TATTACTCTGTCAACGACGA+GGG - chr7_4:22337818-22337837 Msa1145520:intron 40.0%
AACCTTCAAGATCCTGAGTT+AGG + chr7_4:22337933-22337952 None:intergenic 40.0%
!! AGGTCCCTTGCTTTTACTAT+TGG - chr7_4:22338070-22338089 Msa1145520:intron 40.0%
!! TTTAGTTTGCAGGAGTCTTC+TGG - chr7_4:22338111-22338130 Msa1145520:intron 40.0%
ACACTGCTCTATTGTGCAAT+TGG - chr7_4:22338174-22338193 Msa1145520:intron 40.0%
CAGTGTCCTTATCTCCTATT+TGG - chr7_4:22338284-22338303 Msa1145520:intron 40.0%
GACTTCATGTAGACATATGC+AGG + chr7_4:22338312-22338331 None:intergenic 40.0%
CCTACTAAGTAGCAAAGAAC+TGG + chr7_4:22338334-22338353 None:intergenic 40.0%
! CCAGTTCTTTGCTACTTAGT+AGG - chr7_4:22338331-22338350 Msa1145520:intron 40.0%
GCTACTTAGTAGGTAGAAAG+AGG - chr7_4:22338341-22338360 Msa1145520:intron 40.0%
GGAATACACTAGTTAGAGAC+AGG + chr7_4:22338462-22338481 None:intergenic 40.0%
!! AAGCTTATTGCTTCTAGAGC+AGG + chr7_4:22338822-22338841 None:intergenic 40.0%
ATGAAACAACAGGAGCTTGA+TGG - chr7_4:22338846-22338865 Msa1145520:CDS 40.0%
GTTACAACTACACACTTCCT+TGG + chr7_4:22339214-22339233 None:intergenic 40.0%
! AGGAAGTGTGTAGTTGTAAC+GGG - chr7_4:22339214-22339233 Msa1145520:intron 40.0%
ATATGTCAAGAGCTCCACAT+TGG - chr7_4:22339428-22339447 Msa1145520:intron 40.0%
AGGTCATATCTCATCCAATG+TGG + chr7_4:22339445-22339464 None:intergenic 40.0%
GACTTTGTAAGGGTTGAGTT+AGG - chr7_4:22339510-22339529 Msa1145520:intron 40.0%
GCCTAACCCAAATTGTAAGA+TGG - chr7_4:22339532-22339551 Msa1145520:intron 40.0%
GAAGTCTATCCAAGATTCGT+TGG - chr7_4:22339559-22339578 Msa1145520:intron 40.0%
! GATAGTGGTAACTTGATAGC+AGG + chr7_4:22339589-22339608 None:intergenic 40.0%
GTTGTCTTCATCTTACAAGC+TGG - chr7_4:22339719-22339738 Msa1145520:intron 40.0%
!!! CTTACAAGCTGGTTTTGTAC+GGG - chr7_4:22339730-22339749 Msa1145520:intron 40.0%
!! CCGTTGATAGTCTCAGAATT+TGG + chr7_4:22339767-22339786 None:intergenic 40.0%
!! AATTCTGAGACTATCAACGG+GGG - chr7_4:22339767-22339786 Msa1145520:intron 40.0%
! AGTGACTTGGATATCATGGT+CGG + chr7_4:22339842-22339861 None:intergenic 40.0%
! TGACAGTGACTTGGATATCA+TGG + chr7_4:22339846-22339865 None:intergenic 40.0%
AATTACGAACCAGGTGACTT+TGG + chr7_4:22339891-22339910 None:intergenic 40.0%
! ACCTGGTTCGTAATTCACTT+TGG - chr7_4:22339896-22339915 Msa1145520:intron 40.0%
ACCAAAGTGAATTACGAACC+AGG + chr7_4:22339900-22339919 None:intergenic 40.0%
TCGTAATTCACTTTGGTACG+TGG - chr7_4:22339903-22339922 Msa1145520:intron 40.0%
ATTCACTTTGGTACGTGGTA+CGG - chr7_4:22339908-22339927 Msa1145520:intron 40.0%
GTATCACATTTAGGTGTGAG+TGG - chr7_4:22340479-22340498 Msa1145520:intron 40.0%
ATCACATTTAGGTGTGAGTG+GGG - chr7_4:22340481-22340500 Msa1145520:intron 40.0%
TATCGCATTTAGGTGTGAGT+GGG - chr7_4:22340547-22340566 Msa1145520:intron 40.0%
GCACTCTACAATGGTTTACT+TGG - chr7_4:22340751-22340770 Msa1145520:intron 40.0%
! AATGGTTTACTTGGCCTTTC+TGG - chr7_4:22340760-22340779 Msa1145520:intron 40.0%
