Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153280 | XP_003623468.1 | 98.000 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 7.69e-64 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153280 | G7KV21 | 98.000 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 3.67e-64 | 198 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077010 | Msa1153280 | 0.819075 | 1.404996e-52 | -8.615850e-47 |
| Msa0113130 | Msa1153280 | 0.808192 | 3.494327e-50 | -8.615850e-47 |
| Msa0113240 | Msa1153280 | 0.811003 | 8.699991e-51 | -8.615850e-47 |
| Msa0633570 | Msa1153280 | 0.803224 | 3.860546e-49 | -8.615850e-47 |
| Msa0166750 | Msa1153280 | 0.803870 | 2.836106e-49 | -8.615850e-47 |
| Msa1025940 | Msa1153280 | 0.806686 | 7.291080e-50 | -8.615850e-47 |
| Msa1125500 | Msa1153280 | 0.836471 | 9.178131e-57 | -8.615850e-47 |
| Msa1125580 | Msa1153280 | 0.831063 | 2.064237e-55 | -8.615850e-47 |
| Msa1153280 | Msa1462860 | 0.822370 | 2.457059e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153280 | MtrunA17_Chr0c32g0494171 | 98.000 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 7.07e-68 | 198 |
| Msa1153280 | MtrunA17_Chr7g0243961 | 98.000 | 100 | 2 | 0 | 1 | 100 | 1 | 100 | 7.07e-68 | 198 |
| Msa1153280 | MtrunA17_Chr3g0114281 | 61.905 | 84 | 32 | 0 | 12 | 95 | 66 | 149 | 1.27e-35 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153280 | AT2G38450.1 | 79.762 | 84 | 16 | 1 | 12 | 94 | 53 | 136 | 1.75e-45 | 143 |
| Msa1153280 | AT5G05360.1 | 65.556 | 90 | 31 | 0 | 6 | 95 | 71 | 160 | 7.59e-41 | 132 |
| Msa1153280 | AT5G05360.2 | 64.634 | 82 | 29 | 0 | 6 | 87 | 71 | 152 | 7.02e-36 | 119 |
| Msa1153280 | AT2G38450.2 | 76.471 | 51 | 11 | 1 | 12 | 61 | 53 | 103 | 2.38e-23 | 87.0 |
Find 55 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCACCTTTCAGAATTT+AGG | 0.137030 | 7_4:+39676760 | None:intergenic |
| CCATTTGCTGAAATTGAAAT+TGG | 0.176976 | 7_4:-39679150 | Msa1153280:five_prime_UTR |
| ACTAAACAAATTTCGTAAAT+TGG | 0.182347 | 7_4:-39679460 | Msa1153280:five_prime_UTR |
| ATTCTTAACCAGACTAAATT+TGG | 0.185003 | 7_4:-39676790 | Msa1153280:exon |
| TTGTGTGAAACGTTGGTTTA+AGG | 0.206492 | 7_4:-39679056 | Msa1153280:CDS |
| CGTTTGTCTGGCTGGCTTCA+TGG | 0.221109 | 7_4:-39674360 | Msa1153280:three_prime_UTR |
| AACTCACCTTTCAGAATTTA+GGG | 0.248330 | 7_4:+39676761 | None:intergenic |
| GTTGGTTTAAGGATACTCTT+AGG | 0.251388 | 7_4:-39679045 | Msa1153280:CDS |
| TGATGTTAATATGCAGATTT+TGG | 0.257808 | 7_4:-39679008 | Msa1153280:CDS |
| TTGAAATTGGAAGGGATATA+TGG | 0.267428 | 7_4:-39679137 | Msa1153280:exon |
| CCAATTTCAATTTCAGCAAA+TGG | 0.305590 | 7_4:+39679150 | None:intergenic |
| GGATATATGGAGAGCAGTAT+AGG | 0.337976 | 7_4:-39679124 | Msa1153280:exon |
| ACTCGTTTCGTTTGTCTGGC+TGG | 0.345699 | 7_4:-39674368 | Msa1153280:three_prime_UTR |
| ATAGACTCGTTTCGTTTGTC+TGG | 0.347893 | 7_4:-39674372 | Msa1153280:three_prime_UTR |
| GAATTCTTTCTCACTTTCCT+TGG | 0.364041 | 7_4:-39674521 | Msa1153280:three_prime_UTR |
| CGAGGGTTAGGTCTTCAGTT+TGG | 0.387633 | 7_4:-39676965 | Msa1153280:CDS |
| GATATATGGAGAGCAGTATA+GGG | 0.394996 | 7_4:-39679123 | Msa1153280:exon |
| TCTGCCACAACCCCTGATAA+AGG | 0.396968 | 7_4:+39679079 | None:intergenic |
| CAATTTCAATTTCAGCAAAT+GGG | 0.407593 | 7_4:+39679151 | None:intergenic |
| TGACAAAAGCATCGAGGGTT+AGG | 0.410197 | 7_4:-39676977 | Msa1153280:CDS |
| ATCTTCAAAGAACAACAAAA+AGG | 0.422643 | 7_4:-39679284 | Msa1153280:intron |
| GGATGGAACCAAATTTAGTC+TGG | 0.438861 | 7_4:+39676782 | None:intergenic |
| AGGTCTTCAGTTTGGAAAGT+TGG | 0.443829 | 7_4:-39676957 | Msa1153280:CDS |
| GTTGGTCAGATGTATTATAG+TGG | 0.448023 | 7_4:-39678986 | Msa1153280:CDS |
| TGCAGTTTAGAGAGAGAAAG+AGG | 0.461079 | 7_4:+39679364 | None:intergenic |
| TTGCTGAAATTGAAATTGGA+AGG | 0.463912 | 7_4:-39679146 | Msa1153280:five_prime_UTR |
| GCTTCTTCATAGCCACCATA+TGG | 0.470491 | 7_4:-39674674 | Msa1153280:three_prime_UTR |
| ATTTGAATGGAGAATTAAGA+AGG | 0.490719 | 7_4:+39679336 | None:intergenic |
| TTGGTTTAAGGATACTCTTA+GGG | 0.499307 | 7_4:-39679044 | Msa1153280:CDS |
| GTATAGGGAAAGATGGCAAC+GGG | 0.500664 | 7_4:-39679108 | Msa1153280:CDS |
| TTTGAATGGAGAATTAAGAA+GGG | 0.503374 | 7_4:+39679337 | None:intergenic |
| TAACTGAAAGAACATCCATA+TGG | 0.524519 | 7_4:+39674659 | None:intergenic |
| TGCTGAAATTGAAATTGGAA+GGG | 0.527764 | 7_4:-39679145 | Msa1153280:five_prime_UTR |
| ACTCTTAGGGAGGCTAAAGC+TGG | 0.533054 | 7_4:-39679031 | Msa1153280:CDS |
| GAGAGCAGTATAGGGAAAGA+TGG | 0.541345 | 7_4:-39679115 | Msa1153280:CDS |
| CAGATGTATTATAGTGGCTA+TGG | 0.541971 | 7_4:-39678980 | Msa1153280:CDS |
