Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377960 | XP_013447209.1 | 100.000 | 224 | 0 | 0 | 1 | 224 | 1 | 224 | 1.34e-156 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377960 | sp|Q39821|SDLCA_SOYBN | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 2.96e-151 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377960 | A0A072TVN2 | 100.000 | 224 | 0 | 0 | 1 | 224 | 1 | 224 | 6.40e-157 | 457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035320 | Msa1377960 | 0.862076 | 6.547766e-64 | -8.615850e-47 |
| Msa0047000 | Msa1377960 | 0.816673 | 4.897600e-52 | -8.615850e-47 |
| Msa0064020 | Msa1377960 | 0.814260 | 1.686415e-51 | -8.615850e-47 |
| Msa0693880 | Msa1377960 | 0.829924 | 3.920091e-55 | -8.615850e-47 |
| Msa0754560 | Msa1377960 | 0.833312 | 5.732593e-56 | -8.615850e-47 |
| Msa0763840 | Msa1377960 | 0.840981 | 6.266374e-58 | -8.615850e-47 |
| Msa0827500 | Msa1377960 | 0.811539 | 6.657180e-51 | -8.615850e-47 |
| Msa0378410 | Msa1377960 | 0.807720 | 4.403812e-50 | -8.615850e-47 |
| Msa0382690 | Msa1377960 | 0.815070 | 1.115920e-51 | -8.615850e-47 |
| Msa0427950 | Msa1377960 | 0.811854 | 5.685908e-51 | -8.615850e-47 |
| Msa0428210 | Msa1377960 | 0.817060 | 4.010576e-52 | -8.615850e-47 |
| Msa0463530 | Msa1377960 | 0.801870 | 7.342777e-49 | -8.615850e-47 |
| Msa1010440 | Msa1377960 | 0.802139 | 6.463417e-49 | -8.615850e-47 |
| Msa1084910 | Msa1377960 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
| Msa1111060 | Msa1377960 | 0.823006 | 1.747182e-53 | -8.615850e-47 |
| Msa1123580 | Msa1377960 | 0.819702 | 1.010930e-52 | -8.615850e-47 |
| Msa1134180 | Msa1377960 | 0.800958 | 1.128888e-48 | -8.615850e-47 |
| Msa1140410 | Msa1377960 | 0.801929 | 7.140042e-49 | -8.615850e-47 |
| Msa1145520 | Msa1377960 | 0.841469 | 4.664269e-58 | -8.615850e-47 |
| Msa1145570 | Msa1377960 | 0.801745 | 7.788152e-49 | -8.615850e-47 |
| Msa0524350 | Msa1377960 | 0.809153 | 2.177842e-50 | -8.615850e-47 |
| Msa0538740 | Msa1377960 | 0.826895 | 2.110129e-54 | -8.615850e-47 |
| Msa0565400 | Msa1377960 | 0.821662 | 3.583698e-53 | -8.615850e-47 |
| Msa0866040 | Msa1377960 | 0.826633 | 2.437042e-54 | -8.615850e-47 |
| Msa0866130 | Msa1377960 | 0.820791 | 5.692126e-53 | -8.615850e-47 |
| Msa0927140 | Msa1377960 | 0.803864 | 2.844685e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377960 | MtrunA17_Chr8g0388271 | 100.000 | 224 | 0 | 0 | 1 | 224 | 1 | 224 | 1.23e-160 | 457 |
| Msa1377960 | MtrunA17_Chr5g0396561 | 91.556 | 225 | 18 | 1 | 1 | 224 | 1 | 225 | 4.65e-147 | 422 |
| Msa1377960 | MtrunA17_Chr8g0346971 | 86.266 | 233 | 22 | 2 | 1 | 224 | 1 | 232 | 2.49e-140 | 406 |
| Msa1377960 | MtrunA17_Chr8g0391891 | 82.143 | 224 | 37 | 2 | 1 | 224 | 4 | 224 | 1.75e-129 | 378 |
| Msa1377960 | MtrunA17_Chr4g0055051 | 77.232 | 224 | 51 | 0 | 1 | 224 | 1 | 224 | 2.31e-127 | 372 |
| Msa1377960 | MtrunA17_Chr8g0337041 | 78.855 | 227 | 45 | 1 | 1 | 224 | 4 | 230 | 1.03e-126 | 372 |
| Msa1377960 | MtrunA17_Chr7g0233071 | 79.736 | 227 | 43 | 1 | 1 | 224 | 4 | 230 | 3.89e-126 | 369 |
| Msa1377960 | MtrunA17_Chr2g0279671 | 57.078 | 219 | 86 | 2 | 4 | 222 | 24 | 234 | 1.86e-77 | 248 |
| Msa1377960 | MtrunA17_Chr4g0049731 | 54.795 | 219 | 91 | 1 | 4 | 222 | 15 | 225 | 1.36e-72 | 234 |
| Msa1377960 | MtrunA17_Chr1g0161391 | 75.248 | 101 | 23 | 1 | 1 | 101 | 4 | 102 | 1.73e-52 | 166 |
| Msa1377960 | MtrunA17_Chr1g0161401 | 90.000 | 90 | 9 | 0 | 135 | 224 | 6 | 95 | 2.70e-50 | 166 |
| Msa1377960 | MtrunA17_Chr8g0379961 | 43.243 | 185 | 95 | 3 | 34 | 214 | 68 | 246 | 2.94e-34 | 129 |
| Msa1377960 | MtrunA17_Chr8g0379941 | 42.857 | 182 | 100 | 3 | 34 | 214 | 71 | 249 | 2.13e-32 | 123 |
| Msa1377960 | MtrunA17_Chr8g0360401 | 31.754 | 211 | 129 | 3 | 9 | 214 | 31 | 231 | 2.92e-20 | 89.0 |
| Msa1377960 | MtrunA17_Chr4g0013611 | 30.631 | 222 | 129 | 7 | 1 | 214 | 4 | 208 | 1.84e-17 | 80.9 |
| Msa1377960 | MtrunA17_Chr4g0076951 | 30.899 | 178 | 107 | 6 | 40 | 214 | 41 | 205 | 2.57e-17 | 80.5 |
