Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113130 | sp|Q9FHW7|SKP1B_ARATH | 64.646 | 99 | 19 | 1 | 3 | 85 | 2 | 100 | 1.25e-35 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113130 | Q9XF99 | 92.308 | 91 | 7 | 0 | 4 | 94 | 1 | 91 | 1.41e-49 | 168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0113130 | 0.826743 | 2.294623e-54 | -8.615850e-47 |
| Msa0033880 | Msa0113130 | 0.810623 | 1.051312e-50 | -8.615850e-47 |
| Msa0043860 | Msa0113130 | 0.810876 | 9.267445e-51 | -8.615850e-47 |
| Msa0055100 | Msa0113130 | 0.818030 | 2.424667e-52 | -8.615850e-47 |
| Msa0056270 | Msa0113130 | 0.818623 | 1.779595e-52 | -8.615850e-47 |
| Msa0057610 | Msa0113130 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
| Msa0061970 | Msa0113130 | 0.830614 | 2.658930e-55 | -8.615850e-47 |
| Msa0068000 | Msa0113130 | 0.823070 | 1.687950e-53 | -8.615850e-47 |
| Msa0068020 | Msa0113130 | 0.855869 | 4.722312e-62 | -8.615850e-47 |
| Msa0077010 | Msa0113130 | 0.844523 | 7.174219e-59 | -8.615850e-47 |
| Msa0101180 | Msa0113130 | 0.844604 | 6.819303e-59 | -8.615850e-47 |
| Msa0113130 | Msa0113240 | 0.920115 | 1.924071e-87 | -8.615850e-47 |
| Msa0113130 | Msa0115370 | 0.805319 | 1.413479e-49 | -8.615850e-47 |
| Msa0113130 | Msa0126840 | 0.819809 | 9.553857e-53 | -8.615850e-47 |
| Msa0113130 | Msa0127850 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0113130 | Msa0165950 | 0.808420 | 3.124808e-50 | -8.615850e-47 |
| Msa0113130 | Msa0166750 | 0.844986 | 5.380918e-59 | -8.615850e-47 |
| Msa0113130 | Msa0174000 | 0.803395 | 3.558253e-49 | -8.615850e-47 |
| Msa0113130 | Msa0224560 | 0.824310 | 8.653023e-54 | -8.615850e-47 |
| Msa0113130 | Msa0226460 | 0.801332 | 9.466605e-49 | -8.615850e-47 |
| Msa0113130 | Msa0230520 | 0.808935 | 2.425279e-50 | -8.615850e-47 |
| Msa0113130 | Msa0244980 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0113130 | Msa0245060 | 0.824831 | 6.520540e-54 | -8.615850e-47 |
| Msa0113130 | Msa0245430 | 0.801001 | 1.106370e-48 | -8.615850e-47 |
| Msa0113130 | Msa0245580 | 0.837330 | 5.540327e-57 | -8.615850e-47 |
| Msa0113130 | Msa0262480 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0113130 | Msa0269470 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0113130 | Msa0280370 | 0.805357 | 1.387946e-49 | -8.615850e-47 |
| Msa0113130 | Msa0280430 | 0.813826 | 2.102921e-51 | -8.615850e-47 |
| Msa0113130 | Msa0291520 | 0.814546 | 1.457991e-51 | -8.615850e-47 |
| Msa0113130 | Msa0296250 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
| Msa0113130 | Msa0296790 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0113130 | Msa0304660 | 0.808113 | 3.632828e-50 | -8.615850e-47 |
| Msa0113130 | Msa0331700 | 0.807581 | 4.712502e-50 | -8.615850e-47 |
| Msa0113130 | Msa0348830 | 0.806796 | 6.913653e-50 | -8.615850e-47 |
| Msa0113130 | Msa0358770 | 0.830982 | 2.160545e-55 | -8.615850e-47 |
| Msa0113130 | Msa0376820 | 0.842460 | 2.551997e-58 | -8.615850e-47 |
| Msa0113130 | Msa0384880 | 0.837637 | 4.621431e-57 | -8.615850e-47 |
| Msa0113130 | Msa0389510 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0113130 | Msa0408240 | -0.818903 | 1.537572e-52 | -8.615850e-47 |
| Msa0113130 | Msa0423750 | 0.803710 | 3.061550e-49 | -8.615850e-47 |
| Msa0113130 | Msa0443390 | 0.807993 | 3.852260e-50 | -8.615850e-47 |
| Msa0113130 | Msa0472130 | 0.842315 | 2.787878e-58 | -8.615850e-47 |
| Msa0113130 | Msa0523810 | 0.814220 | 1.721338e-51 | -8.615850e-47 |
| Msa0113130 | Msa0534750 | 0.834043 | 3.765852e-56 | -8.615850e-47 |
| Msa0113130 | Msa0550570 | 0.803539 | 3.321190e-49 | -8.615850e-47 |
| Msa0113130 | Msa0580230 | 0.804207 | 2.412862e-49 | -8.615850e-47 |
| Msa0113130 | Msa0593700 | 0.845907 | 3.030383e-59 | -8.615850e-47 |
| Msa0113130 | Msa0618930 | 0.806471 | 8.095692e-50 | -8.615850e-47 |
| Msa0113130 | Msa0626940 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
| Msa0113130 | Msa0633570 | 0.859661 | 3.543831e-63 | -8.615850e-47 |
| Msa0113130 | Msa0665080 | 0.801347 | 9.398280e-49 | -8.615850e-47 |
| Msa0113130 | Msa0666230 | 0.817667 | 2.927855e-52 | -8.615850e-47 |
| Msa0113130 | Msa0683780 | 0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa0113130 | Msa0693210 | 0.845131 | 4.917399e-59 | -8.615850e-47 |
| Msa0113130 | Msa0705000 | 0.802438 | 5.610610e-49 | -8.615850e-47 |
| Msa0113130 | Msa0705040 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa0113130 | Msa0819540 | 0.823320 | 1.476216e-53 | -8.615850e-47 |
| Msa0113130 | Msa0822170 | 0.841958 | 3.464101e-58 | -8.615850e-47 |
| Msa0113130 | Msa0822180 | 0.818027 | 2.427848e-52 | -8.615850e-47 |
| Msa0113130 | Msa0838370 | 0.830308 | 3.159064e-55 | -8.615850e-47 |
| Msa0113130 | Msa0858440 | 0.850364 | 1.781322e-60 | -8.615850e-47 |
| Msa0113130 | Msa0913240 | 0.800959 | 1.128219e-48 | -8.615850e-47 |
| Msa0113130 | Msa0921870 | 0.833152 | 6.285529e-56 | -8.615850e-47 |
| Msa0113130 | Msa0928120 | 0.824584 | 7.457079e-54 | -8.615850e-47 |
| Msa0113130 | Msa0943170 | 0.812866 | 3.417099e-51 | -8.615850e-47 |
| Msa0113130 | Msa0960830 | 0.825276 | 5.121365e-54 | -8.615850e-47 |
| Msa0113130 | Msa0963020 | 0.830251 | 3.262070e-55 | -8.615850e-47 |
| Msa0113130 | Msa1025940 | 0.816819 | 4.543030e-52 | -8.615850e-47 |
| Msa0113130 | Msa1070390 | 0.803903 | 2.792043e-49 | -8.615850e-47 |
| Msa0113130 | Msa1072710 | 0.800913 | 1.153223e-48 | -8.615850e-47 |
| Msa0113130 | Msa1083880 | 0.806937 | 6.452088e-50 | -8.615850e-47 |
| Msa0113130 | Msa1125500 | 0.838868 | 2.226867e-57 | -8.615850e-47 |
| Msa0113130 | Msa1125580 | 0.802419 | 5.661123e-49 | -8.615850e-47 |
| Msa0113130 | Msa1131170 | 0.809234 | 2.092915e-50 | -8.615850e-47 |
| Msa0113130 | Msa1153280 | 0.808192 | 3.494327e-50 | -8.615850e-47 |
| Msa0113130 | Msa1165780 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0113130 | Msa1166870 | 0.824484 | 7.871247e-54 | -8.615850e-47 |
| Msa0113130 | Msa1184370 | 0.803033 | 4.227932e-49 | -8.615850e-47 |
| Msa0113130 | Msa1201830 | 0.803029 | 4.235890e-49 | -8.615850e-47 |
| Msa0113130 | Msa1205850 | 0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0113130 | Msa1206650 | 0.801756 | 7.746993e-49 | -8.615850e-47 |
| Msa0113130 | Msa1208020 | 0.812120 | 4.975512e-51 | -8.615850e-47 |
| Msa0113130 | Msa1227690 | 0.808008 | 3.823835e-50 | -8.615850e-47 |
| Msa0113130 | Msa1253810 | 0.803184 | 3.934784e-49 | -8.615850e-47 |
| Msa0113130 | Msa1256770 | 0.813028 | 3.148979e-51 | -8.615850e-47 |
| Msa0113130 | Msa1270620 | 0.802250 | 6.132771e-49 | -8.615850e-47 |
| Msa0113130 | Msa1329540 | 0.805340 | 1.399804e-49 | -8.615850e-47 |
| Msa0113130 | Msa1331250 | 0.816938 | 4.272341e-52 | -8.615850e-47 |
| Msa0113130 | Msa1349570 | 0.820639 | 6.166079e-53 | -8.615850e-47 |
| Msa0113130 | Msa1369190 | 0.824375 | 8.351589e-54 | -8.615850e-47 |
| Msa0113130 | Msa1411950 | 0.806254 | 8.994325e-50 | -8.615850e-47 |
| Msa0113130 | Msa1462860 | 0.835907 | 1.276884e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113130 | MtrunA17_Chr5g0405891 | 90.217 | 92 | 9 | 0 | 3 | 94 | 2 | 93 | 1.16e-52 | 166 |
| Msa0113130 | MtrunA17_Chr5g0405871 | 87.778 | 90 | 11 | 0 | 3 | 92 | 2 | 91 | 4.91e-50 | 160 |
| Msa0113130 | MtrunA17_Chr7g0259271 | 71.569 | 102 | 26 | 1 | 1 | 99 | 1 | 102 | 2.76e-45 | 148 |
| Msa0113130 | MtrunA17_Chr7g0259261 | 70.588 | 102 | 27 | 1 | 1 | 99 | 1 | 102 | 8.26e-45 | 146 |
| Msa0113130 | MtrunA17_Chr7g0221641 | 80.000 | 85 | 17 | 0 | 1 | 85 | 1 | 85 | 3.43e-44 | 145 |
| Msa0113130 | MtrunA17_Chr7g0221621 | 76.471 | 85 | 20 | 0 | 1 | 85 | 1 | 85 | 1.98e-41 | 138 |
| Msa0113130 | MtrunA17_Chr8g0361911 | 76.744 | 86 | 19 | 1 | 1 | 85 | 1 | 86 | 3.06e-40 | 135 |
| Msa0113130 | MtrunA17_Chr7g0259371 | 69.149 | 94 | 26 | 2 | 1 | 91 | 1 | 94 | 6.14e-38 | 129 |
| Msa0113130 | MtrunA17_Chr5g0438791 | 75.000 | 84 | 20 | 1 | 3 | 85 | 2 | 85 | 1.37e-37 | 128 |
| Msa0113130 | MtrunA17_Chr4g0014211 | 71.765 | 85 | 23 | 1 | 2 | 85 | 8 | 92 | 1.58e-37 | 128 |
| Msa0113130 | MtrunA17_Chr4g0014231 | 69.412 | 85 | 26 | 0 | 1 | 85 | 19 | 103 | 3.39e-36 | 125 |
| Msa0113130 | MtrunA17_Chr8g0362291 | 71.429 | 84 | 23 | 1 | 3 | 85 | 2 | 85 | 6.28e-36 | 124 |
| Msa0113130 | MtrunA17_Chr7g0259231 | 72.093 | 86 | 22 | 1 | 2 | 85 | 3 | 88 | 8.84e-36 | 124 |
| Msa0113130 | MtrunA17_Chr5g0436881 | 69.512 | 82 | 24 | 1 | 3 | 83 | 32 | 113 | 2.14e-34 | 119 |
| Msa0113130 | MtrunA17_Chr3g0139751 | 55.856 | 111 | 47 | 1 | 1 | 109 | 1 | 111 | 2.52e-34 | 120 |
| Msa0113130 | MtrunA17_Chr4g0014261 | 47.934 | 121 | 56 | 2 | 2 | 121 | 3 | 117 | 1.14e-29 | 107 |
| Msa0113130 | MtrunA17_Chr4g0014241 | 66.250 | 80 | 20 | 2 | 7 | 85 | 6 | 79 | 1.78e-29 | 107 |
| Msa0113130 | MtrunA17_Chr7g0259441 | 66.279 | 86 | 25 | 2 | 1 | 85 | 1 | 83 | 3.39e-29 | 107 |
| Msa0113130 | MtrunA17_Chr4g0014271 | 61.176 | 85 | 26 | 2 | 2 | 85 | 3 | 81 | 5.29e-28 | 103 |
| Msa0113130 | MtrunA17_Chr7g0259391 | 85.000 | 60 | 8 | 1 | 1 | 59 | 1 | 60 | 3.93e-27 | 98.6 |
| Msa0113130 | MtrunA17_Chr4g0015171 | 54.118 | 85 | 39 | 0 | 1 | 85 | 5 | 89 | 1.35e-26 | 100 |
| Msa0113130 | MtrunA17_Chr7g0259381 | 50.000 | 114 | 40 | 3 | 1 | 111 | 1 | 100 | 3.94e-26 | 98.6 |
| Msa0113130 | MtrunA17_Chr4g0007651 | 77.419 | 62 | 13 | 1 | 5 | 65 | 26 | 87 | 4.81e-26 | 100 |
| Msa0113130 | MtrunA17_Chr7g0259421 | 65.385 | 78 | 26 | 1 | 1 | 77 | 1 | 78 | 1.36e-25 | 99.0 |
| Msa0113130 | MtrunA17_Chr4g0015151 | 54.118 | 85 | 39 | 0 | 1 | 85 | 5 | 89 | 4.63e-24 | 93.6 |
| Msa0113130 | MtrunA17_Chr7g0259411 | 67.164 | 67 | 22 | 0 | 1 | 67 | 1 | 67 | 1.23e-22 | 90.9 |
| Msa0113130 | MtrunA17_Chr4g0009571 | 52.381 | 84 | 37 | 1 | 2 | 85 | 4 | 84 | 1.49e-22 | 89.7 |
| Msa0113130 | MtrunA17_Chr7g0214701 | 53.571 | 84 | 36 | 1 | 2 | 85 | 4 | 84 | 3.67e-21 | 85.5 |
| Msa0113130 | MtrunA17_Chr8g0392111 | 70.690 | 58 | 13 | 2 | 1 | 57 | 1 | 55 | 4.26e-17 | 72.8 |
| Msa0113130 | MtrunA17_Chr4g0074721 | 54.762 | 84 | 22 | 3 | 3 | 85 | 2 | 70 | 1.75e-16 | 72.4 |
| Msa0113130 | MtrunA17_Chr4g0015161 | 60.377 | 53 | 21 | 0 | 33 | 85 | 8 | 60 | 2.68e-16 | 71.6 |
| Msa0113130 | MtrunA17_Chr4g0076881 | 82.500 | 40 | 7 | 0 | 145 | 184 | 980 | 1019 | 1.08e-13 | 69.7 |
| Msa0113130 | MtrunA17_Chr4g0067031 | 50.000 | 86 | 36 | 3 | 2 | 85 | 235 | 315 | 6.32e-13 | 67.0 |
| Msa0113130 | MtrunA17_Chr8g0381421 | 76.471 | 34 | 8 | 0 | 34 | 67 | 1 | 34 | 1.73e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113130 | AT5G42190.1 | 64.646 | 99 | 19 | 1 | 3 | 85 | 2 | 100 | 1.28e-36 | 126 |
| Msa0113130 | AT1G75950.1 | 63.158 | 95 | 29 | 1 | 4 | 92 | 2 | 96 | 3.47e-36 | 125 |
| Msa0113130 | AT1G20140.1 | 69.565 | 92 | 21 | 2 | 1 | 85 | 1 | 92 | 6.22e-36 | 124 |
| Msa0113130 | AT2G25700.1 | 67.391 | 92 | 23 | 2 | 1 | 85 | 1 | 92 | 5.60e-34 | 119 |
| Msa0113130 | AT3G60010.1 | 59.524 | 84 | 27 | 2 | 5 | 85 | 2 | 81 | 2.36e-27 | 102 |
| Msa0113130 | AT4G34210.1 | 55.435 | 92 | 37 | 2 | 4 | 94 | 2 | 90 | 2.92e-26 | 99.4 |
| Msa0113130 | AT4G34470.1 | 55.435 | 92 | 37 | 2 | 4 | 94 | 2 | 90 | 4.49e-26 | 99.0 |
| Msa0113130 | AT3G21860.1 | 63.095 | 84 | 25 | 3 | 4 | 85 | 2 | 81 | 2.38e-25 | 97.1 |
| Msa0113130 | AT3G21850.1 | 60.714 | 84 | 28 | 3 | 4 | 85 | 2 | 82 | 3.56e-24 | 94.0 |
| Msa0113130 | AT2G20160.1 | 56.098 | 82 | 31 | 1 | 4 | 85 | 2 | 78 | 6.94e-24 | 93.2 |
| Msa0113130 | AT3G21840.1 | 46.154 | 117 | 57 | 3 | 4 | 118 | 2 | 114 | 6.11e-23 | 90.1 |
| Msa0113130 | AT2G03190.1 | 52.128 | 94 | 33 | 2 | 4 | 85 | 2 | 95 | 2.19e-22 | 90.1 |
| Msa0113130 | AT2G03170.1 | 53.659 | 82 | 32 | 1 | 4 | 85 | 2 | 77 | 2.67e-22 | 89.0 |
| Msa0113130 | AT2G03160.1 | 63.492 | 63 | 23 | 0 | 4 | 66 | 2 | 64 | 3.75e-21 | 87.4 |
| Msa0113130 | AT3G60020.1 | 56.962 | 79 | 28 | 1 | 7 | 85 | 4 | 76 | 4.15e-21 | 86.3 |
| Msa0113130 | AT3G21830.1 | 41.379 | 116 | 64 | 2 | 4 | 118 | 2 | 114 | 1.71e-19 | 82.0 |
| Msa0113130 | AT1G10230.1 | 51.807 | 83 | 38 | 1 | 4 | 84 | 2 | 84 | 5.98e-19 | 80.5 |
| Msa0113130 | AT3G25650.1 | 48.387 | 93 | 37 | 3 | 4 | 85 | 2 | 94 | 3.56e-18 | 79.0 |
| Msa0113130 | AT3G53060.1 | 67.273 | 55 | 12 | 1 | 31 | 85 | 3 | 51 | 1.12e-16 | 72.4 |
| Msa0113130 | AT2G02560.1 | 70.000 | 40 | 12 | 0 | 145 | 184 | 981 | 1020 | 1.04e-11 | 64.3 |
| Msa0113130 | AT2G02560.2 | 70.000 | 40 | 12 | 0 | 145 | 184 | 979 | 1018 | 1.05e-11 | 64.3 |
Find 49 sgRNAs with CRISPR-Local
Find 1137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTAATCCAAAACCATTTA+AGG | 0.093353 | 1_3:+28846017 | Msa0113130:CDS |
| ATGGATTATAGTACCTTAAA+TGG | 0.199874 | 1_3:-28846030 | None:intergenic |
| TATAGTACCTTAAATGGTTT+TGG | 0.228977 | 1_3:-28846024 | None:intergenic |
| TTATTTGCAAAATGTTTAAA+TGG | 0.231677 | 1_3:-28847695 | None:intergenic |
| ATCATTTCTGATGCTTATAA+AGG | 0.283054 | 1_3:+28847956 | Msa0113130:CDS |
| ATCAGAAATGATGATATTTC+AGG | 0.288884 | 1_3:-28847945 | None:intergenic |
| GCAAAATGTTTAAATGGAAA+TGG | 0.319848 | 1_3:-28847689 | None:intergenic |
| GGTCGATGAAGCGGTTGCTT+TGG | 0.364221 | 1_3:+28830520 | Msa0113130:CDS |
| TGTTTAAATGGAAATGGAAC+TGG | 0.378548 | 1_3:-28847683 | None:intergenic |
| CAACGTTACCAGCAAGATCT+TGG | 0.386921 | 1_3:+28830604 | Msa0113130:CDS |
| ACCACGAAGTCCGAATCTTC+AGG | 0.392119 | 1_3:-28848970 | None:intergenic |
