Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149170 | XP_003623028.1 | 81.616 | 495 | 55 | 3 | 1 | 464 | 1 | 490 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149170 | sp|Q9SD53|Y3720_ARATH | 25.951 | 447 | 250 | 17 | 44 | 461 | 61 | 455 | 3.63e-24 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149170 | G7L3E0 | 81.616 | 495 | 55 | 3 | 1 | 464 | 1 | 490 | 0.0 | 791 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0727640 | Msa1149170 | 0.807231 | 5.590762e-50 | -8.615850e-47 |
| Msa0741220 | Msa1149170 | 0.800288 | 1.546325e-48 | -8.615850e-47 |
| Msa0768990 | Msa1149170 | 0.813456 | 2.536249e-51 | -8.615850e-47 |
| Msa0823820 | Msa1149170 | 0.817423 | 3.323522e-52 | -8.615850e-47 |
| Msa0829300 | Msa1149170 | 0.815542 | 8.764427e-52 | -8.615850e-47 |
| Msa0829330 | Msa1149170 | 0.811969 | 5.367212e-51 | -8.615850e-47 |
| Msa0174450 | Msa1149170 | 0.806575 | 7.695438e-50 | -8.615850e-47 |
| Msa0378720 | Msa1149170 | 0.803767 | 2.979174e-49 | -8.615850e-47 |
| Msa0474730 | Msa1149170 | 0.807943 | 3.948294e-50 | -8.615850e-47 |
| Msa1132840 | Msa1149170 | 0.800584 | 1.345696e-48 | -8.615850e-47 |
| Msa1149170 | Msa1150820 | 0.817014 | 4.106389e-52 | -8.615850e-47 |
| Msa1149170 | Msa1236410 | 0.802580 | 5.243953e-49 | -8.615850e-47 |
| Msa0580370 | Msa1149170 | 0.802072 | 6.672589e-49 | -8.615850e-47 |
| Msa0863010 | Msa1149170 | 0.812388 | 4.347991e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149170 | MtrunA17_Chr7g0238231 | 81.616 | 495 | 55 | 3 | 1 | 464 | 1 | 490 | 0.0 | 791 |
| Msa1149170 | MtrunA17_Chr7g0238241 | 76.261 | 476 | 94 | 6 | 1 | 465 | 1 | 468 | 0.0 | 711 |
| Msa1149170 | MtrunA17_Chr7g0238111 | 69.165 | 467 | 105 | 5 | 1 | 464 | 1 | 431 | 0.0 | 635 |
| Msa1149170 | MtrunA17_Chr7g0238511 | 67.880 | 467 | 116 | 3 | 1 | 464 | 1 | 436 | 0.0 | 635 |
| Msa1149170 | MtrunA17_Chr7g0238101 | 66.871 | 489 | 129 | 8 | 1 | 465 | 1 | 480 | 0.0 | 623 |
| Msa1149170 | MtrunA17_Chr7g0238141 | 62.876 | 466 | 152 | 6 | 1 | 464 | 1 | 447 | 0.0 | 546 |
| Msa1149170 | MtrunA17_Chr7g0238131 | 64.286 | 420 | 141 | 5 | 51 | 465 | 1 | 416 | 0.0 | 526 |
| Msa1149170 | MtrunA17_Chr7g0238191 | 61.670 | 467 | 148 | 11 | 1 | 464 | 1 | 439 | 0.0 | 515 |
| Msa1149170 | MtrunA17_Chr7g0238181 | 66.921 | 393 | 91 | 4 | 72 | 464 | 1 | 354 | 1.84e-180 | 508 |
| Msa1149170 | MtrunA17_Chr7g0238171 | 51.970 | 533 | 173 | 6 | 1 | 464 | 1 | 519 | 1.16e-178 | 510 |
| Msa1149170 | MtrunA17_Chr7g0238251 | 55.490 | 510 | 159 | 8 | 1 | 463 | 1 | 489 | 8.70e-175 | 499 |
| Msa1149170 | MtrunA17_Chr7g0238151 | 71.103 | 263 | 66 | 4 | 2 | 261 | 1 | 256 | 1.41e-127 | 370 |
| Msa1149170 | MtrunA17_Chr7g0238291 | 65.918 | 267 | 76 | 4 | 1 | 262 | 1 | 257 | 1.09e-113 | 335 |
| Msa1149170 | MtrunA17_Chr7g0232531 | 65.428 | 269 | 77 | 5 | 1 | 261 | 1 | 261 | 3.09e-112 | 331 |
| Msa1149170 | MtrunA17_Chr7g0238211 | 87.363 | 182 | 23 | 0 | 282 | 463 | 1 | 182 | 2.27e-105 | 311 |
| Msa1149170 | MtrunA17_Chr7g0238091 | 75.916 | 191 | 46 | 0 | 274 | 464 | 29 | 219 | 1.03e-103 | 308 |
| Msa1149170 | MtrunA17_Chr7g0238051 | 60.219 | 274 | 68 | 3 | 232 | 464 | 92 | 365 | 3.43e-103 | 312 |
| Msa1149170 | MtrunA17_Chr8g0354591 | 39.066 | 471 | 218 | 10 | 27 | 463 | 24 | 459 | 7.58e-103 | 314 |
| Msa1149170 | MtrunA17_Chr8g0352511 | 37.747 | 506 | 234 | 12 | 4 | 463 | 2 | 472 | 1.67e-100 | 309 |
| Msa1149170 | MtrunA17_Chr7g0238071 | 77.660 | 188 | 38 | 2 | 1 | 188 | 1 | 184 | 3.24e-98 | 293 |
| Msa1149170 | MtrunA17_Chr7g0238021 | 72.727 | 198 | 47 | 2 | 72 | 262 | 1 | 198 | 1.34e-95 | 286 |
| Msa1149170 | MtrunA17_Chr7g0238201 | 78.571 | 182 | 38 | 1 | 1 | 182 | 1 | 181 | 3.35e-95 | 285 |
| Msa1149170 | MtrunA17_Chr7g0238081 | 74.176 | 182 | 39 | 1 | 282 | 463 | 1 | 174 | 1.14e-93 | 281 |
| Msa1149170 | MtrunA17_Chr7g0238031 | 72.959 | 196 | 51 | 2 | 2 | 196 | 1 | 195 | 1.43e-92 | 290 |
| Msa1149170 | MtrunA17_Chr8g0354581 | 37.649 | 502 | 233 | 12 | 8 | 464 | 1 | 467 | 5.63e-91 | 284 |
| Msa1149170 | MtrunA17_Chr7g0232521 | 70.370 | 189 | 56 | 0 | 269 | 457 | 25 | 213 | 1.31e-87 | 266 |
| Msa1149170 | MtrunA17_Chr7g0238281 | 61.538 | 182 | 69 | 1 | 283 | 464 | 3 | 183 | 3.38e-66 | 210 |
| Msa1149170 | MtrunA17_Chr1g0170061 | 51.208 | 207 | 72 | 8 | 2 | 204 | 1 | 182 | 1.44e-50 | 172 |
| Msa1149170 | MtrunA17_Chr8g0352491 | 47.027 | 185 | 83 | 2 | 294 | 463 | 2 | 186 | 1.98e-50 | 169 |
| Msa1149170 | MtrunA17_Chr8g0354621 | 49.342 | 152 | 64 | 1 | 325 | 463 | 2 | 153 | 4.23e-44 | 152 |
| Msa1149170 | MtrunA17_Chr5g0439641 | 29.252 | 441 | 247 | 14 | 46 | 462 | 49 | 448 | 2.10e-43 | 159 |
| Msa1149170 | MtrunA17_Chr5g0401791 | 28.085 | 470 | 299 | 12 | 7 | 461 | 81 | 526 | 6.88e-38 | 145 |
| Msa1149170 | MtrunA17_Chr5g0439721 | 29.099 | 433 | 247 | 12 | 43 | 461 | 46 | 432 | 1.18e-37 | 143 |
| Msa1149170 | MtrunA17_Chr8g0354611 | 35.887 | 248 | 114 | 8 | 27 | 266 | 24 | 234 | 2.19e-34 | 129 |
| Msa1149170 | MtrunA17_Chr5g0439681 | 37.079 | 178 | 107 | 2 | 286 | 462 | 136 | 309 | 1.82e-30 | 120 |
| Msa1149170 | MtrunA17_Chr8g0352501 | 43.885 | 139 | 61 | 4 | 50 | 180 | 7 | 136 | 3.87e-28 | 111 |
| Msa1149170 | MtrunA17_Chr8g0335061 | 23.799 | 458 | 284 | 11 | 21 | 453 | 15 | 432 | 1.02e-27 | 115 |
| Msa1149170 | MtrunA17_Chr8g0334971 | 25.106 | 470 | 264 | 14 | 21 | 453 | 15 | 433 | 9.48e-27 | 112 |
| Msa1149170 | MtrunA17_Chr2g0297831 | 27.571 | 457 | 268 | 17 | 14 | 457 | 54 | 460 | 1.08e-26 | 112 |
| Msa1149170 | MtrunA17_Chr8g0334951 | 25.823 | 395 | 228 | 11 | 46 | 418 | 46 | 397 | 2.79e-25 | 107 |
| Msa1149170 | MtrunA17_Chr3g0118601 | 25.157 | 477 | 281 | 18 | 12 | 461 | 22 | 449 | 3.44e-25 | 107 |
| Msa1149170 | MtrunA17_Chr2g0300311 | 26.620 | 432 | 247 | 16 | 44 | 457 | 65 | 444 | 3.56e-25 | 108 |
| Msa1149170 | MtrunA17_Chr8g0354871 | 30.870 | 230 | 135 | 7 | 244 | 461 | 164 | 381 | 2.77e-24 | 104 |
| Msa1149170 | MtrunA17_Chr8g0334911 | 25.446 | 448 | 242 | 13 | 6 | 418 | 4 | 394 | 8.36e-24 | 103 |
