AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378720 MtrunA17_Chr3g0131731 90.625 416 4 2 3 383 49 464 0.0 762
Msa0378720 MtrunA17_Chr8g0385871 76.442 416 62 3 3 383 51 465 0.0 646
Msa0378720 MtrunA17_Chr7g0221551 70.290 414 89 3 3 383 48 460 0.0 605
Msa0378720 MtrunA17_Chr3g0094811 59.662 414 130 5 3 383 48 457 0.0 524
Msa0378720 MtrunA17_Chr2g0304931 57.421 411 138 5 3 380 56 462 6.37e-170 483
Msa0378720 MtrunA17_Chr3g0126051 43.914 419 192 7 3 382 51 465 2.26e-125 370
Msa0378720 MtrunA17_Chr3g0126031 44.231 416 189 8 3 380 46 456 3.94e-122 361
Msa0378720 MtrunA17_Chr5g0431301 44.125 417 192 7 3 380 47 461 1.38e-121 360
Msa0378720 MtrunA17_Chr1g0204191 45.763 413 158 8 3 380 109 490 1.47e-119 355
Msa0378720 MtrunA17_Chr7g0219051 42.755 421 195 9 3 383 53 467 1.83e-104 316
Msa0378720 MtrunA17_Chr3g0118851 43.890 401 188 11 3 376 96 486 1.11e-101 310
Msa0378720 MtrunA17_Chr4g0020241 41.687 403 204 9 3 380 91 487 7.66e-101 307
Msa0378720 MtrunA17_Chr3g0118841 44.000 400 188 12 3 376 97 486 1.44e-100 306
Msa0378720 MtrunA17_Chr3g0090331 41.872 406 201 11 3 380 92 490 1.27e-98 301
Msa0378720 MtrunA17_Chr1g0199991 38.350 412 214 9 3 380 51 456 2.51e-98 300
Msa0378720 MtrunA17_Chr3g0118881 41.162 413 198 13 3 380 96 498 9.98e-96 295
Msa0378720 MtrunA17_Chr4g0038311 38.333 420 211 10 3 381 52 464 2.33e-94 290
Msa0378720 MtrunA17_Chr1g0199971 38.741 413 211 12 3 380 51 456 3.80e-93 286
Msa0378720 MtrunA17_Chr2g0309521 37.681 414 217 10 3 382 58 464 6.94e-93 286
Msa0378720 MtrunA17_Chr2g0309541 38.072 415 216 10 3 382 57 465 1.53e-92 285
Msa0378720 MtrunA17_Chr1g0153881 40.842 404 203 10 3 382 108 499 1.69e-92 286
Msa0378720 MtrunA17_Chr2g0309511 38.257 413 216 9 3 382 58 464 2.67e-92 285
Msa0378720 MtrunA17_Chr4g0068841 39.860 429 199 12 3 380 57 477 6.95e-91 281
Msa0378720 MtrunA17_Chr1g0153941 38.084 428 208 10 3 382 96 514 5.93e-90 280
Msa0378720 MtrunA17_Chr4g0047861 38.084 428 206 9 3 382 71 487 1.09e-88 276
Msa0378720 MtrunA17_Chr3g0118831 40.247 405 174 11 3 380 96 459 2.04e-88 275
Msa0378720 MtrunA17_Chr2g0281621 38.626 422 210 10 3 382 53 467 5.58e-88 273
Msa0378720 MtrunA17_Chr3g0118891 40.150 401 170 12 3 376 96 453 3.26e-87 271
Msa0378720 MtrunA17_Chr2g0318911 36.650 412 218 11 3 379 59 462 1.19e-84 265
Msa0378720 MtrunA17_Chr1g0165811 54.260 223 97 3 3 225 48 265 3.18e-84 257
Msa0378720 MtrunA17_Chr3g0118861 38.835 412 173 13 3 376 94 464 1.33e-81 257
Msa0378720 MtrunA17_Chr2g0281641 36.667 390 196 10 37 382 7 389 3.28e-78 246
Msa0378720 MtrunA17_Chr4g0068861 36.126 382 187 12 3 335 103 476 7.68e-73 234
Msa0378720 MtrunA17_Chr1g0165821 61.635 159 54 2 223 381 28 179 2.61e-64 203
Msa0378720 MtrunA17_Chr1g0153931 56.970 165 65 3 3 162 94 257 5.19e-58 190
Msa0378720 MtrunA17_Chr7g0234051 31.938 454 226 16 3 379 48 495 3.01e-54 186
Msa0378720 MtrunA17_Chr4g0009701 29.227 414 232 13 14 379 70 470 6.22e-53 182
Msa0378720 MtrunA17_Chr8g0338461 31.223 458 223 17 3 379 49 495 1.84e-52 181
Msa0378720 MtrunA17_Chr4g0009661 29.398 415 230 14 14 379 70 470 2.12e-52 181
Msa0378720 MtrunA17_Chr4g0009651 28.502 414 235 12 14 379 70 470 2.42e-52 181
Msa0378720 MtrunA17_Chr4g0009671 30.193 414 228 14 14 379 35 435 3.60e-52 179
Msa0378720 MtrunA17_Chr7g0229651 44.059 202 78 4 162 328 1 202 1.02e-50 169
Msa0378720 MtrunA17_Chr4g0009681 28.810 420 240 10 7 379 60 467 1.47e-50 176
Msa0378720 MtrunA17_Chr2g0285371 29.070 430 240 12 3 379 52 469 2.68e-50 175
Msa0378720 MtrunA17_Chr3g0133011 28.604 437 232 11 5 379 78 496 5.00e-48 170
Msa0378720 MtrunA17_Chr4g0009711 28.019 414 237 13 14 379 70 470 5.33e-48 169
Msa0378720 MtrunA17_Chr7g0249431 30.921 456 233 16 3 379 46 498 6.64e-48 169
Msa0378720 MtrunA17_Chr4g0028271 30.198 404 241 12 3 376 101 493 1.45e-47 169
Msa0378720 MtrunA17_Chr1g0199171 30.073 409 235 14 3 376 94 486 1.92e-47 168
Msa0378720 MtrunA17_Chr2g0285351 27.945 433 242 14 3 379 51 469 4.34e-47 167
Msa0378720 MtrunA17_Chr2g0327401 28.993 407 245 14 3 377 104 498 4.46e-47 167
Msa0378720 MtrunA17_Chr2g0285381 27.896 423 247 10 3 379 55 465 4.51e-47 166
Msa0378720 MtrunA17_Chr1g0171411 29.902 408 238 14 3 376 87 480 1.28e-46 166
Msa0378720 MtrunA17_Chr4g0028241 32.090 402 220 17 14 377 104 490 3.20e-45 162
Msa0378720 MtrunA17_Chr4g0009641 28.010 407 222 11 14 379 70 446 6.55e-45 160
Msa0378720 MtrunA17_Chr4g0028281 29.512 410 238 15 3 377 99 492 1.64e-44 160
Msa0378720 MtrunA17_Chr4g0028261 30.488 410 235 17 3 377 122 516 3.39e-43 157
Msa0378720 MtrunA17_Chr7g0234041 44.390 205 94 7 3 197 45 239 3.34e-38 142
Msa0378720 MtrunA17_Chr2g0327381 25.727 447 253 16 3 377 98 537 3.81e-37 141
Msa0378720 MtrunA17_Chr2g0327371 25.400 437 238 16 11 377 95 513 4.92e-35 134
Msa0378720 MtrunA17_Chr4g0009721 26.764 411 199 12 14 379 66 419 2.80e-34 131
Msa0378720 MtrunA17_Chr3g0093971 24.396 414 262 11 3 374 45 449 4.33e-34 131
Msa0378720 MtrunA17_Chr5g0447441 26.633 398 256 14 3 374 45 432 8.67e-33 127
Msa0378720 MtrunA17_Chr4g0044051 27.136 398 254 14 3 374 49 436 1.34e-31 124
Msa0378720 MtrunA17_Chr1g0153921 32.159 227 121 7 178 382 3 218 2.09e-27 108
Msa0378720 MtrunA17_Chr7g0229631 68.254 63 20 0 8 70 55 117 3.43e-25 100
Msa0378720 MtrunA17_Chr4g0027731 25.761 427 254 12 3 375 37 454 1.22e-24 104
Msa0378720 MtrunA17_Chr2g0279371 34.839 155 91 4 10 157 38 189 1.55e-24 99.4
Msa0378720 MtrunA17_Chr7g0264221 48.889 90 44 2 295 383 13 101 9.95e-21 86.7
Msa0378720 MtrunA17_Chr7g0229611 67.273 55 17 1 3 57 43 96 2.56e-20 85.1
Msa0378720 MtrunA17_Chr7g0229621 65.455 55 18 1 3 57 43 96 5.68e-19 81.6
Msa0378720 MtrunA17_Chr2g0320571 26.824 425 239 16 3 363 37 453 1.12e-16 81.3
Msa0378720 MtrunA17_Chr4g0006541 43.750 64 33 1 139 202 7 67 9.16e-13 64.3
Msa0378720 MtrunA17_Chr7g0229641 61.765 34 13 0 114 147 45 78 5.28e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378720 AT1G28110.1 73.913 414 74 3 3 383 49 461 0.0 632
Msa0378720 AT1G28110.2 73.913 414 74 3 3 383 49 461 0.0 632
Msa0378720 AT2G33530.1 70.673 416 86 3 3 383 51 465 0.0 613
Msa0378720 AT1G43780.1 47.494 419 178 7 3 381 55 471 6.10e-129 379
Msa0378720 AT2G12480.4 48.082 391 184 7 3 380 49 433 5.05e-126 370
Msa0378720 AT2G12480.1 47.826 391 183 7 3 380 49 431 7.17e-125 367
Msa0378720 AT2G12480.3 46.472 411 185 8 3 380 49 457 8.29e-125 368