| CACCTTTCAGAATTTAGGGA+TGG | 0.544378 | 7_4:+39676765 | None:intergenic |
| AAAGTTGGAGATAAGCGTCC+AGG | 0.548549 | 7_4:-39676942 | Msa1153280:intron |
| TGGGAATGAAGGGAAAACTT+TGG | 0.550885 | 7_4:-39677001 | Msa1153280:intron |
| AGAGAGAAAGAGGCAGCTAT+CGG | 0.565552 | 7_4:+39679374 | None:intergenic |
| AGAACATGGATGGATTTGAA+TGG | 0.576276 | 7_4:+39679323 | None:intergenic |
| TTCCATCCCTAAATTCTGAA+AGG | 0.580447 | 7_4:-39676767 | Msa1153280:intron |
| TGGCAGATTGTGTGAAACGT+TGG | 0.602973 | 7_4:-39679063 | Msa1153280:CDS |
| GTTTAAGGATACTCTTAGGG+AGG | 0.610668 | 7_4:-39679041 | Msa1153280:CDS |
| TGTTATATGAAGAACATGGA+TGG | 0.612993 | 7_4:+39679313 | None:intergenic |
| CACATCTTGCAAATAGAACA+AGG | 0.613506 | 7_4:-39674490 | Msa1153280:three_prime_UTR |
| TTGAATGGAGAATTAAGAAG+GGG | 0.614053 | 7_4:+39679338 | None:intergenic |
| TTGGCTGACAAAAGCATCGA+GGG | 0.617055 | 7_4:-39676982 | Msa1153280:CDS |
| CTGAAAGAACATCCATATGG+TGG | 0.632519 | 7_4:+39674662 | None:intergenic |
| AGTATAGGGAAAGATGGCAA+CGG | 0.632557 | 7_4:-39679109 | Msa1153280:CDS |
| TGTTGCAAAAGATGCTCAGA+AGG | 0.654531 | 7_4:-39678957 | Msa1153280:intron |
| CAAGATGTGATGTCATGCCA+AGG | 0.684942 | 7_4:+39674504 | None:intergenic |
| TTTGGCTGACAAAAGCATCG+AGG | 0.704862 | 7_4:-39676983 | Msa1153280:CDS |
| TGACTCTGATGAATCAAACG+AGG | 0.712793 | 7_4:-39676813 | Msa1153280:CDS |
| ATGATGTTATATGAAGAACA+TGG | 0.733783 | 7_4:+39679309 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTATGTAACAAATTT+TGG | - | chr7_4:39674663-39674682 | Msa1153280:three_prime_UTR | 10.0% |
| !!! | AAATTTATGTAACAAATTTT+GGG | - | chr7_4:39674664-39674683 | Msa1153280:three_prime_UTR | 10.0% |
| !!! | AAACACAATTTTTTAAAAAA+AGG | + | chr7_4:39675471-39675490 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAGTTATCATTA+CGG | + | chr7_4:39676016-39676035 | None:intergenic | 10.0% |
| !! | ACATTAAAAATAAAATAATG+CGG | - | chr7_4:39676067-39676086 | Msa1153280:intron | 10.0% |
| !! | ATAAAAGGATATTTATTAAT+GGG | + | chr7_4:39677522-39677541 | None:intergenic | 10.0% |
| !! | AATAAAAGGATATTTATTAA+TGG | + | chr7_4:39677523-39677542 | None:intergenic | 10.0% |
| !! | TATGAAAATGACAATAAATT+TGG | - | chr7_4:39675167-39675186 | Msa1153280:intron | 15.0% |
| !!! | TATGATATATAAAAGTGTTT+TGG | + | chr7_4:39675856-39675875 | None:intergenic | 15.0% |
| !!! | AACACTTTTATATATCATAT+CGG | - | chr7_4:39675857-39675876 | Msa1153280:intron | 15.0% |
| !!! | TATCTTTTAATTTATGTTTC+TGG | - | chr7_4:39676216-39676235 | Msa1153280:intron | 15.0% |
| !!! | ACATGGTAATTTTTTTAAAA+AGG | + | chr7_4:39676473-39676492 | None:intergenic | 15.0% |
| !!! | TTTAATTTATATATCAGAAG+TGG | - | chr7_4:39676689-39676708 | Msa1153280:intron | 15.0% |
| !! | TATTTGAATATATAGAGTAA+TGG | - | chr7_4:39676763-39676782 | Msa1153280:intron | 15.0% |
| !!! | AATTTTGTATCTATGATTTT+GGG | + | chr7_4:39677810-39677829 | None:intergenic | 15.0% |
| !!! | TAATTTTGTATCTATGATTT+TGG | + | chr7_4:39677241-39677260 | None:intergenic | 15.0% |
| !! | AAATCATAGATACAAAATTA+TGG | - | chr7_4:39677241-39677260 | Msa1153280:intron | 15.0% |
| !! | TTATGGCATATTATAAAATA+CGG | - | chr7_4:39677258-39677277 | Msa1153280:intron | 15.0% |
| !! | TGCAATATTATAATTAGAAA+CGG | - | chr7_4:39677546-39677565 | Msa1153280:intron | 15.0% |
| !! | TTATCTAACTATAAAACTTA+AGG | + | chr7_4:39678518-39678537 | None:intergenic | 15.0% |
| !!! | TTCAATAATTGATATTTTCT+AGG | - | chr7_4:39679013-39679032 | Msa1153280:CDS | 15.0% |
| !!! | TCAATAATTGATATTTTCTA+GGG | - | chr7_4:39679014-39679033 | Msa1153280:CDS | 15.0% |
| !!! | TCATTGATTGATAAAAAAAA+TGG | + | chr7_4:39679284-39679303 | None:intergenic | 15.0% |
| !! | ACTAAACAAATTTCGTAAAT+TGG | - | chr7_4:39674421-39674440 | Msa1153280:three_prime_UTR | 20.0% |
| !!! | AAAATTTTCACAATCTCAAT+TGG | - | chr7_4:39674622-39674641 | Msa1153280:three_prime_UTR | 20.0% |
| !!! | AAATTTTCACAATCTCAATT+GGG | - | chr7_4:39674623-39674642 | Msa1153280:three_prime_UTR | 20.0% |
| !!! | ATTTTGGGATTTTTTTTTTC+AGG | - | chr7_4:39674679-39674698 | Msa1153280:three_prime_UTR | 20.0% |
| !!! | TTTTCTTGTTTTCATGTTTT+TGG | - | chr7_4:39674959-39674978 | Msa1153280:intron | 20.0% |
| !! | TATTTGATTGTTTGTTTGTT+TGG | - | chr7_4:39675020-39675039 | Msa1153280:intron | 20.0% |
| !! | AATATTGCATGATAATAGTT+CGG | - | chr7_4:39675088-39675107 | Msa1153280:intron | 20.0% |
| !! | TAAAGAAATGAATAAAACCT+AGG | - | chr7_4:39675129-39675148 | Msa1153280:intron | 20.0% |
| !!! | ACACTTTTATATATCATATC+GGG | - | chr7_4:39675858-39675877 | Msa1153280:intron | 20.0% |