| Msa1149170 | MtrunA17_Chr5g0440401 | 35.196 | 179 | 106 | 4 | 286 | 461 | 43 | 214 | 1.25e-23 | 99.0 |
| Msa1149170 | MtrunA17_Chr2g0297821 | 34.973 | 183 | 110 | 7 | 287 | 463 | 4 | 183 | 2.58e-23 | 97.1 |
| Msa1149170 | MtrunA17_Chr6g0452551 | 26.957 | 460 | 273 | 19 | 4 | 457 | 2 | 404 | 4.22e-23 | 100 |
| Msa1149170 | MtrunA17_Chr6g0452611 | 26.218 | 431 | 246 | 16 | 39 | 457 | 34 | 404 | 7.30e-23 | 100 |
| Msa1149170 | MtrunA17_Chr8g0335011 | 24.839 | 467 | 273 | 12 | 39 | 453 | 46 | 486 | 1.18e-22 | 100 |
| Msa1149170 | MtrunA17_Chr7g0265891 | 24.429 | 438 | 256 | 13 | 44 | 460 | 66 | 449 | 2.08e-22 | 99.4 |
| Msa1149170 | MtrunA17_Chr6g0452161 | 26.573 | 429 | 250 | 15 | 43 | 457 | 39 | 416 | 9.07e-22 | 97.4 |
| Msa1149170 | MtrunA17_Chr6g0452591 | 25.828 | 453 | 263 | 17 | 17 | 457 | 45 | 436 | 1.92e-21 | 96.7 |
| Msa1149170 | MtrunA17_Chr6g0452501 | 25.607 | 453 | 270 | 17 | 4 | 447 | 2 | 396 | 2.49e-21 | 95.9 |
| Msa1149170 | MtrunA17_Chr6g0457371 | 26.682 | 431 | 240 | 15 | 39 | 457 | 35 | 401 | 9.48e-21 | 94.0 |
| Msa1149170 | MtrunA17_Chr6g0452531 | 25.296 | 423 | 241 | 16 | 39 | 447 | 35 | 396 | 2.21e-20 | 93.2 |
| Msa1149170 | MtrunA17_Chr8g0335071 | 23.568 | 454 | 280 | 16 | 29 | 456 | 39 | 451 | 2.91e-20 | 93.2 |
| Msa1149170 | MtrunA17_Chr6g0452561 | 24.480 | 433 | 259 | 15 | 43 | 457 | 39 | 421 | 3.15e-20 | 92.8 |
| Msa1149170 | MtrunA17_Chr8g0335021 | 23.690 | 439 | 269 | 15 | 43 | 452 | 41 | 442 | 4.14e-16 | 80.5 |
| Msa1149170 | MtrunA17_Chr6g0452571 | 29.431 | 299 | 164 | 13 | 164 | 456 | 86 | 343 | 5.73e-16 | 79.3 |
| Msa1149170 | MtrunA17_Chr6g0452601 | 31.148 | 183 | 110 | 7 | 282 | 457 | 241 | 414 | 2.12e-13 | 72.0 |
| Msa1149170 | MtrunA17_Chr7g0218171 | 30.636 | 173 | 108 | 6 | 290 | 457 | 128 | 293 | 3.45e-13 | 70.1 |
| Msa1149170 | MtrunA17_Chr4g0002901 | 29.787 | 141 | 97 | 2 | 322 | 461 | 411 | 550 | 6.88e-12 | 67.8 |
| Msa1149170 | MtrunA17_Chr7g0220521 | 28.571 | 182 | 107 | 6 | 287 | 458 | 369 | 537 | 1.07e-11 | 67.0 |
| Msa1149170 | MtrunA17_Chr4g0002911 | 29.078 | 141 | 98 | 2 | 322 | 461 | 409 | 548 | 6.57e-11 | 64.7 |
| Msa1149170 | MtrunA17_Chr6g0452541 | 29.630 | 162 | 102 | 6 | 290 | 446 | 65 | 219 | 8.40e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149170 | AT3G50120.1 | 31.264 | 451 | 260 | 19 | 29 | 461 | 105 | 523 | 4.32e-43 | 159 |
| Msa1149170 | AT3G50140.1 | 28.604 | 444 | 265 | 16 | 39 | 463 | 123 | 533 | 5.43e-37 | 143 |
| Msa1149170 | AT3G50150.1 | 25.885 | 452 | 274 | 12 | 29 | 461 | 92 | 501 | 2.43e-35 | 137 |
| Msa1149170 | AT3G50180.1 | 26.638 | 458 | 264 | 16 | 29 | 464 | 180 | 587 | 1.29e-34 | 136 |
| Msa1149170 | AT3G50130.1 | 29.451 | 455 | 264 | 19 | 29 | 463 | 141 | 558 | 2.39e-33 | 132 |
| Msa1149170 | AT3G50160.1 | 27.991 | 443 | 254 | 19 | 29 | 461 | 106 | 493 | 4.70e-33 | 131 |
| Msa1149170 | AT3G50170.1 | 25.991 | 454 | 278 | 13 | 29 | 461 | 115 | 531 | 4.89e-33 | 131 |
| Msa1149170 | AT5G22540.1 | 29.002 | 431 | 245 | 15 | 44 | 460 | 46 | 429 | 3.40e-31 | 125 |
| Msa1149170 | AT3G50190.1 | 25.115 | 434 | 246 | 14 | 46 | 461 | 113 | 485 | 1.51e-26 | 112 |
| Msa1149170 | AT3G44710.1 | 25.442 | 452 | 291 | 14 | 40 | 460 | 59 | 495 | 1.67e-26 | 112 |
| Msa1149170 | AT4G31980.1 | 26.066 | 422 | 252 | 14 | 46 | 461 | 310 | 677 | 1.19e-25 | 110 |
| Msa1149170 | AT3G47200.1 | 25.951 | 447 | 250 | 17 | 44 | 461 | 61 | 455 | 3.69e-25 | 108 |
| Msa1149170 | AT3G47200.2 | 25.951 | 447 | 250 | 17 | 44 | 461 | 61 | 455 | 3.69e-25 | 108 |
| Msa1149170 | AT5G11290.2 | 24.942 | 429 | 250 | 15 | 46 | 461 | 50 | 419 | 6.05e-25 | 107 |
| Msa1149170 | AT2G44930.1 | 27.214 | 463 | 246 | 18 | 29 | 457 | 86 | 491 | 1.38e-24 | 107 |
| Msa1149170 | AT2G28580.5 | 26.437 | 435 | 257 | 17 | 37 | 461 | 117 | 498 | 2.69e-22 | 100 |
| Msa1149170 | AT2G36430.1 | 26.147 | 436 | 253 | 14 | 46 | 464 | 62 | 445 | 3.15e-22 | 99.4 |
| Msa1149170 | AT2G28580.4 | 26.437 | 435 | 257 | 17 | 37 | 461 | 131 | 512 | 3.16e-22 | 100 |
| Msa1149170 | AT5G22550.2 | 25.054 | 463 | 263 | 17 | 43 | 460 | 58 | 481 | 1.97e-21 | 97.4 |
| Msa1149170 | AT2G28580.6 | 25.503 | 447 | 263 | 16 | 37 | 461 | 49 | 447 | 9.56e-21 | 95.1 |
| Msa1149170 | AT2G28580.1 | 25.503 | 447 | 263 | 16 | 37 | 461 | 117 | 515 | 1.07e-20 | 95.1 |
| Msa1149170 | AT3G60470.1 | 26.012 | 519 | 280 | 21 | 29 | 461 | 34 | 534 | 1.24e-20 | 95.1 |
| Msa1149170 | AT2G28580.2 | 25.503 | 447 | 263 | 16 | 37 | 461 | 131 | 529 | 1.29e-20 | 95.1 |
| Msa1149170 | AT3G47250.3 | 24.146 | 439 | 270 | 15 | 44 | 461 | 76 | 472 | 1.55e-20 | 94.4 |
| Msa1149170 | AT3G47250.2 | 24.146 | 439 | 270 | 15 | 44 | 461 | 76 | 472 | 1.55e-20 | 94.4 |
| Msa1149170 | AT3G47250.1 | 24.146 | 439 | 270 | 15 | 44 | 461 | 76 | 472 | 1.55e-20 | 94.4 |
| Msa1149170 | AT1G67150.2 | 24.153 | 472 | 256 | 13 | 27 | 464 | 6 | 409 | 2.70e-20 | 93.2 |
| Msa1149170 | AT1G67150.4 | 24.520 | 469 | 254 | 14 | 27 | 464 | 6 | 405 | 2.89e-20 | 93.2 |
| Msa1149170 | AT1G67150.1 | 24.520 | 469 | 254 | 14 | 27 | 464 | 6 | 405 | 2.89e-20 | 93.2 |
| Msa1149170 | AT1G67150.3 | 28.295 | 258 | 164 | 6 | 211 | 464 | 122 | 362 | 2.92e-18 | 86.7 |
| Msa1149170 | AT5G11290.1 | 24.638 | 345 | 203 | 11 | 128 | 461 | 52 | 350 | 1.70e-17 | 84.3 |
| Msa1149170 | AT5G22550.1 | 23.529 | 459 | 226 | 14 | 43 | 460 | 58 | 432 | 3.81e-16 | 80.9 |
| Msa1149170 | AT3G47210.1 | 24.931 | 361 | 223 | 10 | 46 | 401 | 110 | 427 | 1.59e-14 | 75.9 |
| Msa1149170 | AT3G02645.1 | 24.622 | 463 | 257 | 20 | 46 | 440 | 60 | 498 | 4.82e-12 | 68.6 |
Find 104 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACACAGAAACATATTT+TGG | 0.219166 | 7_4:+30337402 | Msa1149170:CDS |
| CTTCAGTTCATTAATGTTAT+CGG | 0.261957 | 7_4:-30336012 | None:intergenic |
| ACAGTAATGATCATGTATTT+TGG | 0.264141 | 7_4:-30337433 | None:intergenic |
| CCAAAATATGTTTCTGTGTT+AGG | 0.265552 | 7_4:-30337402 | None:intergenic |
| CGCCGGTTCCTCTTATTATC+TGG | 0.270288 | 7_4:-30336347 | None:intergenic |