Msa0378720 AT5G42240.1 46.523 417 182 8 3 380 50 464 1.50e-123 365
Msa0378720 AT2G12480.2 47.704 392 183 8 3 380 49 432 5.25e-123 363
Msa0378720 AT5G42230.1 45.084 417 188 7 3 380 46 460 7.92e-121 358
Msa0378720 AT5G42230.2 45.084 417 188 7 3 380 46 460 7.92e-121 358
Msa0378720 AT2G24010.1 41.304 414 203 9 3 383 48 454 1.02e-103 314
Msa0378720 AT4G30610.1 40.000 425 202 10 3 383 50 465 1.40e-102 311
Msa0378720 AT3G02110.1 41.176 425 199 10 3 382 55 473 1.78e-100 306
Msa0378720 AT3G07990.1 40.678 413 203 11 3 380 52 457 1.64e-99 303
Msa0378720 AT2G35780.1 39.806 412 206 11 3 380 48 451 4.15e-99 302
Msa0378720 AT2G24000.1 40.662 423 203 12 3 383 48 464 6.05e-99 302
Msa0378720 AT2G24010.2 39.627 429 204 10 3 383 48 469 2.85e-98 300
Msa0378720 AT2G05850.1 38.107 412 216 9 3 382 82 486 7.00e-98 300
Msa0378720 AT2G35770.1 38.480 408 216 9 3 380 56 458 1.07e-95 293
Msa0378720 AT3G17180.1 39.858 424 204 8 3 380 57 475 3.57e-95 293
Msa0378720 AT3G63470.1 39.364 409 211 8 3 382 99 499 9.41e-95 292
Msa0378720 AT1G61130.1 39.573 422 201 11 3 380 49 460 1.69e-94 290
Msa0378720 AT5G08260.1 38.663 419 204 8 9 380 64 476 6.72e-94 289
Msa0378720 AT2G24010.3 37.665 454 203 12 3 383 19 465 4.96e-93 286
Msa0378720 AT5G23210.1 38.215 437 201 13 3 380 69 495 1.13e-90 281
Msa0378720 AT3G52000.1 39.512 410 208 13 3 382 82 481 3.03e-90 280
Msa0378720 AT4G30810.1 36.930 417 212 12 3 379 56 461 1.97e-89 278
Msa0378720 AT3G52010.1 38.537 410 216 11 3 382 83 486 2.99e-89 278
Msa0378720 AT4G15100.1 37.793 426 209 10 3 379 62 480 8.24e-88 274
Msa0378720 AT1G11080.2 38.462 429 206 11 3 380 68 489 5.50e-87 272
Msa0378720 AT1G11080.1 38.462 429 206 11 3 380 68 489 5.52e-87 272
Msa0378720 AT3G52020.1 36.919 409 220 10 3 380 97 498 1.71e-83 263
Msa0378720 AT3G17180.2 37.922 385 188 8 3 341 57 436 1.97e-78 248
Msa0378720 AT5G23210.5 36.946 406 187 13 34 380 5 400 6.25e-77 243
Msa0378720 AT5G23210.3 37.500 392 177 12 3 335 69 451 8.07e-77 244
Msa0378720 AT5G23210.2 36.816 402 185 13 38 380 8 399 9.81e-76 240
Msa0378720 AT2G24010.4 37.059 340 164 8 3 294 19 356 9.53e-66 213
Msa0378720 AT2G22990.1 31.450 407 235 11 3 379 41 433 8.92e-64 210
Msa0378720 AT5G23210.4 35.854 357 161 12 38 335 8 355 6.41e-62 203
Msa0378720 AT1G73300.1 30.424 401 245 10 3 379 51 441 4.79e-59 198
Msa0378720 AT1G73300.2 30.424 401 245 10 3 379 51 441 4.79e-59 198
Msa0378720 AT2G22920.2 30.882 408 236 13 3 379 43 435 2.68e-58 196
Msa0378720 AT3G25420.1 32.599 454 222 15 3 379 48 494 3.70e-58 197
Msa0378720 AT2G23000.1 30.562 409 238 10 3 379 43 437 5.52e-58 195
Msa0378720 AT2G23000.2 30.562 409 238 10 3 379 43 437 5.52e-58 195
Msa0378720 AT1G73280.1 29.777 403 245 12 3 379 51 441 1.37e-57 194
Msa0378720 AT3G10450.2 31.204 407 236 13 2 379 3 394 1.60e-57 192
Msa0378720 AT2G22990.5 30.467 407 230 12 3 379 41 424 2.23e-57 193
Msa0378720 AT2G22980.1 30.348 402 240 12 3 379 44 430 2.52e-57 193
Msa0378720 AT1G73290.1 31.762 403 235 14 3 379 50 438 3.40e-57 193
Msa0378720 AT2G22970.1 30.713 407 236 12 3 379 43 433 8.36e-57 192
Msa0378720 AT2G22990.4 31.496 381 218 10 3 353 41 408 1.89e-56 191
Msa0378720 AT3G12203.3 31.514 403 237 13 3 379 27 416 1.97e-56 190
Msa0378720 AT2G22990.3 31.414 382 219 10 3 354 41 409 2.68e-56 191
Msa0378720 AT3G10450.1 31.034 406 236 13 3 379 47 437 3.02e-56 191
Msa0378720 AT3G12203.1 31.514 403 237 13 3 379 48 437 3.15e-56 191
Msa0378720 AT3G12240.1 31.281 406 235 12 3 379 46 436 6.05e-56 190
Msa0378720 AT5G36180.1 30.175 401 246 10 3 379 51 441 6.92e-56 189
Msa0378720 AT4G12910.1 31.250 448 228 13 3 376 53 494 7.09e-56 191
Msa0378720 AT3G12220.2 31.144 411 233 13 1 379 13 405 8.24e-56 188
Msa0378720 AT3G12203.2 31.888 392 228 13 14 379 1 379 9.06e-56 187
Msa0378720 AT2G23010.1 29.684 411 239 12 3 379 43 437 4.12e-55 187
Msa0378720 AT3G12230.1 30.617 405 239 12 3 379 45 435 5.82e-55 187
Msa0378720 AT2G23010.2 29.440 411 240 12 3 379 43 437 1.86e-54 186
Msa0378720 AT1G73310.1 30.100 402 245 11 3 379 51 441 3.03e-54 185
Msa0378720 AT3G12220.1 30.976 410 231 13 3 379 45 435 3.24e-54 185
Msa0378720 AT1G33540.2 28.972 428 243 12 3 379 4 421 4.36e-53 182
Msa0378720 AT1G33540.1 28.972 428 243 12 3 379 47 464 8.70e-53 182
Msa0378720 AT1G73270.2 29.032 403 248 12 3 379 51 441 4.40e-52 179
Msa0378720 AT1G73270.1 29.032 403 248 12 3 379 51 441 7.37e-52 179
Msa0378720 AT2G22980.2 30.239 377 224 11 3 354 44 406 1.58e-50 175
Msa0378720 AT2G22980.4 29.870 385 231 11 3 362 44 414 1.91e-50 175
Msa0378720 AT5G09640.1 29.861 432 237 13 3 379 45 465 6.07e-50 174
Msa0378720 AT3G10450.3 30.628 382 222 12 2 354 3 370 1.03e-49 172
Msa0378720 AT3G45010.1 30.392 408 238 15 3 377 105 499 2.18e-49 174
Msa0378720 AT2G22970.4 30.366 382 221 11 3 354 43 409 2.40e-49 172
Msa0378720 AT2G22970.3 29.851 402 236 12 3 374 43 428 6.80e-49 171
Msa0378720 AT3G12220.3 31.458 391 202 14 3 379 45 383 1.08e-48 169
Msa0378720 AT3G10450.4 30.446 381 222 12 3 354 47 413 1.69e-48 169
Msa0378720 AT5G22980.1 30.000 410 235 16 3 377 102 494 9.93e-48 169
Msa0378720 AT2G22920.1 30.518 367 210 12 3 338 43 395 2.70e-46 164
Msa0378720 AT4G12910.2 43.836 219 110 6 3 211 53 268 9.30e-46 163
Msa0378720 AT2G24000.2 32.331 399 207 17 3 383 48 401 1.24e-44 159
Msa0378720 AT1G73290.3 30.939 362 211 13 3 338 50 398 3.03e-44 158
Msa0378720 AT3G10410.1 30.392 408 232 16 3 375 103 493 1.08e-43 159
Msa0378720 AT2G22990.6 29.305 331 198 9 72 379 2 319 2.84e-43 153
Msa0378720 AT1G73310.2 29.041 365 224 10 3 342 51 405 4.92e-43 155
Msa0378720 AT2G22990.2 29.003 331 199 9 72 379 2 319 1.14e-42 152
Msa0378720 AT3G56540.1 53.623 138 60 3 3 138 97 232 5.15e-42 148
Msa0378720 AT1G73280.4 26.923 338 217 9 61 379 13 339 7.39e-41 147
Msa0378720 AT5G36180.5 27.679 336 217 7 61 379 13 339 2.82e-39 143
Msa0378720 AT5G36180.3 27.679 336 217 7 61 379 13 339 2.82e-39 143
Msa0378720 AT1G73290.2 34.940 249 147 9 3 241 50 293 1.87e-38 140
Msa0378720 AT1G73280.3 26.769 325 208 9 74 379 1 314 2.26e-37 137
Msa0378720 AT2G22920.4 32.394 284 154 9 3 259 43 315 2.26e-37 137
Msa0378720 AT2G22980.3 31.930 285 164 9 3 263 44 322 3.82e-37 138
Msa0378720 AT1G73280.2 29.897 291 177 8 3 269 51 338 9.61e-37 137
Msa0378720 AT2G22970.2 34.188 234 135 6 3 224 43 269 1.96e-35 132