| Msa1377960 | MtrunA17_Chr4g0050661 | 27.723 | 202 | 135 | 5 | 21 | 214 | 28 | 226 | 7.18e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377960 | AT5G42080.2 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 1.32e-151 | 428 |
| Msa1377960 | AT5G42080.4 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 1.24e-149 | 429 |
| Msa1377960 | AT5G42080.1 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 1.24e-149 | 429 |
| Msa1377960 | AT5G42080.3 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 1.28e-149 | 429 |
| Msa1377960 | AT3G61760.3 | 88.444 | 225 | 24 | 2 | 1 | 224 | 1 | 224 | 5.23e-143 | 407 |
| Msa1377960 | AT3G61760.2 | 88.444 | 225 | 24 | 2 | 1 | 224 | 1 | 224 | 1.14e-141 | 408 |
| Msa1377960 | AT3G61760.1 | 88.444 | 225 | 24 | 2 | 1 | 224 | 1 | 224 | 2.77e-141 | 408 |
| Msa1377960 | AT1G14830.1 | 82.143 | 224 | 38 | 1 | 1 | 224 | 4 | 225 | 2.79e-132 | 385 |
| Msa1377960 | AT3G60190.1 | 79.295 | 227 | 44 | 1 | 1 | 224 | 4 | 230 | 1.00e-130 | 382 |
| Msa1377960 | AT2G44590.3 | 76.889 | 225 | 51 | 1 | 1 | 224 | 1 | 225 | 9.55e-127 | 371 |
| Msa1377960 | AT2G44590.2 | 69.333 | 225 | 51 | 2 | 1 | 224 | 1 | 208 | 2.07e-110 | 329 |
| Msa1377960 | AT2G44590.1 | 69.333 | 225 | 51 | 2 | 1 | 224 | 1 | 208 | 2.29e-110 | 329 |
| Msa1377960 | AT2G14120.4 | 51.770 | 226 | 95 | 4 | 3 | 222 | 20 | 237 | 1.50e-69 | 226 |
| Msa1377960 | AT2G14120.1 | 51.770 | 226 | 95 | 4 | 3 | 222 | 20 | 237 | 3.95e-69 | 226 |
| Msa1377960 | AT2G14120.2 | 51.770 | 226 | 95 | 4 | 3 | 222 | 20 | 237 | 3.99e-69 | 226 |
| Msa1377960 | AT2G14120.3 | 51.770 | 226 | 95 | 4 | 3 | 222 | 20 | 237 | 6.51e-69 | 226 |
| Msa1377960 | AT4G33650.2 | 51.556 | 225 | 96 | 2 | 3 | 222 | 36 | 252 | 7.76e-69 | 225 |
| Msa1377960 | AT4G33650.1 | 51.556 | 225 | 96 | 2 | 3 | 222 | 36 | 252 | 8.24e-69 | 225 |
| Msa1377960 | AT1G60530.1 | 46.524 | 187 | 96 | 3 | 34 | 219 | 62 | 245 | 3.02e-42 | 145 |
| Msa1377960 | AT1G60500.1 | 44.920 | 187 | 99 | 3 | 34 | 219 | 65 | 248 | 1.65e-38 | 141 |
| Msa1377960 | AT1G53140.1 | 32.877 | 219 | 116 | 6 | 9 | 214 | 47 | 247 | 1.71e-20 | 89.7 |
| Msa1377960 | AT1G59610.1 | 30.455 | 220 | 131 | 8 | 1 | 214 | 4 | 207 | 1.51e-18 | 84.3 |
| Msa1377960 | AT1G10290.1 | 29.870 | 231 | 136 | 8 | 1 | 223 | 4 | 216 | 4.37e-18 | 82.8 |
| Msa1377960 | AT3G19720.3 | 27.805 | 205 | 131 | 6 | 21 | 214 | 36 | 234 | 1.44e-11 | 63.9 |
| Msa1377960 | AT3G19720.2 | 27.805 | 205 | 131 | 6 | 21 | 214 | 36 | 234 | 1.47e-11 | 63.9 |
| Msa1377960 | AT3G19720.1 | 27.805 | 205 | 131 | 6 | 21 | 214 | 36 | 234 | 1.57e-11 | 63.5 |
Find 80 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAAGATTCACCGATTT+TGG | 0.158213 | tig0020047:-2835 | Msa1377960:intron |
| GGTGAAAGCGCGTATGTTTA+TGG | 0.227565 | tig0020047:+3324 | None:intergenic |
| CTATTAGATCCGATCTAATA+TGG | 0.265207 | tig0020047:-3207 | Msa1377960:exon |
| GTCGTTGGTGGCCAGAGTTC+TGG | 0.296472 | tig0020047:-3074 | Msa1377960:CDS |
| GCAGCCGAACTGTATAATTC+TGG | 0.297099 | tig0020047:-1146 | Msa1377960:intron |
| CTAAGGCGGTGCAAGCTCTT+TGG | 0.312942 | tig0020047:+3156 | None:intergenic |
| TTTGACGAAGATTGATCTAA+TGG | 0.319005 | tig0020047:-780 | Msa1377960:CDS |
| TAGTGCACTCCCTACTCTTT+GGG | 0.348707 | tig0020047:-3117 | Msa1377960:CDS |
| CTAGTGCACTCCCTACTCTT+TGG | 0.351916 | tig0020047:-3118 | Msa1377960:CDS |
| AGGGACAGTTGAAATTTGTT+TGG | 0.356007 | tig0020047:+2486 | None:intergenic |
| GAATATATGCTAAGATGAAT+AGG | 0.359659 | tig0020047:+2466 | None:intergenic |
| TGTGCATGACATTGAGAATA+TGG | 0.365705 | tig0020047:-2025 | Msa1377960:CDS |
| TCTAATAGATGGAACGGTTC+CGG | 0.381785 | tig0020047:+3222 | None:intergenic |
| TTGACACTCATCGATCTTCC+TGG | 0.386900 | tig0020047:-2200 | Msa1377960:CDS |
| TATGGAGGAGTGTGTGGACT+TGG | 0.388353 | tig0020047:+3342 | None:intergenic |
| AAAAGAAAAGTTACCAAAAT+CGG | 0.399826 | tig0020047:+2822 | None:intergenic |
| CAAAGAGCTTGCACCGCCTT+AGG | 0.402102 | tig0020047:-3155 | Msa1377960:CDS |
