Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150820 | XP_003623199.1 | 97.490 | 239 | 6 | 0 | 1 | 239 | 1 | 239 | 4.99e-169 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150820 | sp|P32110|GSTX6_SOYBN | 71.875 | 224 | 58 | 2 | 19 | 237 | 1 | 224 | 3.52e-109 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150820 | G7L6H3 | 97.490 | 239 | 6 | 0 | 1 | 239 | 1 | 239 | 2.38e-169 | 475 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069330 | Msa1150820 | 0.806541 | 7.825727e-50 | -8.615850e-47 |
| Msa0081520 | Msa1150820 | 0.831508 | 1.604485e-55 | -8.615850e-47 |
| Msa0104550 | Msa1150820 | 0.800340 | 1.509009e-48 | -8.615850e-47 |
| Msa0616510 | Msa1150820 | 0.813959 | 1.965830e-51 | -8.615850e-47 |
| Msa0626450 | Msa1150820 | 0.814350 | 1.611300e-51 | -8.615850e-47 |
| Msa0626490 | Msa1150820 | 0.810790 | 9.675535e-51 | -8.615850e-47 |
| Msa0664600 | Msa1150820 | 0.811309 | 7.467637e-51 | -8.615850e-47 |
| Msa0699840 | Msa1150820 | 0.848163 | 7.302075e-60 | -8.615850e-47 |
| Msa0741220 | Msa1150820 | 0.803545 | 3.312434e-49 | -8.615850e-47 |
| Msa0742740 | Msa1150820 | 0.859935 | 2.931092e-63 | -8.615850e-47 |
| Msa0768990 | Msa1150820 | 0.806544 | 7.811978e-50 | -8.615850e-47 |
| Msa0779870 | Msa1150820 | 0.823777 | 1.154077e-53 | -8.615850e-47 |
| Msa0782740 | Msa1150820 | 0.802449 | 5.581916e-49 | -8.615850e-47 |
| Msa0796160 | Msa1150820 | 0.841453 | 4.708860e-58 | -8.615850e-47 |
| Msa0820390 | Msa1150820 | 0.836874 | 7.243360e-57 | -8.615850e-47 |
| Msa0823820 | Msa1150820 | 0.876253 | 1.617696e-68 | -8.615850e-47 |
| Msa0829300 | Msa1150820 | 0.834474 | 2.935055e-56 | -8.615850e-47 |
| Msa0829330 | Msa1150820 | 0.832877 | 7.354536e-56 | -8.615850e-47 |
| Msa0833760 | Msa1150820 | 0.818155 | 2.272279e-52 | -8.615850e-47 |
| Msa0129940 | Msa1150820 | 0.805340 | 1.399729e-49 | -8.615850e-47 |
| Msa0164400 | Msa1150820 | 0.806299 | 8.799063e-50 | -8.615850e-47 |
| Msa0173890 | Msa1150820 | 0.817064 | 4.002291e-52 | -8.615850e-47 |
| Msa0174450 | Msa1150820 | 0.815237 | 1.024547e-51 | -8.615850e-47 |
| Msa0194820 | Msa1150820 | 0.815102 | 1.097952e-51 | -8.615850e-47 |
| Msa0194840 | Msa1150820 | 0.815479 | 9.053492e-52 | -8.615850e-47 |
| Msa0206840 | Msa1150820 | 0.830882 | 2.286740e-55 | -8.615850e-47 |
| Msa0218810 | Msa1150820 | 0.806414 | 8.321068e-50 | -8.615850e-47 |
| Msa0221000 | Msa1150820 | 0.824300 | 8.696661e-54 | -8.615850e-47 |
| Msa0225100 | Msa1150820 | 0.833637 | 4.755863e-56 | -8.615850e-47 |
| Msa0233320 | Msa1150820 | 0.800142 | 1.656024e-48 | -8.615850e-47 |
| Msa0367830 | Msa1150820 | 0.816078 | 6.656970e-52 | -8.615850e-47 |
| Msa0367870 | Msa1150820 | 0.823763 | 1.162828e-53 | -8.615850e-47 |
| Msa0371170 | Msa1150820 | 0.803890 | 2.808598e-49 | -8.615850e-47 |
| Msa0376630 | Msa1150820 | 0.817562 | 3.091637e-52 | -8.615850e-47 |
| Msa0378720 | Msa1150820 | 0.805792 | 1.124797e-49 | -8.615850e-47 |
| Msa0388770 | Msa1150820 | 0.839666 | 1.382780e-57 | -8.615850e-47 |
| Msa0393440 | Msa1150820 | 0.800531 | 1.379782e-48 | -8.615850e-47 |
| Msa0405710 | Msa1150820 | 0.809566 | 1.776050e-50 | -8.615850e-47 |
| Msa0415610 | Msa1150820 | 0.806749 | 7.071717e-50 | -8.615850e-47 |
| Msa0432380 | Msa1150820 | 0.807627 | 4.609067e-50 | -8.615850e-47 |
| Msa0462070 | Msa1150820 | 0.801506 | 8.718625e-49 | -8.615850e-47 |
| Msa0465400 | Msa1150820 | 0.814028 | 1.897418e-51 | -8.615850e-47 |
| Msa0474730 | Msa1150820 | 0.806691 | 7.273044e-50 | -8.615850e-47 |
| Msa1019470 | Msa1150820 | 0.816784 | 4.625966e-52 | -8.615850e-47 |
| Msa1020510 | Msa1150820 | 0.814329 | 1.628474e-51 | -8.615850e-47 |
| Msa1020630 | Msa1150820 | 0.850863 | 1.289660e-60 | -8.615850e-47 |
| Msa1023290 | Msa1150820 | 0.845275 | 4.496715e-59 | -8.615850e-47 |
| Msa1031930 | Msa1150820 | 0.826886 | 2.120723e-54 | -8.615850e-47 |
| Msa1050910 | Msa1150820 | 0.818052 | 2.396842e-52 | -8.615850e-47 |
| Msa1050960 | Msa1150820 | 0.807056 | 6.090885e-50 | -8.615850e-47 |