Msa0378720 AT1G15000.1 27.681 401 253 15 3 379 39 426 1.06e-31 125
Msa0378720 AT5G36180.2 26.688 311 203 6 61 354 13 315 2.13e-31 121
Msa0378720 AT2G22980.5 27.243 301 188 9 72 354 2 289 5.53e-30 117
Msa0378720 AT2G27920.1 28.640 419 230 18 3 363 38 445 8.94e-29 117
Msa0378720 AT1G73310.3 26.333 300 194 7 61 342 13 303 5.63e-27 109
Msa0378720 AT5G36180.4 26.190 294 192 6 61 337 13 298 2.88e-25 105
Msa0378720 AT2G22920.3 27.444 266 157 9 138 379 3 256 1.54e-23 99.0
Msa0378720 AT5G22960.1 34.591 159 79 6 3 158 38 174 4.90e-22 92.8
Msa0378720 AT2G27920.2 27.559 381 209 17 39 363 4 373 1.05e-20 93.2
Msa0378720 AT2G22960.1 28.369 141 94 3 239 379 51 184 3.16e-16 76.6

Find 85 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAAACCTCTTGTTCTT+TGG 0.209048 3_1:-79551355 Msa0378720:CDS
TACTGATTATTAGATATTAA+AGG 0.220981 3_1:+79548138 None:intergenic
AGAGGCAAACATGCTTTATT+TGG 0.233598 3_1:-79551133 Msa0378720:CDS
CGTGCTATTCAAATCATTCT+TGG 0.238356 3_1:-79548254 Msa0378720:CDS
GGTGGGTGGACTCAAGTTTA+TGG 0.246369 3_1:-79548349 Msa0378720:CDS
AACAAGATATTCAATCTTAA+AGG 0.249651 3_1:-79550478 Msa0378720:CDS
ACACTTCCTACCTGTAAATT+AGG 0.255971 3_1:+79549332 None:intergenic
AACAGAGATTTGTTTCTAAC+TGG 0.261748 3_1:-79550646 Msa0378720:CDS
CAACAGTTCCTTACAGAGTA+TGG 0.262408 3_1:-79549119 Msa0378720:CDS
AATAGCACGAGTGATCTTTC+AGG 0.286784 3_1:+79548268 None:intergenic
ATACAAGGTCATTACTCTTT+AGG 0.287449 3_1:-79547877 Msa0378720:three_prime_UTR
CCTCTTGTTCTTTGGCTCAA+TGG 0.297305 3_1:-79551347 Msa0378720:CDS
CCTCTTTGTTCAAAGGTTAT+GGG 0.297500 3_1:-79550211 Msa0378720:intron
GAGTTAAGGTCCTAATTTAC+AGG 0.298396 3_1:-79549342 Msa0378720:intron
ATTCAAGGGCTGAATTCTTT+TGG 0.305209 3_1:-79550330 Msa0378720:CDS
GGACCTGGTTGTTCTTCTCT+TGG 0.328407 3_1:-79551323 Msa0378720:CDS
GTAGGTGCATTCTCAGAAAA+TGG 0.330444 3_1:-79551299 Msa0378720:CDS
AATGAACATAGTTGGAATAA+AGG 0.338350 3_1:-79551242 Msa0378720:intron
TTAATAAGAAATTCACCATT+TGG 0.361078 3_1:+79551266 None:intergenic
AATTCACCATTTGGTCTAAA+GGG 0.361681 3_1:+79551275 None:intergenic
CAAAAGGTTGAAAACCAAAA+AGG 0.369573 3_1:+79548044 None:intergenic
CTTTGGCTCAATGGAGGACC+TGG 0.390446 3_1:-79551338 Msa0378720:CDS
TATGTCTTTAAATCCATTGT+TGG 0.393903 3_1:+79547901 None:intergenic
TCAGTTGCATATTCTAGAAC+TGG 0.396182 3_1:+79550358 None:intergenic
ACTTGTTGAACCAACGTTCC+AGG 0.404293 3_1:+79550683 None:intergenic
AAATTCACCATTTGGTCTAA+AGG 0.415048 3_1:+79551274 None:intergenic
GCACTTCATGCAAAACTTGT+TGG 0.416149 3_1:-79549786 Msa0378720:CDS
AAGGGACAATCTTGTATTCC+TGG 0.417025 3_1:-79550701 Msa0378720:CDS
AAATCTCTGTTTCTATATTG+AGG 0.417674 3_1:+79550658 None:intergenic
TTTATCAATGATCCAACAAC+AGG 0.423621 3_1:+79549370 None:intergenic
AGGTTACAAACTACTTAAAC+AGG 0.431883 3_1:-79549824 Msa0378720:CDS
CTAAATAGTAAACACACAAA+AGG 0.432283 3_1:+79548191 None:intergenic
CCTTACAGAGTATGGTTTGA+AGG 0.432469 3_1:-79549111 Msa0378720:CDS
CTCTGTGCTGTCACAGTCCA+AGG 0.436842 3_1:-79550122 Msa0378720:intron
ATTGATAAAAGCTGGAGTTA+AGG 0.446975 3_1:-79549356 Msa0378720:CDS
GGTTGTTCTTCTCTTGGAGT+AGG 0.448812 3_1:-79551317 Msa0378720:CDS
GTGCCAACACTTCCTGTTGT+TGG 0.450313 3_1:-79549382 Msa0378720:CDS
TAAGAAAATCCAACTCCAAC+TGG 0.455371 3_1:+79551105 None:intergenic
TAAAGAAACTAGTAGATTTG+TGG 0.457756 3_1:-79550179 Msa0378720:CDS
ATGCAACTGATTTCAATTCA+AGG 0.458582 3_1:-79550345 Msa0378720:CDS
AGGGTGTGTCAGAAAACTTC+AGG 0.465152 3_1:+79548217 None:intergenic
CTCTCATTTGCCACAGTGAG+AGG 0.471001 3_1:-79548319 Msa0378720:CDS
AATGGACCCTTTAGACCAAA+TGG 0.472157 3_1:-79551281 Msa0378720:CDS
TTGTTCAAAGGTTATGGGAT+TGG 0.472351 3_1:-79550206 Msa0378720:intron
ATCATAAGCTTTGCAAGTTG+AGG 0.475887 3_1:+79550517 None:intergenic
AGTATGGTTTGAAGGCCAAC+AGG 0.477560 3_1:-79549103 Msa0378720:intron
TTTAATGAAACTTAGGTTGG+TGG 0.479581 3_1:-79548367 Msa0378720:intron
CCTTCAAACCATACTCTGTA+AGG 0.483426 3_1:+79549111 None:intergenic
GGACTATGATGTGCTTAACT+TGG 0.489157 3_1:-79549407 Msa0378720:CDS
GATCTTTCAGGCTGTGAGAA+AGG 0.497374 3_1:+79548280 None:intergenic
TTGGAGACACCAGTTGGAGT+TGG 0.500117 3_1:-79551114 Msa0378720:CDS
ATCTTGTATTCCTGGAACGT+TGG 0.501196 3_1:-79550693 Msa0378720:CDS
CTTGTTCTTTGGCTCAATGG+AGG 0.503534 3_1:-79551344 Msa0378720:CDS
CTAACTGGGGAAAGTTATGC+AGG 0.506489 3_1:-79550631 Msa0378720:intron
GACTCAGTGATTCCACTGAC+TGG 0.508042 3_1:-79549189 Msa0378720:CDS
TGCAACTGATTTCAATTCAA+GGG 0.511117 3_1:-79550344 Msa0378720:CDS
TCAAATCATTCTTGGAAGGA+AGG 0.513553 3_1:-79548246 Msa0378720:CDS
TAAATAGTAAACACACAAAA+GGG 0.515682 3_1:+79548192 None:intergenic
TTAATGAAACTTAGGTTGGT+GGG 0.518560 3_1:-79548366 Msa0378720:intron
ACAGAGATTTGTTTCTAACT+GGG 0.518718 3_1:-79550645 Msa0378720:CDS
CTTTATTTGGAGACACCAGT+TGG 0.520213 3_1:-79551120 Msa0378720:CDS
GTTGGATCATTGATAAAAGC+TGG 0.524225 3_1:-79549364 Msa0378720:CDS
GTTGTTGAAGAGAATGCAAG+TGG 0.534035 3_1:-79547946 Msa0378720:three_prime_UTR
ACAGTGAATGACGAGGAAAC+AGG 0.535990 3_1:-79551054 Msa0378720:intron
TGTCAGAAAACTTCAGGTAA+AGG 0.539128 3_1:+79548223 None:intergenic
GTAAACACACAAAAGGGAAA+GGG 0.559233 3_1:+79548198 None:intergenic
TAATATCTAATAATCAGTAA+AGG 0.565877 3_1:-79548134 Msa0378720:three_prime_UTR
CAGAGATTTGTTTCTAACTG+GGG 0.566111 3_1:-79550644 Msa0378720:CDS
AAGCTTCTGCTTCCAGTCAG+TGG 0.568377 3_1:+79549177 None:intergenic
GATCCAACAACAGGAAGTGT+TGG 0.570777 3_1:+79549379 None:intergenic
AGTAAACACACAAAAGGGAA+AGG 0.571309 3_1:+79548197 None:intergenic
CCATTGAGCCAAAGAACAAG+AGG 0.575023 3_1:+79551347 None:intergenic
AACTTGTTGGAGTTCGCAAG+TGG 0.581245 3_1:-79549773 Msa0378720:CDS
CTATTCAAATCATTCTTGGA+AGG 0.581750 3_1:-79548250 Msa0378720:CDS
AGTTAAGCACATCATAGTCC+AGG 0.589846 3_1:+79549410 None:intergenic
AACTCAAACTCGTTGCAGAT+CGG 0.593466 3_1:-79547837 Msa0378720:three_prime_UTR
ATGAAACTTAGGTTGGTGGG+TGG 0.608032 3_1:-79548363 Msa0378720:intron
TAATAATCAGTAAAGGAATG+TGG 0.639265 3_1:-79548127 Msa0378720:three_prime_UTR
ACTTGTTGGAGTTCGCAAGT+GGG 0.647506 3_1:-79549772 Msa0378720:CDS
GATTTAAAGACATAAATACA+AGG 0.658495 3_1:-79547892 Msa0378720:three_prime_UTR
AAACAGGAGAGATGTGCAAG+AGG 0.664395 3_1:-79549808 Msa0378720:CDS
ACTCCAAGAGAAGAACAACC+AGG 0.669050 3_1:+79551320 None:intergenic
ATGTGCAGCACCTCTCACTG+TGG 0.718656 3_1:+79548309 None:intergenic
TACAACAACAGTGAATGACG+AGG 0.719486 3_1:-79551061 Msa0378720:CDS