| CGAGGATGAGCTTAAGTCTT+GGG | 0.409245 | 1_3:+28830688 | Msa0113130:CDS |
| ATGAATACCTTGAAGATGAT+TGG | 0.427316 | 1_3:+28847608 | Msa0113130:CDS |
| TGGGAAGTTGTTGAAGCCTT+AGG | 0.435672 | 1_3:+28849039 | Msa0113130:CDS |
| CACCTTCGCCAAGATCTTGC+TGG | 0.436666 | 1_3:-28830612 | None:intergenic |
| ATGATCTCATCTATCTTCTC+TGG | 0.437433 | 1_3:-28847918 | None:intergenic |
| AGCTTTGCCAATCATCTTCA+AGG | 0.443042 | 1_3:-28847615 | None:intergenic |
| TCCTGAAGATTCGGACTTCG+TGG | 0.446703 | 1_3:+28848969 | Msa0113130:CDS |
| GACTTAAGCTCATCCTCGTT+AGG | 0.455978 | 1_3:-28830683 | None:intergenic |
| TTGCGGAAATCCTGAAGATT+CGG | 0.468308 | 1_3:+28848960 | Msa0113130:CDS |
| AAGATCTTGCTGGTAACGTT+GGG | 0.477857 | 1_3:-28830602 | None:intergenic |
| AGATTCGGACTTCGTGGTAT+CGG | 0.485144 | 1_3:+28848975 | Msa0113130:CDS |
| TGCTGGTAACGTTGGGAAGA+GGG | 0.508109 | 1_3:-28830595 | None:intergenic |
| TCAGAAATGATGATATTTCA+GGG | 0.522896 | 1_3:-28847944 | None:intergenic |
| ATATAATGAATCCTCTTCAA+TGG | 0.523198 | 1_3:+28849014 | Msa0113130:CDS |
| TTGCTGGTAACGTTGGGAAG+AGG | 0.523250 | 1_3:-28830596 | None:intergenic |
| ATGAATCCTCTTCAATGGTG+TGG | 0.529085 | 1_3:+28849019 | Msa0113130:CDS |
| CAAGATCTTGCTGGTAACGT+TGG | 0.530853 | 1_3:-28830603 | None:intergenic |
| ACAACTTGTTCCTGCACTCA+AGG | 0.540025 | 1_3:+28847725 | Msa0113130:CDS |
| ACGAGGATGAGCTTAAGTCT+TGG | 0.544399 | 1_3:+28830687 | Msa0113130:CDS |
| AACTTCCCACACCATTGAAG+AGG | 0.552924 | 1_3:-28849025 | None:intergenic |
| TGAATCCTCTTCAATGGTGT+GGG | 0.553893 | 1_3:+28849020 | Msa0113130:CDS |
| AGTTCAGATACCTTGAGTGC+AGG | 0.556710 | 1_3:-28847735 | None:intergenic |
| GATTCATTATATCCACAGCT+TGG | 0.564746 | 1_3:-28849003 | None:intergenic |
| GGGAAGAGGGATTCCACTGT+CGG | 0.568035 | 1_3:-28830582 | None:intergenic |
| GAAGATGATTGCGCCGACAG+TGG | 0.570141 | 1_3:+28830569 | Msa0113130:CDS |
| GGCAAAGCTAGAGTGGCTCA+TGG | 0.570878 | 1_3:+28847629 | Msa0113130:CDS |
| AATGGAACTGGATTAGAATG+AGG | 0.584729 | 1_3:-28847671 | None:intergenic |
| GATGATTGGCAAAGCTAGAG+TGG | 0.585733 | 1_3:+28847622 | Msa0113130:CDS |
| AAGAGAATTACAGAACAAGC+TGG | 0.595621 | 1_3:+28845982 | Msa0113130:CDS |
| ATCACTCTCAAGAGTTCCGA+CGG | 0.604938 | 1_3:+28830485 | Msa0113130:CDS |
| GACCTTCGAGGTCGATGAAG+CGG | 0.610768 | 1_3:+28830511 | Msa0113130:CDS |
| TTCCGACGGTGAGACCTTCG+AGG | 0.613590 | 1_3:+28830499 | Msa0113130:CDS |
| AACCGCTTCATCGACCTCGA+AGG | 0.623664 | 1_3:-28830513 | None:intergenic |
| TACCAGCAAGATCTTGGCGA+AGG | 0.627734 | 1_3:+28830610 | Msa0113130:CDS |
| GTATCGGAATAGCCAAGCTG+TGG | 0.646489 | 1_3:+28848991 | Msa0113130:CDS |
| GACCTCGAAGGTCTCACCGT+CGG | 0.662584 | 1_3:-28830501 | None:intergenic |
| TGCTGAAGACAAACCTAACG+AGG | 0.677963 | 1_3:+28830670 | Msa0113130:CDS |
| GCTTATAAAGGATAATGACA+AGG | 0.700504 | 1_3:+28847968 | Msa0113130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAAAATATTAAAAA+TGG | + | chr1_3:28836168-28836187 | Msa0113130:intron | 0.0% |
| !! | AAAATAAAAATATTAAAAAT+GGG | + | chr1_3:28836169-28836188 | Msa0113130:intron | 0.0% |
| !! | AAAAGTAATAGAATAAAAAT+GGG | - | chr1_3:28832644-28832663 | None:intergenic | 10.0% |
| !! | TAAAAGTAATAGAATAAAAA+TGG | - | chr1_3:28832645-28832664 | None:intergenic | 10.0% |
| !!! | CTATTTTATTATATGATTTA+GGG | + | chr1_3:28832764-28832783 | Msa0113130:intron | 10.0% |
| !!! | AATATTAATATTTTGGTTAA+TGG | + | chr1_3:28832859-28832878 | Msa0113130:intron | 10.0% |
| !!! | ATATTAATATTTTGGTTAAT+GGG | + | chr1_3:28832860-28832879 | Msa0113130:intron | 10.0% |
| !! | AGAAAATATCTATTTATTTA+AGG | - | chr1_3:28834722-28834741 | None:intergenic | 10.0% |
| !! | AGTATTATAACAATATATAT+TGG | + | chr1_3:28834963-28834982 | Msa0113130:intron | 10.0% |
| !!! | TCTAATACAATTTTATATAT+CGG | + | chr1_3:28835022-28835041 | Msa0113130:intron | 10.0% |
| !!! | ACAAATTAACTTTTTTTTTT+TGG | - | chr1_3:28835193-28835212 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAGTTAATTTG+TGG | + | chr1_3:28835192-28835211 | Msa0113130:intron | 10.0% |
| !!! | AAAAAAAAAAGTTAATTTGT+GGG | + | chr1_3:28835193-28835212 | Msa0113130:intron | 10.0% |
| !! | TATGATCAAATATAAAAATT+GGG | - | chr1_3:28835680-28835699 | None:intergenic | 10.0% |
| !! | ATTAATTAAATAATTAAGAC+GGG | - | chr1_3:28835940-28835959 | None:intergenic | 10.0% |
| !!! | TTTAAATGAAATTTTTATGT+TGG | + | chr1_3:28837933-28837952 | Msa0113130:intron | 10.0% |
| !!! | TTAAATGAAATTTTTATGTT+GGG | + | chr1_3:28837934-28837953 | Msa0113130:intron | 10.0% |
| !! | ATAATAAAATTATATAACCT+AGG | + | chr1_3:28838878-28838897 | Msa0113130:intron | 10.0% |
| !! | TAAGAATATATTTAATAGTA+AGG | + | chr1_3:28838970-28838989 | Msa0113130:intron | 10.0% |
| !!! | TAAAATAAATATTAAGTTGT+GGG | - | chr1_3:28842704-28842723 | None:intergenic | 10.0% |
| !!! | ATAAAATAAATATTAAGTTG+TGG | - | chr1_3:28842705-28842724 | None:intergenic | 10.0% |
| !! | AATAATTAAATAATTGAAAC+GGG | + | chr1_3:28842834-28842853 | Msa0113130:intron | 10.0% |
| !!! | TATAATTATTTAGAATAATG+AGG | - | chr1_3:28844704-28844723 | None:intergenic | 10.0% |
| !! | AGAAAAATAATTAAATAACA+AGG | + | chr1_3:28844895-28844914 | Msa0113130:intron | 10.0% |
| !! | TAATTAATTTATTATGTACA+TGG | + | chr1_3:28846903-28846922 | Msa0113130:intron | 10.0% |
| !!! | GATTTTTTTATTTTTTTTGA+AGG | - | chr1_3:28847218-28847237 | None:intergenic | 10.0% |
| !!! | GTATATTCTAAATTTTTTAT+AGG | + | chr1_3:28847821-28847840 | Msa0113130:intron | 10.0% |
| !! | TAAAATAATATAAATTGGAT+AGG | - | chr1_3:28848219-28848238 | None:intergenic | 10.0% |
| !! | AGTAATAATAATAAGATAAA+AGG | - | chr1_3:28848735-28848754 | None:intergenic | 10.0% |
| !!! | NNNTTTTTGTGTTGAAAATT+TGG | + | chr1_3:28830829-28830848 | Msa0113130:intron | 15.0% |
| !! | GAAATATTTATTTGATCAAA+AGG | + | chr1_3:28830905-28830924 | Msa0113130:intron | 15.0% |
| !!! | TTTTTCAATTCATTATTATC+AGG | - | chr1_3:28831305-28831324 | None:intergenic | 15.0% |
| !! | AAAGTAATAGAATAAAAATG+GGG | - | chr1_3:28832643-28832662 | None:intergenic | 15.0% |
| !!! | GCTATTTTATTATATGATTT+AGG | + | chr1_3:28832763-28832782 | Msa0113130:intron | 15.0% |
| !!! | GGAGTAAAATATTAATATTT+TGG | + | chr1_3:28832852-28832871 | Msa0113130:intron | 15.0% |
| !! | TTATACATATTATTAGTGAA+AGG | - | chr1_3:28833106-28833125 | None:intergenic | 15.0% |
| !! | AAAATAAAGTTGAATTATGT+TGG | + | chr1_3:28834598-28834617 | Msa0113130:intron | 15.0% |
| !! | AAATAAAGTTGAATTATGTT+GGG | + | chr1_3:28834599-28834618 | Msa0113130:intron | 15.0% |
| !! | TTTATTAAGATTCTTTATGT+TGG | + | chr1_3:28834696-28834715 | Msa0113130:intron | 15.0% |
| !! | AATAATTAATATTACGTTGT+TGG | + | chr1_3:28834798-28834817 | Msa0113130:intron | 15.0% |
| !! | ATAATTAATATTACGTTGTT+GGG | + | chr1_3:28834799-28834818 | Msa0113130:intron | 15.0% |
| !! | GATATATAAAATTGTATTAG+AGG | - | chr1_3:28835023-28835042 | None:intergenic | 15.0% |
| !!! | CTAATACAATTTTATATATC+GGG | + | chr1_3:28835023-28835042 | Msa0113130:intron | 15.0% |
| !!! | TTTTGAAAAAGTTAAATAGA+TGG | + | chr1_3:28835305-28835324 | Msa0113130:intron | 15.0% |
| !!! | TTATATATTTTAAACATCCT+TGG | - | chr1_3:28835639-28835658 | None:intergenic | 15.0% |
| !! | CTATGATCAAATATAAAAAT+TGG | - | chr1_3:28835681-28835700 | None:intergenic | 15.0% |
| !!! | TTTTTAATCTTCGTTTTTTT+AGG | + | chr1_3:28835701-28835720 | Msa0113130:intron | 15.0% |
| !! | ACTAACTTTCAATATTATTA+AGG | + | chr1_3:28836369-28836388 | Msa0113130:intron | 15.0% |
| !! | CTAACTTTCAATATTATTAA+GGG | + | chr1_3:28836370-28836389 | Msa0113130:intron | 15.0% |
| !! | ATCTTATAAATTCCATTAAA+TGG | - | chr1_3:28837094-28837113 | None:intergenic | 15.0% |
| !!! | TTTATGATGTTAAATTTTGA+AGG | + | chr1_3:28837839-28837858 | Msa0113130:intron | 15.0% |
| !!! | AGAGTATTTAATTCATAAAA+GGG | - | chr1_3:28837911-28837930 | None:intergenic | 15.0% |
| !! | ATTATTTAATAACTATCGTT+GGG | - | chr1_3:28838951-28838970 | None:intergenic | 15.0% |
| !! | TATTATTTAATAACTATCGT+TGG | - | chr1_3:28838952-28838971 | None:intergenic | 15.0% |
| !!! | AAATTTTTATGTTAGGAAAA+CGG | - | chr1_3:28839339-28839358 | None:intergenic | 15.0% |
| !!! | ATATGTGAAATTTTTATGTT+AGG | - | chr1_3:28839346-28839365 | None:intergenic | 15.0% |
| !!! | ATTTATGAAAATTTTACGTT+GGG | - | chr1_3:28839687-28839706 | None:intergenic | 15.0% |
| !!! | TATTTATGAAAATTTTACGT+TGG | - | chr1_3:28839688-28839707 | None:intergenic | 15.0% |
| !! | CATTTCTTAAAAATCATAAA+TGG | + | chr1_3:28839742-28839761 | Msa0113130:intron | 15.0% |
| !!! | TTTTATGAGATTTTATATTG+AGG | - | chr1_3:28839866-28839885 | None:intergenic | 15.0% |
| !! | TTTCACAAAACAATAATATT+AGG | + | chr1_3:28840086-28840105 | Msa0113130:intron | 15.0% |
| !! | TAGAAATAAATAAGATTATG+AGG | - | chr1_3:28842360-28842379 | None:intergenic | 15.0% |
| !! | GTGTATTAATATTATTAAGT+GGG | - | chr1_3:28842401-28842420 | None:intergenic | 15.0% |
| !!! | AATATATTTGTTATTTTGTG+TGG | - | chr1_3:28842548-28842567 | None:intergenic | 15.0% |
| !!! | AAAATAAATATTAAGTTGTG+GGG | - | chr1_3:28842703-28842722 | None:intergenic | 15.0% |
| !!! | AAAATTATCTAAAACTTTCA+TGG | + | chr1_3:28843774-28843793 | Msa0113130:intron | 15.0% |
| !! | TTAATGTCATATTATGAATT+GGG | - | chr1_3:28844343-28844362 | None:intergenic | 15.0% |
| !! | ATTTATTAGAGTATATTTAG+TGG | - | chr1_3:28844800-28844819 | None:intergenic | 15.0% |
| !! | AAAATAATTAAATAACAAGG+AGG | + | chr1_3:28844898-28844917 | Msa0113130:intron | 15.0% |
| !! | AAATAATTAAATAACAAGGA+GGG | + | chr1_3:28844899-28844918 | Msa0113130:intron | 15.0% |
| !! | ATTATGTAATCATAGAAAAT+AGG | + | chr1_3:28845663-28845682 | Msa0113130:intron | 15.0% |
| !! | TGTATATATAAATCAAAAGT+AGG | - | chr1_3:28845809-28845828 | None:intergenic | 15.0% |
| !! | TAGTAAAATTAATAAGCATA+AGG | - | chr1_3:28846076-28846095 | None:intergenic | 15.0% |
| !!! | ATTAATTTTACTACTTGTTT+TGG | + | chr1_3:28846083-28846102 | Msa0113130:intron | 15.0% |
| !!! | TTTTAGTACATTTCAATTAA+AGG | + | chr1_3:28846362-28846381 | Msa0113130:intron | 15.0% |
| !!! | GTTTTTTTTTTTTTTGAAGA+AGG | - | chr1_3:28846460-28846479 | None:intergenic | 15.0% |
| !! | AATAAAACATAAAATACATG+AGG | + | chr1_3:28846598-28846617 | Msa0113130:intron | 15.0% |
| !!! | GCATATATATACTTATTTTT+TGG | - | chr1_3:28847178-28847197 | None:intergenic | 15.0% |
| !! | TTATTTGCAAAATGTTTAAA+TGG | - | chr1_3:28847698-28847717 | None:intergenic | 15.0% |
| !!! | ATAACTATTAGGAATTTTTA+AGG | - | chr1_3:28848409-28848428 | None:intergenic | 15.0% |
| !! | AATTCACTATAATAACTATT+AGG | - | chr1_3:28848420-28848439 | None:intergenic | 15.0% |
| !!! | TTTCTATATGATAATTCTTT+TGG | + | chr1_3:28848891-28848910 | Msa0113130:intron | 15.0% |
| !! | ATTTGGAGACATTATTTATA+TGG | + | chr1_3:28830846-28830865 | Msa0113130:intron | 20.0% |
| !!! | TTGTTGAAAGATTATGATTT+TGG | + | chr1_3:28830960-28830979 | Msa0113130:intron | 20.0% |
| !!! | TTATGTGAAATATGTGTTTT+TGG | + | chr1_3:28832714-28832733 | Msa0113130:intron | 20.0% |
| !! | TTATTATTTGTGGAAACATT+AGG | + | chr1_3:28832816-28832835 | Msa0113130:intron | 20.0% |
| !! | ACATTAGGAGAAATAAAAAT+AGG | + | chr1_3:28832831-28832850 | Msa0113130:intron | 20.0% |
| !! | AAGAGAGTTAAGAAAAATAA+AGG | + | chr1_3:28832908-28832927 | Msa0113130:intron | 20.0% |
| !!! | AAAAGAAAACATAAGCTTTT+GGG | + | chr1_3:28832989-28833008 | Msa0113130:intron | 20.0% |
| !!! | AACATTGTTCTAATTCATTT+TGG | + | chr1_3:28833265-28833284 | Msa0113130:intron | 20.0% |
| !!! | ACATTGTTCTAATTCATTTT+GGG | + | chr1_3:28833266-28833285 | Msa0113130:intron | 20.0% |
| !!! | ATCAAAACTTAATTGCTTTT+GGG | + | chr1_3:28833773-28833792 | Msa0113130:intron | 20.0% |
| !!! | CTTTTATGTATCACATATTT+TGG | + | chr1_3:28834543-28834562 | Msa0113130:intron | 20.0% |
| !! | AATAAAGTTGAATTATGTTG+GGG | + | chr1_3:28834600-28834619 | Msa0113130:intron | 20.0% |
| !!! | TTTTCATTGATGTTGAATTT+TGG | + | chr1_3:28834637-28834656 | Msa0113130:intron | 20.0% |
| !!! | TAGAAAACACTCAAATTTTT+TGG | - | chr1_3:28834895-28834914 | None:intergenic | 20.0% |
| !! | ATATAAAATTGTATTAGAGG+AGG | - | chr1_3:28835020-28835039 | None:intergenic | 20.0% |
| !!! | TAGCTATATCAATTAATTTG+TGG | + | chr1_3:28835161-28835180 | Msa0113130:intron | 20.0% |
| !!! | AGCTATATCAATTAATTTGT+GGG | + | chr1_3:28835162-28835181 | Msa0113130:intron | 20.0% |
| !! | TTACATTTAGATAAACCTTA+AGG | + | chr1_3:28835391-28835410 | Msa0113130:intron | 20.0% |
| !! | TACATTTAGATAAACCTTAA+GGG | + | chr1_3:28835392-28835411 | Msa0113130:intron | 20.0% |
| !! | AAATTGATTAATGAAAGCAA+AGG | + | chr1_3:28835591-28835610 | Msa0113130:intron | 20.0% |
| !! | ATATGATTTATAAAGTTGAG+TGG | + | chr1_3:28836044-28836063 | Msa0113130:intron | 20.0% |
| !!! | ATTTTGTGAAGTTATTATGT+TGG | + | chr1_3:28836104-28836123 | Msa0113130:intron | 20.0% |
| !! | AAAATGAATTTAGCATGATT+AGG | + | chr1_3:28836404-28836423 | Msa0113130:intron | 20.0% |
| !!! | TGTAGTCATGAATTAATTTT+AGG | + | chr1_3:28836813-28836832 | Msa0113130:intron | 20.0% |
| !!! | AATTAATTTTAGGAGTATGA+AGG | + | chr1_3:28836823-28836842 | Msa0113130:intron | 20.0% |
| !! | AGAATGCATTAACATTAATT+GGG | - | chr1_3:28836969-28836988 | None:intergenic | 20.0% |
| !! | TAGAATGCATTAACATTAAT+TGG | - | chr1_3:28836970-28836989 | None:intergenic | 20.0% |
| !!! | CAGAGTATTTAATTCATAAA+AGG | - | chr1_3:28837912-28837931 | None:intergenic | 20.0% |
| !!! | AATTTTTATGTTGGGAAATA+CGG | + | chr1_3:28837942-28837961 | Msa0113130:intron | 20.0% |