| Msa1062010 | Msa1150820 | 0.817889 | 2.609642e-52 | -8.615850e-47 |
| Msa1071770 | Msa1150820 | 0.834223 | 3.394262e-56 | -8.615850e-47 |
| Msa1078170 | Msa1150820 | 0.804678 | 1.925423e-49 | -8.615850e-47 |
| Msa1094190 | Msa1150820 | 0.805882 | 1.076931e-49 | -8.615850e-47 |
| Msa0249860 | Msa1150820 | 0.811649 | 6.299237e-51 | -8.615850e-47 |
| Msa0258310 | Msa1150820 | 0.805383 | 1.370684e-49 | -8.615850e-47 |
| Msa0263920 | Msa1150820 | 0.803501 | 3.382181e-49 | -8.615850e-47 |
| Msa0265850 | Msa1150820 | 0.804956 | 1.683865e-49 | -8.615850e-47 |
| Msa0266180 | Msa1150820 | 0.827519 | 1.495679e-54 | -8.615850e-47 |
| Msa0267920 | Msa1150820 | 0.810754 | 9.851747e-51 | -8.615850e-47 |
| Msa0287740 | Msa1150820 | 0.834802 | 2.427571e-56 | -8.615850e-47 |
| Msa0297790 | Msa1150820 | 0.803750 | 3.003569e-49 | -8.615850e-47 |
| Msa0300270 | Msa1150820 | 0.834377 | 3.105441e-56 | -8.615850e-47 |
| Msa0300320 | Msa1150820 | 0.824110 | 9.639825e-54 | -8.615850e-47 |
| Msa0326590 | Msa1150820 | 0.834396 | 3.071003e-56 | -8.615850e-47 |
| Msa0335800 | Msa1150820 | 0.836116 | 1.129646e-56 | -8.615850e-47 |
| Msa0337700 | Msa1150820 | 0.830203 | 3.350907e-55 | -8.615850e-47 |
| Msa1113800 | Msa1150820 | 0.849406 | 3.300506e-60 | -8.615850e-47 |
| Msa1117910 | Msa1150820 | 0.803326 | 3.677382e-49 | -8.615850e-47 |
| Msa1118600 | Msa1150820 | 0.809485 | 1.848968e-50 | -8.615850e-47 |
| Msa1132700 | Msa1150820 | 0.817093 | 3.942161e-52 | -8.615850e-47 |
| Msa1149170 | Msa1150820 | 0.817014 | 4.106389e-52 | -8.615850e-47 |
| Msa1150820 | Msa1158830 | 0.828273 | 9.854356e-55 | -8.615850e-47 |
| Msa1150820 | Msa1160500 | 0.843470 | 1.374091e-58 | -8.615850e-47 |
| Msa1150820 | Msa1181190 | 0.801831 | 7.479325e-49 | -8.615850e-47 |
| Msa1150820 | Msa1184330 | 0.856714 | 2.669838e-62 | -8.615850e-47 |
| Msa1150820 | Msa1227940 | 0.862309 | 5.552327e-64 | -8.615850e-47 |
| Msa1150820 | Msa1308140 | 0.810925 | 9.046268e-51 | -8.615850e-47 |
| Msa1150820 | Msa1341890 | 0.820599 | 6.299542e-53 | -8.615850e-47 |
| Msa1150820 | Msa1356830 | 0.820862 | 5.481891e-53 | -8.615850e-47 |
| Msa1150820 | Msa1432500 | 0.806751 | 7.066384e-50 | -8.615850e-47 |
| Msa1150820 | Msa1437940 | 0.805428 | 1.341618e-49 | -8.615850e-47 |
| Msa1150820 | Msa1439610 | 0.825608 | 4.273208e-54 | -8.615850e-47 |
| Msa1150820 | Msa1440880 | 0.819264 | 1.272602e-52 | -8.615850e-47 |
| Msa0580440 | Msa1150820 | 0.811720 | 6.079496e-51 | -8.615850e-47 |
| Msa0853760 | Msa1150820 | 0.804180 | 2.444363e-49 | -8.615850e-47 |
| Msa0863010 | Msa1150820 | 0.868921 | 4.555939e-66 | -8.615850e-47 |
| Msa0967870 | Msa1150820 | 0.823890 | 1.085786e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150820 | MtrunA17_Chr7g0240611 | 97.285 | 221 | 6 | 0 | 19 | 239 | 1 | 221 | 9.34e-159 | 438 |
| Msa1150820 | MtrunA17_Chr7g0240651 | 82.805 | 221 | 38 | 0 | 19 | 239 | 1 | 221 | 7.33e-127 | 358 |
| Msa1150820 | MtrunA17_Chr7g0240671 | 77.340 | 203 | 46 | 0 | 26 | 228 | 5 | 207 | 1.13e-116 | 332 |
| Msa1150820 | MtrunA17_Chr7g0240661 | 80.476 | 210 | 41 | 0 | 19 | 228 | 1 | 210 | 1.58e-116 | 332 |
| Msa1150820 | MtrunA17_Chr7g0240561 | 67.265 | 223 | 69 | 1 | 19 | 237 | 1 | 223 | 3.58e-109 | 313 |
| Msa1150820 | MtrunA17_Chr7g0240511 | 70.776 | 219 | 63 | 1 | 19 | 237 | 1 | 218 | 6.94e-107 | 307 |
| Msa1150820 | MtrunA17_Chr7g0240631 | 68.000 | 225 | 68 | 1 | 19 | 239 | 1 | 225 | 1.76e-106 | 306 |
| Msa1150820 | MtrunA17_Chr7g0240641 | 67.111 | 225 | 70 | 1 | 19 | 239 | 1 | 225 | 5.20e-106 | 305 |
| Msa1150820 | MtrunA17_Chr7g0240581 | 67.265 | 223 | 69 | 1 | 19 | 237 | 1 | 223 | 2.99e-105 | 303 |
| Msa1150820 | MtrunA17_Chr7g0240681 | 68.326 | 221 | 65 | 2 | 19 | 234 | 1 | 221 | 6.11e-103 | 297 |
| Msa1150820 | MtrunA17_Chr7g0240551 | 66.667 | 219 | 69 | 1 | 19 | 233 | 1 | 219 | 2.37e-102 | 296 |
| Msa1150820 | MtrunA17_Chr7g0240531 | 66.514 | 218 | 69 | 1 | 19 | 232 | 1 | 218 | 9.25e-99 | 287 |