CTTGGACTGTGACAGCACAG+AGG 0.766016 3_1:+79550123 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAAGTTATATTGTAT+TGG - chr3_1:79548154-79548173 Msa0378720:three_prime_UTR 10.0%
!!! TACAATTTTAACTTTTTTAA+TGG + chr3_1:79549717-79549736 None:intergenic 10.0%
!!! AAATAACTTGTAATTTTATT+AGG - chr3_1:79551936-79551955 Msa0378720:intron 10.0%
!!! TATAAATTTTAATGAAACTT+AGG - chr3_1:79553116-79553135 Msa0378720:intron 10.0%
!!! TAATACAAAATAAAAGTGTA+GGG + chr3_1:79547862-79547881 None:intergenic 15.0%
!!! ATAATACAAAATAAAAGTGT+AGG + chr3_1:79547863-79547882 None:intergenic 15.0%
!! TAGACAACATATATTTATTT+GGG - chr3_1:79547935-79547954 Msa0378720:three_prime_UTR 15.0%
!! AAAAGTTGAATATATTGTAT+TGG - chr3_1:79548113-79548132 Msa0378720:three_prime_UTR 15.0%
!! AAAGTTGAATATATTGTATT+GGG - chr3_1:79548114-79548133 Msa0378720:three_prime_UTR 15.0%
!!! TAATTAACCCTTTAAAAAAT+TGG + chr3_1:79548350-79548369 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr3_1:79548827-79548846 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr3_1:79548605-79548624 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr3_1:79548737-79548756 Msa0378720:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr3_1:79548827-79548846 Msa0378720:intron 15.0%
!!! AATTTTTAAGAGTTTGTTAT+TGG + chr3_1:79549028-79549047 None:intergenic 15.0%
!! AAGTAAAAATTGAAATATTC+AGG - chr3_1:79549214-79549233 Msa0378720:intron 15.0%
!! TATGAAAAGAAATTAGATAT+TGG + chr3_1:79549431-79549450 None:intergenic 15.0%
!! TTATTAAAAATGAACATAGT+TGG - chr3_1:79550240-79550259 Msa0378720:intron 15.0%
!!! TCATTATTATTGAATCTTTT+TGG - chr3_1:79550462-79550481 Msa0378720:intron 15.0%
!!! TTATGTTTTTATACTTTCTT+AGG - chr3_1:79550552-79550571 Msa0378720:intron 15.0%
!! AAATTCTGTCAAATTATTAT+TGG + chr3_1:79551504-79551523 None:intergenic 15.0%
!! TAATATATATATTTACCTGT+TGG + chr3_1:79552405-79552424 None:intergenic 15.0%
!!! TACTGATTATTAGATATTAA+AGG + chr3_1:79553355-79553374 None:intergenic 15.0%
!! TAATATCTAATAATCAGTAA+AGG - chr3_1:79553356-79553375 Msa0378720:intron 15.0%
!!! AATCATACGATTTTTAGTAA+TGG - chr3_1:79547886-79547905 Msa0378720:three_prime_UTR 20.0%
!!! ATCATACGATTTTTAGTAAT+GGG - chr3_1:79547887-79547906 Msa0378720:three_prime_UTR 20.0%
!! GTAGACAACATATATTTATT+TGG - chr3_1:79547934-79547953 Msa0378720:three_prime_UTR 20.0%
!!! CAAAATGTAATTTCTTTTGT+CGG + chr3_1:79548025-79548044 None:intergenic 20.0%
!! ACGAAACATGTATAAATAAA+AGG - chr3_1:79548090-79548109 Msa0378720:three_prime_UTR 20.0%
!!! ATGTTGTACCAATTTTTTAA+AGG - chr3_1:79548339-79548358 Msa0378720:CDS 20.0%
!!! TGTTGTACCAATTTTTTAAA+GGG - chr3_1:79548340-79548359 Msa0378720:CDS 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr3_1:79548475-79548494 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr3_1:79548476-79548495 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr3_1:79548570-79548589 None:intergenic 20.0%
!! TGAATATTTCAATTCAGATT+TGG + chr3_1:79549173-79549192 None:intergenic 20.0%
!! AAATCTGAATTGAAATATTC+AGG - chr3_1:79549172-79549191 Msa0378720:CDS 20.0%
!! TTTCACATGAAAATTACATA+TGG + chr3_1:79549296-79549315 None:intergenic 20.0%
!!! TCCAATTTTCATATATGAAA+GGG + chr3_1:79549373-79549392 None:intergenic 20.0%
!!! TTCCAATTTTCATATATGAA+AGG + chr3_1:79549374-79549393 None:intergenic 20.0%
!!! TTTGAAATCATGATAGTTTA+AGG + chr3_1:79549503-79549522 None:intergenic 20.0%
!!! TTATAATTCTTCAAGTTGAA+CGG + chr3_1:79549582-79549601 None:intergenic 20.0%
!!! ATTTTAACTTTTTTAATGGC+AGG + chr3_1:79549713-79549732 None:intergenic 20.0%
!! TTAATAAGAAATTCACCATT+TGG + chr3_1:79550227-79550246 None:intergenic 20.0%
!!! ACATATTTTGTAATCTGAAA+CGG - chr3_1:79550745-79550764 Msa0378720:intron 20.0%
!!! TTTTTTGAATTGTTAAGCAA+GGG - chr3_1:79550771-79550790 Msa0378720:intron 20.0%
!! AAAATTTATGCATGTATTTC+AGG - chr3_1:79550940-79550959 Msa0378720:intron 20.0%
!! AACAAGATATTCAATCTTAA+AGG - chr3_1:79551012-79551031 Msa0378720:intron 20.0%
!! CTTAGAATAAAAGTTAAATG+TGG - chr3_1:79551806-79551825 Msa0378720:intron 20.0%
!! AGAATAAATCAAAAAACAGA+AGG + chr3_1:79552193-79552212 None:intergenic 20.0%
!!! AATTTTAATGAAACTTAGGT+TGG - chr3_1:79553120-79553139 Msa0378720:intron 20.0%
!! TAAATAGTAAACACACAAAA+GGG + chr3_1:79553301-79553320 None:intergenic 20.0%
!! GATTTAAAGACATAAATACA+AGG - chr3_1:79553598-79553617 Msa0378720:intron 20.0%
! GTAAATAAAATCTGCCAAAT+GGG + chr3_1:79547832-79547851 None:intergenic 25.0%
!! AATAAAAGTGTAGGGTAAAA+TGG + chr3_1:79547854-79547873 None:intergenic 25.0%
! CTACACTACATAAAATTCTT+GGG + chr3_1:79547918-79547937 None:intergenic 25.0%
! TCTACACTACATAAAATTCT+TGG + chr3_1:79547919-79547938 None:intergenic 25.0%
! TGTTTCGTGAAAAATCAAAT+TGG + chr3_1:79548078-79548097 None:intergenic 25.0%
! CTATGAAAGATGATCTAAAA+TGG - chr3_1:79548212-79548231 Msa0378720:exon 25.0%
!! GTTTTACATACATTTGTGAA+AGG - chr3_1:79548247-79548266 Msa0378720:CDS 25.0%
!! TGATCTCATAATGTTTTGTA+TGG - chr3_1:79548270-79548289 Msa0378720:CDS 25.0%
! AGGGCAAAAAAACAAAATTA+GGG + chr3_1:79548442-79548461 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr3_1:79548765-79548784 Msa0378720:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr3_1:79548766-79548785 Msa0378720:intron 25.0%
!!! TTTTGCGCTTTTTGAAAAAA+GGG + chr3_1:79548901-79548920 None:intergenic 25.0%
!!! TTTTTGCGCTTTTTGAAAAA+AGG + chr3_1:79548902-79548921 None:intergenic 25.0%
!! TACTTTTGCAAAGTCAAATA+TGG - chr3_1:79548977-79548996 Msa0378720:intron 25.0%
!! ATTTCAATTCAGATTTGGTT+AGG + chr3_1:79549168-79549187 None:intergenic 25.0%
!!! GGAAAACCATTTTTAATTGA+AGG + chr3_1:79549275-79549294 None:intergenic 25.0%
! ACCCTTTCATATATGAAAAT+TGG - chr3_1:79549369-79549388 Msa0378720:CDS 25.0%
! TGAGATTTGCATTGAATTTA+GGG + chr3_1:79549404-79549423 None:intergenic 25.0%
!! AGAGAAACATAACACTTTTA+AGG + chr3_1:79549970-79549989 None:intergenic 25.0%
! AATGAACATAGTTGGAATAA+AGG - chr3_1:79550248-79550267 Msa0378720:intron 25.0%
!! GTTGGATTTTCTTATGTTAA+AGG - chr3_1:79550394-79550413 Msa0378720:intron 25.0%
!! CTTTTAAATCCTACTTCTAT+TGG - chr3_1:79550514-79550533 Msa0378720:CDS 25.0%
!!! CTTTTTTGAATTGTTAAGCA+AGG - chr3_1:79550770-79550789 Msa0378720:intron 25.0%
!!! AAATCTCTGTTTCTATATTG+AGG + chr3_1:79550835-79550854 None:intergenic 25.0%
!!! CATGTTTTAAAAAGCAGTAA+AGG + chr3_1:79550896-79550915 None:intergenic 25.0%
! TAAAGAAACTAGTAGATTTG+TGG - chr3_1:79551311-79551330 Msa0378720:CDS 25.0%