| CCAGCCACCCTTTGTATCTT+TGG | 0.276352 | 7_4:-30335813 | None:intergenic |
| CTCAGTACCTTCACATCTTC+AGG | 0.311435 | 7_4:-30337297 | None:intergenic |
| CTAATAAAGGTGGTTTGTTA+TGG | 0.311880 | 7_4:+30337593 | Msa1149170:exon |
| GTGCCCTGGTTCATCAAGTT+TGG | 0.331312 | 7_4:-30336162 | None:intergenic |
| TCATTCATTCAATATGATAA+TGG | 0.337108 | 7_4:-30335716 | None:intergenic |
| ATGTTCTTTGCTACATATCT+TGG | 0.338832 | 7_4:+30336133 | Msa1149170:CDS |
| ATTTCCTCAAATGTCATCAT+TGG | 0.350708 | 7_4:+30336318 | Msa1149170:CDS |
| AAATGCGTGTTATATATAGA+TGG | 0.352305 | 7_4:-30335650 | None:intergenic |
| ACCAGGGCACATGAATATTA+AGG | 0.386593 | 7_4:+30336175 | Msa1149170:CDS |
| CCGTAGTCGTTATGAAAATC+TGG | 0.388235 | 7_4:-30337231 | None:intergenic |
| AAAGCCTTCAAGAGAGTTGC+TGG | 0.389289 | 7_4:-30336066 | None:intergenic |
| GAATATTAAGGTTGATCAAC+TGG | 0.390109 | 7_4:+30336187 | Msa1149170:CDS |
| GACACATCTCATATGCTATC+AGG | 0.391502 | 7_4:-30337209 | None:intergenic |
| TTAACCAGCAACTCTCTTGA+AGG | 0.400110 | 7_4:+30336062 | Msa1149170:CDS |
| TTAACCCGGCTTGCTAATAA+AGG | 0.402435 | 7_4:+30337580 | Msa1149170:exon |
| GTGAAGGTACTGAGATCAAA+AGG | 0.406085 | 7_4:+30337306 | Msa1149170:CDS |
| AGCAACTCTCTTGAAGGCTT+TGG | 0.407619 | 7_4:+30336068 | Msa1149170:CDS |
| ACGAAGCTATCAAAGAGAAT+TGG | 0.413469 | 7_4:+30336989 | Msa1149170:CDS |
| CACTTACTTCAGCAGTCCTT+GGG | 0.428313 | 7_4:+30337491 | Msa1149170:CDS |
| TCAGATTTGTATTGTCATGA+TGG | 0.429073 | 7_4:-30335902 | None:intergenic |
| ACACTTACTTCAGCAGTCCT+TGG | 0.430358 | 7_4:+30337490 | Msa1149170:CDS |
| ATTCAATATGATAATGGTTG+AGG | 0.434113 | 7_4:-30335710 | None:intergenic |
| CCAAAGATACAAAGGGTGGC+TGG | 0.441884 | 7_4:+30335813 | Msa1149170:CDS |
| TTGTTATGGCAATGTTGCTT+TGG | 0.445347 | 7_4:+30337607 | Msa1149170:three_prime_UTR |
| TCAAAATACCTCGAGAATAC+AGG | 0.446385 | 7_4:+30335957 | Msa1149170:CDS |
| ACTTATGATATTGAAAAGTT+CGG | 0.446976 | 7_4:-30337367 | None:intergenic |
| CAATATCATAAGTACTGACT+TGG | 0.453322 | 7_4:+30337377 | Msa1149170:CDS |
| AGGACCTATTGACACTAACT+TGG | 0.462576 | 7_4:-30335877 | None:intergenic |
| TTTCCTCAAATGTCATCATT+GGG | 0.463432 | 7_4:+30336319 | Msa1149170:CDS |
| CACCAGATAATAAGAGGAAC+CGG | 0.465341 | 7_4:+30336345 | Msa1149170:CDS |
| TTCTGCAGCGAACCATCCTT+CGG | 0.466903 | 7_4:-30337133 | None:intergenic |
| GTGTCGTCCACAACGATCTC+AGG | 0.469017 | 7_4:-30337165 | None:intergenic |
| TTCAATATGATAATGGTTGA+GGG | 0.469992 | 7_4:-30335709 | None:intergenic |
| TCAACTGGTTCTTGTGATGA+TGG | 0.477187 | 7_4:+30336202 | Msa1149170:CDS |
| TCACCCAAGTTAGTGTCAAT+AGG | 0.487618 | 7_4:+30335873 | Msa1149170:CDS |
| GAGAGAAGTACAAGCTTATG+TGG | 0.490975 | 7_4:+30335931 | Msa1149170:CDS |
| TCGGAGAAATCAATGTCTCT+TGG | 0.509592 | 7_4:-30337114 | None:intergenic |
| GGGCCACACCAGATAATAAG+AGG | 0.510517 | 7_4:+30336339 | Msa1149170:CDS |
| TTTGTATTGTCATGATGGAT+AGG | 0.510648 | 7_4:-30335897 | None:intergenic |
| ACCACCTTTATTAGCAAGCC+GGG | 0.515340 | 7_4:-30337584 | None:intergenic |
| ACCTTAATATTCATGTGCCC+TGG | 0.515664 | 7_4:-30336176 | None:intergenic |
| CGATAACATTAATGAACTGA+AGG | 0.522908 | 7_4:+30336013 | Msa1149170:CDS |
| ACGTCAAAATGATGACATAC+AGG | 0.524199 | 7_4:+30337034 | Msa1149170:CDS |
| CTGAAGATCAAGAAGATGAG+TGG | 0.525381 | 7_4:-30336459 | None:intergenic |
| CAAAGATACAAAGGGTGGCT+GGG | 0.526353 | 7_4:+30335814 | Msa1149170:CDS |
| TTCTTACTTTCATTCAGACA+TGG | 0.527343 | 7_4:+30337550 | Msa1149170:CDS |
| TGTCGTCTTTCCACAATAGC+TGG | 0.528664 | 7_4:-30336265 | None:intergenic |
| GACAATACAAATCTGAAGAC+AGG | 0.529122 | 7_4:+30335909 | Msa1149170:CDS |
| TACACGACCAAAGATACAAA+GGG | 0.534959 | 7_4:+30335806 | Msa1149170:CDS |
| ACATTTGAGGAAATCTATCA+TGG | 0.536254 | 7_4:-30336309 | None:intergenic |
| AACCACCTTTATTAGCAAGC+CGG | 0.537208 | 7_4:-30337585 | None:intergenic |
| AATGCGTGTTATATATAGAT+GGG | 0.543547 | 7_4:-30335649 | None:intergenic |
| ACGTAGTACTCCAGCTATTG+TGG | 0.547855 | 7_4:+30336255 | Msa1149170:CDS |
| TTATCATATTGAATGAATGA+TGG | 0.550502 | 7_4:+30335719 | Msa1149170:exon |
| TCTCATATGCTATCAGGTTG+AGG | 0.554475 | 7_4:-30337203 | None:intergenic |
| CAACTTCCTCATCACTCCCA+AGG | 0.554939 | 7_4:-30337344 | None:intergenic |
| AGAGACATTGATTTCTCCGA+AGG | 0.558859 | 7_4:+30337117 | Msa1149170:CDS |
| ACATTGATTTCTCCGAAGGA+TGG | 0.559725 | 7_4:+30337121 | Msa1149170:CDS |
| AAGAAGATGAGTGGGTGTCT+CGG | 0.564413 | 7_4:-30336450 | None:intergenic |
| ACCCGGCTTGCTAATAAAGG+TGG | 0.571281 | 7_4:+30337583 | Msa1149170:exon |
| GTTCCTCTTATTATCTGGTG+TGG | 0.571609 | 7_4:-30336342 | None:intergenic |
| GACATGGTTTGCGATTAACC+CGG | 0.572438 | 7_4:+30337566 | Msa1149170:CDS |
| CAATCAAGAGACTAGCAATA+CGG | 0.578651 | 7_4:+30336379 | Msa1149170:CDS |
| AACTTCCTCATCACTCCCAA+GGG | 0.581619 | 7_4:-30337343 | None:intergenic |
| ATAATAAGAGGAACCGGCGG+GGG | 0.582586 | 7_4:+30336351 | Msa1149170:CDS |
| AGCAGCAATGAATGCAGTAA+TGG | 0.582740 | 7_4:-30337514 | None:intergenic |
| ATACAAGATCTAAAAGCAGT+AGG | 0.583283 | 7_4:+30337060 | Msa1149170:CDS |
| AAAGCCAAACTTGATGAACC+AGG | 0.591667 | 7_4:+30336158 | Msa1149170:CDS |
| CGACCATCCTGAAGATGTGA+AGG | 0.592905 | 7_4:+30337290 | Msa1149170:CDS |
| AATAGCTGGAGTACTACGTA+AGG | 0.594565 | 7_4:-30336251 | None:intergenic |
| TGTGTAGATCGCGTGGATTG+CGG | 0.595178 | 7_4:-30335980 | None:intergenic |
| TGAAGGTACTGAGATCAAAA+GGG | 0.595602 | 7_4:+30337307 | Msa1149170:CDS |
| AGATAATAAGAGGAACCGGC+GGG | 0.597777 | 7_4:+30336349 | Msa1149170:CDS |
| TAGTGTACTTCACTTCTCTG+TGG | 0.599204 | 7_4:+30337720 | Msa1149170:three_prime_UTR |
| ATACACGACCAAAGATACAA+AGG | 0.606866 | 7_4:+30335805 | Msa1149170:CDS |
| GGACCTATTGACACTAACTT+GGG | 0.613813 | 7_4:-30335876 | None:intergenic |
| AATTCTTCCTGAGATCGTTG+TGG | 0.616047 | 7_4:+30337158 | Msa1149170:CDS |
| CAATTCCCTTGGGAGTGATG+AGG | 0.618966 | 7_4:+30337338 | Msa1149170:CDS |
| GATAATAAGAGGAACCGGCG+GGG | 0.620009 | 7_4:+30336350 | Msa1149170:CDS |
| ACTGTAATAGATGCAATACA+TGG | 0.620243 | 7_4:+30337451 | Msa1149170:CDS |