| !! | ATTAAATTCACATAAATGTG+TGG | + | chr7_4:39676506-39676525 | None:intergenic | 20.0% |
| !! | AGTTTCTATTGTGAAATATA+TGG | - | chr7_4:39676720-39676739 | Msa1153280:intron | 20.0% |
| !! | TATTGTGAAATATATGGTTA+TGG | - | chr7_4:39676726-39676745 | Msa1153280:intron | 20.0% |
| !!! | GCATTTTTATTAGGATATAA+TGG | - | chr7_4:39677036-39677055 | Msa1153280:intron | 20.0% |
| !! | AAAAATTGGGATAAAAGATT+GGG | + | chr7_4:39677181-39677200 | None:intergenic | 20.0% |
| !! | AAAAAATTGGGATAAAAGAT+TGG | + | chr7_4:39677182-39677201 | None:intergenic | 20.0% |
| !! | ACCAATCATCTAAAAAAATT+GGG | + | chr7_4:39677194-39677213 | None:intergenic | 20.0% |
| !! | ATAATATTGCACTGAATAAA+AGG | + | chr7_4:39677537-39677556 | None:intergenic | 20.0% |
| !! | GCAATATTATAATTAGAAAC+GGG | - | chr7_4:39677547-39677566 | Msa1153280:intron | 20.0% |
| !! | AAATCATAGATACAAAATTG+TGG | + | chr7_4:39677809-39677828 | None:intergenic | 20.0% |
| !! | ATCCAAATACTAAGAAAAAA+GGG | + | chr7_4:39677907-39677926 | None:intergenic | 20.0% |
| !! | AATCCAAATACTAAGAAAAA+AGG | + | chr7_4:39677908-39677927 | None:intergenic | 20.0% |
| !!! | TAAATTTTACCATTCACAAA+TGG | - | chr7_4:39678687-39678706 | Msa1153280:intron | 20.0% |
| !!! | ATACTTGATTAAAAGTGTAA+TGG | - | chr7_4:39678798-39678817 | Msa1153280:intron | 20.0% |
| !! | TTCAACCTGAAAATAAAAAA+TGG | + | chr7_4:39679118-39679137 | None:intergenic | 20.0% |
| !! | CATATACCTACAAAAAAAAA+CGG | + | chr7_4:39679171-39679190 | None:intergenic | 20.0% |
| !! | GAGTCTATAAAAATGAAAAA+GGG | + | chr7_4:39679497-39679516 | None:intergenic | 20.0% |
| ! | TTTGAATGGAGAATTAAGAA+GGG | + | chr7_4:39674547-39674566 | None:intergenic | 25.0% |
| ! | ATTTGAATGGAGAATTAAGA+AGG | + | chr7_4:39674548-39674567 | None:intergenic | 25.0% |
| ! | ATGATGTTATATGAAGAACA+TGG | + | chr7_4:39674575-39674594 | None:intergenic | 25.0% |
| ! | ATCTTCAAAGAACAACAAAA+AGG | - | chr7_4:39674597-39674616 | Msa1153280:three_prime_UTR | 25.0% |
| ! | CAATTTCAATTTCAGCAAAT+GGG | + | chr7_4:39674733-39674752 | None:intergenic | 25.0% |
| !! | TGATGTTAATATGCAGATTT+TGG | - | chr7_4:39674873-39674892 | Msa1153280:intron | 25.0% |
| ! | TGTTATTAATCAACTTGCAT+TGG | - | chr7_4:39674996-39675015 | Msa1153280:intron | 25.0% |
| !!! | TGTCATTTTCATATCTATGT+CGG | + | chr7_4:39675160-39675179 | None:intergenic | 25.0% |
| ! | ATTCATTTCTTTGTTCACTT+TGG | + | chr7_4:39675495-39675514 | None:intergenic | 25.0% |
| ! | CAAAGAAATGAATAAAACCT+AGG | - | chr7_4:39675502-39675521 | Msa1153280:intron | 25.0% |
| ! | AAAACAAACATTAAGTCGTT+AGG | - | chr7_4:39675681-39675700 | Msa1153280:intron | 25.0% |
| !!! | GATATATAAAAGTGTTTTGG+TGG | + | chr7_4:39675853-39675872 | None:intergenic | 25.0% |
| ! | TTATATATCATATCGGGATT+TGG | - | chr7_4:39675864-39675883 | Msa1153280:intron | 25.0% |
| ! | AAAATAAAATAATGCGGAGT+TGG | - | chr7_4:39676073-39676092 | Msa1153280:intron | 25.0% |
| ! | AAATAAAATAATGCGGAGTT+GGG | - | chr7_4:39676074-39676093 | Msa1153280:intron | 25.0% |
| ! | AAATCCAATATGAGAAAAAG+TGG | + | chr7_4:39676356-39676375 | None:intergenic | 25.0% |
| ! | TGTGAAGAATAGAAAAACAT+TGG | - | chr7_4:39676552-39676571 | Msa1153280:intron | 25.0% |
| !!! | ACGTTTTAACATCATTAAAC+TGG | + | chr7_4:39676643-39676662 | None:intergenic | 25.0% |
| ! | GAGGTTAACATTATTTGTTT+GGG | - | chr7_4:39676861-39676880 | Msa1153280:intron | 25.0% |
| ! | ATTATTTGTTTGGGAATGAA+GGG | - | chr7_4:39676870-39676889 | Msa1153280:intron | 25.0% |
| !!! | TTGTTTGCTGCATTTTTATT+AGG | - | chr7_4:39677027-39677046 | Msa1153280:intron | 25.0% |
| ! | ATTCTTAACCAGACTAAATT+TGG | - | chr7_4:39677091-39677110 | Msa1153280:intron | 25.0% |
| !!! | TCCCAATTTTTTTAGATGAT+TGG | - | chr7_4:39677190-39677209 | Msa1153280:intron | 25.0% |
| ! | CACCAATCATCTAAAAAAAT+TGG | + | chr7_4:39677195-39677214 | None:intergenic | 25.0% |
| ! | TCAAAAAACTCTCATTCTAA+AGG | + | chr7_4:39677381-39677400 | None:intergenic | 25.0% |
| ! | AGTATATATAAGCACCATTA+GGG | + | chr7_4:39677624-39677643 | None:intergenic | 25.0% |
| ! | ATCTTTGTTAAAATCCTTCA+TGG | - | chr7_4:39677835-39677854 | Msa1153280:intron | 25.0% |
| !!! | TACCCTTTTTTCTTAGTATT+TGG | - | chr7_4:39677902-39677921 | Msa1153280:intron | 25.0% |
| ! | TTTGTTGAATCTACATTGAA+AGG | - | chr7_4:39678090-39678109 | Msa1153280:intron | 25.0% |
| ! | TTGTTGAATCTACATTGAAA+GGG | - | chr7_4:39678091-39678110 | Msa1153280:intron | 25.0% |
| ! | GCTTTCAAATTCAAATCATA+CGG | + | chr7_4:39678163-39678182 | None:intergenic | 25.0% |
| !! | AAGAAGTTTAACTGTGTTTT+TGG | - | chr7_4:39678483-39678502 | Msa1153280:intron | 25.0% |