| !!! | TTGAAAATTTTGTTGATGTT+TGG | + | chr1_3:28838089-28838108 | Msa0113130:intron | 20.0% |
| !!! | TGAAAATTTTGTTGATGTTT+GGG | + | chr1_3:28838090-28838109 | Msa0113130:intron | 20.0% |
| !!! | TTATATGAGTTGAGAATTTT+CGG | - | chr1_3:28838434-28838453 | None:intergenic | 20.0% |
| !! | TAAAATTATATAACCTAGGT+CGG | + | chr1_3:28838882-28838901 | Msa0113130:intron | 20.0% |
| !!! | TTCTTTTAAAATAAATCCAC+TGG | + | chr1_3:28839039-28839058 | Msa0113130:intron | 20.0% |
| !!! | AATTTTTATGTTAGGAAAAC+GGG | - | chr1_3:28839338-28839357 | None:intergenic | 20.0% |
| !! | CACTTCTTAAAAATCATAAA+TGG | + | chr1_3:28839399-28839418 | Msa0113130:intron | 20.0% |
| !! | TTGACAACTTAAATAATCTT+TGG | + | chr1_3:28839832-28839851 | Msa0113130:intron | 20.0% |
| !!! | ACCAGTTTTCATTTTAAATT+CGG | + | chr1_3:28841446-28841465 | Msa0113130:intron | 20.0% |
| !!! | TTCAAGTTTTATATGGATTT+GGG | - | chr1_3:28841797-28841816 | None:intergenic | 20.0% |
| !!! | GTTTTAGTTCAAGTTTTATA+TGG | - | chr1_3:28841804-28841823 | None:intergenic | 20.0% |
| !!! | TTTTGATGATTAGAGAAATT+AGG | - | chr1_3:28842022-28842041 | None:intergenic | 20.0% |
| !! | AGTGAATAATTGAGAATTAA+TGG | - | chr1_3:28842059-28842078 | None:intergenic | 20.0% |
| !! | GGTGTATTAATATTATTAAG+TGG | - | chr1_3:28842402-28842421 | None:intergenic | 20.0% |
| !!! | ATATGCTATTATGTGTTATT+TGG | - | chr1_3:28842423-28842442 | None:intergenic | 20.0% |
| !! | GTGTAGAAATATATGTTATT+TGG | - | chr1_3:28842625-28842644 | None:intergenic | 20.0% |
| !! | GTTAATGTCATATTATGAAT+TGG | - | chr1_3:28844344-28844363 | None:intergenic | 20.0% |
| !!! | TAGGTTTAATTTTTGTGAAT+TGG | - | chr1_3:28844443-28844462 | None:intergenic | 20.0% |
| !! | AATTTCATTTAACATGTTGT+AGG | - | chr1_3:28844462-28844481 | None:intergenic | 20.0% |
| !!! | AATCAATCAATCTAAAGTAA+GGG | - | chr1_3:28844525-28844544 | None:intergenic | 20.0% |
| !! | AAGAGAAAATAAATAGGTTA+AGG | - | chr1_3:28844660-28844679 | None:intergenic | 20.0% |
| !! | GGAATTAAGAGAAAATAAAT+AGG | - | chr1_3:28844666-28844685 | None:intergenic | 20.0% |
| !!! | TATGTTGATATTTTATTGAG+TGG | - | chr1_3:28844835-28844854 | None:intergenic | 20.0% |
| !! | AAAACAACACAACAAAATAA+GGG | + | chr1_3:28844961-28844980 | Msa0113130:intron | 20.0% |
| !!! | TTTTCCCTATTATTATGTTA+TGG | - | chr1_3:28845000-28845019 | None:intergenic | 20.0% |
| !!! | TTTTGAAATTTTGATGAACT+TGG | + | chr1_3:28845267-28845286 | Msa0113130:intron | 20.0% |
| !!! | AGACAATTTTCATACTAATA+TGG | + | chr1_3:28845628-28845647 | Msa0113130:intron | 20.0% |
| !! | AATCATAGAAAATAGGAATT+AGG | + | chr1_3:28845670-28845689 | Msa0113130:intron | 20.0% |
| !! | ATAAAGTTAAATGTTAACAG+TGG | - | chr1_3:28846205-28846224 | None:intergenic | 20.0% |
| !! | AAAAAATTGGAAAATGATGA+CGG | - | chr1_3:28846496-28846515 | None:intergenic | 20.0% |
| !! | AATCAAAATTGATTAAGTAG+TGG | + | chr1_3:28846687-28846706 | Msa0113130:intron | 20.0% |
| !!! | TTATTTAAGTTAAGCTGATA+TGG | - | chr1_3:28846730-28846749 | None:intergenic | 20.0% |
| !! | TATCAGCTTAACTTAAATAA+TGG | + | chr1_3:28846730-28846749 | Msa0113130:intron | 20.0% |
| !! | AGAAATAGTTCAATTAACTA+TGG | - | chr1_3:28846800-28846819 | None:intergenic | 20.0% |
| !! | ACATCTATAAGATATTTGTA+TGG | - | chr1_3:28847139-28847158 | None:intergenic | 20.0% |
| !!! | TGACTTGCATATTTTATATT+TGG | + | chr1_3:28847787-28847806 | Msa0113130:intron | 20.0% |
| !!! | AGTAATGTAACAATTTTCTT+TGG | + | chr1_3:28848024-28848043 | Msa0113130:intron | 20.0% |
| !! | ACTATATTATAATGTTCTGA+TGG | + | chr1_3:28848255-28848274 | Msa0113130:intron | 20.0% |
| !! | GATACTTTACTAGAAATAAT+AGG | + | chr1_3:28848377-28848396 | Msa0113130:intron | 20.0% |
| ! | ACTGAATAAGTGATATTGAT+CGG | - | chr1_3:28831647-28831666 | None:intergenic | 25.0% |
| !!! | AATCATTAGAAGATTTGTTG+AGG | + | chr1_3:28831858-28831877 | Msa0113130:intron | 25.0% |
| !!! | ATCATTAGAAGATTTGTTGA+GGG | + | chr1_3:28831859-28831878 | Msa0113130:intron | 25.0% |
| ! | ATTCTCTCAGATATTTGATA+AGG | - | chr1_3:28832265-28832284 | None:intergenic | 25.0% |
| ! | TATCAAATATCTGAGAGAAT+TGG | + | chr1_3:28832265-28832284 | Msa0113130:intron | 25.0% |
| !! | TGGTGATTTTATGTGATATA+TGG | + | chr1_3:28832734-28832753 | Msa0113130:intron | 25.0% |
| ! | GAGTATGACTTTATTATTTG+TGG | + | chr1_3:28832806-28832825 | Msa0113130:intron | 25.0% |
| ! | AGTTAAGAAAAATAAAGGAG+AGG | + | chr1_3:28832913-28832932 | Msa0113130:intron | 25.0% |
| !! | CAAAAGAAAACATAAGCTTT+TGG | + | chr1_3:28832988-28833007 | Msa0113130:intron | 25.0% |
| !!! | CTTTTGATTCATCTAAACTA+AGG | + | chr1_3:28833067-28833086 | Msa0113130:intron | 25.0% |
| ! | ATTCATCTAAACTAAGGTAA+GGG | + | chr1_3:28833073-28833092 | Msa0113130:intron | 25.0% |
| !!! | GTTTTAGGTTTAGAAGTTTT+AGG | + | chr1_3:28833157-28833176 | Msa0113130:intron | 25.0% |
| !!! | TAGAAGTTTTAGGTTAATTG+AGG | + | chr1_3:28833167-28833186 | Msa0113130:intron | 25.0% |
| ! | TGAATTAGAACAATGTTTAC+AGG | - | chr1_3:28833262-28833281 | None:intergenic | 25.0% |
| ! | AGCTAATTCAAAACAGAAAT+GGG | - | chr1_3:28833503-28833522 | None:intergenic | 25.0% |
| ! | AAGCTAATTCAAAACAGAAA+TGG | - | chr1_3:28833504-28833523 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTGAATTAGCTTT+CGG | + | chr1_3:28833505-28833524 | Msa0113130:intron | 25.0% |
| !!! | TAATTGAGTTAGCTTTCTAA+TGG | + | chr1_3:28833549-28833568 | Msa0113130:intron | 25.0% |
| ! | TATGATAAAAATAGTCCAAG+TGG | + | chr1_3:28833610-28833629 | Msa0113130:intron | 25.0% |
| ! | ATGATAAAAATAGTCCAAGT+GGG | + | chr1_3:28833611-28833630 | Msa0113130:intron | 25.0% |
| !!! | ATAAGTTTTTGGACTAACTT+GGG | - | chr1_3:28833674-28833693 | None:intergenic | 25.0% |
| !! | TAACACTTAAGTTTGAAGTT+GGG | - | chr1_3:28833706-28833725 | None:intergenic | 25.0% |
| ! | AACTTCAAACTTAAGTGTTA+GGG | + | chr1_3:28833706-28833725 | Msa0113130:intron | 25.0% |
| !! | GATCAAAACTTAATTGCTTT+TGG | + | chr1_3:28833772-28833791 | Msa0113130:intron | 25.0% |
| !!! | TCAAAACTTAATTGCTTTTG+GGG | + | chr1_3:28833774-28833793 | Msa0113130:intron | 25.0% |
| ! | TATCATCTAATGTCAAAGTT+GGG | + | chr1_3:28833875-28833894 | Msa0113130:intron | 25.0% |
| !! | CATAATTATTTTCAGCAACA+AGG | - | chr1_3:28834276-28834295 | None:intergenic | 25.0% |
| ! | TTCAACATCAATGAAAATCT+TGG | - | chr1_3:28834634-28834653 | None:intergenic | 25.0% |
| !!! | AAACACTCAAATTTTTTGGA+AGG | - | chr1_3:28834891-28834910 | None:intergenic | 25.0% |
| ! | TAATTGATATAGCTAATGTG+TGG | - | chr1_3:28835156-28835175 | None:intergenic | 25.0% |
| !! | AGAGTAACAATTTTAGATTG+TGG | + | chr1_3:28835268-28835287 | Msa0113130:intron | 25.0% |
| ! | GTTAAATAGATGGAAGTTAA+CGG | + | chr1_3:28835315-28835334 | Msa0113130:intron | 25.0% |
| ! | TTTGATCTTAAACCAAGTTA+GGG | - | chr1_3:28835554-28835573 | None:intergenic | 25.0% |
| !! | TTTTGATCTTAAACCAAGTT+AGG | - | chr1_3:28835555-28835574 | None:intergenic | 25.0% |
| ! | AGATGAACAAAAACTTAACA+TGG | - | chr1_3:28835791-28835810 | None:intergenic | 25.0% |
| ! | AACAAAATTCAAACTTCACT+TGG | - | chr1_3:28835851-28835870 | None:intergenic | 25.0% |
| !! | TTTGGTGAGAATTTAGAATT+AGG | + | chr1_3:28836433-28836452 | Msa0113130:intron | 25.0% |
| !! | TTGGTGAGAATTTAGAATTA+GGG | + | chr1_3:28836434-28836453 | Msa0113130:intron | 25.0% |
| ! | TAGGGTTATTTACTAATTTG+AGG | + | chr1_3:28836452-28836471 | Msa0113130:intron | 25.0% |
| !! | ATCAATCTAACATCTTTTCA+TGG | - | chr1_3:28836484-28836503 | None:intergenic | 25.0% |
| !! | GATGAAAAGTTGTGATTTTT+AGG | + | chr1_3:28836582-28836601 | Msa0113130:intron | 25.0% |
| ! | TTAAGAAGTTGTCCATTTAA+TGG | + | chr1_3:28837079-28837098 | Msa0113130:intron | 25.0% |
| ! | ATTGCATACTCATTAAAGAT+GGG | + | chr1_3:28837152-28837171 | Msa0113130:intron | 25.0% |
| ! | TATTCATAAAAAGACACGTA+AGG | - | chr1_3:28837727-28837746 | None:intergenic | 25.0% |
| ! | TTAGGAAATCTCATAAACTT+TGG | - | chr1_3:28837759-28837778 | None:intergenic | 25.0% |
| ! | GTTTATGAGATTTCCTAATA+AGG | + | chr1_3:28837761-28837780 | Msa0113130:intron | 25.0% |
| !! | ATTTTTATGTTGGGAAATAC+GGG | + | chr1_3:28837943-28837962 | Msa0113130:intron | 25.0% |
| ! | ACTTTGCTTGAGATTATTAA+TGG | - | chr1_3:28838176-28838195 | None:intergenic | 25.0% |
| !! | TCACTAAAATGCATTCTTTT+TGG | + | chr1_3:28838218-28838237 | Msa0113130:intron | 25.0% |
| !! | CACTAAAATGCATTCTTTTT+GGG | + | chr1_3:28838219-28838238 | Msa0113130:intron | 25.0% |
| ! | AATAGGTGTTTAACTATTGA+TGG | - | chr1_3:28838809-28838828 | None:intergenic | 25.0% |
| ! | AAACACCTATTAACAAAATC+AGG | + | chr1_3:28838818-28838837 | Msa0113130:intron | 25.0% |
| ! | GTCGTTCAATAATCATAAAT+AGG | + | chr1_3:28839106-28839125 | Msa0113130:intron | 25.0% |
| ! | CTACTAATAACAGAACTAAA+CGG | + | chr1_3:28839240-28839259 | Msa0113130:intron | 25.0% |
| ! | ACAATTCATCCTTCATAAAT+TGG | + | chr1_3:28839430-28839449 | Msa0113130:intron | 25.0% |
| ! | TTATGTTGACCAATTTATGA+AGG | - | chr1_3:28839442-28839461 | None:intergenic | 25.0% |
| ! | AATATTCAAAAACTTCGCAA+CGG | + | chr1_3:28839461-28839480 | Msa0113130:intron | 25.0% |
| !! | TTCAACAACATAATTAGTCT+TGG | + | chr1_3:28839491-28839510 | Msa0113130:intron | 25.0% |
| !!! | TATTACGAGATGTTTTAATG+AGG | - | chr1_3:28839525-28839544 | None:intergenic | 25.0% |
| !! | AAAATTTTACGTTGGGAAAA+CGG | - | chr1_3:28839680-28839699 | None:intergenic | 25.0% |
| !! | CAGAGTTTTTCATCATAAAA+CGG | + | chr1_3:28839712-28839731 | Msa0113130:intron | 25.0% |
| !! | TAATATTTAAAACTTCGCAG+CGG | + | chr1_3:28839803-28839822 | Msa0113130:intron | 25.0% |
| ! | TTAAATAATCTTTGGCACAA+GGG | + | chr1_3:28839840-28839859 | Msa0113130:intron | 25.0% |
| ! | GATTCATAAAGTAATACGTA+AGG | + | chr1_3:28839911-28839930 | Msa0113130:intron | 25.0% |
| !! | GTTAATGAAGTTTAAGATGT+TGG | - | chr1_3:28840133-28840152 | None:intergenic | 25.0% |
| ! | ATGAAGTTTATGACTAATGT+AGG | - | chr1_3:28840172-28840191 | None:intergenic | 25.0% |
| ! | TATGATGATTGATTATGAAG+TGG | - | chr1_3:28840529-28840548 | None:intergenic | 25.0% |
| ! | ATGAAGTTGTATATGATGAA+TGG | - | chr1_3:28840565-28840584 | None:intergenic | 25.0% |
| !!! | AAATGAAAACTGGTATTGAT+CGG | - | chr1_3:28841440-28841459 | None:intergenic | 25.0% |
| !! | TCCGAATTTAAAATGAAAAC+TGG | - | chr1_3:28841450-28841469 | None:intergenic | 25.0% |
| ! | GATTTATAGAACTTGAGTTA+TGG | - | chr1_3:28841528-28841547 | None:intergenic | 25.0% |
| !!! | TTCAGTTTTGAATTGGTTTT+AGG | - | chr1_3:28841615-28841634 | None:intergenic | 25.0% |
| ! | GAAACGTTTAAACAAACTTT+GGG | - | chr1_3:28841758-28841777 | None:intergenic | 25.0% |
| ! | AGAAACGTTTAAACAAACTT+TGG | - | chr1_3:28841759-28841778 | None:intergenic | 25.0% |
| !!! | GTTCAAGTTTTATATGGATT+TGG | - | chr1_3:28841798-28841817 | None:intergenic | 25.0% |
| !! | AATGGTGATTTTTGTTGAAA+GGG | - | chr1_3:28841828-28841847 | None:intergenic | 25.0% |
| !! | AAATGGTGATTTTTGTTGAA+AGG | - | chr1_3:28841829-28841848 | None:intergenic | 25.0% |
| ! | TTCATGAAAAATAGGTCAAA+TGG | - | chr1_3:28841846-28841865 | None:intergenic | 25.0% |
| !! | TGAAGGTTTTCATGAAAAAT+AGG | - | chr1_3:28841854-28841873 | None:intergenic | 25.0% |
| ! | TGAATTTATGTTGTTCTTGA+AGG | - | chr1_3:28841871-28841890 | None:intergenic | 25.0% |
| ! | TTGTTAATGATTGATGCAAT+GGG | - | chr1_3:28841918-28841937 | None:intergenic | 25.0% |
| ! | TTTGTTAATGATTGATGCAA+TGG | - | chr1_3:28841919-28841938 | None:intergenic | 25.0% |
| ! | GGTTATAAATAAGAGAAGTT+AGG | - | chr1_3:28842298-28842317 | None:intergenic | 25.0% |
| !!! | GAAGAGGTATATTTGTTATT+TGG | - | chr1_3:28842481-28842500 | None:intergenic | 25.0% |
| !!! | ATATTTGTTATTCAGTGAAG+AGG | - | chr1_3:28842497-28842516 | None:intergenic | 25.0% |
| ! | GTGGAAATATATATGTTATC+TGG | - | chr1_3:28842529-28842548 | None:intergenic | 25.0% |
| ! | TCATCAACATATCATAACAA+TGG | + | chr1_3:28843012-28843031 | Msa0113130:intron | 25.0% |
| ! | CTTATATGACTCCAATAATT+TGG | + | chr1_3:28843354-28843373 | Msa0113130:intron | 25.0% |
| ! | GATTTATAGAACTTGAGTTA+TGG | - | chr1_3:28841528-28841547 | None:intergenic | 25.0% |
| !!! | AAACGAAAACTAGTATTGAT+CGG | - | chr1_3:28844016-28844035 | None:intergenic | 25.0% |
| !!! | TATGGATGTTAGTTTTCTAA+TGG | - | chr1_3:28843954-28843973 | None:intergenic | 25.0% |
| !!! | AAATGAAAACTGGTATTGAT+CGG | - | chr1_3:28841440-28841459 | None:intergenic | 25.0% |
| !! | CCAGTTTTCATTTCAAAATT+CGG | + | chr1_3:28844216-28844235 | Msa0113130:intron | 25.0% |
| !! | CAGTTTTCATTTCAAAATTC+GGG | + | chr1_3:28844217-28844236 | Msa0113130:intron | 25.0% |
| !!! | GTTATGTTGTTATTGATTTG+TGG | - | chr1_3:28844385-28844404 | None:intergenic | 25.0% |
| !! | TTTTGTGAATTGGAGAATTA+GGG | - | chr1_3:28844433-28844452 | None:intergenic | 25.0% |
| !! | TTTTTGTGAATTGGAGAATT+AGG | - | chr1_3:28844434-28844453 | None:intergenic | 25.0% |
| ! | TAATCTTGATTCTATGATTC+TGG | - | chr1_3:28844486-28844505 | None:intergenic | 25.0% |
| !! | CAATCAATCAATCTAAAGTA+AGG | - | chr1_3:28844526-28844545 | None:intergenic | 25.0% |
| ! | AGGTTAAGGTTTATATAAAG+AGG | - | chr1_3:28844646-28844665 | None:intergenic | 25.0% |
| !! | ATTTAGAATAATGAGGCTTT+GGG | - | chr1_3:28844697-28844716 | None:intergenic | 25.0% |
| !! | TATTTAGAATAATGAGGCTT+TGG | - | chr1_3:28844698-28844717 | None:intergenic | 25.0% |
| !! | TAGTGGAAGTATATATTTAG+TGG | - | chr1_3:28844732-28844751 | None:intergenic | 25.0% |