| TGAAGATCAAGAAGATGAGT+GGG | 0.623872 | 7_4:-30336458 | None:intergenic |
| CCTCATTACATCTACACCAA+AGG | 0.626155 | 7_4:+30336493 | Msa1149170:CDS |
| GCCTTGAAGAAAAGTTGTCG+TGG | 0.631104 | 7_4:+30336093 | Msa1149170:CDS |
| TCTGAATGAAAGTAAGAACA+AGG | 0.635749 | 7_4:-30337545 | None:intergenic |
| TGGCCCAATGATGACATTTG+AGG | 0.640812 | 7_4:-30336322 | None:intergenic |
| ATGAATGCAGTAATGGCCCA+AGG | 0.644228 | 7_4:-30337507 | None:intergenic |
| GACTTAAGTCAAGCAAGACA+CGG | 0.649997 | 7_4:+30337088 | Msa1149170:CDS |
| AGAGAAGTACAAGCTTATGT+GGG | 0.651797 | 7_4:+30335932 | Msa1149170:CDS |
| CAGATAATAAGAGGAACCGG+CGG | 0.653004 | 7_4:+30336348 | Msa1149170:CDS |
| CCTTTGGTGTAGATGTAATG+AGG | 0.653969 | 7_4:-30336493 | None:intergenic |
| ATGCAATACATGGATAGCAG+AGG | 0.664321 | 7_4:+30337461 | Msa1149170:CDS |
| GATAACATTAATGAACTGAA+GGG | 0.666325 | 7_4:+30336014 | Msa1149170:CDS |
| GTACCTTCACATCTTCAGGA+TGG | 0.667216 | 7_4:-30337293 | None:intergenic |
| TATCAGGTTGAGGAAAGTAG+TGG | 0.679035 | 7_4:-30337193 | None:intergenic |
| AAGCCAAACTTGATGAACCA+GGG | 0.679370 | 7_4:+30336159 | Msa1149170:CDS |
| GATTGCGGCCTGTATTCTCG+AGG | 0.689516 | 7_4:-30335965 | None:intergenic |
| CTGAATGAAAGTAAGAACAA+GGG | 0.695408 | 7_4:-30337544 | None:intergenic |
| ACGACCAAAGATACAAAGGG+TGG | 0.724861 | 7_4:+30335809 | Msa1149170:CDS |
| TTAAGTCAAGCAAGACACGG+AGG | 0.791033 | 7_4:+30337091 | Msa1149170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTTGAAAATTAATGAT+AGG | - | chr7_4:30336679-30336698 | None:intergenic | 15.0% |
| !!! | CAAAATGTGATATTTTATTA+CGG | + | chr7_4:30336892-30336911 | Msa1149170:intron | 15.0% |
| !!! | ATCTATGTTTTAAACATAAA+TGG | - | chr7_4:30336961-30336980 | None:intergenic | 15.0% |
| !! | AAAAGTTGAAAATTAATGAT+AGG | - | chr7_4:30336679-30336698 | None:intergenic | 15.0% |
| !!! | CAAAATGTGATATTTTATTA+CGG | + | chr7_4:30336892-30336911 | Msa1149170:intron | 15.0% |
| !!! | ATCTATGTTTTAAACATAAA+TGG | - | chr7_4:30336961-30336980 | None:intergenic | 15.0% |
| !! | TCATTCATTCAATATGATAA+TGG | - | chr7_4:30335719-30335738 | None:intergenic | 20.0% |
| !! | TTATCATATTGAATGAATGA+TGG | + | chr7_4:30335719-30335738 | Msa1149170:exon | 20.0% |
| !! | AAATAACGACAGAAATATTA+GGG | + | chr7_4:30336524-30336543 | Msa1149170:intron | 20.0% |
| !! | TGAAATTTAGAAATGGAAAA+AGG | - | chr7_4:30336618-30336637 | None:intergenic | 20.0% |
| !! | ATAGTGATGAAATTTAGAAA+TGG | - | chr7_4:30336625-30336644 | None:intergenic | 20.0% |
| !!! | TGTTTTAAACATAAATGGAT+TGG | - | chr7_4:30336956-30336975 | None:intergenic | 20.0% |
| !! | ACTTATGATATTGAAAAGTT+CGG | - | chr7_4:30337370-30337389 | None:intergenic | 20.0% |
| !! | TAAGATTTCGTAACAAAAAT+AGG | + | chr7_4:30337642-30337661 | Msa1149170:intron | 20.0% |
| !! | TCATTCATTCAATATGATAA+TGG | - | chr7_4:30335719-30335738 | None:intergenic | 20.0% |
| !! | TTATCATATTGAATGAATGA+TGG | + | chr7_4:30335719-30335738 | Msa1149170:exon | 20.0% |
| !! | AAATAACGACAGAAATATTA+GGG | + | chr7_4:30336524-30336543 | Msa1149170:intron | 20.0% |
| !! | TGAAATTTAGAAATGGAAAA+AGG | - | chr7_4:30336618-30336637 | None:intergenic | 20.0% |
| !! | ATAGTGATGAAATTTAGAAA+TGG | - | chr7_4:30336625-30336644 | None:intergenic | 20.0% |
| !!! | TGTTTTAAACATAAATGGAT+TGG | - | chr7_4:30336956-30336975 | None:intergenic | 20.0% |
| !! | ACTTATGATATTGAAAAGTT+CGG | - | chr7_4:30337370-30337389 | None:intergenic | 20.0% |
| !! | TAAGATTTCGTAACAAAAAT+AGG | + | chr7_4:30337642-30337661 | Msa1149170:intron | 20.0% |
| ! | AATGCGTGTTATATATAGAT+GGG | - | chr7_4:30335652-30335671 | None:intergenic | 25.0% |
| ! | AAATGCGTGTTATATATAGA+TGG | - | chr7_4:30335653-30335672 | None:intergenic | 25.0% |
| !!! | TTCAATATGATAATGGTTGA+GGG | - | chr7_4:30335712-30335731 | None:intergenic | 25.0% |
| !!! | ATTCAATATGATAATGGTTG+AGG | - | chr7_4:30335713-30335732 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCAAGGGTAGTTT+GGG | - | chr7_4:30335748-30335767 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCAAGGGTAGTT+TGG | - | chr7_4:30335749-30335768 | None:intergenic | 25.0% |
| ! | TACCCTTGAAAAAAAAATTG+TGG | + | chr7_4:30335752-30335771 | Msa1149170:CDS | 25.0% |
| !!! | CTCCACAATTTTTTTTTCAA+GGG | - | chr7_4:30335757-30335776 | None:intergenic | 25.0% |
| ! | CTTCAGTTCATTAATGTTAT+CGG | - | chr7_4:30336015-30336034 | None:intergenic | 25.0% |
| ! | GATAACATTAATGAACTGAA+GGG | + | chr7_4:30336014-30336033 | Msa1149170:CDS | 25.0% |
| ! | GAAATAACGACAGAAATATT+AGG | + | chr7_4:30336523-30336542 | Msa1149170:intron | 25.0% |
| !!! | CAACTTTTTGAGAAATATAC+TGG | + | chr7_4:30336691-30336710 | Msa1149170:intron | 25.0% |
| !! | TGATATTTTATTACGGTAAG+AGG | + | chr7_4:30336899-30336918 | Msa1149170:intron | 25.0% |
| !! | ACAGTAATGATCATGTATTT+TGG | - | chr7_4:30337436-30337455 | None:intergenic | 25.0% |
| ! | AATGCGTGTTATATATAGAT+GGG | - | chr7_4:30335652-30335671 | None:intergenic | 25.0% |
| ! | AAATGCGTGTTATATATAGA+TGG | - | chr7_4:30335653-30335672 | None:intergenic | 25.0% |
| !!! | TTCAATATGATAATGGTTGA+GGG | - | chr7_4:30335712-30335731 | None:intergenic | 25.0% |
| !!! | ATTCAATATGATAATGGTTG+AGG | - | chr7_4:30335713-30335732 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCAAGGGTAGTTT+GGG | - | chr7_4:30335748-30335767 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCAAGGGTAGTT+TGG | - | chr7_4:30335749-30335768 | None:intergenic | 25.0% |
| ! | TACCCTTGAAAAAAAAATTG+TGG | + | chr7_4:30335752-30335771 | Msa1149170:CDS | 25.0% |
| !!! | CTCCACAATTTTTTTTTCAA+GGG | - | chr7_4:30335757-30335776 | None:intergenic | 25.0% |
| ! | CTTCAGTTCATTAATGTTAT+CGG | - | chr7_4:30336015-30336034 | None:intergenic | 25.0% |
| ! | GATAACATTAATGAACTGAA+GGG | + | chr7_4:30336014-30336033 | Msa1149170:CDS | 25.0% |
| ! | GAAATAACGACAGAAATATT+AGG | + | chr7_4:30336523-30336542 | Msa1149170:intron | 25.0% |
| !!! | CAACTTTTTGAGAAATATAC+TGG | + | chr7_4:30336691-30336710 | Msa1149170:intron | 25.0% |