| ! | TCTAACTATAAAACTTAAGG+TGG | + | chr7_4:39678515-39678534 | None:intergenic | 25.0% |
| ! | AAAAATTGTCCATTTGTGAA+TGG | + | chr7_4:39678699-39678718 | None:intergenic | 25.0% |
| !!! | TTCACAAATGGACAATTTTT+TGG | - | chr7_4:39678699-39678718 | Msa1153280:intron | 25.0% |
| ! | AACAAACTAAGTACATGTTT+GGG | - | chr7_4:39678841-39678860 | Msa1153280:intron | 25.0% |
| !!! | TTTTGGAACACAAAAATTCA+GGG | + | chr7_4:39678984-39679003 | None:intergenic | 25.0% |
| !! | TTATTGAAAAAGATGCCTTT+TGG | + | chr7_4:39679001-39679020 | None:intergenic | 25.0% |
| ! | AAATAAAAAATGGTCTGTTC+TGG | + | chr7_4:39679108-39679127 | None:intergenic | 25.0% |
| !!! | ACAGACCATTTTTTATTTTC+AGG | - | chr7_4:39679110-39679129 | Msa1153280:CDS | 25.0% |
| ! | CAAAATCAATCTACAAGAAA+GGG | + | chr7_4:39679144-39679163 | None:intergenic | 25.0% |
| ! | ACAAAATCAATCTACAAGAA+AGG | + | chr7_4:39679145-39679164 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTGAGCATATTG+TGG | - | chr7_4:39679321-39679340 | Msa1153280:five_prime_UTR | 25.0% |
| ! | CGAGTCTATAAAAATGAAAA+AGG | + | chr7_4:39679498-39679517 | None:intergenic | 25.0% |
| TTGAATGGAGAATTAAGAAG+GGG | + | chr7_4:39674546-39674565 | None:intergenic | 30.0% | |
| TGTTATATGAAGAACATGGA+TGG | + | chr7_4:39674571-39674590 | None:intergenic | 30.0% | |
| CCAATTTCAATTTCAGCAAA+TGG | + | chr7_4:39674734-39674753 | None:intergenic | 30.0% | |
| ! | CCATTTGCTGAAATTGAAAT+TGG | - | chr7_4:39674731-39674750 | Msa1153280:intron | 30.0% |
| TTGCTGAAATTGAAATTGGA+AGG | - | chr7_4:39674735-39674754 | Msa1153280:intron | 30.0% | |
| TGCTGAAATTGAAATTGGAA+GGG | - | chr7_4:39674736-39674755 | Msa1153280:intron | 30.0% | |
| TTGAAATTGGAAGGGATATA+TGG | - | chr7_4:39674744-39674763 | Msa1153280:intron | 30.0% | |
| TTGGTTTAAGGATACTCTTA+GGG | - | chr7_4:39674837-39674856 | Msa1153280:intron | 30.0% | |
| !! | GTTAATATGCAGATTTTGGT+TGG | - | chr7_4:39674877-39674896 | Msa1153280:intron | 30.0% |
| TGATTGTTTGTTTGTTTGGT+TGG | - | chr7_4:39675024-39675043 | Msa1153280:intron | 30.0% | |
| TAATAGTTCGGAGAATAAGT+TGG | - | chr7_4:39675100-39675119 | Msa1153280:intron | 30.0% | |
| ! | GTGTCTTAAATCTGAAGTAT+TGG | - | chr7_4:39675252-39675271 | Msa1153280:intron | 30.0% |
| ! | GTGTCTTAAATCTGAAGTAT+CGG | - | chr7_4:39675252-39675271 | Msa1153280:intron | 30.0% |
| TGTTAGCATTTGCAAGTATT+AGG | + | chr7_4:39675711-39675730 | None:intergenic | 30.0% | |
| !! | GCTAACAATGTTTTAAGTCA+CGG | - | chr7_4:39675724-39675743 | Msa1153280:intron | 30.0% |
| ATACCAGTTATTTAACAACG+CGG | + | chr7_4:39675826-39675845 | None:intergenic | 30.0% | |
| !!! | AGCAGTGATTTTTTGCAAAT+CGG | - | chr7_4:39675939-39675958 | Msa1153280:intron | 30.0% |
| AATAAAATAATGCGGAGTTG+GGG | - | chr7_4:39676075-39676094 | Msa1153280:intron | 30.0% | |
| TATTTATTTCAACCGCTTTG+CGG | - | chr7_4:39676304-39676323 | Msa1153280:intron | 30.0% | |
| !!! | CTATCCACTTTTTCTCATAT+TGG | - | chr7_4:39676349-39676368 | Msa1153280:intron | 30.0% |
| ! | TCACATAAATGTGTGGATTT+TGG | + | chr7_4:39676499-39676518 | None:intergenic | 30.0% |
| TATTCTTCACATATACAGAC+AGG | + | chr7_4:39676543-39676562 | None:intergenic | 30.0% | |
| ! | AAACGTAATGATTTGTGCTT+TGG | - | chr7_4:39676657-39676676 | Msa1153280:intron | 30.0% |
| TATGAAGTATGAACAATGAG+TGG | - | chr7_4:39676792-39676811 | Msa1153280:exon | 30.0% | |
| GGAGGTTAACATTATTTGTT+TGG | - | chr7_4:39676860-39676879 | Msa1153280:intron | 30.0% | |
| CATTATTTGTTTGGGAATGA+AGG | - | chr7_4:39676869-39676888 | Msa1153280:intron | 30.0% | |
| ATAAGCTGATAAAACAGTAG+AGG | + | chr7_4:39676969-39676988 | None:intergenic | 30.0% | |
| ! | TTTTCCTTTGTAAGTTAGTG+TGG | - | chr7_4:39676997-39677016 | Msa1153280:intron | 30.0% |
| AACTCACCTTTCAGAATTTA+GGG | + | chr7_4:39677123-39677142 | None:intergenic | 30.0% | |
| AAACTCACCTTTCAGAATTT+AGG | + | chr7_4:39677124-39677143 | None:intergenic | 30.0% | |
| ! | TTTTTAGATGATTGGTGTGA+AGG | - | chr7_4:39677198-39677217 | Msa1153280:intron | 30.0% |
| ! | TATACATTGACTATCCCATT+AGG | + | chr7_4:39677416-39677435 | None:intergenic | 30.0% |
| AATGTATATAAGCACCAGTA+GGG | - | chr7_4:39677428-39677447 | Msa1153280:intron | 30.0% | |
| ! | TAATGGGCAGTAATTAGAAA+CGG | + | chr7_4:39677506-39677525 | None:intergenic | 30.0% |
| CAGTATATATAAGCACCATT+AGG | + | chr7_4:39677625-39677644 | None:intergenic | 30.0% | |
| ! | TATATACTGACTATCCCATA+AGG | - | chr7_4:39677636-39677655 | Msa1153280:intron | 30.0% |
| TCAAAGAACTCTCATTCTAA+AGG | - | chr7_4:39677671-39677690 | Msa1153280:intron | 30.0% | |
| TGTTGAATCTACATTGAAAG+GGG | - | chr7_4:39678092-39678111 | Msa1153280:intron | 30.0% | |