| ! | TAGTGGAGAAATATATTTAG+TGG | - | chr1_3:28844749-28844768 | None:intergenic | 25.0% |
| ! | TAGTGGAAGAATATATTTAG+TGG | - | chr1_3:28844766-28844785 | None:intergenic | 25.0% |
| ! | TAGTGGAAGAATATATTTAG+TGG | - | chr1_3:28844766-28844785 | None:intergenic | 25.0% |
| !!! | TTGTGTTGTTTTCTGTATAA+TGG | - | chr1_3:28844953-28844972 | None:intergenic | 25.0% |
| ! | GAAAACAACACAACAAAATA+AGG | + | chr1_3:28844960-28844979 | Msa0113130:intron | 25.0% |
| ! | AAACAACACAACAAAATAAG+GGG | + | chr1_3:28844962-28844981 | Msa0113130:intron | 25.0% |
| ! | CATCATCATATATATGCTTA+TGG | + | chr1_3:28845157-28845176 | Msa0113130:intron | 25.0% |
| ! | TTACAAACATACAAGTGATT+GGG | - | chr1_3:28845468-28845487 | None:intergenic | 25.0% |
| ! | ATTACAAACATACAAGTGAT+TGG | - | chr1_3:28845469-28845488 | None:intergenic | 25.0% |
| ! | CACTTGTATGTTTGTAATTA+TGG | + | chr1_3:28845471-28845490 | Msa0113130:intron | 25.0% |
| ! | GGTTAAATGAAATTATCTCA+TGG | - | chr1_3:28845788-28845807 | None:intergenic | 25.0% |
| ! | ATTGACTATTTGATACAAAG+AGG | + | chr1_3:28845830-28845849 | Msa0113130:intron | 25.0% |
| !!! | CTTAAATGGTTTTGGATTAA+GGG | - | chr1_3:28846019-28846038 | None:intergenic | 25.0% |
| !! | TATAGTACCTTAAATGGTTT+TGG | - | chr1_3:28846027-28846046 | None:intergenic | 25.0% |
| !! | ATGGATTATAGTACCTTAAA+TGG | - | chr1_3:28846033-28846052 | None:intergenic | 25.0% |
| ! | AAGAACTAATGGTAACTAAA+TGG | - | chr1_3:28846052-28846071 | None:intergenic | 25.0% |
| ! | TTGGTATTAATAGAAAACAG+TGG | - | chr1_3:28846231-28846250 | None:intergenic | 25.0% |
| !! | ACTGTTTTCTATTAATACCA+AGG | + | chr1_3:28846230-28846249 | Msa0113130:intron | 25.0% |
| !!! | TATAGATTTTAGCAGTAAAG+TGG | - | chr1_3:28846256-28846275 | None:intergenic | 25.0% |
| ! | ATCTATAAGTATACCGTATA+TGG | + | chr1_3:28846269-28846288 | Msa0113130:intron | 25.0% |
| ! | CATAAAATACATGAGGAATA+AGG | + | chr1_3:28846605-28846624 | Msa0113130:intron | 25.0% |
| !! | TGAACTATTTCTTTGTTAAC+AGG | + | chr1_3:28846808-28846827 | Msa0113130:intron | 25.0% |
| ! | AAATAAACTTGCAAGTATAG+TGG | + | chr1_3:28847112-28847131 | Msa0113130:intron | 25.0% |
| ! | AAAATCTTGTATTCGATATC+TGG | + | chr1_3:28847232-28847251 | Msa0113130:intron | 25.0% |
| !!! | TTTTTTGTTAAGGCTTATCA+GGG | - | chr1_3:28847426-28847445 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTAAGGCTTATC+AGG | - | chr1_3:28847427-28847446 | None:intergenic | 25.0% |
| !!! | TGAAAGCAGATTTTTTGTTA+AGG | - | chr1_3:28847436-28847455 | None:intergenic | 25.0% |
| ! | TCATAAAAGGAAAGAAAACA+GGG | - | chr1_3:28847566-28847585 | None:intergenic | 25.0% |
| ! | ATCATAAAAGGAAAGAAAAC+AGG | - | chr1_3:28847567-28847586 | None:intergenic | 25.0% |
| ! | AAGACAATGATCATCATAAA+AGG | - | chr1_3:28847579-28847598 | None:intergenic | 25.0% |
| ! | GCAAAATGTTTAAATGGAAA+TGG | - | chr1_3:28847692-28847711 | None:intergenic | 25.0% |
| !! | CTTGCATATTTTATATTTGG+TGG | + | chr1_3:28847790-28847809 | Msa0113130:intron | 25.0% |
| ! | TCAGAAATGATGATATTTCA+GGG | - | chr1_3:28847947-28847966 | None:intergenic | 25.0% |
| ! | ATCAGAAATGATGATATTTC+AGG | - | chr1_3:28847948-28847967 | None:intergenic | 25.0% |
| ! | ATCATTTCTGATGCTTATAA+AGG | + | chr1_3:28847956-28847975 | Msa0113130:CDS | 25.0% |
| ! | CAATAACATGTCATAATTTG+TGG | - | chr1_3:28848290-28848309 | None:intergenic | 25.0% |
| ! | CACAAATTATGACATGTTAT+TGG | + | chr1_3:28848288-28848307 | Msa0113130:intron | 25.0% |
| ! | ATAGATTAATGCTAAGGTTA+TGG | - | chr1_3:28848484-28848503 | None:intergenic | 25.0% |
| !!! | GATTCTAGTTCTAGATTAAA+TGG | - | chr1_3:28848511-28848530 | None:intergenic | 25.0% |
| ! | GCAAATTGTATGAGATTATA+AGG | - | chr1_3:28848533-28848552 | None:intergenic | 25.0% |
| !!! | ATTTTAAAATCCTCTACATC+AGG | + | chr1_3:28848588-28848607 | Msa0113130:intron | 25.0% |
| ! | ATATAATGAATCCTCTTCAA+TGG | + | chr1_3:28849014-28849033 | Msa0113130:CDS | 25.0% |
| ATCACTAAACACTTCAAATC+TGG | - | chr1_3:28830874-28830893 | None:intergenic | 30.0% | |
| ATCAAAAGGAGTTGAATATG+AGG | + | chr1_3:28830919-28830938 | Msa0113130:intron | 30.0% | |
| !!! | TTTTGGCTTAAATTACCATC+CGG | + | chr1_3:28830977-28830996 | Msa0113130:intron | 30.0% |
| !! | CTTAAGTCTTGTTTGTGAAT+TGG | + | chr1_3:28831097-28831116 | Msa0113130:intron | 30.0% |
| TGTGAAATTTGTAGACTTGA+TGG | + | chr1_3:28831199-28831218 | Msa0113130:intron | 30.0% | |
| GTGAAATTTGTAGACTTGAT+GGG | + | chr1_3:28831200-28831219 | Msa0113130:intron | 30.0% | |
| AATAGTTACCATTCGAGTAT+TGG | + | chr1_3:28831947-28831966 | Msa0113130:intron | 30.0% | |
| TAAAATAGTTCAGCAGACTA+CGG | + | chr1_3:28832057-28832076 | Msa0113130:intron | 30.0% | |
| ! | AAGTTGACTCCAAAGTTTAT+TGG | + | chr1_3:28832238-28832257 | Msa0113130:intron | 30.0% |
| TGATAAGGACCAATAAACTT+TGG | - | chr1_3:28832250-28832269 | None:intergenic | 30.0% | |
| AGGACGAAATTCTATAAGTT+GGG | + | chr1_3:28832604-28832623 | Msa0113130:intron | 30.0% | |
| AAAGGAGAGGTTATGTTTAT+TGG | + | chr1_3:28832926-28832945 | Msa0113130:intron | 30.0% | |
| AAGGAGAGGTTATGTTTATT+GGG | + | chr1_3:28832927-28832946 | Msa0113130:intron | 30.0% | |
| GATTCATCTAAACTAAGGTA+AGG | + | chr1_3:28833072-28833091 | Msa0113130:intron | 30.0% | |
| TTGATGAATTGTTGTGTTCT+TGG | + | chr1_3:28833135-28833154 | Msa0113130:intron | 30.0% | |
| !! | ATTGTTGTGTTCTTGGTTTT+AGG | + | chr1_3:28833142-28833161 | Msa0113130:intron | 30.0% |
| !! | TCTAATTCATTTTGGGTGAT+TGG | + | chr1_3:28833273-28833292 | Msa0113130:intron | 30.0% |
| !! | CTAATTCATTTTGGGTGATT+GGG | + | chr1_3:28833274-28833293 | Msa0113130:intron | 30.0% |
| !! | TAATTCATTTTGGGTGATTG+GGG | + | chr1_3:28833275-28833294 | Msa0113130:intron | 30.0% |
| TGAAAAATCAGCTCAGAATT+CGG | - | chr1_3:28833391-28833410 | None:intergenic | 30.0% | |
| !! | CATAAGTTTTTGGACTAACT+TGG | - | chr1_3:28833675-28833694 | None:intergenic | 30.0% |
| CAAGTTAGTCCAAAAACTTA+TGG | + | chr1_3:28833673-28833692 | Msa0113130:intron | 30.0% | |
| TTAGTCCAAAAACTTATGGT+TGG | + | chr1_3:28833677-28833696 | Msa0113130:intron | 30.0% | |
| ! | CTAACACTTAAGTTTGAAGT+TGG | - | chr1_3:28833707-28833726 | None:intergenic | 30.0% |
| CAACTTCAAACTTAAGTGTT+AGG | + | chr1_3:28833705-28833724 | Msa0113130:intron | 30.0% | |
| !! | CAAAACTTAATTGCTTTTGG+GGG | + | chr1_3:28833775-28833794 | Msa0113130:intron | 30.0% |
| GTATCATCTAATGTCAAAGT+TGG | + | chr1_3:28833874-28833893 | Msa0113130:intron | 30.0% | |
| ATCATCTAATGTCAAAGTTG+GGG | + | chr1_3:28833876-28833895 | Msa0113130:intron | 30.0% | |
| ! | GAGTGTGTCATAATTGTTTT+AGG | + | chr1_3:28833898-28833917 | Msa0113130:intron | 30.0% |
| AATGTTTATCATTCACCTGT+TGG | + | chr1_3:28834020-28834039 | Msa0113130:intron | 30.0% | |
| ATGTTTATCATTCACCTGTT+GGG | + | chr1_3:28834021-28834040 | Msa0113130:intron | 30.0% | |
| !! | TTTAACCATCCAATTTGTTG+AGG | + | chr1_3:28834063-28834082 | Msa0113130:intron | 30.0% |
| !! | TTAACCATCCAATTTGTTGA+GGG | + | chr1_3:28834064-28834083 | Msa0113130:intron | 30.0% |
| AGAATCTTAATAAACTGCAG+CGG | - | chr1_3:28834690-28834709 | None:intergenic | 30.0% | |
| TAATCAGAGTAATCACACAA+CGG | - | chr1_3:28834777-28834796 | None:intergenic | 30.0% | |
| ! | TTGTATTAGAGGAGGATTTT+AGG | - | chr1_3:28835012-28835031 | None:intergenic | 30.0% |
| ! | GTTGTAGATTTTTCATATGC+AGG | + | chr1_3:28835215-28835234 | Msa0113130:intron | 30.0% |
| ATTTAGATAAACCTTAAGGG+AGG | + | chr1_3:28835395-28835414 | Msa0113130:intron | 30.0% | |
| ! | AGATTTTAAATTTGGCGCAT+CGG | + | chr1_3:28835468-28835487 | Msa0113130:intron | 30.0% |
| GGTAGATATGATTGTCTATT+TGG | - | chr1_3:28835618-28835637 | None:intergenic | 30.0% | |
| ATAGACAATCATATCTACCA+AGG | + | chr1_3:28835619-28835638 | Msa0113130:intron | 30.0% | |
| TGAACAAAAACTTAACATGG+AGG | - | chr1_3:28835788-28835807 | None:intergenic | 30.0% | |
| TAGAAGATCTAATCAGAATC+AGG | - | chr1_3:28835821-28835840 | None:intergenic | 30.0% | |
| !! | GTTGTTTCTAAAAAGCTCAA+TGG | + | chr1_3:28835871-28835890 | Msa0113130:intron | 30.0% |
| ATATTAAAAATGGGGCTGTT+TGG | + | chr1_3:28836178-28836197 | Msa0113130:intron | 30.0% | |
| ! | AATTTAGCATGATTAGGTTG+AGG | + | chr1_3:28836410-28836429 | Msa0113130:intron | 30.0% |
| ACAAACCTTAGATATTACCT+AGG | + | chr1_3:28836517-28836536 | Msa0113130:intron | 30.0% | |
| CAAACCTTAGATATTACCTA+GGG | + | chr1_3:28836518-28836537 | Msa0113130:intron | 30.0% | |
| GGTGTTAATTAGATGCTAAT+TGG | + | chr1_3:28836539-28836558 | Msa0113130:intron | 30.0% | |
| !!! | AGTTGTGATTTTTAGGTTTC+TGG | + | chr1_3:28836589-28836608 | Msa0113130:intron | 30.0% |
| !! | TAATTTTAGGAGTATGAAGG+AGG | + | chr1_3:28836826-28836845 | Msa0113130:intron | 30.0% |
| !! | AATTTTAGGAGTATGAAGGA+GGG | + | chr1_3:28836827-28836846 | Msa0113130:intron | 30.0% |
| TGTTACAGAAGTCTGTTTAT+AGG | + | chr1_3:28836870-28836889 | Msa0113130:intron | 30.0% | |
| CATCTTTAATGAGTATGCAA+TGG | - | chr1_3:28837153-28837172 | None:intergenic | 30.0% | |
| CATTGCATACTCATTAAAGA+TGG | + | chr1_3:28837151-28837170 | Msa0113130:intron | 30.0% | |
| TTGCATACTCATTAAAGATG+GGG | + | chr1_3:28837153-28837172 | Msa0113130:intron | 30.0% | |
| CAACATATATGAGCGTAATT+AGG | - | chr1_3:28837258-28837277 | None:intergenic | 30.0% | |
| TCTTGATATGAAAATGCATG+TGG | - | chr1_3:28837291-28837310 | None:intergenic | 30.0% | |
| GTTTGACATGATAAAAGTCT+TGG | - | chr1_3:28837795-28837814 | None:intergenic | 30.0% | |
| ! | TAAAATCTGAAACTACGAAG+CGG | - | chr1_3:28837823-28837842 | None:intergenic | 30.0% |
| ! | TTTTTATGTTGGGAAATACG+GGG | + | chr1_3:28837944-28837963 | Msa0113130:intron | 30.0% |
| AAGTTAGCATTATCAGGAAT+TGG | - | chr1_3:28838028-28838047 | None:intergenic | 30.0% | |
| ! | CTATTCAAGTTAGCATTATC+AGG | - | chr1_3:28838034-28838053 | None:intergenic | 30.0% |
| GATAATGCTAACTTGAATAG+AGG | + | chr1_3:28838034-28838053 | Msa0113130:intron | 30.0% | |
| !! | TAAAATGCATTCTTTTTGGG+AGG | + | chr1_3:28838222-28838241 | Msa0113130:intron | 30.0% |
| ! | TAGATATAGGTTGAAGGAAT+GGG | - | chr1_3:28838498-28838517 | None:intergenic | 30.0% |
| GATAGATTAGCACTAGATAT+AGG | - | chr1_3:28838511-28838530 | None:intergenic | 30.0% | |
| AGGTAGGAAAAGAAACAATT+GGG | - | chr1_3:28838638-28838657 | None:intergenic | 30.0% | |
| ! | AACTATTGATGGTACATAAG+AGG | - | chr1_3:28838798-28838817 | None:intergenic | 30.0% |
| ! | TAATTTTATTATGTCCCCAC+AGG | - | chr1_3:28838870-28838889 | None:intergenic | 30.0% |
| ! | GAAATAAGGTGTTACATAGT+TGG | - | chr1_3:28838929-28838948 | None:intergenic | 30.0% |
| ATAACTATCGTTGGGAAATA+AGG | - | chr1_3:28838943-28838962 | None:intergenic | 30.0% | |
| TAATAACAGAACTAAACGGA+GGG | + | chr1_3:28839244-28839263 | Msa0113130:intron | 30.0% | |
| !! | TTTTAGAAGGTGGAGATATA+GGG | - | chr1_3:28839273-28839292 | None:intergenic | 30.0% |
| TCAGAGTCATTCAACATAAA+CGG | + | chr1_3:28839369-28839388 | Msa0113130:intron | 30.0% | |
| TAAATCATAAGCAGTACCTA+AGG | + | chr1_3:28839570-28839589 | Msa0113130:intron | 30.0% | |
| ! | AAATTTTACGTTGGGAAAAC+GGG | - | chr1_3:28839679-28839698 | None:intergenic | 30.0% |
| ! | TATGTTGTTGAACGTTTTGA+AGG | - | chr1_3:28839785-28839804 | None:intergenic | 30.0% |
| CTTAAATAATCTTTGGCACA+AGG | + | chr1_3:28839839-28839858 | Msa0113130:intron | 30.0% | |
| GTTTGTACTTATGATGCTAT+AGG | - | chr1_3:28840264-28840283 | None:intergenic | 30.0% | |
| TTGAGCATAAATATACTCCT+AGG | + | chr1_3:28840775-28840794 | Msa0113130:intron | 30.0% | |
| TGAGCATAAATATACTCCTA+GGG | + | chr1_3:28840776-28840795 | Msa0113130:intron | 30.0% | |
| GCATACTCATTTATAGATGA+GGG | - | chr1_3:28840849-28840868 | None:intergenic | 30.0% | |
| TGCATACTCATTTATAGATG+AGG | - | chr1_3:28840850-28840869 | None:intergenic | 30.0% | |
| CATCTATAAATGAGTATGCA+TGG | + | chr1_3:28840850-28840869 | Msa0113130:intron | 30.0% | |
| ! | CATATTTTCATGTCAAACCA+AGG | + | chr1_3:28841160-28841179 | Msa0113130:intron | 30.0% |
| GTTATGATGAAAATACTCCA+AGG | - | chr1_3:28841319-28841338 | None:intergenic | 30.0% | |
| !!! | TAATTTTGTTAGCTTTCCAG+TGG | - | chr1_3:28841378-28841397 | None:intergenic | 30.0% |
| ! | TAGGTCACAGTGAATTTTTA+TGG | - | chr1_3:28841490-28841509 | None:intergenic | 30.0% |
| !!! | TCCTTTTGAAGTCAAAACAA+CGG | + | chr1_3:28841546-28841565 | Msa0113130:intron | 30.0% |
| !!! | CACACAATTCAGTTTTGAAT+TGG | - | chr1_3:28841622-28841641 | None:intergenic | 30.0% |
| GTGAAAAAGATGCAAAAACA+TGG | + | chr1_3:28841639-28841658 | Msa0113130:intron | 30.0% | |
| ! | GGATTCAAAATTGGGATTTT+GGG | - | chr1_3:28841717-28841736 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGATGAATTCA+TGG | - | chr1_3:28841973-28841992 | None:intergenic | 30.0% |
| !! | TTTTGAGAGATCGAGAATTA+GGG | - | chr1_3:28842086-28842105 | None:intergenic | 30.0% |
| !! | TTTTTGAGAGATCGAGAATT+AGG | - | chr1_3:28842087-28842106 | None:intergenic | 30.0% |
| GATTAGATTTAACGAGTTGT+AGG | - | chr1_3:28842115-28842134 | None:intergenic | 30.0% | |
| !! | CATCGATAATTCTAAGGTAA+GGG | - | chr1_3:28842178-28842197 | None:intergenic | 30.0% |
| !! | ATCAGTTTTTGGAGAAAACA+AGG | - | chr1_3:28842252-28842271 | None:intergenic | 30.0% |
| TGTAAGAGAAATTAGATGAG+GGG | - | chr1_3:28842319-28842338 | None:intergenic | 30.0% | |
| GTGTAAGAGAAATTAGATGA+GGG | - | chr1_3:28842320-28842339 | None:intergenic | 30.0% | |
| ! | TGAGGAAAAGAGTAATTTTG+AGG | - | chr1_3:28842342-28842361 | None:intergenic | 30.0% |