| !! | TGATATTTTATTACGGTAAG+AGG | + | chr7_4:30336899-30336918 | Msa1149170:intron | 25.0% |
| !! | ACAGTAATGATCATGTATTT+TGG | - | chr7_4:30337436-30337455 | None:intergenic | 25.0% |
| !!! | GCTCCACAATTTTTTTTTCA+AGG | - | chr7_4:30335758-30335777 | None:intergenic | 30.0% |
| !! | TTTGTATTGTCATGATGGAT+AGG | - | chr7_4:30335900-30335919 | None:intergenic | 30.0% |
| TCAGATTTGTATTGTCATGA+TGG | - | chr7_4:30335905-30335924 | None:intergenic | 30.0% | |
| CGATAACATTAATGAACTGA+AGG | + | chr7_4:30336013-30336032 | Msa1149170:CDS | 30.0% | |
| ATGTTCTTTGCTACATATCT+TGG | + | chr7_4:30336133-30336152 | Msa1149170:CDS | 30.0% | |
| ! | GAATATTAAGGTTGATCAAC+TGG | + | chr7_4:30336187-30336206 | Msa1149170:CDS | 30.0% |
| ACATTTGAGGAAATCTATCA+TGG | - | chr7_4:30336312-30336331 | None:intergenic | 30.0% | |
| ATTTCCTCAAATGTCATCAT+TGG | + | chr7_4:30336318-30336337 | Msa1149170:CDS | 30.0% | |
| TTTCCTCAAATGTCATCATT+GGG | + | chr7_4:30336319-30336338 | Msa1149170:CDS | 30.0% | |
| !! | TGTTCTTTTCCTTTTTTGTC+TGG | - | chr7_4:30336407-30336426 | None:intergenic | 30.0% |
| !! | CGTTATTTCTATTGTACCTT+TGG | - | chr7_4:30336512-30336531 | None:intergenic | 30.0% |
| !! | TGTCTTTAAAACTTAACGAC+AGG | + | chr7_4:30336575-30336594 | Msa1149170:intron | 30.0% |
| TGTGCATAATAGTGATTAGA+GGG | + | chr7_4:30336795-30336814 | Msa1149170:intron | 30.0% | |
| !! | ATCATTTTGACGTTTTCATC+TGG | - | chr7_4:30337027-30337046 | None:intergenic | 30.0% |
| ATACAAGATCTAAAAGCAGT+AGG | + | chr7_4:30337060-30337079 | Msa1149170:CDS | 30.0% | |
| !! | CAATATCATAAGTACTGACT+TGG | + | chr7_4:30337377-30337396 | Msa1149170:CDS | 30.0% |
| ! | CCAAAATATGTTTCTGTGTT+AGG | - | chr7_4:30337405-30337424 | None:intergenic | 30.0% |
| ! | CCTAACACAGAAACATATTT+TGG | + | chr7_4:30337402-30337421 | Msa1149170:CDS | 30.0% |
| ACTGTAATAGATGCAATACA+TGG | + | chr7_4:30337451-30337470 | Msa1149170:CDS | 30.0% | |
| CTGAATGAAAGTAAGAACAA+GGG | - | chr7_4:30337547-30337566 | None:intergenic | 30.0% | |
| TCTGAATGAAAGTAAGAACA+AGG | - | chr7_4:30337548-30337567 | None:intergenic | 30.0% | |
| TTCTTACTTTCATTCAGACA+TGG | + | chr7_4:30337550-30337569 | Msa1149170:CDS | 30.0% | |
| !! | CTAATAAAGGTGGTTTGTTA+TGG | + | chr7_4:30337593-30337612 | Msa1149170:exon | 30.0% |
| GTAATAATTGTCATCTGGTA+AGG | + | chr7_4:30337693-30337712 | Msa1149170:intron | 30.0% | |
| !!! | GCTCCACAATTTTTTTTTCA+AGG | - | chr7_4:30335758-30335777 | None:intergenic | 30.0% |
| !! | TTTGTATTGTCATGATGGAT+AGG | - | chr7_4:30335900-30335919 | None:intergenic | 30.0% |
| TCAGATTTGTATTGTCATGA+TGG | - | chr7_4:30335905-30335924 | None:intergenic | 30.0% | |
| CGATAACATTAATGAACTGA+AGG | + | chr7_4:30336013-30336032 | Msa1149170:CDS | 30.0% | |
| ATGTTCTTTGCTACATATCT+TGG | + | chr7_4:30336133-30336152 | Msa1149170:CDS | 30.0% | |
| ! | GAATATTAAGGTTGATCAAC+TGG | + | chr7_4:30336187-30336206 | Msa1149170:CDS | 30.0% |
| ACATTTGAGGAAATCTATCA+TGG | - | chr7_4:30336312-30336331 | None:intergenic | 30.0% | |
| ATTTCCTCAAATGTCATCAT+TGG | + | chr7_4:30336318-30336337 | Msa1149170:CDS | 30.0% | |
| TTTCCTCAAATGTCATCATT+GGG | + | chr7_4:30336319-30336338 | Msa1149170:CDS | 30.0% | |
| !! | TGTTCTTTTCCTTTTTTGTC+TGG | - | chr7_4:30336407-30336426 | None:intergenic | 30.0% |
| !! | CGTTATTTCTATTGTACCTT+TGG | - | chr7_4:30336512-30336531 | None:intergenic | 30.0% |
| !! | TGTCTTTAAAACTTAACGAC+AGG | + | chr7_4:30336575-30336594 | Msa1149170:intron | 30.0% |
| TGTGCATAATAGTGATTAGA+GGG | + | chr7_4:30336795-30336814 | Msa1149170:intron | 30.0% | |
| !! | ATCATTTTGACGTTTTCATC+TGG | - | chr7_4:30337027-30337046 | None:intergenic | 30.0% |
| ATACAAGATCTAAAAGCAGT+AGG | + | chr7_4:30337060-30337079 | Msa1149170:CDS | 30.0% | |
| !! | CAATATCATAAGTACTGACT+TGG | + | chr7_4:30337377-30337396 | Msa1149170:CDS | 30.0% |
| ! | CCAAAATATGTTTCTGTGTT+AGG | - | chr7_4:30337405-30337424 | None:intergenic | 30.0% |
| ! | CCTAACACAGAAACATATTT+TGG | + | chr7_4:30337402-30337421 | Msa1149170:CDS | 30.0% |
| ACTGTAATAGATGCAATACA+TGG | + | chr7_4:30337451-30337470 | Msa1149170:CDS | 30.0% | |
| CTGAATGAAAGTAAGAACAA+GGG | - | chr7_4:30337547-30337566 | None:intergenic | 30.0% | |
| TCTGAATGAAAGTAAGAACA+AGG | - | chr7_4:30337548-30337567 | None:intergenic | 30.0% | |
| TTCTTACTTTCATTCAGACA+TGG | + | chr7_4:30337550-30337569 | Msa1149170:CDS | 30.0% | |
| !! | CTAATAAAGGTGGTTTGTTA+TGG | + | chr7_4:30337593-30337612 | Msa1149170:exon | 30.0% |
| GTAATAATTGTCATCTGGTA+AGG | + | chr7_4:30337693-30337712 | Msa1149170:intron | 30.0% | |
| ! | ATCTTTGGTCGTGTATTTTG+TGG | - | chr7_4:30335801-30335820 | None:intergenic | 35.0% |
| ATACACGACCAAAGATACAA+AGG | + | chr7_4:30335805-30335824 | Msa1149170:CDS | 35.0% | |
| TACACGACCAAAGATACAAA+GGG | + | chr7_4:30335806-30335825 | Msa1149170:CDS | 35.0% | |
| GACAATACAAATCTGAAGAC+AGG | + | chr7_4:30335909-30335928 | Msa1149170:CDS | 35.0% | |
| ! | AGAGAAGTACAAGCTTATGT+GGG | + | chr7_4:30335932-30335951 | Msa1149170:CDS | 35.0% |
| TCAAAATACCTCGAGAATAC+AGG | + | chr7_4:30335957-30335976 | Msa1149170:CDS | 35.0% | |
| CAATCAAGAGACTAGCAATA+CGG | + | chr7_4:30336379-30336398 | Msa1149170:CDS | 35.0% | |
| AATACGGTTCCAGACAAAAA+AGG | + | chr7_4:30336395-30336414 | Msa1149170:CDS | 35.0% | |
| TGAAGATCAAGAAGATGAGT+GGG | - | chr7_4:30336461-30336480 | None:intergenic | 35.0% | |
| AATACTAGCATGTGCAGTAA+GGG | - | chr7_4:30336744-30336763 | None:intergenic | 35.0% | |
| AAATACTAGCATGTGCAGTA+AGG | - | chr7_4:30336745-30336764 | None:intergenic | 35.0% | |
| TGCTAGTATTTACAAAGTCG+AGG | + | chr7_4:30336754-30336773 | Msa1149170:intron | 35.0% | |
| TCGAGGATAGTGATTAGATA+GGG | + | chr7_4:30336771-30336790 | Msa1149170:intron | 35.0% | |
| GTGTGCATAATAGTGATTAG+AGG | + | chr7_4:30336794-30336813 | Msa1149170:intron | 35.0% | |
| ACGAAGCTATCAAAGAGAAT+TGG | + | chr7_4:30336989-30337008 | Msa1149170:CDS | 35.0% | |
| ACGTCAAAATGATGACATAC+AGG | + | chr7_4:30337034-30337053 | Msa1149170:CDS | 35.0% | |