| TAAATCTCATGCATGGAAAA+TGG | - | chr7_4:39678240-39678259 | Msa1153280:intron | 30.0% | |
| GTTAAGGATTCAAAGCAATA+AGG | + | chr7_4:39678308-39678327 | None:intergenic | 30.0% | |
| AACACAGTTAAACTTCTTGA+TGG | + | chr7_4:39678481-39678500 | None:intergenic | 30.0% | |
| !! | GATAGAGTGCTTATCAATTT+TGG | - | chr7_4:39678552-39678571 | Msa1153280:intron | 30.0% |
| ! | CATAGCATCTTTGTTCTAAA+AGG | - | chr7_4:39678644-39678663 | Msa1153280:intron | 30.0% |
| ! | AAAGTGTAATGGAAACTGAA+CGG | - | chr7_4:39678809-39678828 | Msa1153280:intron | 30.0% |
| CAACAAACTAAGTACATGTT+TGG | - | chr7_4:39678840-39678859 | Msa1153280:intron | 30.0% | |
| !!! | CTTTTGGAACACAAAAATTC+AGG | + | chr7_4:39678985-39679004 | None:intergenic | 30.0% |
| ! | CTGAATTTTTGTGTTCCAAA+AGG | - | chr7_4:39678983-39679002 | Msa1153280:CDS | 30.0% |
| !!! | TATTTTCTAGGGCAAGTTTA+TGG | - | chr7_4:39679025-39679044 | Msa1153280:CDS | 30.0% |
| TAACTGAAAGAACATCCATA+TGG | + | chr7_4:39679225-39679244 | None:intergenic | 30.0% | |
| ! | AGAACATGGATGGATTTGAA+TGG | + | chr7_4:39674561-39674580 | None:intergenic | 35.0% |
| GATATATGGAGAGCAGTATA+GGG | - | chr7_4:39674758-39674777 | Msa1153280:intron | 35.0% | |
| !! | TTGTGTGAAACGTTGGTTTA+AGG | - | chr7_4:39674825-39674844 | Msa1153280:intron | 35.0% |
| ! | GTTGGTTTAAGGATACTCTT+AGG | - | chr7_4:39674836-39674855 | Msa1153280:intron | 35.0% |
| GTTGGTCAGATGTATTATAG+TGG | - | chr7_4:39674895-39674914 | Msa1153280:intron | 35.0% | |
| CAGATGTATTATAGTGGCTA+TGG | - | chr7_4:39674901-39674920 | Msa1153280:intron | 35.0% | |
| TGTTTGTTTGTTTGGTTGGT+TGG | - | chr7_4:39675028-39675047 | Msa1153280:intron | 35.0% | |
| !!! | GTTGGTTGGTGTTGATTTTT+CGG | - | chr7_4:39675042-39675061 | Msa1153280:intron | 35.0% |
| !!! | TTGGTTGGTGTTGATTTTTC+GGG | - | chr7_4:39675043-39675062 | Msa1153280:intron | 35.0% |
| !! | GCTAACAACGTTTTAAGTCA+CGG | - | chr7_4:39675326-39675345 | Msa1153280:intron | 35.0% |
| GCAAATGATTGCAGATGATA+TGG | - | chr7_4:39675769-39675788 | Msa1153280:intron | 35.0% | |
| TATGAAGTGAAGAGAGAAGA+TGG | + | chr7_4:39676176-39676195 | None:intergenic | 35.0% | |
| TAGTGAATCGTGGAAAATAG+CGG | + | chr7_4:39676387-39676406 | None:intergenic | 35.0% | |
| GTGTTATCAATAGTGAATCG+TGG | + | chr7_4:39676397-39676416 | None:intergenic | 35.0% | |
| !! | TGTGTGGATTTTGGTAAACA+TGG | + | chr7_4:39676490-39676509 | None:intergenic | 35.0% |
| ATTGGAAGTTCTATTGCATG+TGG | - | chr7_4:39676570-39676589 | Msa1153280:intron | 35.0% | |
| ! | GTACTTGTTTGTCTGACTTT+TGG | - | chr7_4:39676833-39676852 | Msa1153280:CDS | 35.0% |
| !! | TGTTTGTCTGACTTTTGGTT+TGG | - | chr7_4:39676838-39676857 | Msa1153280:intron | 35.0% |
| !!! | GTTTGTCTGACTTTTGGTTT+GGG | - | chr7_4:39676839-39676858 | Msa1153280:intron | 35.0% |
| TAAAACAGTAGAGGTTTACC+TGG | + | chr7_4:39676960-39676979 | None:intergenic | 35.0% | |
| TTAGCCACACTAACTTACAA+AGG | + | chr7_4:39677004-39677023 | None:intergenic | 35.0% | |
| TTCCATCCCTAAATTCTGAA+AGG | - | chr7_4:39677114-39677133 | Msa1153280:intron | 35.0% | |
| !! | AGAGGAGTGTTCAAAAGATT+GGG | + | chr7_4:39677149-39677168 | None:intergenic | 35.0% |
| !! | AAGAGGAGTGTTCAAAAGAT+TGG | + | chr7_4:39677150-39677169 | None:intergenic | 35.0% |
| AAGATTGGGATAACAACAAG+AGG | + | chr7_4:39677167-39677186 | None:intergenic | 35.0% | |
| TGAACAACTATCTGACCTAA+TGG | - | chr7_4:39677398-39677417 | Msa1153280:intron | 35.0% | |
| GAACAACTATCTGACCTAAT+GGG | - | chr7_4:39677399-39677418 | Msa1153280:intron | 35.0% | |
| CAATGTATATAAGCACCAGT+AGG | - | chr7_4:39677427-39677446 | Msa1153280:intron | 35.0% | |
| AATGGGCAGTAATTAGAAAC+GGG | + | chr7_4:39677505-39677524 | None:intergenic | 35.0% | |
| AACAGGCTTACTATGAGAAA+CGG | + | chr7_4:39677588-39677607 | None:intergenic | 35.0% | |
| GAACAACTATCTGACCTTAT+GGG | + | chr7_4:39677653-39677672 | None:intergenic | 35.0% | |
| TGAACAACTATCTGACCTTA+TGG | + | chr7_4:39677654-39677673 | None:intergenic | 35.0% | |
| TGATACAAAACACACCATGA+AGG | + | chr7_4:39677852-39677871 | None:intergenic | 35.0% | |
| ! | TTCATGGTGTGTTTTGTATC+AGG | - | chr7_4:39677851-39677870 | Msa1153280:intron | 35.0% |
| ! | CATGCATGAGATTTAAGACA+AGG | + | chr7_4:39678235-39678254 | None:intergenic | 35.0% |
| CTTGTCTTAAATCTCATGCA+TGG | - | chr7_4:39678233-39678252 | Msa1153280:intron | 35.0% | |
| CTTTGAATCCTTAACTGCTT+TGG | - | chr7_4:39678313-39678332 | Msa1153280:intron | 35.0% | |
| TGACAATACCAAAGCAGTTA+AGG | + | chr7_4:39678324-39678343 | None:intergenic | 35.0% | |
| ! | ATAGTGCAAAGCAACTTGTT+TGG | - | chr7_4:39678413-39678432 | Msa1153280:intron | 35.0% |