| ATTAGATCGGATCTAATAGA+TGG | 0.403813 | tig0020047:+3211 | None:intergenic |
| GATTTCTTACCTCGTGGATC+AGG | 0.421686 | tig0020047:-3017 | Msa1377960:intron |
| ATCGCGCCGATAACTCTTAC+CGG | 0.437952 | tig0020047:-3241 | Msa1377960:five_prime_UTR |
| GAGAAAGAGGAAGGTGTTGA+AGG | 0.445722 | tig0020047:+3303 | None:intergenic |
| ACGGTTCCGGTAAGAGTTAT+CGG | 0.458650 | tig0020047:+3235 | None:intergenic |
| CCTGCTATCGCCGTCGTTGG+TGG | 0.458671 | tig0020047:-3086 | Msa1377960:CDS |
| TTCTGGAAAATCCTCCGTAT+TGG | 0.463410 | tig0020047:-3057 | Msa1377960:CDS |
| CAGATCGCCGGTGACGGTTA+CGG | 0.466891 | tig0020047:+3273 | None:intergenic |
| TCCGTATTGGAGAGTGTTGT+CGG | 0.471538 | tig0020047:-3044 | Msa1377960:CDS |
| AATATATGCTAAGATGAATA+GGG | 0.472521 | tig0020047:+2467 | None:intergenic |
| GAAATGAAGGTTAAAACAAC+GGG | 0.475785 | tig0020047:+3375 | None:intergenic |
| GAAGGAAATTCAAGATGAAA+CGG | 0.484800 | tig0020047:-2527 | Msa1377960:CDS |
| TATAATTCTGGCTATTTCGC+CGG | 0.485900 | tig0020047:-1134 | Msa1377960:CDS |
| TGAAATTTGTTTGGATCGAC+CGG | 0.492583 | tig0020047:+2495 | None:intergenic |
| TATTTGTAGGGATCGTTACT+CGG | 0.504045 | tig0020047:-2930 | Msa1377960:intron |
| CCACCAACGACGGCGATAGC+AGG | 0.509781 | tig0020047:+3086 | None:intergenic |
| TACCGGTAGGATCCACTTCA+CGG | 0.512959 | tig0020047:+1071 | None:intergenic |
| CTGAGTTTCTTCACCTTCCG+AGG | 0.516849 | tig0020047:-2855 | Msa1377960:CDS |
| GATGAAACGGATAGAGAAAC+CGG | 0.518246 | tig0020047:-2514 | Msa1377960:CDS |
| AATTAAAATTTCCCGTGAAG+TGG | 0.523008 | tig0020047:-1083 | Msa1377960:CDS |
| GTTGCAATATCTTGATTAGC+CGG | 0.527402 | tig0020047:+1115 | None:intergenic |
| ATGTCATGCACAATACTCTC+AGG | 0.527874 | tig0020047:+2036 | None:intergenic |
| GGAAGAGAATCCCAAAGAGT+AGG | 0.528008 | tig0020047:+3107 | None:intergenic |
| AGATTCACCGTGGTCACCTA+AGG | 0.530232 | tig0020047:+3139 | None:intergenic |
| TTGTGTAGCTGCGGTGAGGA+AGG | 0.537663 | tig0020047:-2545 | Msa1377960:intron |
| TGACACTCATCGATCTTCCT+GGG | 0.537665 | tig0020047:-2199 | Msa1377960:CDS |
| GCCGACAACACTCTCCAATA+CGG | 0.542785 | tig0020047:+3043 | None:intergenic |
| GAAGAGAATCCCAAAGAGTA+GGG | 0.542886 | tig0020047:+3108 | None:intergenic |
| CTTCCTGCTATCGCCGTCGT+TGG | 0.543291 | tig0020047:-3089 | Msa1377960:CDS |
| TTCCTCGCCGTAACCGTCAC+CGG | 0.545970 | tig0020047:-3280 | Msa1377960:five_prime_UTR |
| CAGCTTCACAAGAGTGATGA+GGG | 0.550682 | tig0020047:-2892 | Msa1377960:CDS |
| ATAGCCAGAATTATACAGTT+CGG | 0.552134 | tig0020047:+1142 | None:intergenic |
| TTACGGCGAGGAAGAGAAAG+AGG | 0.552924 | tig0020047:+3290 | None:intergenic |
| GAACATTACCTTCTCAATGT+AGG | 0.558262 | tig0020047:+1996 | None:intergenic |
| AGCGTAAGAAAATCACATAT+AGG | 0.567729 | tig0020047:-3408 | None:intergenic |
| GTAGATCAGATCGCCGGTGA+CGG | 0.569814 | tig0020047:+3267 | None:intergenic |
| CGATCTTCCTGGGCTTACGA+AGG | 0.578446 | tig0020047:-2189 | Msa1377960:CDS |
| ATCGGATCTAATAGATGGAA+CGG | 0.581010 | tig0020047:+3216 | None:intergenic |
| GGCAAAGATTTCTTACCTCG+TGG | 0.586975 | tig0020047:-3023 | Msa1377960:CDS |
| CTTAGCATATATTCTCCCAA+TGG | 0.587409 | tig0020047:-2457 | Msa1377960:intron |
| TCCCGTGAAGTGGATCCTAC+CGG | 0.593357 | tig0020047:-1073 | Msa1377960:intron |
| TTGTGAAGCTGCAAAACAAG+TGG | 0.596364 | tig0020047:+2904 | None:intergenic |
| AATCTTCGTCAAAACTCCAA+TGG | 0.598241 | tig0020047:+790 | None:intergenic |
| GCAGCTTCACAAGAGTGATG+AGG | 0.600736 | tig0020047:-2893 | Msa1377960:CDS |
| ACAGCGACCTTCGTAAGCCC+AGG | 0.603913 | tig0020047:+2182 | None:intergenic |
| ACCGGTAGGATCCACTTCAC+GGG | 0.605810 | tig0020047:+1072 | None:intergenic |
| TGAAATGAAGGTTAAAACAA+CGG | 0.608294 | tig0020047:+3374 | None:intergenic |
| AGAACTCTGGCCACCAACGA+CGG | 0.610611 | tig0020047:+3076 | None:intergenic |
| GGCGAGGAAGAGAAAGAGGA+AGG | 0.614334 | tig0020047:+3294 | None:intergenic |
| TATGTTTATGGAGGAGTGTG+TGG | 0.623748 | tig0020047:+3336 | None:intergenic |