| Msa1150820 | MtrunA17_Chr7g0240691 | 63.348 | 221 | 76 | 2 | 24 | 239 | 36 | 256 | 4.30e-96 | 281 |
| Msa1150820 | MtrunA17_Chr7g0240541 | 63.303 | 218 | 76 | 1 | 19 | 232 | 1 | 218 | 2.99e-95 | 278 |
| Msa1150820 | MtrunA17_Chr4g0008791 | 60.444 | 225 | 85 | 1 | 19 | 239 | 1 | 225 | 5.22e-93 | 272 |
| Msa1150820 | MtrunA17_Chr7g0240521 | 64.000 | 225 | 76 | 2 | 18 | 237 | 7 | 231 | 4.59e-91 | 268 |
| Msa1150820 | MtrunA17_Chr4g0008781 | 60.731 | 219 | 80 | 3 | 18 | 231 | 1 | 218 | 2.12e-90 | 265 |
| Msa1150820 | MtrunA17_Chr3g0132581 | 47.297 | 222 | 111 | 3 | 22 | 238 | 2 | 222 | 2.52e-60 | 189 |
| Msa1150820 | MtrunA17_Chr6g0483141 | 46.635 | 208 | 105 | 3 | 25 | 227 | 3 | 209 | 4.90e-60 | 188 |
| Msa1150820 | MtrunA17_Chr8g0379561 | 42.081 | 221 | 122 | 3 | 24 | 239 | 5 | 224 | 2.25e-56 | 179 |
| Msa1150820 | MtrunA17_Chr1g0196771 | 43.243 | 222 | 117 | 4 | 24 | 238 | 2 | 221 | 4.43e-55 | 176 |
| Msa1150820 | MtrunA17_Chr5g0417011 | 40.541 | 222 | 120 | 4 | 19 | 229 | 1 | 221 | 2.39e-54 | 174 |
| Msa1150820 | MtrunA17_Chr8g0379581 | 42.661 | 218 | 119 | 3 | 22 | 234 | 2 | 218 | 4.63e-54 | 173 |
| Msa1150820 | MtrunA17_Chr1g0196691 | 42.534 | 221 | 120 | 2 | 25 | 238 | 28 | 248 | 5.85e-54 | 174 |
| Msa1150820 | MtrunA17_Chr1g0196661 | 40.090 | 222 | 121 | 4 | 25 | 237 | 3 | 221 | 1.70e-49 | 161 |
| Msa1150820 | MtrunA17_Chr1g0212301 | 41.475 | 217 | 116 | 5 | 25 | 232 | 3 | 217 | 1.73e-49 | 161 |
| Msa1150820 | MtrunA17_Chr1g0196721 | 39.726 | 219 | 124 | 3 | 26 | 237 | 3 | 220 | 2.69e-47 | 156 |
| Msa1150820 | MtrunA17_Chr5g0415411 | 40.444 | 225 | 122 | 4 | 22 | 234 | 2 | 226 | 4.51e-47 | 155 |
| Msa1150820 | MtrunA17_Chr4g0029341 | 39.070 | 215 | 119 | 4 | 24 | 229 | 3 | 214 | 6.12e-47 | 155 |
| Msa1150820 | MtrunA17_Chr2g0312731 | 39.512 | 205 | 115 | 5 | 24 | 222 | 3 | 204 | 8.54e-44 | 147 |
| Msa1150820 | MtrunA17_Chr1g0196711 | 39.336 | 211 | 116 | 4 | 25 | 226 | 3 | 210 | 2.06e-43 | 146 |
| Msa1150820 | MtrunA17_Chr2g0312771 | 37.799 | 209 | 121 | 5 | 24 | 226 | 3 | 208 | 1.67e-42 | 143 |
| Msa1150820 | MtrunA17_Chr8g0363751 | 39.545 | 220 | 121 | 5 | 22 | 229 | 2 | 221 | 2.34e-42 | 144 |
| Msa1150820 | MtrunA17_Chr2g0312751 | 37.321 | 209 | 122 | 5 | 24 | 226 | 3 | 208 | 7.48e-42 | 142 |
| Msa1150820 | MtrunA17_Chr2g0312811 | 37.915 | 211 | 120 | 6 | 24 | 226 | 3 | 210 | 1.34e-40 | 139 |
| Msa1150820 | MtrunA17_Chr4g0069471 | 46.448 | 183 | 90 | 6 | 23 | 200 | 23 | 202 | 3.05e-40 | 137 |
| Msa1150820 | MtrunA17_Chr3g0107731 | 39.336 | 211 | 123 | 5 | 20 | 226 | 4 | 213 | 1.60e-39 | 136 |
| Msa1150820 | MtrunA17_Chr8g0357241 | 44.086 | 186 | 99 | 5 | 24 | 205 | 3 | 187 | 3.52e-39 | 135 |
| Msa1150820 | MtrunA17_Chr2g0312781 | 34.545 | 220 | 135 | 5 | 9 | 222 | 5 | 221 | 3.81e-39 | 135 |
| Msa1150820 | MtrunA17_Chr8g0357211 | 44.086 | 186 | 99 | 5 | 24 | 205 | 3 | 187 | 3.83e-39 | 135 |
| Msa1150820 | MtrunA17_Chr2g0312721 | 36.946 | 203 | 123 | 4 | 24 | 222 | 3 | 204 | 3.88e-39 | 135 |
| Msa1150820 | MtrunA17_Chr2g0312791 | 37.143 | 210 | 123 | 5 | 24 | 226 | 3 | 210 | 2.01e-38 | 133 |
| Msa1150820 | MtrunA17_Chr5g0433801 | 39.130 | 207 | 121 | 5 | 24 | 226 | 5 | 210 | 3.16e-37 | 130 |
| Msa1150820 | MtrunA17_Chr3g0107741 | 36.967 | 211 | 124 | 5 | 22 | 226 | 6 | 213 | 5.43e-37 | 129 |
| Msa1150820 | MtrunA17_Chr2g0312691 | 36.406 | 217 | 129 | 5 | 25 | 235 | 4 | 217 | 7.22e-37 | 129 |
| Msa1150820 | MtrunA17_Chr2g0312681 | 37.019 | 208 | 120 | 6 | 25 | 226 | 4 | 206 | 7.79e-36 | 126 |
| Msa1150820 | MtrunA17_Chr8g0391631 | 44.578 | 166 | 81 | 6 | 15 | 171 | 12 | 175 | 2.98e-34 | 121 |
| Msa1150820 | MtrunA17_Chr2g0312711 | 36.406 | 217 | 128 | 6 | 25 | 235 | 4 | 216 | 2.25e-33 | 120 |
| Msa1150820 | MtrunA17_Chr2g0313561 | 37.681 | 69 | 41 | 2 | 69 | 136 | 2 | 69 | 1.53e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150820 | AT2G29420.1 | 46.637 | 223 | 113 | 3 | 21 | 238 | 5 | 226 | 3.65e-67 | 207 |
| Msa1150820 | AT3G09270.1 | 48.869 | 221 | 105 | 5 | 23 | 236 | 4 | 223 | 1.72e-63 | 197 |