! AAAGTTAAATGTGGTTTATG+CGG - chr3_1:79551815-79551834 Msa0378720:intron 25.0%
!! AGAAATCACTGTCAAAATTT+TGG - chr3_1:79552450-79552469 Msa0378720:intron 25.0%
! ACTCTTTGGATCTAATAAAA+GGG - chr3_1:79552829-79552848 Msa0378720:intron 25.0%
! TTATAATCTAAACATAGCCT+CGG - chr3_1:79552883-79552902 Msa0378720:intron 25.0%
! CTAAATAGTAAACACACAAA+AGG + chr3_1:79553302-79553321 None:intergenic 25.0%
! TAATAATCAGTAAAGGAATG+TGG - chr3_1:79553363-79553382 Msa0378720:intron 25.0%
!!! TATTACTTTTTTGGCCTTTT+TGG - chr3_1:79553432-79553451 Msa0378720:intron 25.0%
!!! GATTCTTGTTCTAAGTTTTT+GGG - chr3_1:79553566-79553585 Msa0378720:intron 25.0%
! TATGTCTTTAAATCCATTGT+TGG + chr3_1:79553592-79553611 None:intergenic 25.0%
GGTAAATAAAATCTGCCAAA+TGG + chr3_1:79547833-79547852 None:intergenic 30.0%
! CACGATTGTGAAAGAATTTT+AGG - chr3_1:79547974-79547993 Msa0378720:three_prime_UTR 30.0%
! GATTGTGAAAGAATTTTAGG+TGG - chr3_1:79547977-79547996 Msa0378720:three_prime_UTR 30.0%
! AAAGATGATCTAAAATGGTC+TGG - chr3_1:79548217-79548236 Msa0378720:exon 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr3_1:79548857-79548876 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr3_1:79548842-79548861 None:intergenic 30.0%
CAGGGCAAAAAAACAAAATT+AGG + chr3_1:79548443-79548462 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr3_1:79548703-79548722 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr3_1:79548842-79548861 Msa0378720:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr3_1:79548857-79548876 Msa0378720:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr3_1:79548858-79548877 Msa0378720:intron 30.0%
! ATAGTGCTAGTACTCATTTT+GGG - chr3_1:79548943-79548962 Msa0378720:intron 30.0%
! AGAAGAGTATACCTTCTAAA+CGG + chr3_1:79549248-79549267 None:intergenic 30.0%
CTGAGTCCTTCAATTAAAAA+TGG - chr3_1:79549266-79549285 Msa0378720:intron 30.0%
AGATTTGCATTGAATTTAGG+GGG + chr3_1:79549402-79549421 None:intergenic 30.0%
GAGATTTGCATTGAATTTAG+GGG + chr3_1:79549403-79549422 None:intergenic 30.0%
GTGAGATTTGCATTGAATTT+AGG + chr3_1:79549405-79549424 None:intergenic 30.0%
TCTCTTTCAACAACAATTTC+AGG - chr3_1:79549687-79549706 Msa0378720:intron 30.0%
ATATCCTGAGAATTGTTGAA+AGG + chr3_1:79550048-79550067 None:intergenic 30.0%
AATTCACCATTTGGTCTAAA+GGG + chr3_1:79550218-79550237 None:intergenic 30.0%
AAATTCACCATTTGGTCTAA+AGG + chr3_1:79550219-79550238 None:intergenic 30.0%
!!! AGTTATTTTTTGTGTTGCAG+AGG - chr3_1:79550339-79550358 Msa0378720:CDS 30.0%
!!! CTACTTTTTCCAATAGAAGT+AGG + chr3_1:79550526-79550545 None:intergenic 30.0%
! TGATATCAGTATGATGATGA+TGG - chr3_1:79550713-79550732 Msa0378720:intron 30.0%
!! AACAGAGATTTGTTTCTAAC+TGG - chr3_1:79550844-79550863 Msa0378720:intron 30.0%
!! ACAGAGATTTGTTTCTAACT+GGG - chr3_1:79550845-79550864 Msa0378720:intron 30.0%
TCAACAGCTAGAAAATTGTA+AGG + chr3_1:79551084-79551103 None:intergenic 30.0%
TACCAAAATTGAATTGCAGT+TGG - chr3_1:79551104-79551123 Msa0378720:CDS 30.0%
ACCAAAATTGAATTGCAGTT+GGG - chr3_1:79551105-79551124 Msa0378720:CDS 30.0%
! ATGCAACTGATTTCAATTCA+AGG - chr3_1:79551145-79551164 Msa0378720:intron 30.0%
! TGCAACTGATTTCAATTCAA+GGG - chr3_1:79551146-79551165 Msa0378720:intron 30.0%
TGAAATGATAGATGTATGTG+TGG - chr3_1:79551637-79551656 Msa0378720:intron 30.0%
AGGTTACAAACTACTTAAAC+AGG - chr3_1:79551666-79551685 Msa0378720:intron 30.0%
!!! AAGGTTTTAAATTGCAGTTG+TGG - chr3_1:79551767-79551786 Msa0378720:intron 30.0%
AAGGTTATAAAACATGTCCA+CGG + chr3_1:79551897-79551916 None:intergenic 30.0%
!!! GTTATTTTAGCTTAGTGAGA+AGG + chr3_1:79551923-79551942 None:intergenic 30.0%
TTTATCAATGATCCAACAAC+AGG + chr3_1:79552123-79552142 None:intergenic 30.0%
ATTGATAAAAGCTGGAGTTA+AGG - chr3_1:79552134-79552153 Msa0378720:intron 30.0%
! TATTCTGTTGCTTAAACTAG+AGG - chr3_1:79552207-79552226 Msa0378720:intron 30.0%
! ATTCTGTTGCTTAAACTAGA+GGG - chr3_1:79552208-79552227 Msa0378720:intron 30.0%
CAGAAGCTTAGTTCAAAAAT+TGG - chr3_1:79552327-79552346 Msa0378720:intron 30.0%
CAAAAATTGGCTAGACAATT+AGG - chr3_1:79552340-79552359 Msa0378720:intron 30.0%
! CTTTCTGGTCACTTATAAAA+TGG + chr3_1:79552478-79552497 None:intergenic 30.0%
CAGACAATACTTCATAAAGT+CGG + chr3_1:79552714-79552733 None:intergenic 30.0%
ATTGAGACGTCATTTAACTA+AGG + chr3_1:79552770-79552789 None:intergenic 30.0%
TTAGTTAAATGACGTCTCAA+TGG - chr3_1:79552769-79552788 Msa0378720:intron 30.0%
CACTCTTTGGATCTAATAAA+AGG - chr3_1:79552828-79552847 Msa0378720:intron 30.0%
!! ATAAAAGGGTGCTTAGATAT+AGG - chr3_1:79552843-79552862 Msa0378720:intron 30.0%
!! TAAAAGGGTGCTTAGATATA+GGG - chr3_1:79552844-79552863 Msa0378720:intron 30.0%
!! TTTAATGAAACTTAGGTTGG+TGG - chr3_1:79553123-79553142 Msa0378720:intron 30.0%
!! TTAATGAAACTTAGGTTGGT+GGG - chr3_1:79553124-79553143 Msa0378720:intron 30.0%
CTATTCAAATCATTCTTGGA+AGG - chr3_1:79553240-79553259 Msa0378720:intron 30.0%
AGAATGTCAAAAAGAAAAGC+TGG - chr3_1:79553398-79553417 Msa0378720:intron 30.0%
CAAAAGGTTGAAAACCAAAA+AGG + chr3_1:79553449-79553468 None:intergenic 30.0%
CACAAAAACTCAAGTACAAA+AGG + chr3_1:79553465-79553484 None:intergenic 30.0%
!! GGATTCTTGTTCTAAGTTTT+TGG - chr3_1:79553565-79553584 Msa0378720:intron 30.0%
ATACAAGGTCATTACTCTTT+AGG - chr3_1:79553613-79553632 Msa0378720:intron 30.0%
!! CCTATTTAAAAAGTGTCGAA+CGG + chr3_1:79553689-79553708 None:intergenic 30.0%
TCTTTCACAATCGTGAGATT+CGG + chr3_1:79547969-79547988 None:intergenic 35.0%
TCAAATTGGACCAGATATTC+TGG + chr3_1:79548064-79548083 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG + chr3_1:79548567-79548586 None:intergenic 35.0%
! TCAAAAAGCGCAAAAATGCA+AGG - chr3_1:79548906-79548925 Msa0378720:intron 35.0%
! CATAGTGCTAGTACTCATTT+TGG - chr3_1:79548942-79548961 Msa0378720:intron 35.0%
! TAGTGCTAGTACTCATTTTG+GGG - chr3_1:79548944-79548963 Msa0378720:intron 35.0%
ATTATGATCCACTACACCAT+TGG + chr3_1:79549145-79549164 None:intergenic 35.0%
! CTCACGAGTTGAGTTTAATA+AGG + chr3_1:79549339-79549358 None:intergenic 35.0%
GTGACTTTACAAAATCTACC+TGG + chr3_1:79549536-79549555 None:intergenic 35.0%
TGCATGCATGTTTGATATCA+CGG + chr3_1:79549558-79549577 None:intergenic 35.0%
TATAGAGAGAAAGAGTGATG+GGG + chr3_1:79549856-79549875 None:intergenic 35.0%
GTATAGAGAGAAAGAGTGAT+GGG + chr3_1:79549857-79549876 None:intergenic 35.0%
AGTATAGAGAGAAAGAGTGA+TGG + chr3_1:79549858-79549877 None:intergenic 35.0%