| GGGCTTACGAAGGTCGCTGT+AGG | 0.630278 | tig0020047:-2179 | Msa1377960:intron |
| GGTTCGCTCCTACATTGAGA+AGG | 0.633877 | tig0020047:-2004 | Msa1377960:intron |
| CGCCGGTGACGGTTACGGCG+AGG | 0.639871 | tig0020047:+3278 | None:intergenic |
| TGGACTTACATCAACAGCAT+CGG | 0.640860 | tig0020047:+748 | None:intergenic |
| GAAGATTGATCTAATGGACA+AGG | 0.654022 | tig0020047:-774 | Msa1377960:CDS |
| TTCACCGTGGTCACCTAAGG+CGG | 0.656734 | tig0020047:+3142 | None:intergenic |
| TGCACCGCCTTAGGTGACCA+CGG | 0.675185 | tig0020047:-3146 | Msa1377960:CDS |
| TAATTTGTGTAGCTGCGGTG+AGG | 0.676029 | tig0020047:-2549 | Msa1377960:intron |
| GATATTGTAGATCAGATCGC+CGG | 0.686431 | tig0020047:+3261 | None:intergenic |
| GAAAGCGCGTATGTTTATGG+AGG | 0.687488 | tig0020047:+3327 | None:intergenic |
| GACAACACTCTCCAATACGG+AGG | 0.703245 | tig0020047:+3046 | None:intergenic |
| AAGATTGATCTAATGGACAA+GGG | 0.722186 | tig0020047:-773 | Msa1377960:CDS |
| GGAGTGCACTAGATTCACCG+TGG | 0.804143 | tig0020047:+3129 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTTTTTTTTATACAAT+TGG | - | tig0020047:1161-1180 | Msa1377960:intron | 10.0% |
| !!! | ATTTTTTTTTTATACAATTG+GGG | - | tig0020047:1163-1182 | Msa1377960:intron | 10.0% |
| !! | CATATTATATATAAGAATAA+GGG | + | tig0020047:1818-1837 | None:intergenic | 10.0% |
| !! | ACATATTATATATAAGAATA+AGG | + | tig0020047:1819-1838 | None:intergenic | 10.0% |
| !! | ATAAATAACTAAGAAAAATA+TGG | - | tig0020047:2255-2274 | Msa1377960:intron | 10.0% |
| !! | AAAAAAATCTATATTTGTTT+CGG | + | tig0020047:2423-2442 | None:intergenic | 10.0% |
| !!! | ATATAGAAACATTTTGAAAA+TGG | + | tig0020047:1428-1447 | None:intergenic | 15.0% |
| !!! | ATAGGAAATAAAATATTTTC+AGG | - | tig0020047:2204-2223 | Msa1377960:CDS | 15.0% |
| !! | ATAACATTTGTGTAAAAATT+AGG | - | tig0020047:2946-2965 | Msa1377960:intron | 15.0% |
| !! | AAAAGAAAAGTTACCAAAAT+CGG | + | tig0020047:1337-1356 | None:intergenic | 20.0% |
| !! | TTCAAATCAGTAAAATCAAT+GGG | + | tig0020047:1386-1405 | None:intergenic | 20.0% |
| !! | ATTCAAATCAGTAAAATCAA+TGG | + | tig0020047:1387-1406 | None:intergenic | 20.0% |
| !! | AATATATGCTAAGATGAATA+GGG | + | tig0020047:1692-1711 | None:intergenic | 20.0% |
| !! | TATATAATATGTAGATCTGT+CGG | - | tig0020047:1827-1846 | Msa1377960:intron | 20.0% |
| !!! | TTTATTCAAGTGTTGAATTA+TGG | - | tig0020047:1902-1921 | Msa1377960:intron | 20.0% |
| !!! | TTATTCAAGTGTTGAATTAT+GGG | - | tig0020047:1903-1922 | Msa1377960:intron | 20.0% |
| !!! | CTATAATTTTGTCTATTTGT+GGG | + | tig0020047:2309-2328 | None:intergenic | 20.0% |
| !!! | TCTATAATTTTGTCTATTTG+TGG | + | tig0020047:2310-2329 | None:intergenic | 20.0% |
| !!! | GATAAAAGTTATGTTTCTAT+AGG | + | tig0020047:2370-2389 | None:intergenic | 20.0% |
| !! | TAATCTATGCAATTATCATT+CGG | + | tig0020047:2462-2481 | None:intergenic | 20.0% |
| !! | TTATTTAAATATAGGGACTT+GGG | + | tig0020047:2523-2542 | None:intergenic | 20.0% |
| !! | TTTATTTAAATATAGGGACT+TGG | + | tig0020047:2524-2543 | None:intergenic | 20.0% |
| !!! | GGGGTTTTTATTTAAATATA+GGG | + | tig0020047:2530-2549 | None:intergenic | 20.0% |
| !!! | TGGGGTTTTTATTTAAATAT+AGG | + | tig0020047:2531-2550 | None:intergenic | 20.0% |
| !! | ATCATTAATTTCAAAAACTG+TGG | - | tig0020047:2911-2930 | Msa1377960:CDS | 20.0% |
| !!! | TTTCAATATTTCCTTTTCTT+TGG | - | tig0020047:3109-3128 | Msa1377960:CDS | 20.0% |
| !! | ACATTAAGTAAATAGTTTGA+TGG | - | tig0020047:3298-3317 | Msa1377960:five_prime_UTR | 20.0% |
| !!! | GTTTATTTGTTTCAACTTTT+AGG | - | tig0020047:3335-3354 | Msa1377960:five_prime_UTR | 20.0% |
| ! | TGAAATGAAGGTTAAAACAA+CGG | + | tig0020047:785-804 | None:intergenic | 25.0% |
| !!! | TGGTTTTGAAATTGAAATGA+AGG | + | tig0020047:797-816 | None:intergenic | 25.0% |
| !! | TTAGGTTTTCCATATTAGAT+CGG | + | tig0020047:961-980 | None:intergenic | 25.0% |
| !!! | TTTTGTTGACTAATGAGATT+AGG | + | tig0020047:979-998 | None:intergenic | 25.0% |
| ! | ATAATTGATGCGTATTTGTA+GGG | - | tig0020047:1214-1233 | Msa1377960:intron | 25.0% |