! TTTGTAGGACATAATGGAGC+TGG - chr7_4:22341121-22341140 Msa1145520:intron 40.0%
! TTGTAGGACATAATGGAGCT+GGG - chr7_4:22341122-22341141 Msa1145520:intron 40.0%
ACGACGATATCAATGCTTGT+TGG - chr7_4:22341151-22341170 Msa1145520:intron 40.0%
!! TCTGGGGATGCTTTGATTTT+TGG - chr7_4:22341190-22341209 Msa1145520:CDS 40.0%
TTTGACACCCCTGGAAATTA+TGG + chr7_4:22341507-22341526 None:intergenic 40.0%
TTAATTACATGGGGAGGTAG+AGG + chr7_4:22341588-22341607 None:intergenic 40.0%
!!! TTTTAAGGGTTGGTTACACG+TGG - chr7_4:22341645-22341664 Msa1145520:intron 40.0%
TTTGTAGGATGAGATACGGA+AGG - chr7_4:22341962-22341981 Msa1145520:intron 40.0%
! GATGAGATACGGAAGGTTTT+GGG - chr7_4:22341969-22341988 Msa1145520:intron 40.0%
AAAACACTCACTAGATGCTC+AGG + chr7_4:22342183-22342202 None:intergenic 40.0%
! CGAGAAATTTTGGATGGAAG+GGG + chr7_4:22342593-22342612 None:intergenic 40.0%
! CCGAGAAATTTTGGATGGAA+GGG + chr7_4:22342594-22342613 None:intergenic 40.0%
CCCTTCCATCCAAAATTTCT+CGG - chr7_4:22342591-22342610 Msa1145520:intron 40.0%
! ACCGAGAAATTTTGGATGGA+AGG + chr7_4:22342595-22342614 None:intergenic 40.0%
! ATGGACCGAGAAATTTTGGA+TGG + chr7_4:22342599-22342618 None:intergenic 40.0%
!!! AGTGATGGACCGAGAAATTT+TGG + chr7_4:22342603-22342622 None:intergenic 40.0%
ATATGTTAGCAGCCAACACT+CGG - chr7_4:22342679-22342698 Msa1145520:intron 40.0%
GAGAAGAGTTTATAGAGAGG+AGG - chr7_4:22342737-22342756 Msa1145520:intron 40.0%
!! TAGACCCCCAAATTTTGACA+TGG - chr7_4:22342798-22342817 Msa1145520:intron 40.0%
GAATCCTATCTATCCGATGT+GGG + chr7_4:22342942-22342961 None:intergenic 40.0%
AGAATCCTATCTATCCGATG+TGG + chr7_4:22342943-22342962 None:intergenic 40.0%
GAGAAGAGTTTATAGAGAGG+AGG - chr7_4:22342737-22342756 Msa1145520:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr7_4:22342779-22342798 Msa1145520:intron 40.0%
!! TGCCATATTAAAGGGTGTTG+AGG - chr7_4:22343203-22343222 Msa1145520:CDS 40.0%
GAGGCAGGATAATGTTTACA+TGG + chr7_4:22343654-22343673 None:intergenic 40.0%
GAAAAAAGGTAAAGGGAGAG+TGG + chr7_4:22343677-22343696 None:intergenic 40.0%
!!! CAGTGTTGATTTTATCAGCC+AGG + chr7_4:22343773-22343792 None:intergenic 40.0%
ACTGTTGTGAGATCTCTTTC+TGG - chr7_4:22343789-22343808 Msa1145520:CDS 40.0%
CTGTTGTGAGATCTCTTTCT+GGG - chr7_4:22343790-22343809 Msa1145520:CDS 40.0%
TGTTGTGAGATCTCTTTCTG+GGG - chr7_4:22343791-22343810 Msa1145520:CDS 40.0%
ATGAAGAGGAAATTGTCCCT+TGG - chr7_4:22343816-22343835 Msa1145520:exon 40.0%
TCCAATCAATGCGATTCCAA+GGG + chr7_4:22343835-22343854 None:intergenic 40.0%
TTCCAATCAATGCGATTCCA+AGG + chr7_4:22343836-22343855 None:intergenic 40.0%
TTGAGCAGAACTGGAATAGT+TGG - chr7_4:22343903-22343922 Msa1145520:five_prime_UTR 40.0%
CCCTTCCCTCTCTTGTTAAT+TGG - chr7_4:22336109-22336128 Msa1145520:intron 45.0%
GCCAATTAACAAGAGAGGGA+AGG + chr7_4:22336113-22336132 None:intergenic 45.0%
!! GGTTTTGTAGCTCCAGCAAA+TGG - chr7_4:22336177-22336196 Msa1145520:CDS 45.0%
TCATCAGTGTACTCTCGAGT+GGG + chr7_4:22336358-22336377 None:intergenic 45.0%