| ! | TATCATTTTACTCATGCATG+TGG | + | chr1_3:28843133-28843152 | Msa0113130:intron | 30.0% |
| TTGAGCATAAATATACTCCT+AGG | + | chr1_3:28840775-28840794 | Msa0113130:intron | 30.0% | |
| TGAGCATAAATATACTCCTA+GGG | + | chr1_3:28840776-28840795 | Msa0113130:intron | 30.0% | |
| ! | CTTTTGCTCAATAAAGATGA+GGG | - | chr1_3:28843258-28843277 | None:intergenic | 30.0% |
| GAGATGTTGATCCAAATTAT+TGG | - | chr1_3:28843368-28843387 | None:intergenic | 30.0% | |
| ATTGATTAAGCTGCATATGT+CGG | - | chr1_3:28843401-28843420 | None:intergenic | 30.0% | |
| ATGATGAAAATACTCCAATG+AGG | - | chr1_3:28843699-28843718 | None:intergenic | 30.0% | |
| !!! | TAATTTTGTTAGCTTTCCAG+TGG | - | chr1_3:28841378-28841397 | None:intergenic | 30.0% |
| TTCGATTTCAAAACGAAAAC+TGG | - | chr1_3:28843833-28843852 | None:intergenic | 30.0% | |
| ! | TAGGTCACAGTGAATTTTTA+TGG | - | chr1_3:28841490-28841509 | None:intergenic | 30.0% |
| !! | TCATTTTGATGTCAGACAAA+TGG | + | chr1_3:28843929-28843948 | Msa0113130:intron | 30.0% |
| ! | TAGGTCACAGTGAATTTTTA+TGG | - | chr1_3:28841490-28841509 | None:intergenic | 30.0% |
| !!! | TGTTAGTTTTCTAATGGCAT+TGG | - | chr1_3:28844141-28844160 | None:intergenic | 30.0% |
| !!! | CCGAATTTTGAAATGAAAAC+TGG | - | chr1_3:28844219-28844238 | None:intergenic | 30.0% |
| ! | AATCAATCTAAAGTAAGGGT+GGG | - | chr1_3:28844521-28844540 | None:intergenic | 30.0% |
| CTTTAGATTGATTGATTGCA+AGG | + | chr1_3:28844528-28844547 | Msa0113130:intron | 30.0% | |
| AAAATAAGGATTACGTGCAA+GGG | - | chr1_3:28844609-28844628 | None:intergenic | 30.0% | |
| AGAGTCAGAGTTAGAAAATA+AGG | - | chr1_3:28844623-28844642 | None:intergenic | 30.0% | |
| ! | TTTAGAATAATGAGGCTTTG+GGG | - | chr1_3:28844696-28844715 | None:intergenic | 30.0% |
| TCCTGCCATAACATAATAAT+AGG | + | chr1_3:28844992-28845011 | Msa0113130:intron | 30.0% | |
| CCTGCCATAACATAATAATA+GGG | + | chr1_3:28844993-28845012 | Msa0113130:intron | 30.0% | |
| !! | ATATGATGATGTTTTGTGCT+TGG | - | chr1_3:28845148-28845167 | None:intergenic | 30.0% |
| ! | GCAGCACAATAATGAAATTT+TGG | - | chr1_3:28845509-28845528 | None:intergenic | 30.0% |
| AAAAAACTTCACATTGCTTC+AGG | - | chr1_3:28845555-28845574 | None:intergenic | 30.0% | |
| ACTTCAATTAGTGTTAGTGT+AGG | + | chr1_3:28845721-28845740 | Msa0113130:intron | 30.0% | |
| ! | TGATCATCTATTGGGATTTT+AGG | + | chr1_3:28845756-28845775 | Msa0113130:intron | 30.0% |
| ! | CTTAATTTTGTTGAGCCTTT+TGG | + | chr1_3:28845896-28845915 | Msa0113130:intron | 30.0% |
| TAACACGTTATTGAACCAAA+AGG | - | chr1_3:28845914-28845933 | None:intergenic | 30.0% | |
| !!! | CCTTAAATGGTTTTGGATTA+AGG | - | chr1_3:28846020-28846039 | None:intergenic | 30.0% |
| CCTTAATCCAAAACCATTTA+AGG | + | chr1_3:28846017-28846036 | Msa0113130:CDS | 30.0% | |
| AAGCATAAGGTAAGAACTAA+TGG | - | chr1_3:28846063-28846082 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTGAACCTTAACA+GGG | + | chr1_3:28846100-28846119 | Msa0113130:intron | 30.0% |
| TGAATTATTCTCAATCTGTG+TGG | + | chr1_3:28846142-28846161 | Msa0113130:intron | 30.0% | |
| ATGCGTATCAAAACCATATA+CGG | - | chr1_3:28846285-28846304 | None:intergenic | 30.0% | |
| GATACGCATATGTTAGTTAT+TGG | + | chr1_3:28846296-28846315 | Msa0113130:intron | 30.0% | |
| GAATTCAGGTAAATATAGCA+GGG | - | chr1_3:28846327-28846346 | None:intergenic | 30.0% | |
| AGAATTCAGGTAAATATAGC+AGG | - | chr1_3:28846328-28846347 | None:intergenic | 30.0% | |
| TTGTGCAATTGTTAGAATTC+AGG | - | chr1_3:28846341-28846360 | None:intergenic | 30.0% | |
| ACAGCCATATATGAAAACTT+TGG | - | chr1_3:28846421-28846440 | None:intergenic | 30.0% | |
| GAAATTCAAAGTCTCAATGT+TGG | - | chr1_3:28846576-28846595 | None:intergenic | 30.0% | |
| !! | ATAGTTGAACTTTGAAGTAG+TGG | + | chr1_3:28846641-28846660 | Msa0113130:intron | 30.0% |
| ACTCAACATTAAGCTAACTA+TGG | - | chr1_3:28846769-28846788 | None:intergenic | 30.0% | |
| ! | TGACTCAATTTTACCAACAT+GGG | - | chr1_3:28847305-28847324 | None:intergenic | 30.0% |
| ! | ATGACTCAATTTTACCAACA+TGG | - | chr1_3:28847306-28847325 | None:intergenic | 30.0% |
| ATAAGGTTGAAAGAAAAACG+AGG | - | chr1_3:28847515-28847534 | None:intergenic | 30.0% | |
| ATGAATACCTTGAAGATGAT+TGG | + | chr1_3:28847608-28847627 | Msa0113130:CDS | 30.0% | |
| TGTTTAAATGGAAATGGAAC+TGG | - | chr1_3:28847686-28847705 | None:intergenic | 30.0% | |
| ! | AAGGTATCTGAACTTTATCT+TGG | + | chr1_3:28847744-28847763 | Msa0113130:intron | 30.0% |
| GCTTATAAAGGATAATGACA+AGG | + | chr1_3:28847968-28847987 | Msa0113130:CDS | 30.0% | |
| ! | GTAACAATTTTCTTTGGATG+TGG | + | chr1_3:28848030-28848049 | Msa0113130:intron | 30.0% |
| ! | TGAAGTAAGAGTCACTTTAT+AGG | + | chr1_3:28848059-28848078 | Msa0113130:intron | 30.0% |
| GCATACGTATATTAAGATAG+GGG | - | chr1_3:28848144-28848163 | None:intergenic | 30.0% | |
| GGCATACGTATATTAAGATA+GGG | - | chr1_3:28848145-28848164 | None:intergenic | 30.0% | |
| TGGCATACGTATATTAAGAT+AGG | - | chr1_3:28848146-28848165 | None:intergenic | 30.0% | |
| TATGCATCAAGATACTACTA+TGG | - | chr1_3:28848166-28848185 | None:intergenic | 30.0% | |
| ! | TAATGTTCTGATGGATATAG+TGG | + | chr1_3:28848264-28848283 | Msa0113130:intron | 30.0% |
| GGATGTATAGATTAATGCTA+AGG | - | chr1_3:28848490-28848509 | None:intergenic | 30.0% | |
| !! | TTTTGGCTAATGTTCATCAT+TGG | + | chr1_3:28848908-28848927 | Msa0113130:intron | 30.0% |
| ! | TTTGGCTTAAATTACCATCC+GGG | + | chr1_3:28830978-28830997 | Msa0113130:intron | 35.0% |
| GGTGAAAGAATTTGAATTGC+TGG | + | chr1_3:28831061-28831080 | Msa0113130:intron | 35.0% | |
| AAATTTCACATCAACCTCCT+GGG | - | chr1_3:28831189-28831208 | None:intergenic | 35.0% | |
| !!! | GATTTTCAGGTTGATGATCA+AGG | + | chr1_3:28831248-28831267 | Msa0113130:intron | 35.0% |
| AAAACAGTTTCTTCAAGTCG+TGG | - | chr1_3:28831391-28831410 | None:intergenic | 35.0% | |
| ! | ACGACTTGAAGAAACTGTTT+TGG | + | chr1_3:28831390-28831409 | Msa0113130:intron | 35.0% |
| !! | ACTTGAAGAAACTGTTTTGG+TGG | + | chr1_3:28831393-28831412 | Msa0113130:intron | 35.0% |
| ATGCTATCTCATTTCCATTC+CGG | - | chr1_3:28831527-28831546 | None:intergenic | 35.0% | |
| ACTTTACCAAACACTCAAAG+AGG | + | chr1_3:28831566-28831585 | Msa0113130:intron | 35.0% | |
| CTTTACCAAACACTCAAAGA+GGG | + | chr1_3:28831567-28831586 | Msa0113130:intron | 35.0% | |
| CATAATATTGCGAAGTTGCA+TGG | + | chr1_3:28831692-28831711 | Msa0113130:intron | 35.0% | |
| TTGTACGTGAACTCTATCAA+TGG | - | chr1_3:28831926-28831945 | None:intergenic | 35.0% | |
| !! | TTACCATTCGAGTATTGGTA+TGG | + | chr1_3:28831952-28831971 | Msa0113130:intron | 35.0% |
| !! | TCCTTTATGTTGGTTTGAGT+CGG | + | chr1_3:28832012-28832031 | Msa0113130:intron | 35.0% |
| ! | GTAGTCTGCTGAACTATTTT+AGG | - | chr1_3:28832058-28832077 | None:intergenic | 35.0% |
| AGAGTTATCATGACAAACGT+AGG | + | chr1_3:28832131-28832150 | Msa0113130:intron | 35.0% | |
| !! | AAACTTTGGAGTCAACTTCT+TGG | - | chr1_3:28832236-28832255 | None:intergenic | 35.0% |
| AATATCTGAGAGAATTGGCA+CGG | + | chr1_3:28832270-28832289 | Msa0113130:intron | 35.0% | |
| TCATGCAAGTTTGAAAGATG+TGG | - | chr1_3:28832319-28832338 | None:intergenic | 35.0% | |
| ! | CTCTAGGAATAACATGTGAA+GGG | - | chr1_3:28832381-28832400 | None:intergenic | 35.0% |
| ! | TCTCTAGGAATAACATGTGA+AGG | - | chr1_3:28832382-28832401 | None:intergenic | 35.0% |
| TAGAGATGATGTGCAAGTTA+GGG | + | chr1_3:28832396-28832415 | Msa0113130:intron | 35.0% | |
| TTACGATCATCAATCCTCAA+AGG | - | chr1_3:28832445-28832464 | None:intergenic | 35.0% | |
| ! | TTTGAGGATTGATGATCGTA+AGG | + | chr1_3:28832444-28832463 | Msa0113130:intron | 35.0% |
| CAAAGATATACCTCTAGTGA+GGG | + | chr1_3:28832483-28832502 | Msa0113130:intron | 35.0% | |
| AACTGGTGAAAGTCTTACTT+GGG | + | chr1_3:28832522-28832541 | Msa0113130:intron | 35.0% | |
| TTGCTTGAGGTAATATTTCG+AGG | + | chr1_3:28832584-28832603 | Msa0113130:intron | 35.0% | |
| GAGGACGAAATTCTATAAGT+TGG | + | chr1_3:28832603-28832622 | Msa0113130:intron | 35.0% | |
| GGACGAAATTCTATAAGTTG+GGG | + | chr1_3:28832605-28832624 | Msa0113130:intron | 35.0% | |
| TGGGAAATAGAATAGAGAGA+AGG | + | chr1_3:28832946-28832965 | Msa0113130:intron | 35.0% | |
| !! | ATAAGCTTTTGGGAGAAGAA+GGG | + | chr1_3:28832999-28833018 | Msa0113130:intron | 35.0% |
| ! | GTTTGATGCATGTTTCTATG+TGG | + | chr1_3:28833210-28833229 | Msa0113130:intron | 35.0% |
| !! | TGCATGTTTCTATGTGGTTT+TGG | + | chr1_3:28833216-28833235 | Msa0113130:intron | 35.0% |
| !! | AATTCATTTTGGGTGATTGG+GGG | + | chr1_3:28833276-28833295 | Msa0113130:intron | 35.0% |
| TGATTGGGGGATCAAAAATT+GGG | + | chr1_3:28833289-28833308 | Msa0113130:intron | 35.0% | |
| ! | GGGATCAAAAATTGGGATTT+TGG | + | chr1_3:28833296-28833315 | Msa0113130:intron | 35.0% |
| ! | TTTTGGACATTCACAGCTTA+CGG | - | chr1_3:28833340-28833359 | None:intergenic | 35.0% |
| AAGCTGTGAATGTCCAAAAT+CGG | + | chr1_3:28833341-28833360 | Msa0113130:intron | 35.0% | |
| AAAAATCAGCTCAGAATTCG+GGG | - | chr1_3:28833389-28833408 | None:intergenic | 35.0% | |
| GAAAAATCAGCTCAGAATTC+GGG | - | chr1_3:28833390-28833409 | None:intergenic | 35.0% | |
| ! | AGCTTTGGTTCGACAAAAAT+CGG | + | chr1_3:28833410-28833429 | Msa0113130:intron | 35.0% |
| ! | AAGTGAGTGTTTTCCAGTTT+TGG | - | chr1_3:28833475-28833494 | None:intergenic | 35.0% |
| ! | AATTTTGCTAAAGACCCACT+TGG | - | chr1_3:28833628-28833647 | None:intergenic | 35.0% |
| ! | GGAAACCAACCATAAGTTTT+TGG | - | chr1_3:28833685-28833704 | None:intergenic | 35.0% |
| !! | GCTTTAGTTGAGGTGTTTTA+TGG | + | chr1_3:28833728-28833747 | Msa0113130:intron | 35.0% |
| TGATACAACAACGTCAACAA+CGG | - | chr1_3:28833860-28833879 | None:intergenic | 35.0% | |
| AACAGATGTGAGTATGCAAA+TGG | - | chr1_3:28833983-28834002 | None:intergenic | 35.0% | |
| ATTTGCATACTCACATCTGT+TGG | + | chr1_3:28833982-28834001 | Msa0113130:intron | 35.0% | |
| TTTGCATACTCACATCTGTT+GGG | + | chr1_3:28833983-28834002 | Msa0113130:intron | 35.0% | |
| GGTGAATGATAAACATTCCA+GGG | - | chr1_3:28834017-28834036 | None:intergenic | 35.0% | |
| AGGTGAATGATAAACATTCC+AGG | - | chr1_3:28834018-28834037 | None:intergenic | 35.0% | |
| TGTTTATCATTCACCTGTTG+GGG | + | chr1_3:28834022-28834041 | Msa0113130:intron | 35.0% | |
| GTTGAATGCTAAACATTCCA+GGG | - | chr1_3:28834096-28834115 | None:intergenic | 35.0% | |
| ACAACAAAGCATATCACAAC+AGG | - | chr1_3:28834339-28834358 | None:intergenic | 35.0% | |
| CAATGAAAATCTTGGCACAA+AGG | - | chr1_3:28834626-28834645 | None:intergenic | 35.0% | |
| ATATTACGTTGTTGGGAGAA+CGG | + | chr1_3:28834806-28834825 | Msa0113130:intron | 35.0% | |
| ! | CTTTGAAAGGATGAGATTAG+AGG | + | chr1_3:28834852-28834871 | Msa0113130:intron | 35.0% |
| !! | AGGAGGATTTTAGGAAGTTT+GGG | - | chr1_3:28835003-28835022 | None:intergenic | 35.0% |
| ACACTTCCAGACTACAAAAA+CGG | - | chr1_3:28835088-28835107 | None:intergenic | 35.0% | |
| ACACTTCCAAACGACAAAAA+CGG | - | chr1_3:28835120-28835139 | None:intergenic | 35.0% | |
| TAGCTAATGTGTGGAACATA+AGG | - | chr1_3:28835147-28835166 | None:intergenic | 35.0% | |
| ! | GTAGATTTTTCATATGCAGG+AGG | + | chr1_3:28835218-28835237 | Msa0113130:intron | 35.0% |
| AAGTTAACGGAGATAAACTG+TGG | + | chr1_3:28835328-28835347 | Msa0113130:intron | 35.0% | |
| AGTTAACGGAGATAAACTGT+GGG | + | chr1_3:28835329-28835348 | Msa0113130:intron | 35.0% | |
| ! | TGTGATGAGTTTGAAACTAG+AGG | + | chr1_3:28835359-28835378 | Msa0113130:intron | 35.0% |
| ! | GTGATGAGTTTGAAACTAGA+GGG | + | chr1_3:28835360-28835379 | Msa0113130:intron | 35.0% |
| ! | TGATGAGTTTGAAACTAGAG+GGG | + | chr1_3:28835361-28835380 | Msa0113130:intron | 35.0% |
| AAATACACTAACCTCCCTTA+AGG | - | chr1_3:28835409-28835428 | None:intergenic | 35.0% | |
| !! | TTTGGTTCGAGATTTTTGGA+GGG | - | chr1_3:28835527-28835546 | None:intergenic | 35.0% |
| !! | TTCGTTTGGTTCGAGATTTT+TGG | - | chr1_3:28835531-28835550 | None:intergenic | 35.0% |
| GATTTCTACACGAATTCATC+TGG | + | chr1_3:28835725-28835744 | Msa0113130:intron | 35.0% | |
| TAGAGGTGAGTAGAGTAATA+AGG | + | chr1_3:28836216-28836235 | Msa0113130:intron | 35.0% | |
| ! | ACGTTTTTACGTAACGCTTT+TGG | + | chr1_3:28836269-28836288 | Msa0113130:intron | 35.0% |
| AACACCCTAGGTAATATCTA+AGG | - | chr1_3:28836525-28836544 | None:intergenic | 35.0% | |
| TAGCATCTAATTAACACCCT+AGG | - | chr1_3:28836537-28836556 | None:intergenic | 35.0% | |
| AATTGGATGAAAGAACCATG+AGG | + | chr1_3:28836556-28836575 | Msa0113130:intron | 35.0% | |
| ! | CAACTTTTCATCTAACCTCA+TGG | - | chr1_3:28836574-28836593 | None:intergenic | 35.0% |
| TGCATACTCATTAAAGATGG+GGG | + | chr1_3:28837154-28837173 | Msa0113130:intron | 35.0% | |
| CTTTATGCTCAAACTACGTT+GGG | + | chr1_3:28837192-28837211 | Msa0113130:intron | 35.0% | |
| TTTATGCTCAAACTACGTTG+GGG | + | chr1_3:28837193-28837212 | Msa0113130:intron | 35.0% | |
| CGCTCATATATGTTGTTGAA+TGG | + | chr1_3:28837263-28837282 | Msa0113130:intron | 35.0% | |
| CTTAACAACTTAAACCATCG+TGG | - | chr1_3:28837318-28837337 | None:intergenic | 35.0% | |
| AACAAACTCGTCTTCATCAA+TGG | + | chr1_3:28837995-28838014 | Msa0113130:intron | 35.0% | |
| AGCATTATCAGGAATTGGAA+CGG | - | chr1_3:28838023-28838042 | None:intergenic | 35.0% | |
| GGATGTGGACAAAAACAATT+GGG | - | chr1_3:28838271-28838290 | None:intergenic | 35.0% | |
| CAATTGTAGAACTAGAGATC+AGG | + | chr1_3:28838321-28838340 | Msa0113130:intron | 35.0% | |
| TCAGGTTATGCAATTTGTAC+TGG | + | chr1_3:28838339-28838358 | Msa0113130:intron | 35.0% | |