| ! | TCAAATCAGTAAAATCAATG+GGG | + | tig0020047:1385-1404 | None:intergenic | 25.0% |
| ! | ACATGGAAACATTTCAAAAT+CGG | + | tig0020047:1555-1574 | None:intergenic | 25.0% |
| ! | GAATATATGCTAAGATGAAT+AGG | + | tig0020047:1693-1712 | None:intergenic | 25.0% |
| ! | TATATATCAAACGTACCATT+GGG | + | tig0020047:1717-1736 | None:intergenic | 25.0% |
| ! | ATATATATCAAACGTACCAT+TGG | + | tig0020047:1718-1737 | None:intergenic | 25.0% |
| !!! | TATTTTTGCATAACTGTAGA+TGG | - | tig0020047:2093-2112 | Msa1377960:intron | 25.0% |
| !! | ATTTTTGCATAACTGTAGAT+GGG | - | tig0020047:2094-2113 | Msa1377960:intron | 25.0% |
| !! | CAAGTACTAAAGCTTTTAAT+AGG | - | tig0020047:2186-2205 | Msa1377960:CDS | 25.0% |
| !!! | ATTTTCAGGATCAACTTATA+TGG | - | tig0020047:2218-2237 | Msa1377960:intron | 25.0% |
| ! | TCTATAGGATGATTATGTAA+AGG | + | tig0020047:2355-2374 | None:intergenic | 25.0% |
| ! | GATTTAATCATAAAGATGAG+AGG | - | tig0020047:2393-2412 | Msa1377960:intron | 25.0% |
| !!! | TGAACTTGGACTTTTTTTAT+GGG | + | tig0020047:2560-2579 | None:intergenic | 25.0% |
| !!! | CTGTTTTTTCATTGCATAAA+GGG | + | tig0020047:2589-2608 | None:intergenic | 25.0% |
| !!! | TCTGTTTTTTCATTGCATAA+AGG | + | tig0020047:2590-2609 | None:intergenic | 25.0% |
| ! | TGATGTTCATACATAATACA+AGG | + | tig0020047:2895-2914 | None:intergenic | 25.0% |
| !! | AAAGGAAATATTGAAAGTAC+CGG | + | tig0020047:3105-3124 | None:intergenic | 25.0% |
| ! | TCGTTAAATGCATTCAAAAT+GGG | + | tig0020047:3147-3166 | None:intergenic | 25.0% |
| ! | TTCGTTAAATGCATTCAAAA+TGG | + | tig0020047:3148-3167 | None:intergenic | 25.0% |
| !! | GCATTTAACGAATCTTTTTA+TGG | - | tig0020047:3156-3175 | Msa1377960:CDS | 25.0% |
| ! | TAGAATAATGGTTAAATCTG+CGG | + | tig0020047:3230-3249 | None:intergenic | 25.0% |
| ! | AGTGCAAAAAGTTAGAATAA+TGG | + | tig0020047:3242-3261 | None:intergenic | 25.0% |
| !!! | TTTGATGGTTTTCTAATCAT+TGG | - | tig0020047:3313-3332 | Msa1377960:five_prime_UTR | 25.0% |
| GAAATGAAGGTTAAAACAAC+GGG | + | tig0020047:784-803 | None:intergenic | 30.0% | |
| ATTAGATCGGATCTAATAGA+TGG | + | tig0020047:948-967 | None:intergenic | 30.0% | |
| CTATTAGATCCGATCTAATA+TGG | - | tig0020047:949-968 | Msa1377960:intron | 30.0% | |
| CATAATTGATGCGTATTTGT+AGG | - | tig0020047:1213-1232 | Msa1377960:intron | 30.0% | |
| CAAATCAGTAAAATCAATGG+GGG | + | tig0020047:1384-1403 | None:intergenic | 30.0% | |
| GAAATGTTTCCATGTATGTA+TGG | - | tig0020047:1560-1579 | Msa1377960:intron | 30.0% | |
| GAAGGAAATTCAAGATGAAA+CGG | - | tig0020047:1629-1648 | Msa1377960:intron | 30.0% | |
| TGTAAGATCGTTTGAATTGT+AGG | - | tig0020047:2280-2299 | Msa1377960:intron | 30.0% | |
| GAGAAATTACTTCCAAACTT+GGG | + | tig0020047:2492-2511 | None:intergenic | 30.0% | |
| TGAGAAATTACTTCCAAACT+TGG | + | tig0020047:2493-2512 | None:intergenic | 30.0% | |
| !!! | CTGAACTTGGACTTTTTTTA+TGG | + | tig0020047:2561-2580 | None:intergenic | 30.0% |
| ! | GCAAGATAAACTTTCTAGAA+TGG | + | tig0020047:2839-2858 | None:intergenic | 30.0% |
| ATAGCCAGAATTATACAGTT+CGG | + | tig0020047:3017-3036 | None:intergenic | 30.0% | |
| !!! | ACGGGAAATTTTAATTGCAT+CGG | + | tig0020047:3069-3088 | None:intergenic | 30.0% |
| AATTAAAATTTCCCGTGAAG+TGG | - | tig0020047:3073-3092 | Msa1377960:CDS | 30.0% | |
| CGTTAAATGCATTCAAAATG+GGG | + | tig0020047:3146-3165 | None:intergenic | 30.0% | |
| !!! | CTTTTTGCACTGTTGATTTT+TGG | - | tig0020047:3251-3270 | Msa1377960:five_prime_UTR | 30.0% |
| TTTGACGAAGATTGATCTAA+TGG | - | tig0020047:3376-3395 | Msa1377960:five_prime_UTR | 30.0% | |
| ! | AAGATTGATCTAATGGACAA+GGG | - | tig0020047:3383-3402 | Msa1377960:five_prime_UTR | 30.0% |
| ATCGGATCTAATAGATGGAA+CGG | + | tig0020047:943-962 | None:intergenic | 35.0% | |
| AAAAAAATACCTGATCCACG+AGG | + | tig0020047:1151-1170 | None:intergenic | 35.0% | |
| TATTTGTAGGGATCGTTACT+CGG | - | tig0020047:1226-1245 | Msa1377960:intron | 35.0% | |
| ! | AAATCGGTGAATCTTTTCCT+CGG | + | tig0020047:1321-1340 | None:intergenic | 35.0% |