CCTTTACTATTGCCTGGAAC+TGG + chr7_4:22336381-22336400 None:intergenic 45.0%
CCAGTTCCAGGCAATAGTAA+AGG - chr7_4:22336378-22336397 Msa1145520:intron 45.0%
ACAAGCTCGACAAGAGAAGA+TGG + chr7_4:22336688-22336707 None:intergenic 45.0%
AGAAGTCAAAAACACTGCCC+TGG + chr7_4:22336922-22336941 None:intergenic 45.0%
TTGTCATGTTGGAGTCCTAG+TGG - chr7_4:22337376-22337395 Msa1145520:intron 45.0%
! TCCAACAGCTACAGCTGTTT+TGG + chr7_4:22337768-22337787 None:intergenic 45.0%
GTATTACTCTGTCAACGACG+AGG - chr7_4:22337817-22337836 Msa1145520:intron 45.0%
! CATTTGAGGTTGCCTAACTC+AGG - chr7_4:22337918-22337937 Msa1145520:intron 45.0%
TGCCTAACTCAGGATCTTGA+AGG - chr7_4:22337928-22337947 Msa1145520:intron 45.0%
TAAAAGCAAGGGACCTGTTG+CGG + chr7_4:22338066-22338085 None:intergenic 45.0%
CAGGCTCCAAATAGGAGATA+AGG + chr7_4:22338293-22338312 None:intergenic 45.0%
GACATATGCAGGCTCCAAAT+AGG + chr7_4:22338301-22338320 None:intergenic 45.0%
AAGGTTCTTCCAAGGGAGTA+TGG - chr7_4:22338666-22338685 Msa1145520:intron 45.0%
! AGTATGGACTGCGATATCCA+TGG - chr7_4:22338682-22338701 Msa1145520:intron 45.0%
!! GCAAGAGTTCTGAGTCAGAA+GGG - chr7_4:22338769-22338788 Msa1145520:intron 45.0%
! TGAGTCAGAAGGGACTCTTT+TGG - chr7_4:22338779-22338798 Msa1145520:intron 45.0%
! GAGTCAGAAGGGACTCTTTT+GGG - chr7_4:22338780-22338799 Msa1145520:intron 45.0%
! AGTCAGAAGGGACTCTTTTG+GGG - chr7_4:22338781-22338800 Msa1145520:intron 45.0%
! GGAAGTGTGTAGTTGTAACG+GGG - chr7_4:22339215-22339234 Msa1145520:intron 45.0%
ATCAACCTTCACATGGTGTG+TGG - chr7_4:22339343-22339362 Msa1145520:intron 45.0%
! AGTGGTAACTTGATAGCAGG+TGG + chr7_4:22339586-22339605 None:intergenic 45.0%
TTACCACTATCGAGCCAATC+TGG - chr7_4:22339598-22339617 Msa1145520:intron 45.0%
CAGTAGCATGAGATGCTTGA+CGG + chr7_4:22339815-22339834 None:intergenic 45.0%
GCAGTTCTATGACAGTGACT+TGG + chr7_4:22339855-22339874 None:intergenic 45.0%
TTCACTTTGGTACGTGGTAC+GGG - chr7_4:22339909-22339928 Msa1145520:intron 45.0%
TGACTACTCTGTAAGAGGCT+GGG + chr7_4:22340304-22340323 None:intergenic 45.0%
GGAACAAAGACGGTCCATAT+CGG - chr7_4:22340411-22340430 Msa1145520:intron 45.0%
GTATCGCATTTAGGTGTGAG+TGG - chr7_4:22340546-22340565 Msa1145520:intron 45.0%
ATCGCATTTAGGTGTGAGTG+GGG - chr7_4:22340548-22340567 Msa1145520:intron 45.0%
ACTGCTCATTCCTCTTTCTC+TGG - chr7_4:22340592-22340611 Msa1145520:intron 45.0%
! ATTCCTCTTTCTCTGGTTCG+TGG - chr7_4:22340599-22340618 Msa1145520:intron 45.0%
AATCCACGAACCAGAGAAAG+AGG + chr7_4:22340605-22340624 None:intergenic 45.0%
! TCTCTGGTTCGTGGATTTAG+TGG - chr7_4:22340608-22340627 Msa1145520:intron 45.0%
! CTCTGGTTCGTGGATTTAGT+GGG - chr7_4:22340609-22340628 Msa1145520:intron 45.0%
! AATGGCTTACCGAAGTTGGT+TGG + chr7_4:22340823-22340842 None:intergenic 45.0%
AACCAACTTCGGTAAGCCAT+TGG - chr7_4:22340822-22340841 Msa1145520:intron 45.0%
ACCAACTTCGGTAAGCCATT+GGG - chr7_4:22340823-22340842 Msa1145520:intron 45.0%