| Msa1150820 | AT2G29450.1 | 43.498 | 223 | 120 | 3 | 21 | 237 | 2 | 224 | 2.71e-57 | 182 |
| Msa1150820 | AT2G29490.1 | 45.133 | 226 | 115 | 5 | 19 | 237 | 1 | 224 | 4.08e-56 | 179 |
| Msa1150820 | AT2G29460.1 | 44.889 | 225 | 117 | 4 | 19 | 237 | 1 | 224 | 9.52e-56 | 178 |
| Msa1150820 | AT2G29480.1 | 45.370 | 216 | 111 | 4 | 19 | 228 | 1 | 215 | 8.49e-55 | 176 |
| Msa1150820 | AT2G29440.1 | 43.182 | 220 | 118 | 4 | 24 | 237 | 5 | 223 | 6.70e-52 | 168 |
| Msa1150820 | AT2G29470.1 | 43.056 | 216 | 115 | 5 | 19 | 227 | 1 | 215 | 3.73e-51 | 166 |
| Msa1150820 | AT1G59670.1 | 44.550 | 211 | 105 | 6 | 24 | 222 | 5 | 215 | 1.03e-47 | 157 |
| Msa1150820 | AT1G59700.1 | 43.913 | 230 | 114 | 7 | 24 | 238 | 5 | 234 | 7.87e-47 | 155 |
| Msa1150820 | AT1G27130.1 | 40.991 | 222 | 119 | 6 | 21 | 230 | 2 | 223 | 1.42e-46 | 154 |
| Msa1150820 | AT1G10370.1 | 43.192 | 213 | 104 | 7 | 19 | 218 | 1 | 209 | 5.47e-46 | 153 |
| Msa1150820 | AT1G27140.1 | 37.885 | 227 | 124 | 5 | 21 | 232 | 2 | 226 | 1.37e-44 | 150 |
| Msa1150820 | AT1G69930.1 | 39.912 | 228 | 119 | 7 | 17 | 228 | 2 | 227 | 3.52e-44 | 149 |
| Msa1150820 | AT1G78320.1 | 40.291 | 206 | 114 | 5 | 23 | 222 | 2 | 204 | 9.10e-43 | 144 |
| Msa1150820 | AT1G78340.1 | 48.387 | 155 | 77 | 3 | 24 | 176 | 3 | 156 | 7.51e-42 | 142 |
| Msa1150820 | AT1G10360.1 | 40.191 | 209 | 112 | 6 | 22 | 218 | 2 | 209 | 7.60e-42 | 142 |
| Msa1150820 | AT1G17180.1 | 41.379 | 203 | 114 | 5 | 24 | 222 | 3 | 204 | 1.77e-41 | 141 |
| Msa1150820 | AT1G78370.1 | 38.916 | 203 | 119 | 5 | 28 | 226 | 7 | 208 | 6.50e-40 | 137 |
| Msa1150820 | AT5G62480.1 | 37.281 | 228 | 127 | 6 | 23 | 235 | 6 | 232 | 1.11e-39 | 137 |
| Msa1150820 | AT1G78380.1 | 39.216 | 204 | 115 | 5 | 25 | 222 | 4 | 204 | 3.96e-39 | 135 |
| Msa1150820 | AT1G17170.1 | 37.156 | 218 | 127 | 5 | 24 | 235 | 3 | 216 | 9.61e-39 | 134 |
| Msa1150820 | AT1G53680.1 | 37.915 | 211 | 126 | 5 | 19 | 224 | 1 | 211 | 3.89e-37 | 130 |
| Msa1150820 | AT1G69920.1 | 36.493 | 211 | 122 | 5 | 21 | 219 | 30 | 240 | 4.93e-37 | 130 |
| Msa1150820 | AT1G17190.1 | 35.909 | 220 | 136 | 5 | 22 | 237 | 2 | 220 | 2.55e-36 | 128 |
| Msa1150820 | AT3G43800.1 | 37.379 | 206 | 120 | 7 | 22 | 219 | 2 | 206 | 8.64e-36 | 127 |
| Msa1150820 | AT1G78360.1 | 37.615 | 218 | 117 | 8 | 19 | 226 | 1 | 209 | 2.01e-35 | 125 |
| Msa1150820 | AT1G74590.1 | 33.766 | 231 | 141 | 5 | 19 | 238 | 1 | 230 | 3.45e-34 | 123 |
| Msa1150820 | AT1G78320.2 | 33.171 | 205 | 103 | 5 | 23 | 222 | 2 | 177 | 2.55e-26 | 101 |
| Msa1150820 | AT5G62480.2 | 29.515 | 227 | 120 | 6 | 23 | 235 | 6 | 206 | 2.41e-22 | 91.7 |
| Msa1150820 | AT5G62480.3 | 29.515 | 227 | 119 | 6 | 23 | 235 | 6 | 205 | 6.92e-22 | 90.5 |
| Msa1150820 | AT2G02380.1 | 26.667 | 210 | 139 | 6 | 23 | 220 | 9 | 215 | 2.07e-11 | 62.0 |
Find 50 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCATCAAAATAGAGTTAT+TGG | 0.213259 | 7_4:+34668121 | Msa1150820:exon |
| TTAAATACAATCCAGTTTAC+AGG | 0.242467 | 7_4:+34667405 | Msa1150820:CDS |
| AAAGAGCTTTGGCTCGTTTC+TGG | 0.246122 | 7_4:+34667540 | Msa1150820:CDS |
| GGCATAATTTCCTTGACTAT+TGG | 0.252367 | 7_4:-34668045 | None:intergenic |
| TTCTCGCGTTCTTTCTTATC+AGG | 0.258670 | 7_4:-34667823 | None:intergenic |
| TCTGCTACTTCTTGGAATAA+AGG | 0.300241 | 7_4:-34667955 | None:intergenic |
| GAATTGAAGGGAAAATTCTT+TGG | 0.311076 | 7_4:+34667889 | Msa1150820:CDS |
| TTACTCCATTTGTATAGCTT+TGG | 0.321457 | 7_4:-34668006 | None:intergenic |
| ACTGCAACTCTGCTACTTCT+TGG | 0.329911 | 7_4:-34667963 | None:intergenic |
| TGAGGAAGAAGTGAAGCTTT+TGG | 0.359834 | 7_4:+34667274 | Msa1150820:CDS |
| TAACGATCATTCGGCAAGAT+AGG | 0.374826 | 7_4:-34667515 | None:intergenic |
| ACAGGAACCATCCTGTAAAC+TGG | 0.376294 | 7_4:-34667416 | None:intergenic |
| CTGCTACTTCTTGGAATAAA+GGG | 0.379143 | 7_4:-34667954 | None:intergenic |
| TTCTTTGGAGGAGAAGAGAT+TGG | 0.382580 | 7_4:+34667904 | Msa1150820:CDS |
| TGTTTGAATTTCATTTCAAA+TGG | 0.410177 | 7_4:+34668145 | Msa1150820:three_prime_UTR |