| !! | TTAGATAACTTGCTGAGTCT+AGG | - | chr7_4:39678530-39678549 | Msa1153280:intron | 35.0% |
| !! | TCAATGTTGATTCTACCAGT+TGG | - | chr7_4:39678752-39678771 | Msa1153280:intron | 35.0% |
| CAGTATGTTACATTTCCAAC+TGG | + | chr7_4:39678770-39678789 | None:intergenic | 35.0% | |
| ! | AAGTGTAATGGAAACTGAAC+GGG | - | chr7_4:39678810-39678829 | Msa1153280:intron | 35.0% |
| ! | TAAGTACATGTTTGGGATCA+CGG | - | chr7_4:39678848-39678867 | Msa1153280:intron | 35.0% |
| !! | CGTAGCTTTGTTCAAAATCA+TGG | - | chr7_4:39678899-39678918 | Msa1153280:intron | 35.0% |
| !! | AGCTTTGTTCAAAATCATGG+TGG | - | chr7_4:39678902-39678921 | Msa1153280:intron | 35.0% |
| !! | CAACTAACTTGGTGTATGTT+TGG | + | chr7_4:39678961-39678980 | None:intergenic | 35.0% |
| AAAATTCAGGGCAACTAACT+TGG | + | chr7_4:39678972-39678991 | None:intergenic | 35.0% | |
| !!! | TGTGCTCCGTTTTTTTTTGT+AGG | - | chr7_4:39679162-39679181 | Msa1153280:five_prime_UTR | 35.0% |
| GAATTCTTTCTCACTTTCCT+TGG | - | chr7_4:39679360-39679379 | Msa1153280:five_prime_UTR | 35.0% | |
| CACATCTTGCAAATAGAACA+AGG | - | chr7_4:39679391-39679410 | Msa1153280:five_prime_UTR | 35.0% | |
| TATCGGAGAAAAAGACAGTG+CGG | + | chr7_4:39674493-39674512 | None:intergenic | 40.0% | |
| TGCAGTTTAGAGAGAGAAAG+AGG | + | chr7_4:39674520-39674539 | None:intergenic | 40.0% | |
| GGATATATGGAGAGCAGTAT+AGG | - | chr7_4:39674757-39674776 | Msa1153280:intron | 40.0% | |
| AGTATAGGGAAAGATGGCAA+CGG | - | chr7_4:39674772-39674791 | Msa1153280:intron | 40.0% | |
| ! | TTTTCCTTTATCAGGGGTTG+TGG | - | chr7_4:39674798-39674817 | Msa1153280:intron | 40.0% |
| GTTTAAGGATACTCTTAGGG+AGG | - | chr7_4:39674840-39674859 | Msa1153280:intron | 40.0% | |
| TGTTGCAAAAGATGCTCAGA+AGG | - | chr7_4:39674924-39674943 | Msa1153280:intron | 40.0% | |
| ! | AGATGATATGGCCTTGATTG+TGG | - | chr7_4:39675781-39675800 | Msa1153280:intron | 40.0% |
| !!! | TAGCCTATCGGTTTTTGTCA+CGG | + | chr7_4:39675895-39675914 | None:intergenic | 40.0% |
| CAAAAACCGATAGGCTATTG+CGG | - | chr7_4:39675898-39675917 | Msa1153280:intron | 40.0% | |
| TTAGTGATGAGAGGTTACCT+AGG | + | chr7_4:39676138-39676157 | None:intergenic | 40.0% | |
| AAATAGAAGAAGCCGCAAAG+CGG | + | chr7_4:39676319-39676338 | None:intergenic | 40.0% | |
| AGAAAAAGTGGATAGCGTAG+CGG | + | chr7_4:39676344-39676363 | None:intergenic | 40.0% | |
| ! | CACTATTGATAACACTGTCG+TGG | - | chr7_4:39676402-39676421 | Msa1153280:intron | 40.0% |
| ! | TATTGATAACACTGTCGTGG+AGG | - | chr7_4:39676405-39676424 | Msa1153280:intron | 40.0% |
| TGGGAATGAAGGGAAAACTT+TGG | - | chr7_4:39676880-39676899 | Msa1153280:intron | 40.0% | |
| AGGTCTTCAGTTTGGAAAGT+TGG | - | chr7_4:39676924-39676943 | Msa1153280:intron | 40.0% | |
| TGACTCTGATGAATCAAACG+AGG | - | chr7_4:39677068-39677087 | Msa1153280:intron | 40.0% | |
| GGATGGAACCAAATTTAGTC+TGG | + | chr7_4:39677102-39677121 | None:intergenic | 40.0% | |
| CACCTTTCAGAATTTAGGGA+TGG | + | chr7_4:39677119-39677138 | None:intergenic | 40.0% | |
| !! | CATTCTAAAGGCATCAGGAA+GGG | + | chr7_4:39677683-39677702 | None:intergenic | 40.0% |
| !! | TCATTCTAAAGGCATCAGGA+AGG | + | chr7_4:39677682-39677701 | None:intergenic | 40.0% |
| !! | ACTCTCATTCTAAAGGCATC+AGG | + | chr7_4:39677678-39677697 | None:intergenic | 40.0% |
| TATAAGCACCATTAGGGAGA+GGG | + | chr7_4:39677618-39677637 | None:intergenic | 40.0% | |
| ATATAAGCACCATTAGGGAG+AGG | + | chr7_4:39677619-39677638 | None:intergenic | 40.0% | |
| !! | ACTCTCATTCTAAAGGCATC+AGG | - | chr7_4:39677678-39677697 | Msa1153280:intron | 40.0% |
| !! | CATTCTAAAGGCATCAGGAA+CGG | - | chr7_4:39677683-39677702 | Msa1153280:intron | 40.0% |
| TCGATTACCATCCATGATCA+AGG | - | chr7_4:39677758-39677777 | Msa1153280:intron | 40.0% | |
| AAACACACCTTGATCATGGA+TGG | + | chr7_4:39677768-39677787 | None:intergenic | 40.0% | |
| CAGTAAACACACCTTGATCA+TGG | + | chr7_4:39677772-39677791 | None:intergenic | 40.0% | |
| CAGGTTGCTCAAATTTGACT+TGG | - | chr7_4:39677870-39677889 | Msa1153280:intron | 40.0% | |
| TCTACATTGAAAGGGGTTTC+AGG | - | chr7_4:39678099-39678118 | Msa1153280:intron | 40.0% | |
| ! | ACTTGTTTGGTGGTTGAGTT+TGG | - | chr7_4:39678426-39678445 | Msa1153280:intron | 40.0% |
| CTGAAAGAACATCCATATGG+TGG | + | chr7_4:39679222-39679241 | None:intergenic | 40.0% | |
| ATAGACTCGTTTCGTTTGTC+TGG | - | chr7_4:39679509-39679528 | Msa1153280:five_prime_UTR | 40.0% | |
| AGAGAGAAAGAGGCAGCTAT+CGG | + | chr7_4:39674510-39674529 | None:intergenic | 45.0% | |
| GAGAGCAGTATAGGGAAAGA+TGG | - | chr7_4:39674766-39674785 | Msa1153280:intron | 45.0% | |