! TTACGGACTAAAACCGGAGA+TGG - chr7_4:22340929-22340948 Msa1145520:intron 45.0%
! TACGGACTAAAACCGGAGAT+GGG - chr7_4:22340930-22340949 Msa1145520:intron 45.0%
GTCTTCTTCCTCCTACTTCT+GGG - chr7_4:22341173-22341192 Msa1145520:CDS 45.0%
TCTTCTTCCTCCTACTTCTG+GGG - chr7_4:22341174-22341193 Msa1145520:CDS 45.0%
! ATCAAAGCATCCCCAGAAGT+AGG + chr7_4:22341187-22341206 None:intergenic 45.0%
TAGGGGTTAATTACATGGGG+AGG + chr7_4:22341594-22341613 None:intergenic 45.0%
GTTGGTTACACGTGGTGTAT+GGG - chr7_4:22341653-22341672 Msa1145520:intron 45.0%
TACACGTGGTGTATGGGATA+TGG - chr7_4:22341659-22341678 Msa1145520:intron 45.0%
TGAATGACACAAGAGCAAGC+AGG + chr7_4:22341925-22341944 None:intergenic 45.0%
! GGATGAGATACGGAAGGTTT+TGG - chr7_4:22341968-22341987 Msa1145520:intron 45.0%
!!! CAATCGTTGCCGTTTTCTCT+TGG - chr7_4:22342120-22342139 Msa1145520:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr7_4:22342772-22342791 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr7_4:22342769-22342788 Msa1145520:intron 45.0%
GGACTAAATCCACTGAGTGT+TGG + chr7_4:22342921-22342940 None:intergenic 45.0%
! CAGTGGATTTAGTCCCACAT+CGG - chr7_4:22342926-22342945 Msa1145520:intron 45.0%
TAGTCCCACATCGGATAGAT+AGG - chr7_4:22342708-22342727 Msa1145520:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr7_4:22342772-22342791 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr7_4:22342769-22342788 Msa1145520:intron 45.0%
GTTGTGAGATCTCTTTCTGG+GGG - chr7_4:22343792-22343811 Msa1145520:CDS 45.0%
! TCCCTTGGAATCGCATTGAT+TGG - chr7_4:22343831-22343850 Msa1145520:five_prime_UTR 45.0%
!!! TTAAAATTTATTTTTCAAAT+TGG - chr7_4:22338491-22338510 Msa1145520:intron 5.0%
!! ATTCAAATTAAAATAATAAA+AGG - chr7_4:22340163-22340182 Msa1145520:intron 5.0%
!!! AAAATTTTTAAAATGAAAAA+AGG + chr7_4:22343691-22343710 None:intergenic 5.0%
GTAGGGTTAAACTGGGTCCA+TGG + chr7_4:22336313-22336332 None:intergenic 50.0%
GTGTACTCTCGAGTGGGAAA+TGG + chr7_4:22336352-22336371 None:intergenic 50.0%
GTCATCAGTGTACTCTCGAG+TGG + chr7_4:22336359-22336378 None:intergenic 50.0%
GTACACTGATGACCAGTTCC+AGG - chr7_4:22336366-22336385 Msa1145520:intron 50.0%
CCTGTAGCAGATGGAATAGC+AGG + chr7_4:22336834-22336853 None:intergenic 50.0%
CCTGCTATTCCATCTGCTAC+AGG - chr7_4:22336831-22336850 Msa1145520:intron 50.0%
GGTCATTACAGCTTGCACCA+TGG - chr7_4:22337634-22337653 Msa1145520:intron 50.0%
GCCAAAACAGCTGTAGCTGT+TGG - chr7_4:22337764-22337783 Msa1145520:intron 50.0%
CGCTTCTCTGCTTTCACCTA+CGG - chr7_4:22337955-22337974 Msa1145520:intron 50.0%
TTCACCTACGGCATTTGCTC+TGG - chr7_4:22337967-22337986 Msa1145520:intron 50.0%
TCACCTACGGCATTTGCTCT+GGG - chr7_4:22337968-22337987 Msa1145520:intron 50.0%
ATTACGAGCGCGCTCATGTT+GGG - chr7_4:22338008-22338027 Msa1145520:intron 50.0%
TATCGCAGTCCATACTCCCT+TGG + chr7_4:22338678-22338697 None:intergenic 50.0%
!! GGCAAGAGTTCTGAGTCAGA+AGG - chr7_4:22338768-22338787 Msa1145520:intron 50.0%