| ATTTGAACTCTAATGACAAA+TGG | 0.412047 | 7_4:-34667311 | None:intergenic |
| GGGTGTTGAATACAAATATT+CGG | 0.429695 | 7_4:+34667349 | Msa1150820:CDS |
| TTTGAACTCTAATGACAAAT+GGG | 0.433615 | 7_4:-34667310 | None:intergenic |
| TTGCAACACTCTCTTGACTT+TGG | 0.436843 | 7_4:-34667228 | None:intergenic |
| TACCTTGTCATCGATGAACT+TGG | 0.442970 | 7_4:-34667564 | None:intergenic |
| TCAAATTGCGCTGGAATTGA+AGG | 0.462937 | 7_4:+34667328 | Msa1150820:CDS |
| GGCTAGCGAGGAACTATTGA+AGG | 0.466760 | 7_4:+34667846 | Msa1150820:CDS |
| GCTCTTTGATAACGATCATT+CGG | 0.472795 | 7_4:-34667524 | None:intergenic |
| TGATCGTTATCAAAGAGCTT+TGG | 0.480347 | 7_4:+34667529 | Msa1150820:CDS |
| GTTTCTTGAGAATGAATTGA+AGG | 0.483369 | 7_4:+34667876 | Msa1150820:CDS |
| TTGAAGGGAAAATTCTTTGG+AGG | 0.490147 | 7_4:+34667892 | Msa1150820:CDS |
| AAGAGAGTGTTGCAAGGCTA+TGG | 0.501914 | 7_4:+34667236 | Msa1150820:CDS |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7_4:+34667483 | Msa1150820:CDS |
| CAGAGTTGCAGTTGTTCACA+AGG | 0.505322 | 7_4:+34667974 | Msa1150820:CDS |
| CATTAGAGTTCAAATTGCGC+TGG | 0.507403 | 7_4:+34667319 | Msa1150820:CDS |
| AATTTCCAAAGCTATACAAA+TGG | 0.517213 | 7_4:+34668001 | Msa1150820:CDS |
| TAATTTCCTTGACTATTGGA+TGG | 0.528427 | 7_4:-34668041 | None:intergenic |
| TTTCTTGAGAATGAATTGAA+GGG | 0.537549 | 7_4:+34667877 | Msa1150820:CDS |
| TGGTGTGATGGCTGCATCTG+AGG | 0.543201 | 7_4:+34667256 | Msa1150820:CDS |
| ATCAGTGTGTGGCTGCTGCA+TGG | 0.567781 | 7_4:+34667785 | Msa1150820:intron |
| CAAATTGCGCTGGAATTGAA+GGG | 0.570885 | 7_4:+34667329 | Msa1150820:CDS |
| GTTGCAAGGCTATGGTGTGA+TGG | 0.586111 | 7_4:+34667244 | Msa1150820:CDS |
| AGAACGCGAGAAGGCTAGCG+AGG | 0.588979 | 7_4:+34667834 | Msa1150820:CDS |
| ATCACACGAGACTCCGAGAT+GGG | 0.589789 | 7_4:-34667458 | None:intergenic |
| TGTGGCTGCTGCATGGATGT+CGG | 0.602873 | 7_4:+34667792 | Msa1150820:CDS |
| AATCACACGAGACTCCGAGA+TGG | 0.605388 | 7_4:-34667459 | None:intergenic |
| TATATCTATACAGACAAATG+AGG | 0.608543 | 7_4:+34667104 | Msa1150820:five_prime_UTR |
| TAACAACCATCCAATAGTCA+AGG | 0.609813 | 7_4:+34668035 | Msa1150820:CDS |
| TGATAAGAAAGAACGCGAGA+AGG | 0.610372 | 7_4:+34667825 | Msa1150820:CDS |
| ACAGACAAATGAGGCTGACG+CGG | 0.631677 | 7_4:+34667113 | Msa1150820:five_prime_UTR |
| GTCCAAGTTCATCGATGACA+AGG | 0.633494 | 7_4:+34667562 | Msa1150820:CDS |
| ATACAATCCAGTTTACAGGA+TGG | 0.639625 | 7_4:+34667409 | Msa1150820:CDS |
| TCATAATGGAAATCCCATCT+CGG | 0.646463 | 7_4:+34667445 | Msa1150820:CDS |
| AGAGTTGCAGTTGTTCACAA+GGG | 0.660025 | 7_4:+34667975 | Msa1150820:CDS |
| AAAGTCAAGAGAGTGTTGCA+AGG | 0.691124 | 7_4:+34667230 | Msa1150820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTTTGTTTTTGTTCTTT+TGG | + | chr7_4:34667045-34667064 | Msa1150820:five_prime_UTR | 20.0% |
| !!! | CCTCTAAAACTTTTATATTT+CGG | + | chr7_4:34667169-34667188 | Msa1150820:five_prime_UTR | 20.0% |
| !! | AAATATTCGGAAGAAAAATT+GGG | + | chr7_4:34667362-34667381 | Msa1150820:CDS | 20.0% |
| !! | TGTTTGAATTTCATTTCAAA+TGG | + | chr7_4:34668145-34668164 | Msa1150820:three_prime_UTR | 20.0% |
| !!! | GTTGAAAATGACAATATTTT+AGG | - | chr7_4:34668206-34668225 | None:intergenic | 20.0% |
| !!! | ATACTTTGTTTTTGTTCTTT+TGG | + | chr7_4:34667045-34667064 | Msa1150820:five_prime_UTR | 20.0% |
| !!! | CCTCTAAAACTTTTATATTT+CGG | + | chr7_4:34667169-34667188 | Msa1150820:five_prime_UTR | 20.0% |
| !! | AAATATTCGGAAGAAAAATT+GGG | + | chr7_4:34667362-34667381 | Msa1150820:CDS | 20.0% |
| !! | TGTTTGAATTTCATTTCAAA+TGG | + | chr7_4:34668145-34668164 | Msa1150820:three_prime_UTR | 20.0% |
| !!! | GTTGAAAATGACAATATTTT+AGG | - | chr7_4:34668206-34668225 | None:intergenic | 20.0% |
| ! | TATATCTATACAGACAAATG+AGG | + | chr7_4:34667104-34667123 | Msa1150820:five_prime_UTR | 25.0% |
| !!! | CCGAAATATAAAAGTTTTAG+AGG | - | chr7_4:34667172-34667191 | None:intergenic | 25.0% |
| ! | TTTGAACTCTAATGACAAAT+GGG | - | chr7_4:34667313-34667332 | None:intergenic | 25.0% |