| AGTAAGTTGTAGCAGAATGA+TGG | - | chr1_3:28838383-28838402 | None:intergenic | 35.0% | |
| GACTCACAATTATGCTTACA+AGG | + | chr1_3:28838403-28838422 | Msa0113130:intron | 35.0% | |
| GTATTGGGGCTTAAAAAGTT+AGG | - | chr1_3:28838461-28838480 | None:intergenic | 35.0% | |
| ! | GGGGAATGAATTTTGTATTG+GGG | - | chr1_3:28838475-28838494 | None:intergenic | 35.0% |
| ! | GGGGGAATGAATTTTGTATT+GGG | - | chr1_3:28838476-28838495 | None:intergenic | 35.0% |
| ! | AGATATAGGTTGAAGGAATG+GGG | - | chr1_3:28838497-28838516 | None:intergenic | 35.0% |
| ! | CTAGATATAGGTTGAAGGAA+TGG | - | chr1_3:28838499-28838518 | None:intergenic | 35.0% |
| ! | TAGCACTAGATATAGGTTGA+AGG | - | chr1_3:28838504-28838523 | None:intergenic | 35.0% |
| CTCAAACTTCTCTGTTGAAA+TGG | + | chr1_3:28838573-28838592 | Msa0113130:intron | 35.0% | |
| ATTCCACATAGATGTTTCAC+CGG | - | chr1_3:28838604-28838623 | None:intergenic | 35.0% | |
| GTAGGAAAAGAAACAATTGG+GGG | - | chr1_3:28838636-28838655 | None:intergenic | 35.0% | |
| GGTAGGAAAAGAAACAATTG+GGG | - | chr1_3:28838637-28838656 | None:intergenic | 35.0% | |
| CAGGTAGGAAAAGAAACAAT+TGG | - | chr1_3:28838639-28838658 | None:intergenic | 35.0% | |
| TACATAAGAGGATGGATAGA+GGG | - | chr1_3:28838786-28838805 | None:intergenic | 35.0% | |
| ! | ATTGATGGTACATAAGAGGA+TGG | - | chr1_3:28838794-28838813 | None:intergenic | 35.0% |
| ! | CGAAGCCTGATTTTGTTAAT+AGG | - | chr1_3:28838826-28838845 | None:intergenic | 35.0% |
| ATTATATAACCTAGGTCGGA+TGG | + | chr1_3:28838886-28838905 | Msa0113130:intron | 35.0% | |
| ! | TACATAGTTGGTATTAGTGC+AGG | - | chr1_3:28838917-28838936 | None:intergenic | 35.0% |
| ATAATTGTCTTCTTCTCCAG+TGG | - | chr1_3:28839058-28839077 | None:intergenic | 35.0% | |
| !! | TTGCAGTTTGAGTTGATTCT+TGG | - | chr1_3:28839147-28839166 | None:intergenic | 35.0% |
| TTATATGGTAACACTAGGGT+CGG | - | chr1_3:28839191-28839210 | None:intergenic | 35.0% | |
| GCTCTTATATGGTAACACTA+GGG | - | chr1_3:28839195-28839214 | None:intergenic | 35.0% | |
| AGCTCTTATATGGTAACACT+AGG | - | chr1_3:28839196-28839215 | None:intergenic | 35.0% | |
| CTAATAACAGAACTAAACGG+AGG | + | chr1_3:28839243-28839262 | Msa0113130:intron | 35.0% | |
| !!! | GTTTTAGAAGGTGGAGATAT+AGG | - | chr1_3:28839274-28839293 | None:intergenic | 35.0% |
| TACAGATACTCAGGTTAACA+AGG | - | chr1_3:28839311-28839330 | None:intergenic | 35.0% | |
| !! | GTGGCTATTTTCTATTCCTT+AGG | - | chr1_3:28839589-28839608 | None:intergenic | 35.0% |
| ! | AATTTTACGTTGGGAAAACG+GGG | - | chr1_3:28839678-28839697 | None:intergenic | 35.0% |
| GAAAATGTTGCTCTTCGTAT+GGG | - | chr1_3:28840049-28840068 | None:intergenic | 35.0% | |
| TGAAAATGTTGCTCTTCGTA+TGG | - | chr1_3:28840050-28840069 | None:intergenic | 35.0% | |
| !! | AGCAACATTTTCAAGCAGAA+GGG | + | chr1_3:28840057-28840076 | Msa0113130:intron | 35.0% |
| CACAACTTAACATCTTGACT+CGG | + | chr1_3:28840643-28840662 | Msa0113130:intron | 35.0% | |
| TCATGAAATGCAAATGCATG+TGG | + | chr1_3:28840721-28840740 | Msa0113130:intron | 35.0% | |
| ATGATGAAAATACTCCAAGG+AGG | - | chr1_3:28841316-28841335 | None:intergenic | 35.0% | |
| ATGGTCAAATTAATGCACGT+AGG | - | chr1_3:28841509-28841528 | None:intergenic | 35.0% | |
| !!! | TCCGTTGTTTTGACTTCAAA+AGG | - | chr1_3:28841550-28841569 | None:intergenic | 35.0% |
| AAACACGAAAGTTGTAGGTA+TGG | - | chr1_3:28841589-28841608 | None:intergenic | 35.0% | |
| ! | GGGATTCAAAATTGGGATTT+TGG | - | chr1_3:28841718-28841737 | None:intergenic | 35.0% |
| GGTTTAGGGGATTCAAAATT+GGG | - | chr1_3:28841725-28841744 | None:intergenic | 35.0% | |
| !! | CAAACTTTGGGACCAAATTT+GGG | - | chr1_3:28841746-28841765 | None:intergenic | 35.0% |
| !! | ACAAACTTTGGGACCAAATT+TGG | - | chr1_3:28841747-28841766 | None:intergenic | 35.0% |
| !! | CCATCGATAATTCTAAGGTA+AGG | - | chr1_3:28842179-28842198 | None:intergenic | 35.0% |
| CCTTACCTTAGAATTATCGA+TGG | + | chr1_3:28842176-28842195 | Msa0113130:intron | 35.0% | |
| ! | TAGAACGTACGATCAGTTTT+TGG | - | chr1_3:28842263-28842282 | None:intergenic | 35.0% |
| GGTGTAAGAGAAATTAGATG+AGG | - | chr1_3:28842321-28842340 | None:intergenic | 35.0% | |
| ! | TCTTCGTATGAGTAATTTGC+AGG | - | chr1_3:28842907-28842926 | None:intergenic | 35.0% |
| ! | GCTTTTGCTCAATAAAGATG+AGG | - | chr1_3:28843259-28843278 | None:intergenic | 35.0% |
| TTTATTGAGCAAAAGCTCCT+AGG | + | chr1_3:28843263-28843282 | Msa0113130:intron | 35.0% | |
| TTATTGAGCAAAAGCTCCTA+GGG | + | chr1_3:28843264-28843283 | Msa0113130:intron | 35.0% | |
| GCATACTCATTTAAAGACGA+GGG | - | chr1_3:28843296-28843315 | None:intergenic | 35.0% | |
| TGCATACTCATTTAAAGACG+AGG | - | chr1_3:28843297-28843316 | None:intergenic | 35.0% | |
| CGTCTTTAAATGAGTATGCA+TGG | + | chr1_3:28843297-28843316 | Msa0113130:intron | 35.0% | |
| !! | AAACGAAAACTGGTATTGAC+CGG | - | chr1_3:28843823-28843842 | None:intergenic | 35.0% |
| !! | AGTATTGATCGGTACAGAAT+TGG | - | chr1_3:28844005-28844024 | None:intergenic | 35.0% |
| ATGATCAAATTACTGCACGT+AGG | - | chr1_3:28844085-28844104 | None:intergenic | 35.0% | |
| AAACACGAAAGTTGTAGGTA+TGG | - | chr1_3:28841589-28841608 | None:intergenic | 35.0% | |
| GGACAGAGATAAGAAAAATC+AGG | + | chr1_3:28844238-28844257 | Msa0113130:intron | 35.0% | |
| ! | CAATCAATCTAAAGTAAGGG+TGG | - | chr1_3:28844522-28844541 | None:intergenic | 35.0% |
| TTCTACAAACTTCTCTTCTC+TGG | + | chr1_3:28844552-28844571 | Msa0113130:intron | 35.0% | |
| GAAAATAAGGATTACGTGCA+AGG | - | chr1_3:28844610-28844629 | None:intergenic | 35.0% | |
| CGTTACAGTATCTGTATTCA+AGG | + | chr1_3:28844922-28844941 | Msa0113130:intron | 35.0% | |
| CCCTATTATTATGTTATGGC+AGG | - | chr1_3:28844996-28845015 | None:intergenic | 35.0% | |
| AACTGTTGAGAGTGAAGATA+TGG | - | chr1_3:28845063-28845082 | None:intergenic | 35.0% | |
| GAGGAAAGTGAAAACTGAAA+GGG | - | chr1_3:28845386-28845405 | None:intergenic | 35.0% | |
| AGAGGAAAGTGAAAACTGAA+AGG | - | chr1_3:28845387-28845406 | None:intergenic | 35.0% | |
| AACATCTAATTCCAATCTGC+AGG | - | chr1_3:28845442-28845461 | None:intergenic | 35.0% | |
| TGCGAAAACAAATTGTTGCT+GGG | + | chr1_3:28845526-28845545 | Msa0113130:intron | 35.0% | |
| ! | GAATTGCAACTCTTTGCTTT+TGG | - | chr1_3:28845607-28845626 | None:intergenic | 35.0% |
| TGAAGCTGATGATCATCTAT+TGG | + | chr1_3:28845747-28845766 | Msa0113130:intron | 35.0% | |
| GAAGCTGATGATCATCTATT+GGG | + | chr1_3:28845748-28845767 | Msa0113130:intron | 35.0% | |
| AAGAGAATTACAGAACAAGC+TGG | + | chr1_3:28845982-28846001 | Msa0113130:CDS | 35.0% | |
| !!! | GTTTTGGTTTGAACCTTAAC+AGG | + | chr1_3:28846099-28846118 | Msa0113130:intron | 35.0% |
| ! | CGGTCCAAAGTTTTCATATA+TGG | + | chr1_3:28846414-28846433 | Msa0113130:intron | 35.0% |
| !! | AAATTGGAAAATGATGACGG+TGG | - | chr1_3:28846493-28846512 | None:intergenic | 35.0% |
| ! | GACTTTTGATACATAAGCAG+GGG | - | chr1_3:28846554-28846573 | None:intergenic | 35.0% |
| ! | GGACTTTTGATACATAAGCA+GGG | - | chr1_3:28846555-28846574 | None:intergenic | 35.0% |
| ! | TGGACTTTTGATACATAAGC+AGG | - | chr1_3:28846556-28846575 | None:intergenic | 35.0% |
| ! | GAAGTAGTGGTTTTCTGATT+TGG | + | chr1_3:28846654-28846673 | Msa0113130:intron | 35.0% |
| CTGTTTCAAGCTTCATTGAA+AGG | - | chr1_3:28846956-28846975 | None:intergenic | 35.0% | |
| AGACGAGTGTATATTCAATC+TGG | - | chr1_3:28846985-28847004 | None:intergenic | 35.0% | |
| ! | GACTCACATGATCTTTTGAA+GGG | - | chr1_3:28847019-28847038 | None:intergenic | 35.0% |
| ! | AGACTCACATGATCTTTTGA+AGG | - | chr1_3:28847020-28847039 | None:intergenic | 35.0% |
| !! | GCAGATTTGTTGACTCAAAT+AGG | + | chr1_3:28847060-28847079 | Msa0113130:intron | 35.0% |
| ! | GACTCAATTTTACCAACATG+GGG | - | chr1_3:28847304-28847323 | None:intergenic | 35.0% |
| TGAAAGAAAAACGAGGAACA+TGG | - | chr1_3:28847508-28847527 | None:intergenic | 35.0% | |
| TAAGCTGAGTGACTGAAATA+AGG | - | chr1_3:28847532-28847551 | None:intergenic | 35.0% | |
| ! | AATGGAACTGGATTAGAATG+AGG | - | chr1_3:28847674-28847693 | None:intergenic | 35.0% |
| AGTCACAAGCTAATAGTACA+TGG | - | chr1_3:28847772-28847791 | None:intergenic | 35.0% | |
| ATGATCTCATCTATCTTCTC+TGG | - | chr1_3:28847921-28847940 | None:intergenic | 35.0% | |
| TTTGCCATCAAGTTTGATTC+AGG | + | chr1_3:28848548-28848567 | Msa0113130:intron | 35.0% | |
| !! | TACATCAGGTTGATCTTCTT+AGG | + | chr1_3:28848602-28848621 | Msa0113130:intron | 35.0% |
| ! | TAGGAGTTACTTTATGTTGC+TGG | + | chr1_3:28848679-28848698 | Msa0113130:intron | 35.0% |
| !! | AAGAGTATGGTTGGTTTATC+AGG | - | chr1_3:28848934-28848953 | None:intergenic | 35.0% |
| AAACCAACCATACTCTTTAC+AGG | + | chr1_3:28848937-28848956 | Msa0113130:intron | 35.0% | |
| GATTCATTATATCCACAGCT+TGG | - | chr1_3:28849006-28849025 | None:intergenic | 35.0% | |
| ! | AAGATCTTGCTGGTAACGTT+GGG | - | chr1_3:28830605-28830624 | None:intergenic | 40.0% |
| AGTTGAATATGAGGCAGAGA+AGG | + | chr1_3:28830928-28830947 | Msa0113130:intron | 40.0% | |
| TAGGAAAACGTTGCACATGT+CGG | + | chr1_3:28831031-28831050 | Msa0113130:intron | 40.0% | |
| CAAATTTCACATCAACCTCC+TGG | - | chr1_3:28831190-28831209 | None:intergenic | 40.0% | |
| ATGGGTGCTAGTAATCAGAA+TGG | + | chr1_3:28831218-28831237 | Msa0113130:intron | 40.0% | |
| GCTAGTAATCAGAATGGAGA+TGG | + | chr1_3:28831224-28831243 | Msa0113130:intron | 40.0% | |
| ! | GAATGGAGATGGTGATTTTC+AGG | + | chr1_3:28831235-28831254 | Msa0113130:intron | 40.0% |
| CAGGAATACAAATCCTACCT+CGG | - | chr1_3:28831286-28831305 | None:intergenic | 40.0% | |
| AAGCAACTTGAGTATCCATC+CGG | + | chr1_3:28831349-28831368 | Msa0113130:intron | 40.0% | |
| !!! | AAGAAACTGTTTTGGTGGTC+TGG | + | chr1_3:28831398-28831417 | Msa0113130:intron | 40.0% |
| !!! | AGAAACTGTTTTGGTGGTCT+GGG | + | chr1_3:28831399-28831418 | Msa0113130:intron | 40.0% |
| GAAATGAGATAGCATCTCCA+TGG | + | chr1_3:28831532-28831551 | Msa0113130:intron | 40.0% | |
| TAAAGTCGTCACAAAGTCCA+TGG | - | chr1_3:28831552-28831571 | None:intergenic | 40.0% | |
| TCTATCGACAACAACCCAAA+TGG | - | chr1_3:28831600-28831619 | None:intergenic | 40.0% | |
| TGTCGATAGATTGACGAAGT+CGG | + | chr1_3:28831610-28831629 | Msa0113130:intron | 40.0% | |
| CACTTATTCAGTAGCTCAGT+TGG | + | chr1_3:28831655-28831674 | Msa0113130:intron | 40.0% | |
| TTATTCAGTAGCTCAGTTGG+CGG | + | chr1_3:28831658-28831677 | Msa0113130:intron | 40.0% | |
| CAAAATCTCGAAGTGAACCT+CGG | - | chr1_3:28831749-28831768 | None:intergenic | 40.0% | |
| AAGAGCTTGCAAGAAGCTTT+GGG | + | chr1_3:28831770-28831789 | Msa0113130:intron | 40.0% | |
| ACGTGAACTCTATCAATGGT+AGG | - | chr1_3:28831922-28831941 | None:intergenic | 40.0% | |
| ! | GCACCTTTCGAAGCTTTATA+TGG | + | chr1_3:28831974-28831993 | Msa0113130:intron | 40.0% |
| CGACCATATAAAGCTTCGAA+AGG | - | chr1_3:28831980-28831999 | None:intergenic | 40.0% | |
| ! | TCGAAGCTTTATATGGTCGA+AGG | + | chr1_3:28831981-28832000 | Msa0113130:intron | 40.0% |
| GGTGTAGAACTCCTTTATGT+TGG | + | chr1_3:28832002-28832021 | Msa0113130:intron | 40.0% | |
| !! | CCTTTATGTTGGTTTGAGTC+GGG | + | chr1_3:28832013-28832032 | Msa0113130:intron | 40.0% |
| !! | TCGGGTGAAAGTATTGTGTT+GGG | + | chr1_3:28832031-28832050 | Msa0113130:intron | 40.0% |
| AAAGACCTCGAGTTTCAAGA+GGG | + | chr1_3:28832154-28832173 | Msa0113130:intron | 40.0% | |
| TGCAAGTTTGAAAGATGTGG+TGG | - | chr1_3:28832316-28832335 | None:intergenic | 40.0% | |
| TGTTTCATGTGTCGCAACTT+CGG | + | chr1_3:28832341-28832360 | Msa0113130:intron | 40.0% | |
| ! | CTAACTTGCACATCATCTCT+AGG | - | chr1_3:28832397-28832416 | None:intergenic | 40.0% |
| CTAGAGATGATGTGCAAGTT+AGG | + | chr1_3:28832395-28832414 | Msa0113130:intron | 40.0% | |
| GCAAGTTAGGGACAATCTTA+CGG | + | chr1_3:28832408-28832427 | Msa0113130:intron | 40.0% | |
| GCAAAGATATACCTCTAGTG+AGG | + | chr1_3:28832482-28832501 | Msa0113130:intron | 40.0% | |
| CAACTGGTGAAAGTCTTACT+TGG | + | chr1_3:28832521-28832540 | Msa0113130:intron | 40.0% | |
| TGAAAGTCTTACTTGGGAGT+TGG | + | chr1_3:28832528-28832547 | Msa0113130:intron | 40.0% | |
| TATCCTGAGTTGTTTGCTTG+AGG | + | chr1_3:28832571-28832590 | Msa0113130:intron | 40.0% | |
| TTACCTCAAGCAAACAACTC+AGG | - | chr1_3:28832577-28832596 | None:intergenic | 40.0% | |
| !! | CATAAGCTTTTGGGAGAAGA+AGG | + | chr1_3:28832998-28833017 | Msa0113130:intron | 40.0% |
| AAGAAGGGAAAACCTAGAAG+AGG | + | chr1_3:28833014-28833033 | Msa0113130:intron | 40.0% | |
| GTGATTGGGGGATCAAAAAT+TGG | + | chr1_3:28833288-28833307 | Msa0113130:intron | 40.0% | |
| !!! | TGGGATTTTGGAGTGAAAAC+TGG | + | chr1_3:28833308-28833327 | Msa0113130:intron | 40.0% |
| TTTGGACATTCACAGCTTAC+GGG | - | chr1_3:28833339-28833358 | None:intergenic | 40.0% | |
| AGCTGTGAATGTCCAAAATC+GGG | + | chr1_3:28833342-28833361 | Msa0113130:intron | 40.0% | |
| !! | CTGAGCTGATTTTTCAGCTT+TGG | + | chr1_3:28833395-28833414 | Msa0113130:intron | 40.0% |
| ! | GCTTTGGTTCGACAAAAATC+GGG | + | chr1_3:28833411-28833430 | Msa0113130:intron | 40.0% |
| !!! | AGTTTTGGCTGACAGGAAAT+CGG | - | chr1_3:28833460-28833479 | None:intergenic | 40.0% |
| !! | AGTTAGCTTTCTAATGGCCT+TGG | + | chr1_3:28833555-28833574 | Msa0113130:intron | 40.0% |
| ! | ATCTTTTCCACTCCAAACCA+AGG | - | chr1_3:28833575-28833594 | None:intergenic | 40.0% |
| ! | AAGTGTTAGGGCTTTAGTTG+AGG | + | chr1_3:28833718-28833737 | Msa0113130:intron | 40.0% |
| TTGCATACTCACATCTGTTG+GGG | + | chr1_3:28833984-28834003 | Msa0113130:intron | 40.0% | |
| GTTTATCATTCACCTGTTGG+GGG | + | chr1_3:28834023-28834042 | Msa0113130:intron | 40.0% | |