| ! | CCAGATTTTCATAACGACTA+CGG | + | chr7_4:30337231-30337250 | Msa1149170:CDS | 35.0% |
| ! | CAGATTTTCATAACGACTAC+GGG | + | chr7_4:30337232-30337251 | Msa1149170:CDS | 35.0% |
| ! | TTGTTCTTTTGCAGCTTTCA+TGG | + | chr7_4:30337257-30337276 | Msa1149170:CDS | 35.0% |
| !! | TGAAGGTACTGAGATCAAAA+GGG | + | chr7_4:30337307-30337326 | Msa1149170:CDS | 35.0% |
| ! | TTGTTATGGCAATGTTGCTT+TGG | + | chr7_4:30337607-30337626 | Msa1149170:three_prime_UTR | 35.0% |
| ! | ATCTTTGGTCGTGTATTTTG+TGG | - | chr7_4:30335801-30335820 | None:intergenic | 35.0% |
| ATACACGACCAAAGATACAA+AGG | + | chr7_4:30335805-30335824 | Msa1149170:CDS | 35.0% | |
| TACACGACCAAAGATACAAA+GGG | + | chr7_4:30335806-30335825 | Msa1149170:CDS | 35.0% | |
| GACAATACAAATCTGAAGAC+AGG | + | chr7_4:30335909-30335928 | Msa1149170:CDS | 35.0% | |
| ! | AGAGAAGTACAAGCTTATGT+GGG | + | chr7_4:30335932-30335951 | Msa1149170:CDS | 35.0% |
| TCAAAATACCTCGAGAATAC+AGG | + | chr7_4:30335957-30335976 | Msa1149170:CDS | 35.0% | |
| CAATCAAGAGACTAGCAATA+CGG | + | chr7_4:30336379-30336398 | Msa1149170:CDS | 35.0% | |
| AATACGGTTCCAGACAAAAA+AGG | + | chr7_4:30336395-30336414 | Msa1149170:CDS | 35.0% | |
| TGAAGATCAAGAAGATGAGT+GGG | - | chr7_4:30336461-30336480 | None:intergenic | 35.0% | |
| AATACTAGCATGTGCAGTAA+GGG | - | chr7_4:30336744-30336763 | None:intergenic | 35.0% | |
| AAATACTAGCATGTGCAGTA+AGG | - | chr7_4:30336745-30336764 | None:intergenic | 35.0% | |
| TGCTAGTATTTACAAAGTCG+AGG | + | chr7_4:30336754-30336773 | Msa1149170:intron | 35.0% | |
| TCGAGGATAGTGATTAGATA+GGG | + | chr7_4:30336771-30336790 | Msa1149170:intron | 35.0% | |
| GTGTGCATAATAGTGATTAG+AGG | + | chr7_4:30336794-30336813 | Msa1149170:intron | 35.0% | |
| ACGAAGCTATCAAAGAGAAT+TGG | + | chr7_4:30336989-30337008 | Msa1149170:CDS | 35.0% | |
| ACGTCAAAATGATGACATAC+AGG | + | chr7_4:30337034-30337053 | Msa1149170:CDS | 35.0% | |
| ! | CCAGATTTTCATAACGACTA+CGG | + | chr7_4:30337231-30337250 | Msa1149170:CDS | 35.0% |
| ! | CAGATTTTCATAACGACTAC+GGG | + | chr7_4:30337232-30337251 | Msa1149170:CDS | 35.0% |
| ! | TTGTTCTTTTGCAGCTTTCA+TGG | + | chr7_4:30337257-30337276 | Msa1149170:CDS | 35.0% |
| !! | TGAAGGTACTGAGATCAAAA+GGG | + | chr7_4:30337307-30337326 | Msa1149170:CDS | 35.0% |
| ! | TTGTTATGGCAATGTTGCTT+TGG | + | chr7_4:30337607-30337626 | Msa1149170:three_prime_UTR | 35.0% |
| TCACCCAAGTTAGTGTCAAT+AGG | + | chr7_4:30335873-30335892 | Msa1149170:CDS | 40.0% | |
| GGACCTATTGACACTAACTT+GGG | - | chr7_4:30335879-30335898 | None:intergenic | 40.0% | |
| AGGACCTATTGACACTAACT+TGG | - | chr7_4:30335880-30335899 | None:intergenic | 40.0% | |
| ! | GAGAGAAGTACAAGCTTATG+TGG | + | chr7_4:30335931-30335950 | Msa1149170:CDS | 40.0% |
| ! | ATCTTTTTGTGTAGATCGCG+TGG | - | chr7_4:30335990-30336009 | None:intergenic | 40.0% |
| TTAACCAGCAACTCTCTTGA+AGG | + | chr7_4:30336062-30336081 | Msa1149170:CDS | 40.0% | |
| ! | TCCACGACAACTTTTCTTCA+AGG | - | chr7_4:30336097-30336116 | None:intergenic | 40.0% |
| AAAGCCAAACTTGATGAACC+AGG | + | chr7_4:30336158-30336177 | Msa1149170:CDS | 40.0% | |
| AAGCCAAACTTGATGAACCA+GGG | + | chr7_4:30336159-30336178 | Msa1149170:CDS | 40.0% | |
| ACCAGGGCACATGAATATTA+AGG | + | chr7_4:30336175-30336194 | Msa1149170:CDS | 40.0% | |
| ACCTTAATATTCATGTGCCC+TGG | - | chr7_4:30336179-30336198 | None:intergenic | 40.0% | |
| ! | TCAACTGGTTCTTGTGATGA+TGG | + | chr7_4:30336202-30336221 | Msa1149170:CDS | 40.0% |
| !!! | GATGATGGATGTGCTTTTGT+TGG | + | chr7_4:30336217-30336236 | Msa1149170:CDS | 40.0% |
| ! | AATAGCTGGAGTACTACGTA+AGG | - | chr7_4:30336254-30336273 | None:intergenic | 40.0% |
| GTTCCTCTTATTATCTGGTG+TGG | - | chr7_4:30336345-30336364 | None:intergenic | 40.0% | |
| CACCAGATAATAAGAGGAAC+CGG | + | chr7_4:30336345-30336364 | Msa1149170:CDS | 40.0% | |
| CTGAAGATCAAGAAGATGAG+TGG | - | chr7_4:30336462-30336481 | None:intergenic | 40.0% | |
| ! | CCTTTGGTGTAGATGTAATG+AGG | - | chr7_4:30336496-30336515 | None:intergenic | 40.0% |
| CCTCATTACATCTACACCAA+AGG | + | chr7_4:30336493-30336512 | Msa1149170:CDS | 40.0% | |
| GTCGAGGATAGTGATTAGAT+AGG | + | chr7_4:30336770-30336789 | Msa1149170:intron | 40.0% | |
| CGAGGATAGTGATTAGATAG+GGG | + | chr7_4:30336772-30336791 | Msa1149170:intron | 40.0% | |
| GACTTAAGTCAAGCAAGACA+CGG | + | chr7_4:30337088-30337107 | Msa1149170:CDS | 40.0% | |
| TCGGAGAAATCAATGTCTCT+TGG | - | chr7_4:30337117-30337136 | None:intergenic | 40.0% | |
| !! | AGAGACATTGATTTCTCCGA+AGG | + | chr7_4:30337117-30337136 | Msa1149170:CDS | 40.0% |
| !! | ACATTGATTTCTCCGAAGGA+TGG | + | chr7_4:30337121-30337140 | Msa1149170:CDS | 40.0% |
| AATTCTTCCTGAGATCGTTG+TGG | + | chr7_4:30337158-30337177 | Msa1149170:CDS | 40.0% | |
| !! | TATCAGGTTGAGGAAAGTAG+TGG | - | chr7_4:30337196-30337215 | None:intergenic | 40.0% |
| ! | TCTCATATGCTATCAGGTTG+AGG | - | chr7_4:30337206-30337225 | None:intergenic | 40.0% |
| GACACATCTCATATGCTATC+AGG | - | chr7_4:30337212-30337231 | None:intergenic | 40.0% | |
| CCGTAGTCGTTATGAAAATC+TGG | - | chr7_4:30337234-30337253 | None:intergenic | 40.0% | |
| !! | GTGAAGGTACTGAGATCAAA+AGG | + | chr7_4:30337306-30337325 | Msa1149170:CDS | 40.0% |
| ! | GGATTTTGCTCAATTCCCTT+GGG | + | chr7_4:30337328-30337347 | Msa1149170:CDS | 40.0% |
| ATGCAATACATGGATAGCAG+AGG | + | chr7_4:30337461-30337480 | Msa1149170:CDS | 40.0% | |
| AGCAGCAATGAATGCAGTAA+TGG | - | chr7_4:30337517-30337536 | None:intergenic | 40.0% | |
| !! | TTAACCCGGCTTGCTAATAA+AGG | + | chr7_4:30337580-30337599 | Msa1149170:exon | 40.0% |
| AACCACCTTTATTAGCAAGC+CGG | - | chr7_4:30337588-30337607 | None:intergenic | 40.0% | |
| !! | ATGGCAATGTTGCTTTGGTA+CGG | + | chr7_4:30337612-30337631 | Msa1149170:intron | 40.0% |
| AAAATAGGTCGAGTGTGTGT+TGG | + | chr7_4:30337657-30337676 | Msa1149170:intron | 40.0% | |
| CAGATGACAATTATTACGCG+TGG | - | chr7_4:30337690-30337709 | None:intergenic | 40.0% | |
| CACGCGTAATAATTGTCATC+TGG | + | chr7_4:30337688-30337707 | Msa1149170:intron | 40.0% | |