| ! | ATTTGAACTCTAATGACAAA+TGG | - | chr7_4:34667314-34667333 | None:intergenic | 25.0% |
| ! | CAAATATTCGGAAGAAAAAT+TGG | + | chr7_4:34667361-34667380 | Msa1150820:CDS | 25.0% |
| ! | TTAAATACAATCCAGTTTAC+AGG | + | chr7_4:34667405-34667424 | Msa1150820:CDS | 25.0% |
| ! | TTTCCATTATGAACAAAAAC+AGG | - | chr7_4:34667437-34667456 | None:intergenic | 25.0% |
| ! | TTTCTTGAGAATGAATTGAA+GGG | + | chr7_4:34667877-34667896 | Msa1150820:CDS | 25.0% |
| ! | AATTTCCAAAGCTATACAAA+TGG | + | chr7_4:34668001-34668020 | Msa1150820:CDS | 25.0% |
| ! | AACAAAAACAAAGTATAACG+TGG | - | chr7_4:34667041-34667060 | None:intergenic | 25.0% |
| ! | TATATCTATACAGACAAATG+AGG | + | chr7_4:34667104-34667123 | Msa1150820:five_prime_UTR | 25.0% |
| !!! | CCGAAATATAAAAGTTTTAG+AGG | - | chr7_4:34667172-34667191 | None:intergenic | 25.0% |
| ! | TTTGAACTCTAATGACAAAT+GGG | - | chr7_4:34667313-34667332 | None:intergenic | 25.0% |
| ! | ATTTGAACTCTAATGACAAA+TGG | - | chr7_4:34667314-34667333 | None:intergenic | 25.0% |
| ! | CAAATATTCGGAAGAAAAAT+TGG | + | chr7_4:34667361-34667380 | Msa1150820:CDS | 25.0% |
| ! | TTAAATACAATCCAGTTTAC+AGG | + | chr7_4:34667405-34667424 | Msa1150820:CDS | 25.0% |
| ! | TTTCCATTATGAACAAAAAC+AGG | - | chr7_4:34667437-34667456 | None:intergenic | 25.0% |
| ! | TTTCTTGAGAATGAATTGAA+GGG | + | chr7_4:34667877-34667896 | Msa1150820:CDS | 25.0% |
| ! | AATTTCCAAAGCTATACAAA+TGG | + | chr7_4:34668001-34668020 | Msa1150820:CDS | 25.0% |
| !! | GGGTGTTGAATACAAATATT+CGG | + | chr7_4:34667349-34667368 | Msa1150820:CDS | 30.0% |
| !!! | GTTCCTGTTTTTGTTCATAA+TGG | + | chr7_4:34667431-34667450 | Msa1150820:CDS | 30.0% |
| TTGAGTATATTGATGAGACT+TGG | + | chr7_4:34667483-34667502 | Msa1150820:CDS | 30.0% | |
| ! | TAATTTGTGAAATCAGTGTG+TGG | + | chr7_4:34667774-34667793 | Msa1150820:intron | 30.0% |
| GTTTCTTGAGAATGAATTGA+AGG | + | chr7_4:34667876-34667895 | Msa1150820:CDS | 30.0% | |
| GAATTGAAGGGAAAATTCTT+TGG | + | chr7_4:34667889-34667908 | Msa1150820:CDS | 30.0% | |
| TTACTCCATTTGTATAGCTT+TGG | - | chr7_4:34668009-34668028 | None:intergenic | 30.0% | |
| TAATTTCCTTGACTATTGGA+TGG | - | chr7_4:34668044-34668063 | None:intergenic | 30.0% | |
| ! | GCAAATTGTTGATCTTTTGA+AGG | - | chr7_4:34668069-34668088 | None:intergenic | 30.0% |
| CTGCATCAAAATAGAGTTAT+TGG | + | chr7_4:34668121-34668140 | Msa1150820:exon | 30.0% | |
| !! | GGGTGTTGAATACAAATATT+CGG | + | chr7_4:34667349-34667368 | Msa1150820:CDS | 30.0% |
| !!! | GTTCCTGTTTTTGTTCATAA+TGG | + | chr7_4:34667431-34667450 | Msa1150820:CDS | 30.0% |
| TTGAGTATATTGATGAGACT+TGG | + | chr7_4:34667483-34667502 | Msa1150820:CDS | 30.0% | |
| ! | TAATTTGTGAAATCAGTGTG+TGG | + | chr7_4:34667774-34667793 | Msa1150820:intron | 30.0% |
| GTTTCTTGAGAATGAATTGA+AGG | + | chr7_4:34667876-34667895 | Msa1150820:CDS | 30.0% | |
| GAATTGAAGGGAAAATTCTT+TGG | + | chr7_4:34667889-34667908 | Msa1150820:CDS | 30.0% | |
| TTACTCCATTTGTATAGCTT+TGG | - | chr7_4:34668009-34668028 | None:intergenic | 30.0% | |
| TAATTTCCTTGACTATTGGA+TGG | - | chr7_4:34668044-34668063 | None:intergenic | 30.0% | |
| ! | GCAAATTGTTGATCTTTTGA+AGG | - | chr7_4:34668069-34668088 | None:intergenic | 30.0% |
| CTGCATCAAAATAGAGTTAT+TGG | + | chr7_4:34668121-34668140 | Msa1150820:exon | 30.0% | |
| ATACAATCCAGTTTACAGGA+TGG | + | chr7_4:34667409-34667428 | Msa1150820:CDS | 35.0% | |
| ! | TCATAATGGAAATCCCATCT+CGG | + | chr7_4:34667445-34667464 | Msa1150820:CDS | 35.0% |
| !! | GCTCTTTGATAACGATCATT+CGG | - | chr7_4:34667527-34667546 | None:intergenic | 35.0% |
| TGATCGTTATCAAAGAGCTT+TGG | + | chr7_4:34667529-34667548 | Msa1150820:CDS | 35.0% | |
| ACAGATGTCATAATAGACAC+TGG | - | chr7_4:34667692-34667711 | None:intergenic | 35.0% | |
| TTGAAGGGAAAATTCTTTGG+AGG | + | chr7_4:34667892-34667911 | Msa1150820:CDS | 35.0% | |
| ! | CTGCTACTTCTTGGAATAAA+GGG | - | chr7_4:34667957-34667976 | None:intergenic | 35.0% |
| ! | TCTGCTACTTCTTGGAATAA+AGG | - | chr7_4:34667958-34667977 | None:intergenic | 35.0% |