! TGTTGAAAGGCTATGTTTTG+AGG + chr3_1:79550035-79550054 None:intergenic 35.0%
ATAGCCTTTCAACAATTCTC+AGG - chr3_1:79550041-79550060 Msa0378720:intron 35.0%
!!! AGAACAAGAGGTTTTGAAGA+TGG + chr3_1:79550134-79550153 None:intergenic 35.0%
CTTCAAAACCTCTTGTTCTT+TGG - chr3_1:79550135-79550154 Msa0378720:CDS 35.0%
TCAATGAATGCATGTCATTG+TGG + chr3_1:79550301-79550320 None:intergenic 35.0%
! AGAGGCAAACATGCTTTATT+TGG - chr3_1:79550357-79550376 Msa0378720:CDS 35.0%
TAAGAAAATCCAACTCCAAC+TGG + chr3_1:79550388-79550407 None:intergenic 35.0%
!! CAGAGATTTGTTTCTAACTG+GGG - chr3_1:79550846-79550865 Msa0378720:intron 35.0%
ATCATAAGCTTTGCAAGTTG+AGG + chr3_1:79550976-79550995 None:intergenic 35.0%
CCAAAATTGAATTGCAGTTG+GGG - chr3_1:79551106-79551125 Msa0378720:CDS 35.0%
!! TCAGTTGCATATTCTAGAAC+TGG + chr3_1:79551135-79551154 None:intergenic 35.0%
! ATTCAAGGGCTGAATTCTTT+TGG - chr3_1:79551160-79551179 Msa0378720:intron 35.0%
AGTTTCACCTCTTTGTTCAA+AGG - chr3_1:79551272-79551291 Msa0378720:CDS 35.0%
ACCTCTTTGTTCAAAGGTTA+TGG - chr3_1:79551278-79551297 Msa0378720:CDS 35.0%
CCTCTTTGTTCAAAGGTTAT+GGG - chr3_1:79551279-79551298 Msa0378720:CDS 35.0%
TTGTTCAAAGGTTATGGGAT+TGG - chr3_1:79551284-79551303 Msa0378720:CDS 35.0%
GCTTCAAAGACTATAAGTGA+TGG + chr3_1:79551455-79551474 None:intergenic 35.0%
! CATTTCATTTGCTTGCTACA+AGG + chr3_1:79551624-79551643 None:intergenic 35.0%
! GTGGACATGTTTTATAACCT+TGG - chr3_1:79551896-79551915 Msa0378720:intron 35.0%
AAAGATCATCAGTGATCACA+TGG + chr3_1:79552040-79552059 None:intergenic 35.0%
! CTGATGATCTTTGTCTGTTT+TGG - chr3_1:79552048-79552067 Msa0378720:intron 35.0%
GTTGGATCATTGATAAAAGC+TGG - chr3_1:79552126-79552145 Msa0378720:intron 35.0%
GAGTTAAGGTCCTAATTTAC+AGG - chr3_1:79552148-79552167 Msa0378720:intron 35.0%
TAAGGTCCTAATTTACAGGT+AGG - chr3_1:79552152-79552171 Msa0378720:intron 35.0%
ACACTTCCTACCTGTAAATT+AGG + chr3_1:79552161-79552180 None:intergenic 35.0%
GTGCATTATTATTGCTACAG+TGG - chr3_1:79552271-79552290 Msa0378720:intron 35.0%
AAAAGGATCTTTCCACTTTG+GGG + chr3_1:79552540-79552559 None:intergenic 35.0%
GAAAAGGATCTTTCCACTTT+GGG + chr3_1:79552541-79552560 None:intergenic 35.0%
AAGACTAAAGCCAATGGAAA+AGG + chr3_1:79552557-79552576 None:intergenic 35.0%
TTGACAAAGACTAAAGCCAA+TGG + chr3_1:79552563-79552582 None:intergenic 35.0%
!! TGGCTTTAGTCTTTGTCAAT+TGG - chr3_1:79552564-79552583 Msa0378720:intron 35.0%
! GGCTTTAGTCTTTGTCAATT+GGG - chr3_1:79552565-79552584 Msa0378720:intron 35.0%
TAACTAAGGATAAAACTGCG+AGG + chr3_1:79552756-79552775 None:intergenic 35.0%
!! CCAAAGAGTGCTTACATATA+GGG + chr3_1:79552818-79552837 None:intergenic 35.0%
!! TCCAAAGAGTGCTTACATAT+AGG + chr3_1:79552819-79552838 None:intergenic 35.0%
!! ATGTGGGACTTTTTAGTGTA+CGG - chr3_1:79552916-79552935 Msa0378720:intron 35.0%
CAATGGTTAAGGTCGTAAAA+TGG + chr3_1:79553030-79553049 None:intergenic 35.0%
TAAAAGTGGTGCAATGGTTA+AGG + chr3_1:79553041-79553060 None:intergenic 35.0%
CGTACAATACCTCATAAAAG+TGG + chr3_1:79553055-79553074 None:intergenic 35.0%
!! TTATGAGGTATTGTACGCTT+AGG - chr3_1:79553058-79553077 Msa0378720:intron 35.0%
! CGTGCTATTCAAATCATTCT+TGG - chr3_1:79553236-79553255 Msa0378720:intron 35.0%
TCAAATCATTCTTGGAAGGA+AGG - chr3_1:79553244-79553263 Msa0378720:intron 35.0%
TGTCAGAAAACTTCAGGTAA+AGG + chr3_1:79553270-79553289 None:intergenic 35.0%
GTAAACACACAAAAGGGAAA+GGG + chr3_1:79553295-79553314 None:intergenic 35.0%
AGTAAACACACAAAAGGGAA+AGG + chr3_1:79553296-79553315 None:intergenic 35.0%
!! CCGTTCGACACTTTTTAAAT+AGG - chr3_1:79553686-79553705 Msa0378720:intron 35.0%
TTATTCTCCCTTTGCCCATT+TGG - chr3_1:79547815-79547834 Msa0378720:three_prime_UTR 40.0%
AAATCTGCCAAATGGGCAAA+GGG + chr3_1:79547825-79547844 None:intergenic 40.0%
AAAATCTGCCAAATGGGCAA+AGG + chr3_1:79547826-79547845 None:intergenic 40.0%
!! ACCAGATATTCTGGAACAGA+GGG + chr3_1:79548055-79548074 None:intergenic 40.0%
TATGGAATAGATAGACCCTC+CGG - chr3_1:79548288-79548307 Msa0378720:CDS 40.0%
TGAATTTCGATTGCAGCAAC+CGG + chr3_1:79548310-79548329 None:intergenic 40.0%
TGCTGCAATCGAAATTCAAG+AGG - chr3_1:79548312-79548331 Msa0378720:CDS 40.0%
TGAGTAGGGACTAATACTCA+GGG + chr3_1:79548461-79548480 None:intergenic 40.0%
TTGAGTAGGGACTAATACTC+AGG + chr3_1:79548462-79548481 None:intergenic 40.0%
! AGTGCTAGTACTCATTTTGG+GGG - chr3_1:79548945-79548964 Msa0378720:intron 40.0%
ATCATGCTATCCATCTCCAA+TGG - chr3_1:79549126-79549145 Msa0378720:CDS 40.0%
AGGTTAAGAGACCGTTTAGA+AGG - chr3_1:79549234-79549253 Msa0378720:intron 40.0%
TTGCATTGAATTTAGGGGGA+TGG + chr3_1:79549398-79549417 None:intergenic 40.0%
ATTTCAAATGTGCACACACC+AGG - chr3_1:79549515-79549534 Msa0378720:intron 40.0%
AACAATTACCACGATGTGCT+GGG + chr3_1:79549657-79549676 None:intergenic 40.0%
! GTTGTGAGAAGTACAAGGTT+GGG + chr3_1:79549798-79549817 None:intergenic 40.0%
! TGTTGTGAGAAGTACAAGGT+TGG + chr3_1:79549799-79549818 None:intergenic 40.0%
! CTAGTGTTGTGAGAAGTACA+AGG + chr3_1:79549803-79549822 None:intergenic 40.0%
TCTCATGGCAATGACAACAA+TGG - chr3_1:79549914-79549933 Msa0378720:intron 40.0%
GACAAAATTGTTACCCTTCC+TGG - chr3_1:79550005-79550024 Msa0378720:intron 40.0%
GTAGGTGCATTCTCAGAAAA+TGG - chr3_1:79550191-79550210 Msa0378720:CDS 40.0%
AATGGACCCTTTAGACCAAA+TGG - chr3_1:79550209-79550228 Msa0378720:intron 40.0%
! CTTTATTTGGAGACACCAGT+TGG - chr3_1:79550370-79550389 Msa0378720:CDS 40.0%
TACAACAACAGTGAATGACG+AGG - chr3_1:79550429-79550448 Msa0378720:intron 40.0%
AAGGGACAATCTTGTATTCC+TGG - chr3_1:79550789-79550808 Msa0378720:intron 40.0%
ATCTTGTATTCCTGGAACGT+TGG - chr3_1:79550797-79550816 Msa0378720:intron 40.0%
! CCCCAACTGCAATTCAATTT+TGG + chr3_1:79551109-79551128 None:intergenic 40.0%
! GCTGAATTCTTTTGGTCACA+TGG - chr3_1:79551168-79551187 Msa0378720:intron 40.0%
CCCATAACCTTTGAACAAAG+AGG + chr3_1:79551282-79551301 None:intergenic 40.0%
AGGTTGAGGAGAAATAACCT+TGG + chr3_1:79551388-79551407 None:intergenic 40.0%
! GGAAAAGCATGAGAAAGGAA+AGG + chr3_1:79551434-79551453 None:intergenic 40.0%
! GTGATGGAAAAGCATGAGAA+AGG + chr3_1:79551439-79551458 None:intergenic 40.0%
AGATGTATGTGTGGATGACA+AGG - chr3_1:79551646-79551665 Msa0378720:intron 40.0%
GCACTTCATGCAAAACTTGT+TGG - chr3_1:79551704-79551723 Msa0378720:intron 40.0%
CAGCAAGTAAGTCATTCTCA+AGG - chr3_1:79551748-79551767 Msa0378720:intron 40.0%
GACCAGTGAAGCTAAATCAT+TGG + chr3_1:79551962-79551981 None:intergenic 40.0%