| TAGTGTACTTCACTTCTCTG+TGG | + | chr7_4:30337720-30337739 | Msa1149170:three_prime_UTR | 40.0% | |
| TCACCCAAGTTAGTGTCAAT+AGG | + | chr7_4:30335873-30335892 | Msa1149170:CDS | 40.0% | |
| GGACCTATTGACACTAACTT+GGG | - | chr7_4:30335879-30335898 | None:intergenic | 40.0% | |
| AGGACCTATTGACACTAACT+TGG | - | chr7_4:30335880-30335899 | None:intergenic | 40.0% | |
| ! | GAGAGAAGTACAAGCTTATG+TGG | + | chr7_4:30335931-30335950 | Msa1149170:CDS | 40.0% |
| ! | ATCTTTTTGTGTAGATCGCG+TGG | - | chr7_4:30335990-30336009 | None:intergenic | 40.0% |
| TTAACCAGCAACTCTCTTGA+AGG | + | chr7_4:30336062-30336081 | Msa1149170:CDS | 40.0% | |
| ! | TCCACGACAACTTTTCTTCA+AGG | - | chr7_4:30336097-30336116 | None:intergenic | 40.0% |
| AAAGCCAAACTTGATGAACC+AGG | + | chr7_4:30336158-30336177 | Msa1149170:CDS | 40.0% | |
| AAGCCAAACTTGATGAACCA+GGG | + | chr7_4:30336159-30336178 | Msa1149170:CDS | 40.0% | |
| ACCAGGGCACATGAATATTA+AGG | + | chr7_4:30336175-30336194 | Msa1149170:CDS | 40.0% | |
| ACCTTAATATTCATGTGCCC+TGG | - | chr7_4:30336179-30336198 | None:intergenic | 40.0% | |
| ! | TCAACTGGTTCTTGTGATGA+TGG | + | chr7_4:30336202-30336221 | Msa1149170:CDS | 40.0% |
| !!! | GATGATGGATGTGCTTTTGT+TGG | + | chr7_4:30336217-30336236 | Msa1149170:CDS | 40.0% |
| ! | AATAGCTGGAGTACTACGTA+AGG | - | chr7_4:30336254-30336273 | None:intergenic | 40.0% |
| GTTCCTCTTATTATCTGGTG+TGG | - | chr7_4:30336345-30336364 | None:intergenic | 40.0% | |
| CACCAGATAATAAGAGGAAC+CGG | + | chr7_4:30336345-30336364 | Msa1149170:CDS | 40.0% | |
| CTGAAGATCAAGAAGATGAG+TGG | - | chr7_4:30336462-30336481 | None:intergenic | 40.0% | |
| ! | CCTTTGGTGTAGATGTAATG+AGG | - | chr7_4:30336496-30336515 | None:intergenic | 40.0% |
| CCTCATTACATCTACACCAA+AGG | + | chr7_4:30336493-30336512 | Msa1149170:CDS | 40.0% | |
| GTCGAGGATAGTGATTAGAT+AGG | + | chr7_4:30336770-30336789 | Msa1149170:intron | 40.0% | |
| CGAGGATAGTGATTAGATAG+GGG | + | chr7_4:30336772-30336791 | Msa1149170:intron | 40.0% | |
| GACTTAAGTCAAGCAAGACA+CGG | + | chr7_4:30337088-30337107 | Msa1149170:CDS | 40.0% | |
| TCGGAGAAATCAATGTCTCT+TGG | - | chr7_4:30337117-30337136 | None:intergenic | 40.0% | |
| !! | AGAGACATTGATTTCTCCGA+AGG | + | chr7_4:30337117-30337136 | Msa1149170:CDS | 40.0% |
| !! | ACATTGATTTCTCCGAAGGA+TGG | + | chr7_4:30337121-30337140 | Msa1149170:CDS | 40.0% |
| AATTCTTCCTGAGATCGTTG+TGG | + | chr7_4:30337158-30337177 | Msa1149170:CDS | 40.0% | |
| !! | TATCAGGTTGAGGAAAGTAG+TGG | - | chr7_4:30337196-30337215 | None:intergenic | 40.0% |
| ! | TCTCATATGCTATCAGGTTG+AGG | - | chr7_4:30337206-30337225 | None:intergenic | 40.0% |
| GACACATCTCATATGCTATC+AGG | - | chr7_4:30337212-30337231 | None:intergenic | 40.0% | |
| CCGTAGTCGTTATGAAAATC+TGG | - | chr7_4:30337234-30337253 | None:intergenic | 40.0% | |
| !! | GTGAAGGTACTGAGATCAAA+AGG | + | chr7_4:30337306-30337325 | Msa1149170:CDS | 40.0% |
| ! | GGATTTTGCTCAATTCCCTT+GGG | + | chr7_4:30337328-30337347 | Msa1149170:CDS | 40.0% |
| ATGCAATACATGGATAGCAG+AGG | + | chr7_4:30337461-30337480 | Msa1149170:CDS | 40.0% | |
| AGCAGCAATGAATGCAGTAA+TGG | - | chr7_4:30337517-30337536 | None:intergenic | 40.0% | |
| !! | TTAACCCGGCTTGCTAATAA+AGG | + | chr7_4:30337580-30337599 | Msa1149170:exon | 40.0% |
| AACCACCTTTATTAGCAAGC+CGG | - | chr7_4:30337588-30337607 | None:intergenic | 40.0% | |
| !! | ATGGCAATGTTGCTTTGGTA+CGG | + | chr7_4:30337612-30337631 | Msa1149170:intron | 40.0% |
| AAAATAGGTCGAGTGTGTGT+TGG | + | chr7_4:30337657-30337676 | Msa1149170:intron | 40.0% | |
| CAGATGACAATTATTACGCG+TGG | - | chr7_4:30337690-30337709 | None:intergenic | 40.0% | |
| CACGCGTAATAATTGTCATC+TGG | + | chr7_4:30337688-30337707 | Msa1149170:intron | 40.0% | |
| TAGTGTACTTCACTTCTCTG+TGG | + | chr7_4:30337720-30337739 | Msa1149170:three_prime_UTR | 40.0% | |
| ACGACCAAAGATACAAAGGG+TGG | + | chr7_4:30335809-30335828 | Msa1149170:CDS | 45.0% | |
| CAAAGATACAAAGGGTGGCT+GGG | + | chr7_4:30335814-30335833 | Msa1149170:CDS | 45.0% | |
| AAAGCCTTCAAGAGAGTTGC+TGG | - | chr7_4:30336069-30336088 | None:intergenic | 45.0% | |
| AGCAACTCTCTTGAAGGCTT+TGG | + | chr7_4:30336068-30336087 | Msa1149170:CDS | 45.0% | |
| GCCTTGAAGAAAAGTTGTCG+TGG | + | chr7_4:30336093-30336112 | Msa1149170:CDS | 45.0% | |
| ! | GTTGTCGTGGATGTTTTTCG+TGG | + | chr7_4:30336106-30336125 | Msa1149170:CDS | 45.0% |
| ! | TCGTGGATGTTTTTCGTGGA+TGG | + | chr7_4:30336110-30336129 | Msa1149170:CDS | 45.0% |
| ACGTAGTACTCCAGCTATTG+TGG | + | chr7_4:30336255-30336274 | Msa1149170:CDS | 45.0% | |
| TGTCGTCTTTCCACAATAGC+TGG | - | chr7_4:30336268-30336287 | None:intergenic | 45.0% | |
| TGGCCCAATGATGACATTTG+AGG | - | chr7_4:30336325-30336344 | None:intergenic | 45.0% | |
| CAGATAATAAGAGGAACCGG+CGG | + | chr7_4:30336348-30336367 | Msa1149170:CDS | 45.0% | |
| AGATAATAAGAGGAACCGGC+GGG | + | chr7_4:30336349-30336368 | Msa1149170:CDS | 45.0% | |
| AAGAAGATGAGTGGGTGTCT+CGG | - | chr7_4:30336453-30336472 | None:intergenic | 45.0% | |
| TTAAGTCAAGCAAGACACGG+AGG | + | chr7_4:30337091-30337110 | Msa1149170:CDS | 45.0% | |
| GTACCTTCACATCTTCAGGA+TGG | - | chr7_4:30337296-30337315 | None:intergenic | 45.0% | |
| CTCAGTACCTTCACATCTTC+AGG | - | chr7_4:30337300-30337319 | None:intergenic | 45.0% | |
| ! | GGGATTTTGCTCAATTCCCT+TGG | + | chr7_4:30337327-30337346 | Msa1149170:CDS | 45.0% |
| AACTTCCTCATCACTCCCAA+GGG | - | chr7_4:30337346-30337365 | None:intergenic | 45.0% | |
| ACACTTACTTCAGCAGTCCT+TGG | + | chr7_4:30337490-30337509 | Msa1149170:CDS | 45.0% | |
| CACTTACTTCAGCAGTCCTT+GGG | + | chr7_4:30337491-30337510 | Msa1149170:CDS | 45.0% | |
| ATGAATGCAGTAATGGCCCA+AGG | - | chr7_4:30337510-30337529 | None:intergenic | 45.0% | |
| ! | GACATGGTTTGCGATTAACC+CGG | + | chr7_4:30337566-30337585 | Msa1149170:CDS | 45.0% |
| ACCACCTTTATTAGCAAGCC+GGG | - | chr7_4:30337587-30337606 | None:intergenic | 45.0% | |
| ACGACCAAAGATACAAAGGG+TGG | + | chr7_4:30335809-30335828 | Msa1149170:CDS | 45.0% | |
| CAAAGATACAAAGGGTGGCT+GGG | + | chr7_4:30335814-30335833 | Msa1149170:CDS | 45.0% | |