| !!! | AGGAAAAGATTCACCGATTT+TGG | - | tig0020047:1321-1340 | Msa1377960:intron | 35.0% |
| TGTTTCCATGTATGTATGGA+TGG | - | tig0020047:1564-1583 | Msa1377960:intron | 35.0% | |
| CATTACCATCCATACATACA+TGG | + | tig0020047:1572-1591 | None:intergenic | 35.0% | |
| CATGTATGTATGGATGGTAA+TGG | - | tig0020047:1570-1589 | Msa1377960:intron | 35.0% | |
| !! | TGTATGGATGGTAATGGTAA+TGG | - | tig0020047:1576-1595 | Msa1377960:intron | 35.0% |
| !! | TGGTTTAATTTGTGTAGCTG+CGG | - | tig0020047:1602-1621 | Msa1377960:intron | 35.0% |
| ! | TGAAATTTGTTTGGATCGAC+CGG | + | tig0020047:1664-1683 | None:intergenic | 35.0% |
| ! | AGGGACAGTTGAAATTTGTT+TGG | + | tig0020047:1673-1692 | None:intergenic | 35.0% |
| CTTAGCATATATTCTCCCAA+TGG | - | tig0020047:1699-1718 | Msa1377960:intron | 35.0% | |
| TGTGCATGACATTGAGAATA+TGG | - | tig0020047:2131-2150 | Msa1377960:intron | 35.0% | |
| GAACATTACCTTCTCAATGT+AGG | + | tig0020047:2163-2182 | None:intergenic | 35.0% | |
| TCTATGCAATTATCATTCGG+TGG | + | tig0020047:2459-2478 | None:intergenic | 35.0% | |
| GATTAAGAAGTTCCCAAGTT+TGG | - | tig0020047:2477-2496 | Msa1377960:CDS | 35.0% | |
| !!! | TGGACTTTTTTTATGGGACT+CGG | + | tig0020047:2554-2573 | None:intergenic | 35.0% |
| AAACAAAACCCAGGTTGTAA+AGG | - | tig0020047:2627-2646 | Msa1377960:intron | 35.0% | |
| ! | TTGTAAAGGTGTGAGTTGTT+TGG | - | tig0020047:2641-2660 | Msa1377960:intron | 35.0% |
| ! | TGTAAAGGTGTGAGTTGTTT+GGG | - | tig0020047:2642-2661 | Msa1377960:intron | 35.0% |
| TGAGTTGTTTGGGTCAAAAA+CGG | - | tig0020047:2652-2671 | Msa1377960:intron | 35.0% | |
| ATGAAAATCGTTGAAGAGAC+CGG | + | tig0020047:2752-2771 | None:intergenic | 35.0% | |
| ! | TCTTCAACGATTTTCATGGT+TGG | - | tig0020047:2755-2774 | Msa1377960:intron | 35.0% |
| TAGAATGGTTGTTAAGAGCA+CGG | + | tig0020047:2824-2843 | None:intergenic | 35.0% | |
| ! | TATAATTCTGGCTATTTCGC+CGG | - | tig0020047:3022-3041 | Msa1377960:CDS | 35.0% |
| GTTGCAATATCTTGATTAGC+CGG | + | tig0020047:3044-3063 | None:intergenic | 35.0% | |
| !! | GAAATATTGAAAGTACCGGT+AGG | + | tig0020047:3101-3120 | None:intergenic | 35.0% |
| AACGCTAAAAGCCAAAGAAA+AGG | + | tig0020047:3123-3142 | None:intergenic | 35.0% | |
| AATCTTCGTCAAAACTCCAA+TGG | + | tig0020047:3369-3388 | None:intergenic | 35.0% | |
| ! | GAAGATTGATCTAATGGACA+AGG | - | tig0020047:3382-3401 | Msa1377960:five_prime_UTR | 35.0% |
| ! | TATGTTTATGGAGGAGTGTG+TGG | + | tig0020047:823-842 | None:intergenic | 40.0% |
| GATATTGTAGATCAGATCGC+CGG | + | tig0020047:898-917 | None:intergenic | 40.0% | |
| TCTAATAGATGGAACGGTTC+CGG | + | tig0020047:937-956 | None:intergenic | 40.0% | |
| GAAGAGAATCCCAAAGAGTA+GGG | + | tig0020047:1051-1070 | None:intergenic | 40.0% | |
| ! | TTCTGGAAAATCCTCCGTAT+TGG | - | tig0020047:1099-1118 | Msa1377960:CDS | 40.0% |
| TTGTGAAGCTGCAAAACAAG+TGG | + | tig0020047:1255-1274 | None:intergenic | 40.0% | |
| !! | GATGGTAATGGTAATGGTGA+TGG | - | tig0020047:1582-1601 | Msa1377960:intron | 40.0% |
| GATGAAACGGATAGAGAAAC+CGG | - | tig0020047:1642-1661 | Msa1377960:intron | 40.0% | |
| !! | AGTACAGAAGCATCATCTTG+TGG | - | tig0020047:1862-1881 | Msa1377960:intron | 40.0% |
| ACAACTGCAAGAGTCACAAA+AGG | + | tig0020047:1932-1951 | None:intergenic | 40.0% | |
| TGACATGTCTTTCCTGTACA+CGG | - | tig0020047:2012-2031 | Msa1377960:CDS | 40.0% | |
| ! | CTTTCCTGTACACGGTTTTA+AGG | - | tig0020047:2020-2039 | Msa1377960:CDS | 40.0% |
| ! | ATAGCCTTAAAACCGTGTAC+AGG | + | tig0020047:2027-2046 | None:intergenic | 40.0% |
| ATGTCATGCACAATACTCTC+AGG | + | tig0020047:2123-2142 | None:intergenic | 40.0% | |
| ! | TGCAATTATCATTCGGTGGT+AGG | + | tig0020047:2455-2474 | None:intergenic | 40.0% |
| !!! | TTTTTTTATGGGACTCGGTG+GGG | + | tig0020047:2549-2568 | None:intergenic | 40.0% |
| !!! | CTTTTTTTATGGGACTCGGT+GGG | + | tig0020047:2550-2569 | None:intergenic | 40.0% |
| !!! | ACTTTTTTTATGGGACTCGG+TGG | + | tig0020047:2551-2570 | None:intergenic | 40.0% |