TCATCAGTGATCACATGGAT+TGG + chr3_1:79552035-79552054 None:intergenic 40.0%
AGTTAAGCACATCATAGTCC+AGG + chr3_1:79552083-79552102 None:intergenic 40.0%
GGACTATGATGTGCTTAACT+TGG - chr3_1:79552083-79552102 Msa0378720:intron 40.0%
CAACAGTTCCTTACAGAGTA+TGG - chr3_1:79552371-79552390 Msa0378720:intron 40.0%
CCTTCAAACCATACTCTGTA+AGG + chr3_1:79552382-79552401 None:intergenic 40.0%
CCTTACAGAGTATGGTTTGA+AGG - chr3_1:79552379-79552398 Msa0378720:intron 40.0%
AAAGGATCTTTCCACTTTGG+GGG + chr3_1:79552539-79552558 None:intergenic 40.0%
GGAAAAGGATCTTTCCACTT+TGG + chr3_1:79552542-79552561 None:intergenic 40.0%
! GTGGAAAGATCCTTTTCCAT+TGG - chr3_1:79552544-79552563 Msa0378720:intron 40.0%
AAGTCGGTACGAAAGATTTG+AGG + chr3_1:79552698-79552717 None:intergenic 40.0%
! AGAGTGCTTACATATAGGGA+CGG + chr3_1:79552814-79552833 None:intergenic 40.0%
CCCTATATGTAAGCACTCTT+TGG - chr3_1:79552815-79552834 Msa0378720:intron 40.0%
! GTTGAGATTAAGGTGCTACA+GGG - chr3_1:79552965-79552984 Msa0378720:intron 40.0%
! TTGAGATTAAGGTGCTACAG+GGG - chr3_1:79552966-79552985 Msa0378720:intron 40.0%
!! ACCATTGCACCACTTTTATG+AGG - chr3_1:79553043-79553062 Msa0378720:intron 40.0%
ACCTCATAAAAGTGGTGCAA+TGG + chr3_1:79553047-79553066 None:intergenic 40.0%
AATAGCACGAGTGATCTTTC+AGG + chr3_1:79553225-79553244 None:intergenic 40.0%
GTTGTTGAAGAGAATGCAAG+TGG - chr3_1:79553544-79553563 Msa0378720:intron 40.0%
!! CTAAGTTTTTGGGCCAACAA+TGG - chr3_1:79553576-79553595 Msa0378720:intron 40.0%
AACTCAAACTCGTTGCAGAT+CGG - chr3_1:79553653-79553672 Msa0378720:intron 40.0%
TCCCTCTGTTCCAGAATATC+TGG - chr3_1:79548051-79548070 Msa0378720:three_prime_UTR 45.0%
!! GACCAGATATTCTGGAACAG+AGG + chr3_1:79548056-79548075 None:intergenic 45.0%
! GTGCTAGTACTCATTTTGGG+GGG - chr3_1:79548946-79548965 Msa0378720:intron 45.0%
ATCCATCTCCAATGGTGTAG+TGG - chr3_1:79549134-79549153 Msa0378720:CDS 45.0%
ATCCACTACACCATTGGAGA+TGG + chr3_1:79549139-79549158 None:intergenic 45.0%
GAACAATTACCACGATGTGC+TGG + chr3_1:79549658-79549677 None:intergenic 45.0%
!!! GTTTTGAGGTTGTCCAGGAA+GGG + chr3_1:79550021-79550040 None:intergenic 45.0%
!!! TGTTTTGAGGTTGTCCAGGA+AGG + chr3_1:79550022-79550041 None:intergenic 45.0%
!!! GCTATGTTTTGAGGTTGTCC+AGG + chr3_1:79550026-79550045 None:intergenic 45.0%
CCATTGAGCCAAAGAACAAG+AGG + chr3_1:79550146-79550165 None:intergenic 45.0%
! CCTCTTGTTCTTTGGCTCAA+TGG - chr3_1:79550143-79550162 Msa0378720:CDS 45.0%
! CTTGTTCTTTGGCTCAATGG+AGG - chr3_1:79550146-79550165 Msa0378720:CDS 45.0%
ACTCCAAGAGAAGAACAACC+AGG + chr3_1:79550173-79550192 None:intergenic 45.0%
GGTTGTTCTTCTCTTGGAGT+AGG - chr3_1:79550173-79550192 Msa0378720:CDS 45.0%
ACAGTGAATGACGAGGAAAC+AGG - chr3_1:79550436-79550455 Msa0378720:intron 45.0%
! ACTTGTTGAACCAACGTTCC+AGG + chr3_1:79550810-79550829 None:intergenic 45.0%
CTAACTGGGGAAAGTTATGC+AGG - chr3_1:79550859-79550878 Msa0378720:intron 45.0%
AAGACACTCACTTGAGGTTG+AGG + chr3_1:79551402-79551421 None:intergenic 45.0%
CAAGAGAAGACACTCACTTG+AGG + chr3_1:79551408-79551427 None:intergenic 45.0%
AAACAGGAGAGATGTGCAAG+AGG - chr3_1:79551682-79551701 Msa0378720:intron 45.0%
!! AACTTGTTGGAGTTCGCAAG+TGG - chr3_1:79551717-79551736 Msa0378720:intron 45.0%
! ACTTGTTGGAGTTCGCAAGT+GGG - chr3_1:79551718-79551737 Msa0378720:intron 45.0%
GGTTTATGCGGCATCATTTG+AGG - chr3_1:79551827-79551846 Msa0378720:intron 45.0%
! CGATTTGGGCTGTGACATTA+AGG + chr3_1:79551870-79551889 None:intergenic 45.0%
ATGTCCACGGACAACGATTT+GGG + chr3_1:79551884-79551903 None:intergenic 45.0%
TAGCTTAGTGAGAAGGACCA+AGG + chr3_1:79551916-79551935 None:intergenic 45.0%
! GGCCAATGATTTAGCTTCAC+TGG - chr3_1:79551957-79551976 Msa0378720:intron 45.0%
!!! CTGTTTTGGTAACAGTGTCC+TGG - chr3_1:79552062-79552081 Msa0378720:intron 45.0%
! GATCCAACAACAGGAAGTGT+TGG + chr3_1:79552114-79552133 None:intergenic 45.0%
AGTATGGTTTGAAGGCCAAC+AGG - chr3_1:79552387-79552406 Msa0378720:intron 45.0%
TGCTTACATATAGGGACGGA+GGG + chr3_1:79552810-79552829 None:intergenic 45.0%
! AGGGTGCTTAGATATAGGGA+CGG - chr3_1:79552848-79552867 Msa0378720:intron 45.0%
TGCTTAGATATAGGGACGGA+GGG - chr3_1:79552852-79552871 Msa0378720:intron 45.0%
CCTCGGTTCTTACGTAATGT+GGG - chr3_1:79552900-79552919 Msa0378720:intron 45.0%
TGAGGCTGAGGTTGAGATTA+AGG - chr3_1:79552955-79552974 Msa0378720:intron 45.0%
! GGTTGAGATTAAGGTGCTAC+AGG - chr3_1:79552964-79552983 Msa0378720:intron 45.0%
AAGGTCGTAAAATGGCCTCT+AGG + chr3_1:79553022-79553041 None:intergenic 45.0%
!! ATGAAACTTAGGTTGGTGGG+TGG - chr3_1:79553127-79553146 Msa0378720:intron 45.0%
GATCTTTCAGGCTGTGAGAA+AGG + chr3_1:79553213-79553232 None:intergenic 45.0%
AGGGTGTGTCAGAAAACTTC+AGG + chr3_1:79553276-79553295 None:intergenic 45.0%
!!! TATAAGTAAATTTTTTTTAT+AGG - chr3_1:79548797-79548816 Msa0378720:intron 5.0%
!!! ATAAGTAAATTTTTTTTATA+GGG - chr3_1:79548798-79548817 Msa0378720:intron 5.0%
!! AAAAAAGTAATATAAAAAAT+TGG + chr3_1:79553424-79553443 None:intergenic 5.0%
!!! AATTTTTTATATTACTTTTT+TGG - chr3_1:79553423-79553442 Msa0378720:intron 5.0%
TTTCGATTGCAGCAACCGGA+GGG + chr3_1:79548306-79548325 None:intergenic 50.0%
ATTTCGATTGCAGCAACCGG+AGG + chr3_1:79548307-79548326 None:intergenic 50.0%
AGTACAAGGTTGGGTGTGGT+GGG + chr3_1:79549789-79549808 None:intergenic 50.0%
AAGTACAAGGTTGGGTGTGG+TGG + chr3_1:79549790-79549809 None:intergenic 50.0%
! GAGAAGTACAAGGTTGGGTG+TGG + chr3_1:79549793-79549812 None:intergenic 50.0%
! AGAGAGAAAGAGTGATGGGG+TGG + chr3_1:79549853-79549872 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCA+TGG - chr3_1:79549899-79549918 Msa0378720:intron 50.0%
GGACCTGGTTGTTCTTCTCT+TGG - chr3_1:79550167-79550186 Msa0378720:CDS 50.0%
TTGGAGACACCAGTTGGAGT+TGG - chr3_1:79550376-79550395 Msa0378720:intron 50.0%
CATGTCCACGGACAACGATT+TGG + chr3_1:79551885-79551904 None:intergenic 50.0%
GTGCCAACACTTCCTGTTGT+TGG - chr3_1:79552108-79552127 Msa0378720:intron 50.0%
GACTCAGTGATTCCACTGAC+TGG - chr3_1:79552301-79552320 Msa0378720:intron 50.0%
AAGCTTCTGCTTCCAGTCAG+TGG + chr3_1:79552316-79552335 None:intergenic 50.0%
AGTGACCAGAAAGCCTTCAG+TGG - chr3_1:79552485-79552504 Msa0378720:intron 50.0%
TGACTCCACTGAAGGCTTTC+TGG + chr3_1:79552493-79552512 None:intergenic 50.0%
AAGCCTTCAGTGGAGTCACT+AGG - chr3_1:79552495-79552514 Msa0378720:intron 50.0%
AGCCTTCAGTGGAGTCACTA+GGG - chr3_1:79552496-79552515 Msa0378720:intron 50.0%
ATCCCTAGTGACTCCACTGA+AGG + chr3_1:79552501-79552520 None:intergenic 50.0%