| TAAGCCCTCAACAAATTGGA+TGG | - | chr1_3:28834071-28834090 | None:intergenic | 40.0% | |
| CGTTGAATGCTAAACATTCC+AGG | - | chr1_3:28834097-28834116 | None:intergenic | 40.0% | |
| CAACAACTAATGCATCATGC+AGG | - | chr1_3:28834137-28834156 | None:intergenic | 40.0% | |
| TGTTGTTGTCGTAGCATTGT+TGG | + | chr1_3:28834152-28834171 | Msa0113130:intron | 40.0% | |
| GTTGTTGTCGTAGCATTGTT+GGG | + | chr1_3:28834153-28834172 | Msa0113130:intron | 40.0% | |
| ! | GTACTGATGACTTGTAGGTT+TGG | + | chr1_3:28834452-28834471 | Msa0113130:intron | 40.0% |
| ! | TGATGACTTGTAGGTTTGGT+CGG | + | chr1_3:28834456-28834475 | Msa0113130:intron | 40.0% |
| GCTCTGATACATACTAGGAT+GGG | + | chr1_3:28834493-28834512 | Msa0113130:intron | 40.0% | |
| CTCTGATACATACTAGGATG+GGG | + | chr1_3:28834494-28834513 | Msa0113130:intron | 40.0% | |
| TATTACGTTGTTGGGAGAAC+GGG | + | chr1_3:28834807-28834826 | Msa0113130:intron | 40.0% | |
| !! | GAGGAGGATTTTAGGAAGTT+TGG | - | chr1_3:28835004-28835023 | None:intergenic | 40.0% |
| !! | TGTGAACCGTTTTTGTAGTC+TGG | + | chr1_3:28835079-28835098 | Msa0113130:intron | 40.0% |
| !! | TGTGAACCGTTTTTGTCGTT+TGG | + | chr1_3:28835111-28835130 | Msa0113130:intron | 40.0% |
| ! | GATGAGTTTGAAACTAGAGG+GGG | + | chr1_3:28835362-28835381 | Msa0113130:intron | 40.0% |
| ATGCGCGTCGAATATATAAC+AGG | - | chr1_3:28835435-28835454 | None:intergenic | 40.0% | |
| GGAGACATTAAGACTCATGA+AGG | - | chr1_3:28835502-28835521 | None:intergenic | 40.0% | |
| !! | TTGGTTCGAGATTTTTGGAG+GGG | - | chr1_3:28835526-28835545 | None:intergenic | 40.0% |
| !! | GTTTGGTTCGAGATTTTTGG+AGG | - | chr1_3:28835528-28835547 | None:intergenic | 40.0% |
| AAACCAAGTTAGGGTTCGTT+TGG | - | chr1_3:28835545-28835564 | None:intergenic | 40.0% | |
| GGTGAGAAGAGTAAGTTTAG+AGG | + | chr1_3:28836199-28836218 | Msa0113130:intron | 40.0% | |
| AAGGGAGAAAAGTCAGAAGA+AGG | + | chr1_3:28836296-28836315 | Msa0113130:intron | 40.0% | |
| AAGTCAGAAGAAGGAGAACA+AGG | + | chr1_3:28836305-28836324 | Msa0113130:intron | 40.0% | |
| AGTCAGAAGAAGGAGAACAA+GGG | + | chr1_3:28836306-28836325 | Msa0113130:intron | 40.0% | |
| ATTCTGCCAATACCAGGTAA+GGG | + | chr1_3:28836342-28836361 | Msa0113130:intron | 40.0% | |
| !! | AGCATGATTAGGTTGAGGTT+TGG | + | chr1_3:28836415-28836434 | Msa0113130:intron | 40.0% |
| TCGCAAACCAAAACTGTTCT+GGG | - | chr1_3:28836781-28836800 | None:intergenic | 40.0% | |
| ATCGCAAACCAAAACTGTTC+TGG | - | chr1_3:28836782-28836801 | None:intergenic | 40.0% | |
| TGTCTTGAAGTTGCAAGAGT+CGG | + | chr1_3:28837040-28837059 | Msa0113130:intron | 40.0% | |
| TACGTTGTTGTCCAAGTTGT+AGG | + | chr1_3:28837117-28837136 | Msa0113130:intron | 40.0% | |
| GACTCAATCTTCCTACAACT+TGG | - | chr1_3:28837131-28837150 | None:intergenic | 40.0% | |
| TCATTAAAGATGGGGGCTTT+AGG | + | chr1_3:28837161-28837180 | Msa0113130:intron | 40.0% | |
| TAGTTTGAGCATAAAGCTGC+CGG | - | chr1_3:28837188-28837207 | None:intergenic | 40.0% | |
| GCTTTATGCTCAAACTACGT+TGG | + | chr1_3:28837191-28837210 | Msa0113130:intron | 40.0% | |
| TTATGCTCAAACTACGTTGG+GGG | + | chr1_3:28837194-28837213 | Msa0113130:intron | 40.0% | |
| CATATCAAGAAGTTCCACGA+TGG | + | chr1_3:28837301-28837320 | Msa0113130:intron | 40.0% | |
| !! | GCAACATTTTCAAGCAGAAG+GGG | - | chr1_3:28840058-28840077 | None:intergenic | 40.0% |
| !! | GGCAACATTTTCAAGCAGAA+GGG | - | chr1_3:28837591-28837610 | None:intergenic | 40.0% |
| TGAAAATGTTGCCCTTCGTA+TGG | + | chr1_3:28837598-28837617 | Msa0113130:intron | 40.0% | |
| GAAAATGTTGCCCTTCGTAT+GGG | + | chr1_3:28837599-28837618 | Msa0113130:intron | 40.0% | |
| TTGCAGGTAACAAAGACTAG+AGG | + | chr1_3:28837626-28837645 | Msa0113130:intron | 40.0% | |
| TTTGGGAAGATCTCAAAGAG+AGG | + | chr1_3:28838107-28838126 | Msa0113130:intron | 40.0% | |
| GGGATGTGGACAAAAACAAT+TGG | - | chr1_3:28838272-28838291 | None:intergenic | 40.0% | |
| CGCAAAGTTTCACATCTACA+GGG | - | chr1_3:28838292-28838311 | None:intergenic | 40.0% | |
| ACGCAAAGTTTCACATCTAC+AGG | - | chr1_3:28838293-28838312 | None:intergenic | 40.0% | |
| ! | AGTTGTAGCAGAATGATGGA+AGG | - | chr1_3:28838379-28838398 | None:intergenic | 40.0% |
| ! | GGGGGGAATGAATTTTGTAT+TGG | - | chr1_3:28838477-28838496 | None:intergenic | 40.0% |
| ! | ATATAGGTTGAAGGAATGGG+GGG | - | chr1_3:28838495-28838514 | None:intergenic | 40.0% |
| ! | GATATAGGTTGAAGGAATGG+GGG | - | chr1_3:28838496-28838515 | None:intergenic | 40.0% |
| CTAGTGCTAATCTATCTTCG+AGG | + | chr1_3:28838515-28838534 | Msa0113130:intron | 40.0% | |
| TGAGGAGTTAAACGTTATGG+TGG | - | chr1_3:28838544-28838563 | None:intergenic | 40.0% | |
| AGGTGAGGAGTTAAACGTTA+TGG | - | chr1_3:28838547-28838566 | None:intergenic | 40.0% | |
| !! | AAGTTTGAGTCTTTGAGGTG+AGG | - | chr1_3:28838562-28838581 | None:intergenic | 40.0% |
| CAGAGAAGTTTGAGTCTTTG+AGG | - | chr1_3:28838567-28838586 | None:intergenic | 40.0% | |
| GGTGAAACATCTATGTGGAA+TGG | + | chr1_3:28838603-28838622 | Msa0113130:intron | 40.0% | |
| AAATTTCGACAGGAATCTGC+AGG | - | chr1_3:28838658-28838677 | None:intergenic | 40.0% | |
| TAGTAAGCCTCGTAAGGTTT+AGG | - | chr1_3:28838698-28838717 | None:intergenic | 40.0% | |
| GTACATAAGAGGATGGATAG+AGG | - | chr1_3:28838787-28838806 | None:intergenic | 40.0% | |
| ! | TTTTATTATGTCCCCACAGG+CGG | - | chr1_3:28838867-28838886 | None:intergenic | 40.0% |
| ! | TAGTTGGTATTAGTGCAGGT+CGG | - | chr1_3:28838913-28838932 | None:intergenic | 40.0% |
| TATATGGTAACACTAGGGTC+GGG | - | chr1_3:28839190-28839209 | None:intergenic | 40.0% | |
| !! | TAGCTATGGGACGTTTTAGA+AGG | - | chr1_3:28839286-28839305 | None:intergenic | 40.0% |
| GGTTAACAAGGAGTAGCTAT+GGG | - | chr1_3:28839299-28839318 | None:intergenic | 40.0% | |
| AGGTTAACAAGGAGTAGCTA+TGG | - | chr1_3:28839300-28839319 | None:intergenic | 40.0% | |
| !! | CATAATTAGTCTTGGCACGA+AGG | + | chr1_3:28839499-28839518 | Msa0113130:intron | 40.0% |
| TTAGGTGCTCTGATACGTAA+CGG | - | chr1_3:28839625-28839644 | None:intergenic | 40.0% | |
| CTATCTCTCACTGTGTCTTT+AGG | - | chr1_3:28839643-28839662 | None:intergenic | 40.0% | |
| TAGGTGCTCTGATACGTAAT+GGG | - | chr1_3:28839963-28839982 | None:intergenic | 40.0% | |
| TTAGGTGCTCTGATACGTAA+TGG | - | chr1_3:28839625-28839644 | None:intergenic | 40.0% | |
| ! | CAGGTAACCAAGATTAGTTG+CGG | - | chr1_3:28840019-28840038 | None:intergenic | 40.0% |
| !! | GAGCAACATTTTCAAGCAGA+AGG | + | chr1_3:28840056-28840075 | Msa0113130:intron | 40.0% |
| !! | GCAACATTTTCAAGCAGAAG+GGG | + | chr1_3:28840058-28840077 | Msa0113130:intron | 40.0% |
| AATGCATGTGGTACCATTCT+AGG | + | chr1_3:28840733-28840752 | Msa0113130:intron | 40.0% | |
| ATGCATGTGGTACCATTCTA+GGG | + | chr1_3:28840734-28840753 | Msa0113130:intron | 40.0% | |
| TTTATGCTCAACGACGATGA+GGG | - | chr1_3:28840766-28840785 | None:intergenic | 40.0% | |
| ATTTATGCTCAACGACGATG+AGG | - | chr1_3:28840767-28840786 | None:intergenic | 40.0% | |
| TGGGTTTAGCAAAAGCTCTA+GGG | + | chr1_3:28840817-28840836 | Msa0113130:intron | 40.0% | |
| GACTCAACATCTTACGTCTT+AGG | + | chr1_3:28840872-28840891 | Msa0113130:intron | 40.0% | |
| TGATATCTTTCCAGTAGCCT+TGG | - | chr1_3:28841180-28841199 | None:intergenic | 40.0% | |
| GAGGTCTTAGCGAAATTGTA+CGG | - | chr1_3:28841297-28841316 | None:intergenic | 40.0% | |
| !! | ATCGGTACAGAATTGGTCTT+AGG | - | chr1_3:28841422-28841441 | None:intergenic | 40.0% |
| !! | GGTATTGATCGGTACAGAAT+TGG | - | chr1_3:28841429-28841448 | None:intergenic | 40.0% |
| GGTGTAAACACGAAAGTTGT+AGG | - | chr1_3:28841594-28841613 | None:intergenic | 40.0% | |
| GGGTTTAGGGGATTCAAAAT+TGG | - | chr1_3:28841726-28841745 | None:intergenic | 40.0% | |
| GAATCCCCTAAACCCAAATT+TGG | + | chr1_3:28841731-28841750 | Msa0113130:intron | 40.0% | |
| ! | TGGGACCAAATTTGGGTTTA+GGG | - | chr1_3:28841739-28841758 | None:intergenic | 40.0% |
| ! | TTGGGACCAAATTTGGGTTT+AGG | - | chr1_3:28841740-28841759 | None:intergenic | 40.0% |
| AGGCTCCATCGATAATTCTA+AGG | - | chr1_3:28842184-28842203 | None:intergenic | 40.0% | |
| AGACAAAGAGAAGAGAGAAG+AGG | - | chr1_3:28842204-28842223 | None:intergenic | 40.0% | |
| ! | ATGTTGATTGTTGTCGTGAG+TGG | - | chr1_3:28842867-28842886 | None:intergenic | 40.0% |
| AGCAACATTTCCAAGCAGAA+GGG | + | chr1_3:28842926-28842945 | Msa0113130:intron | 40.0% | |
| ATGCATGTGGTACCATTCTA+GGG | + | chr1_3:28840734-28840753 | Msa0113130:intron | 40.0% | |
| TTTATGCTCAAAAGCGACGA+GGG | - | chr1_3:28843178-28843197 | None:intergenic | 40.0% | |
| ATTTATGCTCAAAAGCGACG+AGG | - | chr1_3:28843179-28843198 | None:intergenic | 40.0% | |
| CTATTGAGCAAAAGCTCCTA+GGG | + | chr1_3:28843226-28843245 | Msa0113130:intron | 40.0% | |
| GAGGTCTTAGCGAAATTGTA+CGG | - | chr1_3:28841297-28841316 | None:intergenic | 40.0% | |
| CAATTTCGCTAAGACCTCAT+TGG | + | chr1_3:28843682-28843701 | Msa0113130:intron | 40.0% | |
| AACTTTCATGGTTACACCCA+AGG | + | chr1_3:28843786-28843805 | Msa0113130:intron | 40.0% | |
| ATGGTCAAATTACTGCACGT+AGG | - | chr1_3:28843892-28843911 | None:intergenic | 40.0% | |
| AAACACGAAAGCTGTAGGTA+TGG | - | chr1_3:28843972-28843991 | None:intergenic | 40.0% | |
| !! | ATCGGTACAGAATTGGTCTT+AGG | - | chr1_3:28841422-28841441 | None:intergenic | 40.0% |
| GGTGTAAACACGAAAGTTGT+AGG | - | chr1_3:28841594-28841613 | None:intergenic | 40.0% | |
| !! | ATCGGTGTGGAATTAGTCTT+AGG | - | chr1_3:28844191-28844210 | None:intergenic | 40.0% |
| !! | AAAACTGGTATTGATCGGTG+TGG | - | chr1_3:28844204-28844223 | None:intergenic | 40.0% |
| TGTTGAGAGTGAAGATATGG+TGG | - | chr1_3:28845060-28845079 | None:intergenic | 40.0% | |
| !! | TGATGATGTTTTGTGCTTGG+TGG | - | chr1_3:28845145-28845164 | None:intergenic | 40.0% |
| CCACATTCATATAGGTCGAT+AGG | - | chr1_3:28845188-28845207 | None:intergenic | 40.0% | |
| CCTATCGACCTATATGAATG+TGG | + | chr1_3:28845185-28845204 | Msa0113130:intron | 40.0% | |
| TGTTATTCCCAATGATGAGG+AGG | - | chr1_3:28845218-28845237 | None:intergenic | 40.0% | |
| !! | AGGTGTTATTCCCAATGATG+AGG | - | chr1_3:28845221-28845240 | None:intergenic | 40.0% |
| TCATTGGGAATAACACCTGT+AGG | + | chr1_3:28845223-28845242 | Msa0113130:intron | 40.0% | |
| CATTGGGAATAACACCTGTA+GGG | + | chr1_3:28845224-28845243 | Msa0113130:intron | 40.0% | |
| ATGTTATGGTTTCTCTGCAG+AGG | - | chr1_3:28845405-28845424 | None:intergenic | 40.0% | |
| AGGAGAAGGGTTTGATGTTA+TGG | - | chr1_3:28845419-28845438 | None:intergenic | 40.0% | |
| ATCTAATTCCAATCTGCAGG+AGG | - | chr1_3:28845439-28845458 | None:intergenic | 40.0% | |
| CTGCGAAAACAAATTGTTGC+TGG | + | chr1_3:28845525-28845544 | Msa0113130:intron | 40.0% | |
| GACACTGAGAAGAATGACAA+AGG | + | chr1_3:28846170-28846189 | Msa0113130:intron | 40.0% | |
| ! | TTTTAGCAGTAAAGTGGCCT+TGG | - | chr1_3:28846250-28846269 | None:intergenic | 40.0% |
| !! | GGAGTACTTTTGCAGCATAT+TGG | + | chr1_3:28847081-28847100 | Msa0113130:intron | 40.0% |
| TCTGGAAATGCATGTGTAAC+TGG | + | chr1_3:28847250-28847269 | Msa0113130:intron | 40.0% | |
| GTATGAAAATGACCCCATGT+TGG | + | chr1_3:28847289-28847308 | Msa0113130:intron | 40.0% | |
| GAACATGGAAGATGTGTGAA+GGG | - | chr1_3:28847493-28847512 | None:intergenic | 40.0% | |
| TGATGATCATTGTCTTGTGC+AGG | + | chr1_3:28847583-28847602 | Msa0113130:intron | 40.0% | |
| AGCTTTGCCAATCATCTTCA+AGG | - | chr1_3:28847618-28847637 | None:intergenic | 40.0% | |
| TTAATGCTAAGGTTATGGCG+TGG | - | chr1_3:28848479-28848498 | None:intergenic | 40.0% | |
| CATGCCTGAATCAAACTTGA+TGG | - | chr1_3:28848555-28848574 | None:intergenic | 40.0% | |
| AGAAGATCAACCTGATGTAG+AGG | - | chr1_3:28848601-28848620 | None:intergenic | 40.0% | |
| !! | GAACTTTGTTCGAGTTGGTT+CGG | + | chr1_3:28848787-28848806 | Msa0113130:intron | 40.0% |
| ! | TTCAGAGCACTAATCCTTGT+AGG | - | chr1_3:28848866-28848885 | None:intergenic | 40.0% |
| ! | CAACCTGTAAAGAGTATGGT+TGG | - | chr1_3:28848943-28848962 | None:intergenic | 40.0% |
| ACCATACTCTTTACAGGTTG+CGG | + | chr1_3:28848943-28848962 | Msa0113130:intron | 40.0% | |
| TTGCGGAAATCCTGAAGATT+CGG | + | chr1_3:28848960-28848979 | Msa0113130:CDS | 40.0% | |
| ATGAATCCTCTTCAATGGTG+TGG | + | chr1_3:28849019-28849038 | Msa0113130:CDS | 40.0% | |
| TGAATCCTCTTCAATGGTGT+GGG | + | chr1_3:28849020-28849039 | Msa0113130:CDS | 40.0% | |
| ATCACTCTCAAGAGTTCCGA+CGG | + | chr1_3:28830485-28830504 | Msa0113130:CDS | 45.0% | |
| ! | CAAGATCTTGCTGGTAACGT+TGG | - | chr1_3:28830606-28830625 | None:intergenic | 45.0% |
| CAACGTTACCAGCAAGATCT+TGG | + | chr1_3:28830604-28830623 | Msa0113130:CDS | 45.0% | |
| TGCTGAAGACAAACCTAACG+AGG | + | chr1_3:28830670-28830689 | Msa0113130:CDS | 45.0% | |
| GACTTAAGCTCATCCTCGTT+AGG | - | chr1_3:28830686-28830705 | None:intergenic | 45.0% | |
| ACGAGGATGAGCTTAAGTCT+TGG | + | chr1_3:28830687-28830706 | Msa0113130:CDS | 45.0% | |
| CGAGGATGAGCTTAAGTCTT+GGG | + | chr1_3:28830688-28830707 | Msa0113130:CDS | 45.0% | |
| TGAATATGAGGCAGAGAAGG+TGG | + | chr1_3:28830931-28830950 | Msa0113130:intron | 45.0% | |
| !! | GCAACCACATTAGCTTTACC+CGG | - | chr1_3:28830999-28831018 | None:intergenic | 45.0% |
| ! | GTGCAACGTTTTCCTACTCA+AGG | - | chr1_3:28831027-28831046 | None:intergenic | 45.0% |
| AGGAAAACGTTGCACATGTC+GGG | + | chr1_3:28831032-28831051 | Msa0113130:intron | 45.0% | |
| !! | GAAGAGTATCAAAGAAGCCC+AGG | + | chr1_3:28831169-28831188 | Msa0113130:intron | 45.0% |
| AGCAACTTGAGTATCCATCC+GGG | + | chr1_3:28831350-28831369 | Msa0113130:intron | 45.0% | |