! AACAACAGGAGCTTGATGGC+AGG - chr7_4:22338850-22338869 Msa1145520:CDS 50.0%
!! TGACCAGATTGGCTCGATAG+TGG + chr7_4:22339604-22339623 None:intergenic 50.0%
! CATCTAGAGCGTGACCAGAT+TGG + chr7_4:22339615-22339634 None:intergenic 50.0%
ACGAACCAGGTGACTTTGGT+CGG + chr7_4:22339887-22339906 None:intergenic 50.0%
TTTGGTACGTGGTACGGGTT+TGG - chr7_4:22339914-22339933 Msa1145520:intron 50.0%
TTGGTACGTGGTACGGGTTT+GGG - chr7_4:22339915-22339934 Msa1145520:intron 50.0%
GTGACTACTCTGTAAGAGGC+TGG + chr7_4:22340305-22340324 None:intergenic 50.0%
TGGGGTATACCCCATCCAAA+CGG - chr7_4:22340566-22340585 Msa1145520:intron 50.0%
AGCAGTTTCCCGTTTGGATG+GGG + chr7_4:22340578-22340597 None:intergenic 50.0%
GAGCAGTTTCCCGTTTGGAT+GGG + chr7_4:22340579-22340598 None:intergenic 50.0%
TGAGCAGTTTCCCGTTTGGA+TGG + chr7_4:22340580-22340599 None:intergenic 50.0%
GGAATGAGCAGTTTCCCGTT+TGG + chr7_4:22340584-22340603 None:intergenic 50.0%
ATGAACCGGTACGTGCGAAT+TGG - chr7_4:22340669-22340688 Msa1145520:intron 50.0%
GCGATGACTGCACTCTACAA+TGG - chr7_4:22340742-22340761 Msa1145520:intron 50.0%
TCTCGGAAAGGGATACCTAC+GGG + chr7_4:22340795-22340814 None:intergenic 50.0%
GTCTCGGAAAGGGATACCTA+CGG + chr7_4:22340796-22340815 None:intergenic 50.0%
CCAACTTCGGTAAGCCATTG+GGG - chr7_4:22340824-22340843 Msa1145520:intron 50.0%
! ACGGACTAAAACCGGAGATG+GGG - chr7_4:22340931-22340950 Msa1145520:intron 50.0%
GGTCTTCTTCCTCCTACTTC+TGG - chr7_4:22341172-22341191 Msa1145520:CDS 50.0%
! AAAGCATCCCCAGAAGTAGG+AGG + chr7_4:22341184-22341203 None:intergenic 50.0%
ACATGGGGAGGTAGAGGATA+GGG + chr7_4:22341582-22341601 None:intergenic 50.0%
TACATGGGGAGGTAGAGGAT+AGG + chr7_4:22341583-22341602 None:intergenic 50.0%
! GGTTGGTTACACGTGGTGTA+TGG - chr7_4:22341652-22341671 Msa1145520:intron 50.0%
GCATCTACTCGAGCTCACAA+GGG + chr7_4:22341700-22341719 None:intergenic 50.0%
TGCATCTACTCGAGCTCACA+AGG + chr7_4:22341701-22341720 None:intergenic 50.0%
GAGCAAGCAGGTATGGAACA+AGG + chr7_4:22341913-22341932 None:intergenic 50.0%
GACACAAGAGCAAGCAGGTA+TGG + chr7_4:22341920-22341939 None:intergenic 50.0%
TTGTGGATCTCGGAAACTCG+CGG - chr7_4:22342433-22342452 Msa1145520:intron 50.0%
GGACTAAATCCACCGAGTGT+TGG + chr7_4:22342694-22342713 None:intergenic 50.0%
! CGGTGGATTTAGTCCCACAT+CGG - chr7_4:22342699-22342718 Msa1145520:intron 50.0%
TGTTAGCAGCCAACACTCAG+TGG - chr7_4:22342909-22342928 Msa1145520:intron 50.0%
GTACTCCTCACCTTACAAGC+CGG - chr7_4:22342986-22343005 Msa1145520:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr7_4:22342994-22343013 None:intergenic 50.0%
TCTCTCACCTGCAGAGTCAA+CGG + chr7_4:22343168-22343187 None:intergenic 50.0%
!! GGGTGTTGAGGAAGACACAT+TGG - chr7_4:22343215-22343234 Msa1145520:CDS 50.0%
AAAGGTAAAGGGAGAGTGGG+AGG + chr7_4:22343673-22343692 None:intergenic 50.0%
GAACCCAGAGCAAATGCCGT+AGG + chr7_4:22337974-22337993 None:intergenic 55.0%
GATTACGAGCGCGCTCATGT+TGG - chr7_4:22338007-22338026 Msa1145520:intron 55.0%