| GTATAGGGAAAGATGGCAAC+GGG | - | chr7_4:39674773-39674792 | Msa1153280:intron | 45.0% | |
| ! | AACGGGCGTTTTCCTTTATC+AGG | - | chr7_4:39674790-39674809 | Msa1153280:intron | 45.0% |
| ! | ACGGGCGTTTTCCTTTATCA+GGG | - | chr7_4:39674791-39674810 | Msa1153280:intron | 45.0% |
| TGGCAGATTGTGTGAAACGT+TGG | - | chr7_4:39674818-39674837 | Msa1153280:intron | 45.0% | |
| ! | TATCTATGTCGGTGCTTCCT+AGG | + | chr7_4:39675149-39675168 | None:intergenic | 45.0% |
| CAATACTGAGCATCACAACG+TGG | + | chr7_4:39675352-39675371 | None:intergenic | 45.0% | |
| GCGAAGAATTGCAGCTGATA+TGG | - | chr7_4:39675371-39675390 | Msa1153280:intron | 45.0% | |
| AGCTGATATGGCCTCAATTG+AGG | - | chr7_4:39675383-39675402 | Msa1153280:intron | 45.0% | |
| TCGCAACACAACCTCAATTG+AGG | + | chr7_4:39675397-39675416 | None:intergenic | 45.0% | |
| TTGAGGTTGTGTTGCGATTG+TGG | - | chr7_4:39675400-39675419 | Msa1153280:intron | 45.0% | |
| AAGGTTCACGACTGCAATCT+AGG | + | chr7_4:39675452-39675471 | None:intergenic | 45.0% | |
| TGTCAACGTTGTGTCATGTC+TGG | + | chr7_4:39675545-39675564 | None:intergenic | 45.0% | |
| ! | CAATACCAAGCATCGCAACA+TGG | + | chr7_4:39675750-39675769 | None:intergenic | 45.0% |
| TCGCAACACAACCACAATCA+AGG | + | chr7_4:39675795-39675814 | None:intergenic | 45.0% | |
| GAGCCGCGTTGTTAAATAAC+TGG | - | chr7_4:39675820-39675839 | Msa1153280:intron | 45.0% | |
| CAACCGTGACAAAAACCGAT+AGG | - | chr7_4:39675889-39675908 | Msa1153280:intron | 45.0% | |
| TACCTAGGTCATGGGGTTTA+GGG | + | chr7_4:39676123-39676142 | None:intergenic | 45.0% | |
| TTACCTAGGTCATGGGGTTT+AGG | + | chr7_4:39676124-39676143 | None:intergenic | 45.0% | |
| TGAGAGGTTACCTAGGTCAT+GGG | + | chr7_4:39676131-39676150 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTCA+TGG | + | chr7_4:39676132-39676151 | None:intergenic | 45.0% | |
| AGATGGGGTTTAGTGATGAG+AGG | + | chr7_4:39676147-39676166 | None:intergenic | 45.0% | |
| TCTCATCACTAAACCCCATC+TGG | - | chr7_4:39676146-39676165 | Msa1153280:intron | 45.0% | |
| GAAAAAGTGGATAGCGTAGC+GGG | + | chr7_4:39676343-39676362 | None:intergenic | 45.0% | |
| TATTGCCTAGATTGCAGTCG+TGG | - | chr7_4:39675444-39675463 | Msa1153280:intron | 45.0% | |
| !!! | TGTCTGACTTTTGGTTTGGG+AGG | - | chr7_4:39676842-39676861 | Msa1153280:intron | 45.0% |
| !! | TTTGGCTGACAAAAGCATCG+AGG | - | chr7_4:39676898-39676917 | Msa1153280:intron | 45.0% |
| !! | TTGGCTGACAAAAGCATCGA+GGG | - | chr7_4:39676899-39676918 | Msa1153280:intron | 45.0% |
| !! | TGACAAAAGCATCGAGGGTT+AGG | - | chr7_4:39676904-39676923 | Msa1153280:intron | 45.0% |
| AAAGTTGGAGATAAGCGTCC+AGG | - | chr7_4:39676939-39676958 | Msa1153280:intron | 45.0% | |
| GTAAACGTGCACCTTGATCA+TGG | - | chr7_4:39677280-39677299 | Msa1153280:intron | 45.0% | |
| TCGACTACCATCCATGATCA+AGG | + | chr7_4:39677294-39677313 | None:intergenic | 45.0% | |
| AGAGAAGCCTTGAACAGAGT+AGG | - | chr7_4:39677325-39677344 | Msa1153280:intron | 45.0% | |
| GAGAAGCCTTGAACAGAGTA+GGG | - | chr7_4:39677326-39677345 | Msa1153280:intron | 45.0% | |
| TCTCAACCCTACTCTGTTCA+AGG | + | chr7_4:39677335-39677354 | None:intergenic | 45.0% | |
| ATATAAGCACCAGTAGGGAG+AGG | - | chr7_4:39677433-39677452 | Msa1153280:intron | 45.0% | |
| TATAAGCACCAGTAGGGAGA+GGG | - | chr7_4:39677434-39677453 | Msa1153280:intron | 45.0% | |
| AATTAGAAACGGGCCGTGAT+GGG | + | chr7_4:39677557-39677576 | None:intergenic | 45.0% | |
| TAATTAGAAACGGGCCGTGA+TGG | + | chr7_4:39677556-39677575 | None:intergenic | 45.0% | |
| TAATTAGAAACGGGCCGTGA+TGG | - | chr7_4:39677556-39677575 | Msa1153280:intron | 45.0% | |
| AATTAGAAACGGGCCGTGAT+GGG | - | chr7_4:39677557-39677576 | Msa1153280:intron | 45.0% | |
| CTCATAGTAAGCCTGTTGAG+AGG | - | chr7_4:39677591-39677610 | Msa1153280:intron | 45.0% | |
| AGAATCTCTCAACCCTACTC+TGG | - | chr7_4:39677711-39677730 | Msa1153280:intron | 45.0% | |
| ! | GTGCAAAGCAACTTGTTTGG+TGG | - | chr7_4:39678416-39678435 | Msa1153280:intron | 45.0% |
| TGGTGGTTGAGTTTGGTACT+TGG | - | chr7_4:39678433-39678452 | Msa1153280:intron | 45.0% | |
| ATCTGCACAAAGTGAGAGAG+TGG | - | chr7_4:39678600-39678619 | Msa1153280:intron | 45.0% | |
| GCTTCTTCATAGCCACCATA+TGG | - | chr7_4:39679207-39679226 | Msa1153280:intron | 45.0% | |
| CAAGATGTGATGTCATGCCA+AGG | + | chr7_4:39679380-39679399 | None:intergenic | 45.0% | |
| ! | CGGGCGTTTTCCTTTATCAG+GGG | - | chr7_4:39674792-39674811 | Msa1153280:intron | 50.0% |
| TCTGCCACAACCCCTGATAA+AGG | + | chr7_4:39674805-39674824 | None:intergenic | 50.0% | |
| ACTCTTAGGGAGGCTAAAGC+TGG | - | chr7_4:39674850-39674869 | Msa1153280:intron | 50.0% | |
| TGCTCGTGTCAGTTCTTCCT+AGG | + | chr7_4:39675522-39675541 | None:intergenic | 50.0% | |