GACTACTCTTTCCCCCAAAG+TGG - chr3_1:79552525-79552544 Msa0378720:intron 50.0%
GTGCTTACATATAGGGACGG+AGG + chr3_1:79552811-79552830 None:intergenic 50.0%
GTGCTTAGATATAGGGACGG+AGG - chr3_1:79552851-79552870 Msa0378720:intron 50.0%
GCCTCGGTTCTTACGTAATG+TGG - chr3_1:79552899-79552918 Msa0378720:intron 50.0%
CCCACATTACGTAAGAACCG+AGG + chr3_1:79552903-79552922 None:intergenic 50.0%
! GTGTACGGAACACTAGTCTC+CGG - chr3_1:79552931-79552950 Msa0378720:intron 50.0%
ATCTCAACCTCAGCCTCAAC+CGG + chr3_1:79552953-79552972 None:intergenic 50.0%
! GGTGGGTGGACTCAAGTTTA+TGG - chr3_1:79553141-79553160 Msa0378720:intron 50.0%
CTCTCATTTGCCACAGTGAG+AGG - chr3_1:79553171-79553190 Msa0378720:intron 50.0%
AGACAAGACCCAGCACATCG+TGG - chr3_1:79549646-79549665 Msa0378720:intron 55.0%
GTACAAGGTTGGGTGTGGTG+GGG + chr3_1:79549788-79549807 None:intergenic 55.0%
! CTTTGGCTCAATGGAGGACC+TGG - chr3_1:79550152-79550171 Msa0378720:CDS 55.0%
CTTGGACTGTGACAGCACAG+AGG + chr3_1:79551370-79551389 None:intergenic 55.0%
CTCTGTGCTGTCACAGTCCA+AGG - chr3_1:79551368-79551387 Msa0378720:CDS 55.0%
ACAGCCCAAATCGTTGTCCG+TGG - chr3_1:79551877-79551896 Msa0378720:intron 55.0%
! GGAACACTAGTCTCCGGTTG+AGG - chr3_1:79552937-79552956 Msa0378720:intron 55.0%
AGAGCCTAAGCCACACACGA+GGG + chr3_1:79552999-79553018 None:intergenic 55.0%
TGTGGCTTAGGCTCTCCTAG+AGG - chr3_1:79553004-79553023 Msa0378720:intron 55.0%
ATGTGCAGCACCTCTCACTG+TGG + chr3_1:79553184-79553203 None:intergenic 55.0%
! GTGTGGTGGGGCAATGTGGT+GGG + chr3_1:79549776-79549795 None:intergenic 60.0%
! TTGGGTGTGGTGGGGCAATG+TGG + chr3_1:79549780-79549799 None:intergenic 60.0%
CTAGTCTCCGGTTGAGGCTG+AGG - chr3_1:79552943-79552962 Msa0378720:intron 60.0%
! GGGTTTTCAGCCCTCGTGTG+TGG - chr3_1:79552986-79553005 Msa0378720:intron 60.0%
TCAGCCCTCGTGTGTGGCTT+AGG - chr3_1:79552992-79553011 Msa0378720:intron 60.0%
GAGAGCCTAAGCCACACACG+AGG + chr3_1:79553000-79553019 None:intergenic 60.0%
! TGGTGGGGCAATGTGGTGGG+TGG + chr3_1:79549773-79549792 None:intergenic 65.0%
! GGTGTGGTGGGGCAATGTGG+TGG + chr3_1:79549777-79549796 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79547800 79553712 79547800 ID=Msa0378720;Name=Msa0378720
chr3_1 mRNA 79547800 79553712 79547800 ID=Msa0378720-mRNA-1;Parent=Msa0378720;Name=Msa0378720-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.7|0.54|0.90|0.8|0.63|11|425|383
chr3_1 exon 79547800 79548374 79547800 ID=Msa0378720-mRNA-1:exon:19673;Parent=Msa0378720-mRNA-1
chr3_1 exon 79549104 79549221 79549104 ID=Msa0378720-mRNA-1:exon:19672;Parent=Msa0378720-mRNA-1
chr3_1 exon 79549343 79549435 79549343 ID=Msa0378720-mRNA-1:exon:19671;Parent=Msa0378720-mRNA-1
chr3_1 exon 79549759 79549844 79549759 ID=Msa0378720-mRNA-1:exon:19670;Parent=Msa0378720-mRNA-1
chr3_1 exon 79550123 79550218 79550123 ID=Msa0378720-mRNA-1:exon:19669;Parent=Msa0378720-mRNA-1
chr3_1 exon 79550264 79550389 79550264 ID=Msa0378720-mRNA-1:exon:19668;Parent=Msa0378720-mRNA-1
chr3_1 exon 79550471 79550550 79550471 ID=Msa0378720-mRNA-1:exon:19667;Parent=Msa0378720-mRNA-1
chr3_1 exon 79550632 79550724 79550632 ID=Msa0378720-mRNA-1:exon:19666;Parent=Msa0378720-mRNA-1
chr3_1 exon 79551055 79551153 79551055 ID=Msa0378720-mRNA-1:exon:19665;Parent=Msa0378720-mRNA-1
chr3_1 exon 79551243 79551449 79551243 ID=Msa0378720-mRNA-1:exon:19664;Parent=Msa0378720-mRNA-1
chr3_1 exon 79553709 79553712 79553709 ID=Msa0378720-mRNA-1:exon:19663;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79553709 79553712 79553709 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79551243 79551449 79551243 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79551055 79551153 79551055 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79550632 79550724 79550632 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79550471 79550550 79550471 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79550264 79550389 79550264 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79550123 79550218 79550123 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79549759 79549844 79549759 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79549343 79549435 79549343 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79549104 79549221 79549104 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 CDS 79548225 79548374 79548225 ID=Msa0378720-mRNA-1:cds;Parent=Msa0378720-mRNA-1
chr3_1 three_prime_UTR 79547800 79548224 79547800 ID=Msa0378720-mRNA-1:three_prime_utr;Parent=Msa0378720-mRNA-1
Gene Sequence

>Msa0378720

ATGAGATATGTCACAGTTGATAACAAAAAACACAAGTCACTTTTTTACTATTTTGCTGAATCAGAAACTGATCCATCTTCAAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTTGGAGTAGGTGCATTCTCAGAAAATGGACCCTTTAGACCAAATGGTGAATTTCTTATTAAAAATGAACATAGTTGGAATAAAGAGGCAAACATGCTTTATTTGGAGACACCAGTTGGAGTTGGATTTTCTTATGTTAAAGGTAGTTCTGCTTATACAACAACAGTGAATGACGAGGAAACAGCAAGGGACAATCTTGTATTCCTGGAACGTTGGTTCAACAAGTTTCCTCAATATAGAAACAGAGATTTGTTTCTAACTGGGGAAAGTTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTTATGATTGAAATGAACAAAAGAAACAAGATATTCAATCTTAAAGGCATAGCTTTGGGGAATCCAGTTCTAGAATATGCAACTGATTTCAATTCAAGGGCTGAATTCTTTTGGTCACATGGACTAATATCAGATGCAACTTACAACATGTTCACTAGAGTGTGTAATTACTCTCGTTATGTTATGGGATTGGTGAGTAAAGAAACTAGTAGATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCTGTGCTGTCACAGTCCAAGGTTACAAACTACTTAAACAGGAGAGATGTGCAAGAGGCACTTCATGCAAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAATGTCCTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTGTTGTTGGATCATTGATAAAAGCTGGAGTTAAGGTCCTAATTTACAGTGGAGATCAAGACTCAGTGATTCCACTGACTGGAAGCAGAAGCTTAGTTCAAAAATTGGCTAGACAATTAGGACTGAATACAACAGTTCCTTACAGAGTATGGTTTGAAGGCCAACAGGTTGGTGGGTGGACTCAAGTTTATGGCAATGTTCTCTCATTTGCCACAGTGAGAGGTGCTGCACATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTCGTGCTATTCAAATCATTCTTGGAAGGAAGGCCTTTACCTGAAGTTTTCTGA
Protein sequence

>Msa0378720

MRYVTVDNKKHKSLFYYFAESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEHSWNKEANMLYLETPVGVGFSYVKGSSAYTTTVNDEETARDNLVFLERWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNKRNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDATYNMFTRVCNYSRYVMGLVSKETSRFVDKYDVTLDVCISSVLSQSKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDVLNLEVPTLPVVGSLIKAGVKVLIYSGDQDSVIPLTGSRSLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNVLSFATVRGAAHEAPFSQPERSLVLFKSFLEGRPLPEVF*