TCCGCTGGAGCAACATATGG+CGG - chr7_4:22338032-22338051 Msa1145520:intron 55.0%
!! TGGTGCCACACACCATGTGA+AGG + chr7_4:22339351-22339370 None:intergenic 55.0%
GCAGGTGGTCCAACGAATCT+TGG + chr7_4:22339571-22339590 None:intergenic 55.0%
! ACGCTCTAGATGTCCAGTCC+TGG - chr7_4:22339623-22339642 Msa1145520:intron 55.0%
CTCTTAACACAACCCTGCCC+AGG + chr7_4:22339651-22339670 None:intergenic 55.0%
GTGGTACGGGTTTGGGTATG+CGG - chr7_4:22339922-22339941 Msa1145520:intron 55.0%
GGGGTATACCCCATCCAAAC+GGG - chr7_4:22340567-22340586 Msa1145520:intron 55.0%
GCGTACCAATTCGCACGTAC+CGG + chr7_4:22340677-22340696 None:intergenic 55.0%
AGAGTGCAGTCATCGCGCAT+CGG + chr7_4:22340738-22340757 None:intergenic 55.0%
ACGGGAGTGGATGACCAGAA+AGG + chr7_4:22340777-22340796 None:intergenic 55.0%
TTCTGGTCATCCACTCCCGT+AGG - chr7_4:22340777-22340796 Msa1145520:intron 55.0%
GAAAGGGATACCTACGGGAG+TGG + chr7_4:22340790-22340809 None:intergenic 55.0%
! GAAGTTGGTTGGCGGTGTCT+CGG + chr7_4:22340812-22340831 None:intergenic 55.0%
GAGACACCGCCAACCAACTT+CGG - chr7_4:22340811-22340830 Msa1145520:intron 55.0%
! GGCTTACCGAAGTTGGTTGG+CGG + chr7_4:22340820-22340839 None:intergenic 55.0%
CCCCAATGGCTTACCGAAGT+TGG + chr7_4:22340827-22340846 None:intergenic 55.0%
ATCGATGTCTGGCTGCACAG+TGG + chr7_4:22341859-22341878 None:intergenic 55.0%
! CAGGAAGGCGTATCGATGTC+TGG + chr7_4:22341870-22341889 None:intergenic 55.0%
TGTTAGCAGCCAACACTCGG+TGG - chr7_4:22342682-22342701 Msa1145520:intron 55.0%
GAACTCCTCGCCTTACAAGC+CGG - chr7_4:22342759-22342778 Msa1145520:intron 55.0%
!! CAAAACCGGCTTGTAAGGCG+AGG + chr7_4:22342767-22342786 None:intergenic 55.0%
!! GGTTCTTCCGTTGACTCTGC+AGG - chr7_4:22343158-22343177 Msa1145520:intron 55.0%
ATTGCTTGAACAGGTGGGCC+TGG - chr7_4:22343752-22343771 Msa1145520:CDS 55.0%
! CTCTTTCTGGGGGCATGAAG+AGG - chr7_4:22343802-22343821 Msa1145520:CDS 55.0%
GGCTCCGCTGGAGCAACATA+TGG - chr7_4:22338029-22338048 Msa1145520:intron 60.0%
CCCGCCATATGTTGCTCCAG+CGG + chr7_4:22338036-22338055 None:intergenic 60.0%
CCGCTGGAGCAACATATGGC+GGG - chr7_4:22338033-22338052 Msa1145520:intron 60.0%
!!! GAAGGGACTCTTTTGGGGCG+AGG - chr7_4:22338786-22338805 Msa1145520:intron 60.0%
AGATGTCCAGTCCTGGCTCC+TGG - chr7_4:22339630-22339649 Msa1145520:intron 60.0%
GATGTCCAGTCCTGGCTCCT+GGG - chr7_4:22339631-22339650 Msa1145520:intron 60.0%
GGTGACTTTGGTCGGCACTC+AGG + chr7_4:22339879-22339898 None:intergenic 60.0%
!! GAGTGCCGACCAAAGTCACC+TGG - chr7_4:22339879-22339898 Msa1145520:intron 60.0%
GGTTGGCGGTGTCTCGGAAA+GGG + chr7_4:22340806-22340825 None:intergenic 60.0%
TGGTTGGCGGTGTCTCGGAA+AGG + chr7_4:22340807-22340826 None:intergenic 60.0%
TCCTGCATCGTCCACGCTTC+AGG - chr7_4:22342854-22342873 Msa1145520:intron 60.0%
GTCCACGCTTCAGGCCCATT+GGG - chr7_4:22342863-22342882 Msa1145520:intron 60.0%
GTAAAGGGAGAGTGGGAGGC+AGG + chr7_4:22343669-22343688 None:intergenic 60.0%