| ATAAAGGGATGCACTGAACT+TGG | + | tig0020047:2574-2593 | None:intergenic | 40.0% | |
| CGAGTCAAAAAACAAAACCC+AGG | - | tig0020047:2618-2637 | Msa1377960:intron | 40.0% | |
| AACTCACACCTTTACAACCT+GGG | + | tig0020047:2638-2657 | None:intergenic | 40.0% | |
| AGGAAAATCGTTGAATCGTG+GGG | + | tig0020047:2713-2732 | None:intergenic | 40.0% | |
| GAGGAAAATCGTTGAATCGT+GGG | + | tig0020047:2714-2733 | None:intergenic | 40.0% | |
| AGAGGAAAATCGTTGAATCG+TGG | + | tig0020047:2715-2734 | None:intergenic | 40.0% | |
| ! | GGTCTCTTCAACGATTTTCA+TGG | - | tig0020047:2751-2770 | Msa1377960:intron | 40.0% |
| ! | TCAACGATTTTCATGGTTGG+AGG | - | tig0020047:2758-2777 | Msa1377960:intron | 40.0% |
| ! | CAACGATTTTCATGGTTGGA+GGG | - | tig0020047:2759-2778 | Msa1377960:intron | 40.0% |
| CAAAAACTGTGGCAAGTTCT+TGG | - | tig0020047:2922-2941 | Msa1377960:CDS | 40.0% | |
| !! | GCATACTGCTTTTCGTACAT+GGG | + | tig0020047:2972-2991 | None:intergenic | 40.0% |
| !! | AGCATACTGCTTTTCGTACA+TGG | + | tig0020047:2973-2992 | None:intergenic | 40.0% |
| GAGAACAAGCTGACTGAATT+GGG | - | tig0020047:3273-3292 | Msa1377960:five_prime_UTR | 40.0% | |
| ! | CTTTTAGGCGAAAGAACCAT+TGG | - | tig0020047:3350-3369 | Msa1377960:five_prime_UTR | 40.0% |
| ! | GAAAGCGCGTATGTTTATGG+AGG | + | tig0020047:832-851 | None:intergenic | 45.0% |
| ! | GGTGAAAGCGCGTATGTTTA+TGG | + | tig0020047:835-854 | None:intergenic | 45.0% |
| !! | GAGAAAGAGGAAGGTGTTGA+AGG | + | tig0020047:856-875 | None:intergenic | 45.0% |
| ACGGTTCCGGTAAGAGTTAT+CGG | + | tig0020047:924-943 | None:intergenic | 45.0% | |
| TAGTGCACTCCCTACTCTTT+GGG | - | tig0020047:1039-1058 | Msa1377960:intron | 45.0% | |
| GGAAGAGAATCCCAAAGAGT+AGG | + | tig0020047:1052-1071 | None:intergenic | 45.0% | |
| !! | TCCGTATTGGAGAGTGTTGT+CGG | - | tig0020047:1112-1131 | Msa1377960:CDS | 45.0% |
| GGCAAAGATTTCTTACCTCG+TGG | - | tig0020047:1133-1152 | Msa1377960:CDS | 45.0% | |
| GATTTCTTACCTCGTGGATC+AGG | - | tig0020047:1139-1158 | Msa1377960:CDS | 45.0% | |
| CAGCTTCACAAGAGTGATGA+GGG | - | tig0020047:1264-1283 | Msa1377960:intron | 45.0% | |
| ! | TAATTTGTGTAGCTGCGGTG+AGG | - | tig0020047:1607-1626 | Msa1377960:intron | 45.0% |
| TTGACACTCATCGATCTTCC+TGG | - | tig0020047:1956-1975 | Msa1377960:intron | 45.0% | |
| TGACACTCATCGATCTTCCT+GGG | - | tig0020047:1957-1976 | Msa1377960:intron | 45.0% | |
| CAACTCACACCTTTACAACC+TGG | + | tig0020047:2639-2658 | None:intergenic | 45.0% | |
| GGTCAAAAACGGTTCACCAT+GGG | - | tig0020047:2663-2682 | Msa1377960:intron | 45.0% | |
| !! | TCTCTAGTGTTGGTTTCCCA+TGG | + | tig0020047:2682-2701 | None:intergenic | 45.0% |
| !!! | GGAAGCGTTTTCTCTAGTGT+TGG | + | tig0020047:2692-2711 | None:intergenic | 45.0% |
| GCAGCCGAACTGTATAATTC+TGG | - | tig0020047:3010-3029 | Msa1377960:intron | 45.0% | |
| GGAGAACAAGCTGACTGAAT+TGG | - | tig0020047:3272-3291 | Msa1377960:five_prime_UTR | 45.0% | |
| !!! | TATTTTTTTTTTATACAATT+GGG | - | tig0020047:1162-1181 | Msa1377960:intron | 5.0% |
| ! | TATGGAGGAGTGTGTGGACT+TGG | + | tig0020047:817-836 | None:intergenic | 50.0% |
| TTACGGCGAGGAAGAGAAAG+AGG | + | tig0020047:869-888 | None:intergenic | 50.0% | |
| ! | ATCGCGCCGATAACTCTTAC+CGG | - | tig0020047:915-934 | Msa1377960:intron | 50.0% |
| AGATTCACCGTGGTCACCTA+AGG | + | tig0020047:1020-1039 | None:intergenic | 50.0% | |
| CTAGTGCACTCCCTACTCTT+TGG | - | tig0020047:1038-1057 | Msa1377960:intron | 50.0% | |
| ! | CGGAGGATTTTCCAGAACTC+TGG | + | tig0020047:1096-1115 | None:intergenic | 50.0% |
| GACAACACTCTCCAATACGG+AGG | + | tig0020047:1113-1132 | None:intergenic | 50.0% | |
| GCCGACAACACTCTCCAATA+CGG | + | tig0020047:1116-1135 | None:intergenic | 50.0% | |
| GCAGCTTCACAAGAGTGATG+AGG | - | tig0020047:1263-1282 | Msa1377960:intron | 50.0% | |
| CTGAGTTTCTTCACCTTCCG+AGG | - | tig0020047:1301-1320 | Msa1377960:intron | 50.0% | |
| ! | CGGTGAATCTTTTCCTCGGA+AGG | + | tig0020047:1317-1336 | None:intergenic | 50.0% |
| GGTTCGCTCCTACATTGAGA+AGG | - | tig0020047:2152-2171 | Msa1377960:intron | 50.0% | |