| TTGTGGTTGTGTTGCGATCG+TGG | - | chr7_4:39675798-39675817 | Msa1153280:intron | 50.0% | |
| ACCGATAGGCTATTGCGGTT+CGG | - | chr7_4:39675903-39675922 | Msa1153280:intron | 50.0% | |
| ACCGAACCGCAATAGCCTAT+CGG | + | chr7_4:39675907-39675926 | None:intergenic | 50.0% | |
| ATGCGGAGTTGGGGATGATA+TGG | - | chr7_4:39676084-39676103 | Msa1153280:intron | 50.0% | |
| TGCGGAGTTGGGGATGATAT+GGG | - | chr7_4:39676085-39676104 | Msa1153280:intron | 50.0% | |
| ACCTAGGTCATGGGGTTTAG+GGG | + | chr7_4:39676122-39676141 | None:intergenic | 50.0% | |
| GAGAGGTTACCTAGGTCATG+GGG | + | chr7_4:39676130-39676149 | None:intergenic | 50.0% | |
| AGAAGATGGAGAGCCAGATG+GGG | + | chr7_4:39676162-39676181 | None:intergenic | 50.0% | |
| GAGAAGATGGAGAGCCAGAT+GGG | + | chr7_4:39676163-39676182 | None:intergenic | 50.0% | |
| AGAGAAGATGGAGAGCCAGA+TGG | + | chr7_4:39676164-39676183 | None:intergenic | 50.0% | |
| AAGGTCCACGACTGCAATCT+AGG | + | chr7_4:39676454-39676473 | None:intergenic | 50.0% | |
| CGAGGGTTAGGTCTTCAGTT+TGG | - | chr7_4:39676916-39676935 | Msa1153280:intron | 50.0% | |
| ACGTGCACCTTGATCATGGA+TGG | - | chr7_4:39677284-39677303 | Msa1153280:intron | 50.0% | |
| AGAAACTGCCCAACCCATCA+CGG | - | chr7_4:39677479-39677498 | Msa1153280:intron | 50.0% | |
| TCTCAACCCTACTCTGGTCA+AGG | - | chr7_4:39677717-39677736 | Msa1153280:intron | 50.0% | |
| GAGAAGCCTTGACCAGAGTA+GGG | + | chr7_4:39677726-39677745 | None:intergenic | 50.0% | |
| AGAGAAGCCTTGACCAGAGT+AGG | + | chr7_4:39677727-39677746 | None:intergenic | 50.0% | |
| ACTCGTTTCGTTTGTCTGGC+TGG | - | chr7_4:39679513-39679532 | Msa1153280:five_prime_UTR | 50.0% | |
| GCGGAGTTGGGGATGATATG+GGG | - | chr7_4:39676086-39676105 | Msa1153280:intron | 55.0% | |
| ACCCCTAAACCCCATGACCT+AGG | - | chr7_4:39676118-39676137 | Msa1153280:intron | 55.0% | |
| TGAGAGATCCCTCTCCCTAC+TGG | + | chr7_4:39677445-39677464 | None:intergenic | 55.0% | |
| AGAAACGGCCCAACCCATCA+CGG | + | chr7_4:39677573-39677592 | None:intergenic | 55.0% | |
| TGAGAGGTCCCTCTCCCTAA+TGG | - | chr7_4:39677607-39677626 | Msa1153280:intron | 55.0% | |
| ! | GTTTGGGATCACGGTGACAC+TGG | - | chr7_4:39678857-39678876 | Msa1153280:intron | 55.0% |
| !! | CGTTTGTCTGGCTGGCTTCA+TGG | - | chr7_4:39679521-39679540 | Msa1153280:five_prime_UTR | 55.0% |
| CACGGCCATGTTGCGATGCT+TGG | - | chr7_4:39675742-39675761 | Msa1153280:intron | 60.0% | |
| !! | GAAACGGGCCGTGATGGGTT+GGG | + | chr7_4:39677562-39677581 | None:intergenic | 60.0% |
| !! | AGAAACGGGCCGTGATGGGT+TGG | + | chr7_4:39677561-39677580 | None:intergenic | 60.0% |
| !! | AGAAACGGGCCGTGATGGGT+TGG | - | chr7_4:39677561-39677580 | Msa1153280:intron | 60.0% |
| !! | GAAACGGGCCGTGATGGGTT+GGG | - | chr7_4:39677562-39677581 | Msa1153280:intron | 60.0% |
| AGGGAGAGGGACCTCTCAAC+AGG | + | chr7_4:39677605-39677624 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 39674352 | 39679551 | 39674352 | ID=Msa1153280;Name=Msa1153280 |
| chr7_4 | mRNA | 39674352 | 39679551 | 39674352 | ID=Msa1153280-mRNA-1;Parent=Msa1153280;Name=Msa1153280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=329|1|1|1|0.5|0.4|5|405|100 |
| chr7_4 | exon | 39674352 | 39674719 | 39674352 | ID=Msa1153280-mRNA-1:exon:9609;Parent=Msa1153280-mRNA-1 |
| chr7_4 | exon | 39676768 | 39676854 | 39676768 | ID=Msa1153280-mRNA-1:exon:9608;Parent=Msa1153280-mRNA-1 |
| chr7_4 | exon | 39676943 | 39677012 | 39676943 | ID=Msa1153280-mRNA-1:exon:9607;Parent=Msa1153280-mRNA-1 |
| chr7_4 | exon | 39678958 | 39679202 | 39678958 | ID=Msa1153280-mRNA-1:exon:9606;Parent=Msa1153280-mRNA-1 |
| chr7_4 | exon | 39679285 | 39679551 | 39679285 | ID=Msa1153280-mRNA-1:exon:9605;Parent=Msa1153280-mRNA-1 |
| chr7_4 | five_prime_UTR | 39679285 | 39679551 | 39679285 | ID=Msa1153280-mRNA-1:five_prime_utr;Parent=Msa1153280-mRNA-1 |
| chr7_4 | five_prime_UTR | 39679141 | 39679202 | 39679141 | ID=Msa1153280-mRNA-1:five_prime_utr;Parent=Msa1153280-mRNA-1 |
| chr7_4 | CDS | 39678958 | 39679140 | 39678958 | ID=Msa1153280-mRNA-1:cds;Parent=Msa1153280-mRNA-1 |
| chr7_4 | CDS | 39676943 | 39677012 | 39676943 | ID=Msa1153280-mRNA-1:cds;Parent=Msa1153280-mRNA-1 |
| chr7_4 | CDS | 39676805 | 39676854 | 39676805 | ID=Msa1153280-mRNA-1:cds;Parent=Msa1153280-mRNA-1 |
| chr7_4 | three_prime_UTR | 39676768 | 39676804 | 39676768 | ID=Msa1153280-mRNA-1:three_prime_utr;Parent=Msa1153280-mRNA-1 |
| chr7_4 | three_prime_UTR | 39674352 | 39674719 | 39674352 | ID=Msa1153280-mRNA-1:three_prime_utr;Parent=Msa1153280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