GGCGGGTGAGTTTCCGCAAC+AGG - chr7_4:22338050-22338069 Msa1145520:intron 65.0%
GCCTGAAGCGTGGACGATGC+AGG + chr7_4:22342858-22342877 None:intergenic 65.0%
CGTCCACGCTTCAGGCCCAT+TGG - chr7_4:22342862-22342881 Msa1145520:intron 65.0%
ACGCTTCAGGCCCATTGGGC+CGG - chr7_4:22342867-22342886 Msa1145520:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG + chr7_4:22342880-22342899 None:intergenic 65.0%
GCGCTCATGTTGGGCTCCGC+TGG - chr7_4:22338017-22338036 Msa1145520:intron 70.0%
TCCAGTCCTGGCTCCTGGGC+AGG - chr7_4:22339635-22339654 Msa1145520:intron 70.0%
CCAGTCCTGGCTCCTGGGCA+GGG - chr7_4:22339636-22339655 Msa1145520:intron 70.0%
CACAACCCTGCCCAGGAGCC+AGG + chr7_4:22339644-22339663 None:intergenic 70.0%
GGCCCAATGGGCCTGAAGCG+TGG + chr7_4:22342868-22342887 None:intergenic 70.0%
CGCTTCAGGCCCATTGGGCC+GGG - chr7_4:22342868-22342887 Msa1145520:intron 70.0%
CACGCTTCAGCCCGGCCCAA+TGG + chr7_4:22342881-22342900 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG - chr7_4:22342881-22342900 Msa1145520:intron 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG - chr7_4:22342882-22342901 Msa1145520:intron 70.0%
CACCCCCTCACGCTTCAGCC+CGG + chr7_4:22342889-22342908 None:intergenic 70.0%
CCCTGCCCAGGAGCCAGGAC+TGG + chr7_4:22339639-22339658 None:intergenic 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG - chr7_4:22342883-22342902 Msa1145520:intron 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG - chr7_4:22342884-22342903 Msa1145520:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 22336074 22343952 22336074 ID=Msa1145520;Name=Msa1145520
chr7_4 mRNA 22336074 22343952 22336074 ID=Msa1145520-mRNA-1;Parent=Msa1145520;Name=Msa1145520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=122|0.8|0.72|0.81|0.8|0.90|11|0|456
chr7_4 exon 22336074 22336115 22336074 ID=Msa1145520-mRNA-1:exon:5545;Parent=Msa1145520-mRNA-1
chr7_4 exon 22336163 22336261 22336163 ID=Msa1145520-mRNA-1:exon:5544;Parent=Msa1145520-mRNA-1
chr7_4 exon 22338792 22338898 22338792 ID=Msa1145520-mRNA-1:exon:5543;Parent=Msa1145520-mRNA-1
chr7_4 exon 22340955 22341067 22340955 ID=Msa1145520-mRNA-1:exon:5542;Parent=Msa1145520-mRNA-1
chr7_4 exon 22341155 22341357 22341155 ID=Msa1145520-mRNA-1:exon:5541;Parent=Msa1145520-mRNA-1
chr7_4 exon 22341814 22341903 22341814 ID=Msa1145520-mRNA-1:exon:5540;Parent=Msa1145520-mRNA-1
chr7_4 exon 22341972 22342086 22341972 ID=Msa1145520-mRNA-1:exon:5539;Parent=Msa1145520-mRNA-1
chr7_4 exon 22342177 22342409 22342177 ID=Msa1145520-mRNA-1:exon:5538;Parent=Msa1145520-mRNA-1
chr7_4 exon 22343202 22343288 22343202 ID=Msa1145520-mRNA-1:exon:5537;Parent=Msa1145520-mRNA-1
chr7_4 exon 22343464 22343524 22343464 ID=Msa1145520-mRNA-1:exon:5536;Parent=Msa1145520-mRNA-1
chr7_4 exon 22343610 22343952 22343610 ID=Msa1145520-mRNA-1:exon:5535;Parent=Msa1145520-mRNA-1