| TAACAACCATCCAATAGTCA+AGG | + | chr7_4:34668035-34668054 | Msa1150820:CDS | 35.0% | |
| GGCATAATTTCCTTGACTAT+TGG | - | chr7_4:34668048-34668067 | None:intergenic | 35.0% | |
| ATACAATCCAGTTTACAGGA+TGG | + | chr7_4:34667409-34667428 | Msa1150820:CDS | 35.0% | |
| ! | TCATAATGGAAATCCCATCT+CGG | + | chr7_4:34667445-34667464 | Msa1150820:CDS | 35.0% |
| !! | GCTCTTTGATAACGATCATT+CGG | - | chr7_4:34667527-34667546 | None:intergenic | 35.0% |
| TGATCGTTATCAAAGAGCTT+TGG | + | chr7_4:34667529-34667548 | Msa1150820:CDS | 35.0% | |
| ACAGATGTCATAATAGACAC+TGG | - | chr7_4:34667692-34667711 | None:intergenic | 35.0% | |
| TTGAAGGGAAAATTCTTTGG+AGG | + | chr7_4:34667892-34667911 | Msa1150820:CDS | 35.0% | |
| ! | CTGCTACTTCTTGGAATAAA+GGG | - | chr7_4:34667957-34667976 | None:intergenic | 35.0% |
| ! | TCTGCTACTTCTTGGAATAA+AGG | - | chr7_4:34667958-34667977 | None:intergenic | 35.0% |
| TAACAACCATCCAATAGTCA+AGG | + | chr7_4:34668035-34668054 | Msa1150820:CDS | 35.0% | |
| GGCATAATTTCCTTGACTAT+TGG | - | chr7_4:34668048-34668067 | None:intergenic | 35.0% | |
| TTGCAACACTCTCTTGACTT+TGG | - | chr7_4:34667231-34667250 | None:intergenic | 40.0% | |
| !! | AAAGTCAAGAGAGTGTTGCA+AGG | + | chr7_4:34667230-34667249 | Msa1150820:CDS | 40.0% |
| ! | TGAGGAAGAAGTGAAGCTTT+TGG | + | chr7_4:34667274-34667293 | Msa1150820:CDS | 40.0% |
| ! | GAGGAAGAAGTGAAGCTTTT+GGG | + | chr7_4:34667275-34667294 | Msa1150820:CDS | 40.0% |
| CATTAGAGTTCAAATTGCGC+TGG | + | chr7_4:34667319-34667338 | Msa1150820:CDS | 40.0% | |
| TCAAATTGCGCTGGAATTGA+AGG | + | chr7_4:34667328-34667347 | Msa1150820:CDS | 40.0% | |
| CAAATTGCGCTGGAATTGAA+GGG | + | chr7_4:34667329-34667348 | Msa1150820:CDS | 40.0% | |
| TAACGATCATTCGGCAAGAT+AGG | - | chr7_4:34667518-34667537 | None:intergenic | 40.0% | |
| TACCTTGTCATCGATGAACT+TGG | - | chr7_4:34667567-34667586 | None:intergenic | 40.0% | |
| ! | GTATTGACGCTTCAGATTGA+AGG | + | chr7_4:34667644-34667663 | Msa1150820:intron | 40.0% |
| CTTCAGATTGAAGGAATGTC+TGG | + | chr7_4:34667653-34667672 | Msa1150820:intron | 40.0% | |
| TTCTCGCGTTCTTTCTTATC+AGG | - | chr7_4:34667826-34667845 | None:intergenic | 40.0% | |
| TGATAAGAAAGAACGCGAGA+AGG | + | chr7_4:34667825-34667844 | Msa1150820:CDS | 40.0% | |
| ! | TTCTTTGGAGGAGAAGAGAT+TGG | + | chr7_4:34667904-34667923 | Msa1150820:CDS | 40.0% |
| AGAGTTGCAGTTGTTCACAA+GGG | + | chr7_4:34667975-34667994 | Msa1150820:CDS | 40.0% | |
| TTGCAACACTCTCTTGACTT+TGG | - | chr7_4:34667231-34667250 | None:intergenic | 40.0% | |
| !! | AAAGTCAAGAGAGTGTTGCA+AGG | + | chr7_4:34667230-34667249 | Msa1150820:CDS | 40.0% |
| ! | TGAGGAAGAAGTGAAGCTTT+TGG | + | chr7_4:34667274-34667293 | Msa1150820:CDS | 40.0% |
| ! | GAGGAAGAAGTGAAGCTTTT+GGG | + | chr7_4:34667275-34667294 | Msa1150820:CDS | 40.0% |
| CATTAGAGTTCAAATTGCGC+TGG | + | chr7_4:34667319-34667338 | Msa1150820:CDS | 40.0% | |
| TCAAATTGCGCTGGAATTGA+AGG | + | chr7_4:34667328-34667347 | Msa1150820:CDS | 40.0% | |
| CAAATTGCGCTGGAATTGAA+GGG | + | chr7_4:34667329-34667348 | Msa1150820:CDS | 40.0% | |
| TAACGATCATTCGGCAAGAT+AGG | - | chr7_4:34667518-34667537 | None:intergenic | 40.0% | |
| TACCTTGTCATCGATGAACT+TGG | - | chr7_4:34667567-34667586 | None:intergenic | 40.0% | |
| ! | GTATTGACGCTTCAGATTGA+AGG | + | chr7_4:34667644-34667663 | Msa1150820:intron | 40.0% |
| CTTCAGATTGAAGGAATGTC+TGG | + | chr7_4:34667653-34667672 | Msa1150820:intron | 40.0% | |
| TTCTCGCGTTCTTTCTTATC+AGG | - | chr7_4:34667826-34667845 | None:intergenic | 40.0% | |
| TGATAAGAAAGAACGCGAGA+AGG | + | chr7_4:34667825-34667844 | Msa1150820:CDS | 40.0% | |
| ! | TTCTTTGGAGGAGAAGAGAT+TGG | + | chr7_4:34667904-34667923 | Msa1150820:CDS | 40.0% |
| AGAGTTGCAGTTGTTCACAA+GGG | + | chr7_4:34667975-34667994 | Msa1150820:CDS | 40.0% | |
| !! | AAGAGAGTGTTGCAAGGCTA+TGG | + | chr7_4:34667236-34667255 | Msa1150820:CDS | 45.0% |
| !!! | AGTGAAGCTTTTGGGTTCTG+TGG | + | chr7_4:34667283-34667302 | Msa1150820:CDS | 45.0% |
| !!! | GTGAAGCTTTTGGGTTCTGT+GGG | + | chr7_4:34667284-34667303 | Msa1150820:CDS | 45.0% |