| GGGTCAAAAACGGTTCACCA+TGG | - | tig0020047:2662-2681 | Msa1377960:intron | 50.0% | |
| AATCGTTGAAGAGACCGGAG+TGG | + | tig0020047:2747-2766 | None:intergenic | 50.0% | |
| TACCGGTAGGATCCACTTCA+CGG | + | tig0020047:3088-3107 | None:intergenic | 50.0% | |
| GGCGAGGAAGAGAAAGAGGA+AGG | + | tig0020047:865-884 | None:intergenic | 55.0% | |
| GTAGATCAGATCGCCGGTGA+CGG | + | tig0020047:892-911 | None:intergenic | 55.0% | |
| CTAAGGCGGTGCAAGCTCTT+TGG | + | tig0020047:1003-1022 | None:intergenic | 55.0% | |
| CAAAGAGCTTGCACCGCCTT+AGG | - | tig0020047:1001-1020 | Msa1377960:intron | 55.0% | |
| TTCACCGTGGTCACCTAAGG+CGG | + | tig0020047:1017-1036 | None:intergenic | 55.0% | |
| GGAGTGCACTAGATTCACCG+TGG | + | tig0020047:1030-1049 | None:intergenic | 55.0% | |
| AGAACTCTGGCCACCAACGA+CGG | + | tig0020047:1083-1102 | None:intergenic | 55.0% | |
| TTGTGTAGCTGCGGTGAGGA+AGG | - | tig0020047:1611-1630 | Msa1377960:intron | 55.0% | |
| CGATCTTCCTGGGCTTACGA+AGG | - | tig0020047:1967-1986 | Msa1377960:intron | 55.0% | |
| TCCCGTGAAGTGGATCCTAC+CGG | - | tig0020047:3083-3102 | Msa1377960:CDS | 55.0% | |
| ACCGGTAGGATCCACTTCAC+GGG | + | tig0020047:3087-3106 | None:intergenic | 55.0% | |
| TTCCTCGCCGTAACCGTCAC+CGG | - | tig0020047:876-895 | Msa1377960:intron | 60.0% | |
| ! | CAGATCGCCGGTGACGGTTA+CGG | + | tig0020047:886-905 | None:intergenic | 60.0% |
| TGCACCGCCTTAGGTGACCA+CGG | - | tig0020047:1010-1029 | Msa1377960:intron | 60.0% | |
| CTTCCTGCTATCGCCGTCGT+TGG | - | tig0020047:1067-1086 | Msa1377960:intron | 60.0% | |
| !! | GTCGTTGGTGGCCAGAGTTC+TGG | - | tig0020047:1082-1101 | Msa1377960:CDS | 60.0% |
| ACAGCGACCTTCGTAAGCCC+AGG | + | tig0020047:1977-1996 | None:intergenic | 60.0% | |
| GGGCTTACGAAGGTCGCTGT+AGG | - | tig0020047:1977-1996 | Msa1377960:intron | 60.0% | |
| CCTCTGCGTGCTTACCACTC+CGG | - | tig0020047:2730-2749 | Msa1377960:intron | 60.0% | |
| CCACCAACGACGGCGATAGC+AGG | + | tig0020047:1073-1092 | None:intergenic | 65.0% | |
| CCTGCTATCGCCGTCGTTGG+TGG | - | tig0020047:1070-1089 | Msa1377960:intron | 65.0% | |
| CCGGAGTGGTAAGCACGCAG+AGG | + | tig0020047:2733-2752 | None:intergenic | 65.0% | |
| ! | CGCCGGTGACGGTTACGGCG+AGG | + | tig0020047:881-900 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020047 | gene | 757 | 3421 | 757 | ID=Msa1377960;Name=Msa1377960 |
| tig0020047 | mRNA | 757 | 3421 | 757 | ID=Msa1377960-mRNA-1;Parent=Msa1377960;Name=Msa1377960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=211|1|0.85|1|1|1|7|0|224 |
| tig0020047 | exon | 757 | 821 | 757 | ID=Msa1377960-mRNA-1:exon:5914;Parent=Msa1377960-mRNA-1 |
| tig0020047 | exon | 1074 | 1164 | 1074 | ID=Msa1377960-mRNA-1:exon:5913;Parent=Msa1377960-mRNA-1 |
| tig0020047 | exon | 2005 | 2066 | 2005 | ID=Msa1377960-mRNA-1:exon:5912;Parent=Msa1377960-mRNA-1 |
| tig0020047 | exon | 2180 | 2230 | 2180 | ID=Msa1377960-mRNA-1:exon:5911;Parent=Msa1377960-mRNA-1 |
| tig0020047 | exon | 2458 | 2559 | 2458 | ID=Msa1377960-mRNA-1:exon:5910;Parent=Msa1377960-mRNA-1 |
| tig0020047 | exon | 2836 | 2943 | 2836 | ID=Msa1377960-mRNA-1:exon:5909;Parent=Msa1377960-mRNA-1 |
| tig0020047 | exon | 3018 | 3421 | 3018 | ID=Msa1377960-mRNA-1:exon:5908;Parent=Msa1377960-mRNA-1 |
| tig0020047 | five_prime_UTR | 3211 | 3421 | 3211 | ID=Msa1377960-mRNA-1:five_prime_utr;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 3018 | 3210 | 3018 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 2836 | 2943 | 2836 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 2458 | 2559 | 2458 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 2180 | 2230 | 2180 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 2005 | 2066 | 2005 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 1074 | 1164 | 1074 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| tig0020047 | CDS | 757 | 821 | 757 | ID=Msa1377960-mRNA-1:cds;Parent=Msa1377960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