| AAAGCCTTCAAGAGAGTTGC+TGG | - | chr7_4:30336069-30336088 | None:intergenic | 45.0% | |
| AGCAACTCTCTTGAAGGCTT+TGG | + | chr7_4:30336068-30336087 | Msa1149170:CDS | 45.0% | |
| GCCTTGAAGAAAAGTTGTCG+TGG | + | chr7_4:30336093-30336112 | Msa1149170:CDS | 45.0% | |
| ! | GTTGTCGTGGATGTTTTTCG+TGG | + | chr7_4:30336106-30336125 | Msa1149170:CDS | 45.0% |
| ! | TCGTGGATGTTTTTCGTGGA+TGG | + | chr7_4:30336110-30336129 | Msa1149170:CDS | 45.0% |
| ACGTAGTACTCCAGCTATTG+TGG | + | chr7_4:30336255-30336274 | Msa1149170:CDS | 45.0% | |
| TGTCGTCTTTCCACAATAGC+TGG | - | chr7_4:30336268-30336287 | None:intergenic | 45.0% | |
| TGGCCCAATGATGACATTTG+AGG | - | chr7_4:30336325-30336344 | None:intergenic | 45.0% | |
| CAGATAATAAGAGGAACCGG+CGG | + | chr7_4:30336348-30336367 | Msa1149170:CDS | 45.0% | |
| AGATAATAAGAGGAACCGGC+GGG | + | chr7_4:30336349-30336368 | Msa1149170:CDS | 45.0% | |
| AAGAAGATGAGTGGGTGTCT+CGG | - | chr7_4:30336453-30336472 | None:intergenic | 45.0% | |
| TTAAGTCAAGCAAGACACGG+AGG | + | chr7_4:30337091-30337110 | Msa1149170:CDS | 45.0% | |
| GTACCTTCACATCTTCAGGA+TGG | - | chr7_4:30337296-30337315 | None:intergenic | 45.0% | |
| CTCAGTACCTTCACATCTTC+AGG | - | chr7_4:30337300-30337319 | None:intergenic | 45.0% | |
| ! | GGGATTTTGCTCAATTCCCT+TGG | + | chr7_4:30337327-30337346 | Msa1149170:CDS | 45.0% |
| AACTTCCTCATCACTCCCAA+GGG | - | chr7_4:30337346-30337365 | None:intergenic | 45.0% | |
| ACACTTACTTCAGCAGTCCT+TGG | + | chr7_4:30337490-30337509 | Msa1149170:CDS | 45.0% | |
| CACTTACTTCAGCAGTCCTT+GGG | + | chr7_4:30337491-30337510 | Msa1149170:CDS | 45.0% | |
| ATGAATGCAGTAATGGCCCA+AGG | - | chr7_4:30337510-30337529 | None:intergenic | 45.0% | |
| ! | GACATGGTTTGCGATTAACC+CGG | + | chr7_4:30337566-30337585 | Msa1149170:CDS | 45.0% |
| ACCACCTTTATTAGCAAGCC+GGG | - | chr7_4:30337587-30337606 | None:intergenic | 45.0% | |
| CCAGCCACCCTTTGTATCTT+TGG | - | chr7_4:30335816-30335835 | None:intergenic | 50.0% | |
| CCAAAGATACAAAGGGTGGC+TGG | + | chr7_4:30335813-30335832 | Msa1149170:CDS | 50.0% | |
| ! | TGTGTAGATCGCGTGGATTG+CGG | - | chr7_4:30335983-30336002 | None:intergenic | 50.0% |
| GTGCCCTGGTTCATCAAGTT+TGG | - | chr7_4:30336165-30336184 | None:intergenic | 50.0% | |
| GGGCCACACCAGATAATAAG+AGG | + | chr7_4:30336339-30336358 | Msa1149170:CDS | 50.0% | |
| !! | CGCCGGTTCCTCTTATTATC+TGG | - | chr7_4:30336350-30336369 | None:intergenic | 50.0% |
| GATAATAAGAGGAACCGGCG+GGG | + | chr7_4:30336350-30336369 | Msa1149170:CDS | 50.0% | |
| ATAATAAGAGGAACCGGCGG+GGG | + | chr7_4:30336351-30336370 | Msa1149170:CDS | 50.0% | |
| TTCTGCAGCGAACCATCCTT+CGG | - | chr7_4:30337136-30337155 | None:intergenic | 50.0% | |
| CGACCATCCTGAAGATGTGA+AGG | + | chr7_4:30337290-30337309 | Msa1149170:CDS | 50.0% | |
| CAATTCCCTTGGGAGTGATG+AGG | + | chr7_4:30337338-30337357 | Msa1149170:CDS | 50.0% | |
| CAACTTCCTCATCACTCCCA+AGG | - | chr7_4:30337347-30337366 | None:intergenic | 50.0% | |
| !! | ACCCGGCTTGCTAATAAAGG+TGG | + | chr7_4:30337583-30337602 | Msa1149170:exon | 50.0% |
| CCAGCCACCCTTTGTATCTT+TGG | - | chr7_4:30335816-30335835 | None:intergenic | 50.0% | |
| CCAAAGATACAAAGGGTGGC+TGG | + | chr7_4:30335813-30335832 | Msa1149170:CDS | 50.0% | |
| ! | TGTGTAGATCGCGTGGATTG+CGG | - | chr7_4:30335983-30336002 | None:intergenic | 50.0% |
| GTGCCCTGGTTCATCAAGTT+TGG | - | chr7_4:30336165-30336184 | None:intergenic | 50.0% | |
| GGGCCACACCAGATAATAAG+AGG | + | chr7_4:30336339-30336358 | Msa1149170:CDS | 50.0% | |
| !! | CGCCGGTTCCTCTTATTATC+TGG | - | chr7_4:30336350-30336369 | None:intergenic | 50.0% |
| GATAATAAGAGGAACCGGCG+GGG | + | chr7_4:30336350-30336369 | Msa1149170:CDS | 50.0% | |
| ATAATAAGAGGAACCGGCGG+GGG | + | chr7_4:30336351-30336370 | Msa1149170:CDS | 50.0% | |
| TTCTGCAGCGAACCATCCTT+CGG | - | chr7_4:30337136-30337155 | None:intergenic | 50.0% | |
| CGACCATCCTGAAGATGTGA+AGG | + | chr7_4:30337290-30337309 | Msa1149170:CDS | 50.0% | |
| CAATTCCCTTGGGAGTGATG+AGG | + | chr7_4:30337338-30337357 | Msa1149170:CDS | 50.0% | |
| CAACTTCCTCATCACTCCCA+AGG | - | chr7_4:30337347-30337366 | None:intergenic | 50.0% | |
| !! | ACCCGGCTTGCTAATAAAGG+TGG | + | chr7_4:30337583-30337602 | Msa1149170:exon | 50.0% |
| GATTGCGGCCTGTATTCTCG+AGG | - | chr7_4:30335968-30335987 | None:intergenic | 55.0% | |
| GTGTCGTCCACAACGATCTC+AGG | - | chr7_4:30337168-30337187 | None:intergenic | 55.0% | |
| GATTGCGGCCTGTATTCTCG+AGG | - | chr7_4:30335968-30335987 | None:intergenic | 55.0% | |
| GTGTCGTCCACAACGATCTC+AGG | - | chr7_4:30337168-30337187 | None:intergenic | 55.0% | |
| CTTGATTGCGTCGCCCCCGC+CGG | - | chr7_4:30336367-30336386 | None:intergenic | 70.0% | |
| CTTGATTGCGTCGCCCCCGC+CGG | - | chr7_4:30336367-30336386 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 30335612 | 30337748 | 30335612 | ID=Msa1149170;Name=Msa1149170 |
| chr7_4 | mRNA | 30335612 | 30337748 | 30335612 | ID=Msa1149170-mRNA-1;Parent=Msa1149170;Name=Msa1149170-mRNA-1;_AED=0.26;_eAED=0.26;_QI=123|1|1|1|0.5|0.33|3|66|465 |
| chr7_4 | exon | 30335612 | 30336514 | 30335612 | ID=Msa1149170-mRNA-1:exon:7357;Parent=Msa1149170-mRNA-1 |
| chr7_4 | exon | 30336979 | 30337628 | 30336979 | ID=Msa1149170-mRNA-1:exon:7358;Parent=Msa1149170-mRNA-1 |
| chr7_4 | exon | 30337715 | 30337748 | 30337715 | ID=Msa1149170-mRNA-1:exon:7359;Parent=Msa1149170-mRNA-1 |
| chr7_4 | five_prime_UTR | 30335612 | 30335734 | 30335612 | ID=Msa1149170-mRNA-1:five_prime_utr;Parent=Msa1149170-mRNA-1 |
| chr7_4 | CDS | 30335735 | 30336514 | 30335735 | ID=Msa1149170-mRNA-1:cds;Parent=Msa1149170-mRNA-1 |
| chr7_4 | CDS | 30336979 | 30337596 | 30336979 | ID=Msa1149170-mRNA-1:cds;Parent=Msa1149170-mRNA-1 |
| chr7_4 | three_prime_UTR | 30337597 | 30337628 | 30337597 | ID=Msa1149170-mRNA-1:three_prime_utr;Parent=Msa1149170-mRNA-1 |
| chr7_4 | three_prime_UTR | 30337715 | 30337748 | 30337715 | ID=Msa1149170-mRNA-1:three_prime_utr;Parent=Msa1149170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