| ACAGGAACCATCCTGTAAAC+TGG | - | chr7_4:34667419-34667438 | None:intergenic | 45.0% | |
| ! | AAAGAGCTTTGGCTCGTTTC+TGG | + | chr7_4:34667540-34667559 | Msa1150820:CDS | 45.0% |
| GTCCAAGTTCATCGATGACA+AGG | + | chr7_4:34667562-34667581 | Msa1150820:CDS | 45.0% | |
| ! | ACTGCAACTCTGCTACTTCT+TGG | - | chr7_4:34667966-34667985 | None:intergenic | 45.0% |
| CAGAGTTGCAGTTGTTCACA+AGG | + | chr7_4:34667974-34667993 | Msa1150820:CDS | 45.0% | |
| !!! | TCTATTTTGATGCAGCAGCG+AGG | - | chr7_4:34668116-34668135 | None:intergenic | 45.0% |
| !! | AAGAGAGTGTTGCAAGGCTA+TGG | + | chr7_4:34667236-34667255 | Msa1150820:CDS | 45.0% |
| !!! | AGTGAAGCTTTTGGGTTCTG+TGG | + | chr7_4:34667283-34667302 | Msa1150820:CDS | 45.0% |
| !!! | GTGAAGCTTTTGGGTTCTGT+GGG | + | chr7_4:34667284-34667303 | Msa1150820:CDS | 45.0% |
| ACAGGAACCATCCTGTAAAC+TGG | - | chr7_4:34667419-34667438 | None:intergenic | 45.0% | |
| ! | AAAGAGCTTTGGCTCGTTTC+TGG | + | chr7_4:34667540-34667559 | Msa1150820:CDS | 45.0% |
| GTCCAAGTTCATCGATGACA+AGG | + | chr7_4:34667562-34667581 | Msa1150820:CDS | 45.0% | |
| ! | ACTGCAACTCTGCTACTTCT+TGG | - | chr7_4:34667966-34667985 | None:intergenic | 45.0% |
| CAGAGTTGCAGTTGTTCACA+AGG | + | chr7_4:34667974-34667993 | Msa1150820:CDS | 45.0% | |
| !!! | TCTATTTTGATGCAGCAGCG+AGG | - | chr7_4:34668116-34668135 | None:intergenic | 45.0% |
| ACAGACAAATGAGGCTGACG+CGG | + | chr7_4:34667113-34667132 | Msa1150820:five_prime_UTR | 50.0% | |
| GTTGCAAGGCTATGGTGTGA+TGG | + | chr7_4:34667244-34667263 | Msa1150820:CDS | 50.0% | |
| ATCACACGAGACTCCGAGAT+GGG | - | chr7_4:34667461-34667480 | None:intergenic | 50.0% | |
| AATCACACGAGACTCCGAGA+TGG | - | chr7_4:34667462-34667481 | None:intergenic | 50.0% | |
| GGCTAGCGAGGAACTATTGA+AGG | + | chr7_4:34667846-34667865 | Msa1150820:CDS | 50.0% | |
| ACAGACAAATGAGGCTGACG+CGG | + | chr7_4:34667113-34667132 | Msa1150820:five_prime_UTR | 50.0% | |
| GTTGCAAGGCTATGGTGTGA+TGG | + | chr7_4:34667244-34667263 | Msa1150820:CDS | 50.0% | |
| ATCACACGAGACTCCGAGAT+GGG | - | chr7_4:34667461-34667480 | None:intergenic | 50.0% | |
| AATCACACGAGACTCCGAGA+TGG | - | chr7_4:34667462-34667481 | None:intergenic | 50.0% | |
| GGCTAGCGAGGAACTATTGA+AGG | + | chr7_4:34667846-34667865 | Msa1150820:CDS | 50.0% | |
| TGGTGTGATGGCTGCATCTG+AGG | + | chr7_4:34667256-34667275 | Msa1150820:CDS | 55.0% | |
| ATCAGTGTGTGGCTGCTGCA+TGG | + | chr7_4:34667785-34667804 | Msa1150820:intron | 55.0% | |
| TGTGGCTGCTGCATGGATGT+CGG | + | chr7_4:34667792-34667811 | Msa1150820:CDS | 55.0% | |
| TGGTGTGATGGCTGCATCTG+AGG | + | chr7_4:34667256-34667275 | Msa1150820:CDS | 55.0% | |
| ATCAGTGTGTGGCTGCTGCA+TGG | + | chr7_4:34667785-34667804 | Msa1150820:intron | 55.0% | |
| TGTGGCTGCTGCATGGATGT+CGG | + | chr7_4:34667792-34667811 | Msa1150820:CDS | 55.0% | |
| AGAACGCGAGAAGGCTAGCG+AGG | + | chr7_4:34667834-34667853 | Msa1150820:CDS | 60.0% | |
| AGAACGCGAGAAGGCTAGCG+AGG | + | chr7_4:34667834-34667853 | Msa1150820:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 34667039 | 34668251 | 34667039 | ID=Msa1150820;Name=Msa1150820 |
| chr7_4 | mRNA | 34667039 | 34668251 | 34667039 | ID=Msa1150820-mRNA-1;Parent=Msa1150820;Name=Msa1150820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=170|1|1|1|1|1|2|117|239 |
| chr7_4 | exon | 34667039 | 34667583 | 34667039 | ID=Msa1150820-mRNA-1:exon:8205;Parent=Msa1150820-mRNA-1 |
| chr7_4 | exon | 34667790 | 34668251 | 34667790 | ID=Msa1150820-mRNA-1:exon:8206;Parent=Msa1150820-mRNA-1 |
| chr7_4 | five_prime_UTR | 34667039 | 34667208 | 34667039 | ID=Msa1150820-mRNA-1:five_prime_utr;Parent=Msa1150820-mRNA-1 |
| chr7_4 | CDS | 34667209 | 34667583 | 34667209 | ID=Msa1150820-mRNA-1:cds;Parent=Msa1150820-mRNA-1 |
| chr7_4 | CDS | 34667790 | 34668134 | 34667790 | ID=Msa1150820-mRNA-1:cds;Parent=Msa1150820-mRNA-1 |
| chr7_4 | three_prime_UTR | 34668135 | 34668251 | 34668135 | ID=Msa1150820-mRNA-1:three_prime_utr;Parent=Msa1150820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