chr7_4 five_prime_UTR 22343831 22343952 22343831 ID=Msa1145520-mRNA-1:five_prime_utr;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22343610 22343830 22343610 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22343464 22343524 22343464 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22343202 22343288 22343202 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22342177 22342409 22342177 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22341972 22342086 22341972 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22341814 22341903 22341814 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22341155 22341357 22341155 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22340955 22341067 22340955 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22338792 22338898 22338792 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22336163 22336261 22336163 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
chr7_4 CDS 22336074 22336115 22336074 ID=Msa1145520-mRNA-1:cds;Parent=Msa1145520-mRNA-1
Gene Sequence

>Msa1145520

ATGGTTGATTCGTTCATAATAATAATTGCTCAACAACCTGAATTAAACTTGAGTGCCGAAACTGTAAATCTTCCTCTTCTAGGATTTCATGACACTGATTTCTCGCGAAAAGTTCCATGGACCCAGTTTAACCCTACTAACATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGACCAGTTCCAGGCAATAGTAAAGGAAGTCATGGGAATACTGTATTTATTGGGGTTTCTCTATCCAGTTTCTCGCCTGATAAGTTATTCTGTGTTTGAGAAGGAACAAAAGATCAAAGAAGGACTCTATATGATGGGCTTAAATGACGGCATATTTCATCTCTCTTGGTTTGTCACATATGCTTTGCAGTTTGCAGTTTCTTCTGCGGTCATTACAGCTTGCACCATGGATAATATATTCAAGTATAGTGATAAGACACTGGTGTTTGCCTACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACGTTTTTCAAAAGGGCCAAAACAGCTGTAGCTGTTGGAACTCTGTCATTTCTTGGTACCTTTTTGCCGTATTACTCTGTCAACGACGAGGGAGTCTCTATGATCTTGAAGGTTCTCGCTTCTCTGCTTTCACCTACGGCATTTGCTCTGGGTTCTATCAACTTTGCTGATTACGAGCGCGCTCATGTTGGGCTCCGCTGGAGCAACATATGGCGGGAGTCTTCTGGAGTGAACTTTTCTGCATGTCTTCTGATGATGATACTTGATACACTGCTCTATTGTGCAATTGGACTGTATTTCGATAAGGTTCTTCCAAGGGAGTATGGACTGCGATATCCATGGAACTTTATTTTTAAAAAGGATTTCTGGAGAAAGAGATCCTCCAGTTCTAAAGTTAAATTTACTGGCAAGAGTTCTGAGTCAGAAGGGACTCTTTTGGGGCGAGGTATTTTCAATCCTGCTCTAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAGGTGTATGCTACTAAAAAAGGAGATTGCTGTGCTGTTAACTCATTACAGCTGACATTATATGAAAATCAGATTCTTGCTCTTTTAGGACATAATGGAGCTGGGAAAAGCACGACGATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGATTTTTGGAAAGAACATTGTCTCTGATATTGTGGGCCTGGCTGATAAAATCAACACTGTTGTGAGATCTCTTTCTGGGGGCATGAAGAGGAAATTGTCCCTTGGAATCGCATTGATTGGAAATAGTAAGAACTGGAATAGTTGGACTTATTTGGCAGGTTATAATTCTTGA

Protein sequence

>Msa1145520

MVDSFIIIIAQQPELNLSAETVNLPLLGFHDTDFSRKVPWTQFNPTNIRIAPFPTREYTDDQFQAIVKEVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLNDGIFHLSWFVTYALQFAVSSAVITACTMDNIFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGTFLPYYSVNDEGVSMILKVLASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFSACLLMMILDTLLYCAIGLYFDKVLPREYGLRYPWNFIFKKDFWRKRSSSSKVKFTGKSSESEGTLLGRGIFNPALEAISLDMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIVGLADKINTVVRSLSGGMKRKLSLGIALIGNSKNWNSWTYLAGYNS*