| TGGTACATCTTTGTAGCTCC+CGG | - | chr1_3:28831371-28831390 | None:intergenic | 45.0% | |
| TTCCATTCCGGCACATCTAA+AGG | - | chr1_3:28831515-28831534 | None:intergenic | 45.0% | |
| TCATGCCCTCTTTGAGTGTT+TGG | - | chr1_3:28831575-28831594 | None:intergenic | 45.0% | |
| ! | AAAGAGGGCATGATGCCATT+TGG | + | chr1_3:28831582-28831601 | Msa0113130:intron | 45.0% |
| ! | AAGAGGGCATGATGCCATTT+GGG | + | chr1_3:28831583-28831602 | Msa0113130:intron | 45.0% |
| TATCCGACACAATACTCGAC+GGG | - | chr1_3:28831721-28831740 | None:intergenic | 45.0% | |
| CTATCCGACACAATACTCGA+CGG | - | chr1_3:28831722-28831741 | None:intergenic | 45.0% | |
| ! | CGAGGTTCACTTCGAGATTT+TGG | + | chr1_3:28831747-28831766 | Msa0113130:intron | 45.0% |
| GAAGAGCTTGCAAGAAGCTT+TGG | + | chr1_3:28831769-28831788 | Msa0113130:intron | 45.0% | |
| GCTTATCATCCGCAAACAGA+TGG | + | chr1_3:28831815-28831834 | Msa0113130:intron | 45.0% | |
| AAACAGATGGTCAGTCGGAA+AGG | + | chr1_3:28831828-28831847 | Msa0113130:intron | 45.0% | |
| GTGCCATACCAATACTCGAA+TGG | - | chr1_3:28831958-28831977 | None:intergenic | 45.0% | |
| CCCGACTCAAACCAACATAA+AGG | - | chr1_3:28832016-28832035 | None:intergenic | 45.0% | |
| !! | GTCGGGTGAAAGTATTGTGT+TGG | + | chr1_3:28832030-28832049 | Msa0113130:intron | 45.0% |
| GAAAGACCTCGAGTTTCAAG+AGG | + | chr1_3:28832153-28832172 | Msa0113130:intron | 45.0% | |
| GAGTGACTCTCAAGAACACA+TGG | - | chr1_3:28832183-28832202 | None:intergenic | 45.0% | |
| TTGAGAGTCACTCCTATGAC+CGG | + | chr1_3:28832190-28832209 | Msa0113130:intron | 45.0% | |
| ! | GCAACTTCGGAAGTATGTAG+CGG | + | chr1_3:28832354-28832373 | Msa0113130:intron | 45.0% |
| AGTTAGGGACAATCTTACGG+TGG | + | chr1_3:28832411-28832430 | Msa0113130:intron | 45.0% | |
| CGGTGGAAACTTTACCTTTG+AGG | + | chr1_3:28832428-28832447 | Msa0113130:intron | 45.0% | |
| TACCTCTAGTGAGGGTTGTT+TGG | + | chr1_3:28832491-28832510 | Msa0113130:intron | 45.0% | |
| ACCTCTAGTGAGGGTTGTTT+GGG | + | chr1_3:28832492-28832511 | Msa0113130:intron | 45.0% | |
| CTCTTCTCTTTGCCTCTTCT+AGG | - | chr1_3:28833029-28833048 | None:intergenic | 45.0% | |
| CTAGAAGAGGCAAAGAGAAG+AGG | + | chr1_3:28833027-28833046 | Msa0113130:intron | 45.0% | |
| !! | TTTTGGCTGACAGGAAATCG+GGG | - | chr1_3:28833458-28833477 | None:intergenic | 45.0% |
| !!! | GTTTTGGCTGACAGGAAATC+GGG | - | chr1_3:28833459-28833478 | None:intergenic | 45.0% |
| GATTTCCTGTCAGCCAAAAC+TGG | + | chr1_3:28833459-28833478 | Msa0113130:intron | 45.0% | |
| !!! | GTTTTCCAGTTTTGGCTGAC+AGG | - | chr1_3:28833467-28833486 | None:intergenic | 45.0% |
| ! | GCTTTCTAATGGCCTTGGTT+TGG | + | chr1_3:28833560-28833579 | Msa0113130:intron | 45.0% |
| TGCATACTCACATCTGTTGG+GGG | + | chr1_3:28833985-28834004 | Msa0113130:intron | 45.0% | |
| ! | TGGATGGTTAAAGCATCCCA+GGG | - | chr1_3:28834055-28834074 | None:intergenic | 45.0% |
| ! | TTGGATGGTTAAAGCATCCC+AGG | - | chr1_3:28834056-28834075 | None:intergenic | 45.0% |
| GGCATAAGCCCTCAACAAAT+TGG | - | chr1_3:28834075-28834094 | None:intergenic | 45.0% | |
| CAACTAATGCATCATGCAGG+TGG | - | chr1_3:28834134-28834153 | None:intergenic | 45.0% | |
| ! | TTGTCGCATTGTCGAGTTGT+CGG | + | chr1_3:28834213-28834232 | Msa0113130:intron | 45.0% |
| AGGCAACATATACGCAGAAG+GGG | - | chr1_3:28834412-28834431 | None:intergenic | 45.0% | |
| GAGGCAACATATACGCAGAA+GGG | - | chr1_3:28834413-28834432 | None:intergenic | 45.0% | |
| !! | TGCAGGTACTGATGACTTGT+AGG | + | chr1_3:28834447-28834466 | Msa0113130:intron | 45.0% |
| ! | CTAGGGCTCTGATACATACT+AGG | + | chr1_3:28834488-28834507 | Msa0113130:intron | 45.0% |
| ! | GGCTCTGATACATACTAGGA+TGG | + | chr1_3:28834492-28834511 | Msa0113130:intron | 45.0% |
| ATTACGTTGTTGGGAGAACG+GGG | + | chr1_3:28834808-28834827 | Msa0113130:intron | 45.0% | |
| !! | GAGGCACTGAGTGAAATAGA+CGG | + | chr1_3:28835237-28835256 | Msa0113130:intron | 45.0% |
| GAACCAAACGAACCCTAACT+TGG | + | chr1_3:28835539-28835558 | Msa0113130:intron | 45.0% | |
| ATGGCTGTAACTACCACACA+TGG | + | chr1_3:28835890-28835909 | Msa0113130:intron | 45.0% | |
| ACATGAAACGACTCCATGTG+TGG | - | chr1_3:28835906-28835925 | None:intergenic | 45.0% | |
| !! | ACGTAACGCTTTTGGAGAGA+AGG | + | chr1_3:28836277-28836296 | Msa0113130:intron | 45.0% |
| !! | CGTAACGCTTTTGGAGAGAA+GGG | + | chr1_3:28836278-28836297 | Msa0113130:intron | 45.0% |
| GCTATGATTCTGCCAATACC+AGG | + | chr1_3:28836336-28836355 | Msa0113130:intron | 45.0% | |
| GATTCTGCCAATACCAGGTA+AGG | + | chr1_3:28836341-28836360 | Msa0113130:intron | 45.0% | |
| ! | AAGTTAGTCTCACCCTTACC+TGG | - | chr1_3:28836357-28836376 | None:intergenic | 45.0% |
| AACTACAGGTCAACTCGCAA+TGG | - | chr1_3:28836757-28836776 | None:intergenic | 45.0% | |
| ! | AAACTGTTCTGGGCAACTAC+AGG | - | chr1_3:28836771-28836790 | None:intergenic | 45.0% |
| ! | GTAGTTGCCCAGAACAGTTT+TGG | + | chr1_3:28836771-28836790 | Msa0113130:intron | 45.0% |
| TTCATGACTACACGTGCGAA+GGG | - | chr1_3:28836805-28836824 | None:intergenic | 45.0% | |
| ATTCATGACTACACGTGCGA+AGG | - | chr1_3:28836806-28836825 | None:intergenic | 45.0% | |
| AGTATGAAGGAGGGCTGTTT+AGG | + | chr1_3:28836836-28836855 | Msa0113130:intron | 45.0% | |
| AGTTTGAGCATAAAGCTGCC+GGG | - | chr1_3:28837187-28837206 | None:intergenic | 45.0% | |
| TCAAGTGAGCATAAAGCTGC+CGG | - | chr1_3:28837228-28837247 | None:intergenic | 45.0% | |
| !! | CATTGTCAAGTTGAGTCGTG+TGG | + | chr1_3:28837351-28837370 | Msa0113130:intron | 45.0% |
| !! | GGGCAACATTTTCAAGCAGA+AGG | - | chr1_3:28837592-28837611 | None:intergenic | 45.0% |
| CTGCAAGTTACCCATACGAA+GGG | - | chr1_3:28840036-28840055 | None:intergenic | 45.0% | |
| GTGGACTCATCATTGTGTCT+AGG | + | chr1_3:28837658-28837677 | Msa0113130:intron | 45.0% | |
| CTAGGTGCTCTGATACGTAA+CGG | + | chr1_3:28837676-28837695 | Msa0113130:intron | 45.0% | |
| TAGGTGCTCTGATACGTAAC+GGG | + | chr1_3:28837677-28837696 | Msa0113130:intron | 45.0% | |
| TGATAAAAGTCTTGGCACGC+AGG | - | chr1_3:28837787-28837806 | None:intergenic | 45.0% | |
| ! | GGTGTTACATAGCATGCTCT+TGG | + | chr1_3:28837965-28837984 | Msa0113130:intron | 45.0% |
| ! | CTAACTTGAATAGAGGTGCG+TGG | + | chr1_3:28838041-28838060 | Msa0113130:intron | 45.0% |
| ! | TGAATAGAGGTGCGTGGTAA+AGG | + | chr1_3:28838047-28838066 | Msa0113130:intron | 45.0% |
| GTTTCACATCTACAGGGATG+TGG | - | chr1_3:28838286-28838305 | None:intergenic | 45.0% | |
| ! | TATAGGTTGAAGGAATGGGG+GGG | - | chr1_3:28838494-28838513 | None:intergenic | 45.0% |
| AAATTTCCACCCTCCCTCAT+CGG | + | chr1_3:28838672-28838691 | Msa0113130:intron | 45.0% | |
| TTACGAGGCTTACTACACTC+CGG | + | chr1_3:28838703-28838722 | Msa0113130:intron | 45.0% | |
| AGAGAAGGCAGGTAAGAATC+CGG | - | chr1_3:28838725-28838744 | None:intergenic | 45.0% | |
| ATATGGTAACACTAGGGTCG+GGG | - | chr1_3:28839189-28839208 | None:intergenic | 45.0% | |
| AGTCGCTACGAGCTCTTATA+TGG | - | chr1_3:28839206-28839225 | None:intergenic | 45.0% | |
| !!! | CTATGGGACGTTTTAGAAGG+TGG | - | chr1_3:28839283-28839302 | None:intergenic | 45.0% |
| ACGGGATGTTACAGATACTC+AGG | - | chr1_3:28839320-28839339 | None:intergenic | 45.0% | |
| ! | TAACGGGATGGGAACTTTTG+TGG | - | chr1_3:28839608-28839627 | None:intergenic | 45.0% |
| TAGGTGCTCTGATACGTAAC+GGG | - | chr1_3:28837677-28837696 | None:intergenic | 45.0% | |
| ! | GCTCTGATACGTAATGGGAT+GGG | - | chr1_3:28839958-28839977 | None:intergenic | 45.0% |
| ! | TGCTCTGATACGTAATGGGA+TGG | - | chr1_3:28839959-28839978 | None:intergenic | 45.0% |
| CTCACAAGTGTGTGTGTCTT+AGG | - | chr1_3:28839982-28840001 | None:intergenic | 45.0% | |
| CTAAGACACACACACTTGTG+AGG | + | chr1_3:28839980-28839999 | Msa0113130:intron | 45.0% | |
| ! | TCTTCGTATGGGTAACTTGC+AGG | - | chr1_3:28840038-28840057 | None:intergenic | 45.0% |
| GTGGGTTTAGCAAAAGCTCT+AGG | + | chr1_3:28840816-28840835 | Msa0113130:intron | 45.0% | |
| TCATGTCAAACCAAGGCTAC+TGG | + | chr1_3:28841167-28841186 | Msa0113130:intron | 45.0% | |
| CAATTTCGCTAAGACCTCCT+TGG | + | chr1_3:28841299-28841318 | Msa0113130:intron | 45.0% | |
| TCACATCAAACCAAAGCCAC+TGG | + | chr1_3:28841359-28841378 | Msa0113130:intron | 45.0% | |
| !! | TGTTAGCTTTCCAGTGGCTT+TGG | - | chr1_3:28841372-28841391 | None:intergenic | 45.0% |
| CTGTCAGAGATGATAGCTCT+CGG | + | chr1_3:28841673-28841692 | Msa0113130:intron | 45.0% | |
| TGTCAGAGATGATAGCTCTC+GGG | + | chr1_3:28841674-28841693 | Msa0113130:intron | 45.0% | |
| ! | GGGACCAAATTTGGGTTTAG+GGG | - | chr1_3:28841738-28841757 | None:intergenic | 45.0% |
| GAGCAACATTTCCAAGCAGA+AGG | + | chr1_3:28842925-28842944 | Msa0113130:intron | 45.0% | |
| GCAACATTTCCAAGCAGAAG+GGG | + | chr1_3:28842927-28842946 | Msa0113130:intron | 45.0% | |
| CATGCATGTGGTACCATTCT+AGG | + | chr1_3:28843145-28843164 | Msa0113130:intron | 45.0% | |
| ! | CTTTTGCTCAATAGCGACGA+GGG | - | chr1_3:28843220-28843239 | None:intergenic | 45.0% |
| GCTATTGAGCAAAAGCTCCT+AGG | + | chr1_3:28843225-28843244 | Msa0113130:intron | 45.0% | |
| !! | TGTTAGCTTTCCAGTGGCTT+TGG | - | chr1_3:28841372-28841391 | None:intergenic | 45.0% |
| !! | GGTATTGACCGGTACAGAAT+TGG | - | chr1_3:28843812-28843831 | None:intergenic | 45.0% |
| GGTGTAAACACGAAAGCTGT+AGG | - | chr1_3:28843977-28843996 | None:intergenic | 45.0% | |
| !! | CTCTGGTTCTTCTCTTCTCT+AGG | + | chr1_3:28844569-28844588 | Msa0113130:intron | 45.0% |
| ATTACGTGCAAGGGAGAAAG+AGG | - | chr1_3:28844600-28844619 | None:intergenic | 45.0% | |
| !! | GAGTGGTGCCACATTCATAT+AGG | - | chr1_3:28845196-28845215 | None:intergenic | 45.0% |
| ACATCAGTCGCATATACCTG+TGG | + | chr1_3:28845294-28845313 | Msa0113130:intron | 45.0% | |
| CATCAGTCGCATATACCTGT+GGG | + | chr1_3:28845295-28845314 | Msa0113130:intron | 45.0% | |
| ATCAGTCGCATATACCTGTG+GGG | + | chr1_3:28845296-28845315 | Msa0113130:intron | 45.0% | |
| !!! | GTGACTTGTTTTTTCCCCAC+AGG | - | chr1_3:28845313-28845332 | None:intergenic | 45.0% |
| TTGAACCTTAACAGGGTGAC+TGG | + | chr1_3:28846107-28846126 | Msa0113130:intron | 45.0% | |
| ACATAAGCAGGGGTTGTGTA+TGG | - | chr1_3:28846544-28846563 | None:intergenic | 45.0% | |
| TGATTAAGTAGTGGTCCCAC+AGG | + | chr1_3:28846696-28846715 | Msa0113130:intron | 45.0% | |
| GATATGGTATGAGAGCCTGT+GGG | - | chr1_3:28846714-28846733 | None:intergenic | 45.0% | |
| TGATATGGTATGAGAGCCTG+TGG | - | chr1_3:28846715-28846734 | None:intergenic | 45.0% | |
| GGAACATGGAAGATGTGTGA+AGG | - | chr1_3:28847494-28847513 | None:intergenic | 45.0% | |
| GATGATTGGCAAAGCTAGAG+TGG | + | chr1_3:28847622-28847641 | Msa0113130:CDS | 45.0% | |
| ! | ACAACTTGTTCCTGCACTCA+AGG | + | chr1_3:28847725-28847744 | Msa0113130:CDS | 45.0% |
| AGTTCAGATACCTTGAGTGC+AGG | - | chr1_3:28847738-28847757 | None:intergenic | 45.0% | |
| GTCTCGAACTTTGTTCGAGT+TGG | + | chr1_3:28848782-28848801 | Msa0113130:intron | 45.0% | |
| TTGTAGGTTCTTGACCCACT+AGG | - | chr1_3:28848850-28848869 | None:intergenic | 45.0% | |
| ! | TAGTGGGTCAAGAACCTACA+AGG | + | chr1_3:28848849-28848868 | Msa0113130:intron | 45.0% |
| TCCGCAACCTGTAAAGAGTA+TGG | - | chr1_3:28848947-28848966 | None:intergenic | 45.0% | |
| AGATTCGGACTTCGTGGTAT+CGG | + | chr1_3:28848975-28848994 | Msa0113130:CDS | 45.0% | |
| AACTTCCCACACCATTGAAG+AGG | - | chr1_3:28849028-28849047 | None:intergenic | 45.0% | |
| !! | GAATTATATATTATTATTAT+TGG | + | chr1_3:28834374-28834393 | Msa0113130:intron | 5.0% |
| !! | TATATAAATCTTAAATTATT+TGG | + | chr1_3:28835652-28835671 | Msa0113130:intron | 5.0% |
| !! | AATTAATTAAATAATTAAGA+CGG | - | chr1_3:28835941-28835960 | None:intergenic | 5.0% |
| !! | AAATAAAAATATTAAAAATG+GGG | + | chr1_3:28836170-28836189 | Msa0113130:intron | 5.0% |
| !! | AAATAATTAAATAATTGAAA+CGG | + | chr1_3:28842833-28842852 | Msa0113130:intron | 5.0% |
| !! | AAATTGTAAAAAAATATTAA+TGG | - | chr1_3:28846394-28846413 | None:intergenic | 5.0% |
| !!! | TTAATATTTTTTTACAATTT+CGG | + | chr1_3:28846394-28846413 | Msa0113130:intron | 5.0% |
| !!! | TATAATTTGTTAAAAAAAAT+TGG | - | chr1_3:28846509-28846528 | None:intergenic | 5.0% |
| !! | GATTATAAAATAATATAAAT+TGG | - | chr1_3:28848224-28848243 | None:intergenic | 5.0% |
| !!! | ATTAGTATTTTTAATTTTAT+AGG | + | chr1_3:28848660-28848679 | Msa0113130:intron | 5.0% |
| ! | TGCTGGTAACGTTGGGAAGA+GGG | - | chr1_3:28830598-28830617 | None:intergenic | 50.0% |
| ! | TTGCTGGTAACGTTGGGAAG+AGG | - | chr1_3:28830599-28830618 | None:intergenic | 50.0% |
| TACCAGCAAGATCTTGGCGA+AGG | + | chr1_3:28830610-28830629 | Msa0113130:CDS | 50.0% | |
| TTGGGATTCCGAGTTCGTCA+AGG | + | chr1_3:28830706-28830725 | Msa0113130:intron | 50.0% | |
| !! | CCACATTAGCTTTACCCGGA+TGG | - | chr1_3:28830995-28831014 | None:intergenic | 50.0% |
| CCATCCGGGTAAAGCTAATG+TGG | + | chr1_3:28830992-28831011 | Msa0113130:intron | 50.0% | |
| TGGTTGCAGATGCCTTGAGT+AGG | + | chr1_3:28831012-28831031 | Msa0113130:intron | 50.0% | |
| GTTGCACATGTCGGGTATGA+TGG | + | chr1_3:28831040-28831059 | Msa0113130:intron | 50.0% | |
| ATACCCAACTGCACACTCTG+AGG | - | chr1_3:28831125-28831144 | None:intergenic | 50.0% | |
| GAGTATCAAAGAAGCCCAGG+AGG | + | chr1_3:28831172-28831191 | Msa0113130:intron | 50.0% | |
| !! | CAAGGAGTGTTGAGATTCCG+AGG | + | chr1_3:28831266-28831285 | Msa0113130:intron | 50.0% |
| !! | GAGTGTTGAGATTCCGAGGT+AGG | + | chr1_3:28831270-28831289 | Msa0113130:intron | 50.0% |
| ACATCTTTGTAGCTCCCGGA+TGG | - | chr1_3:28831367-28831386 | None:intergenic | 50.0% | |
| GTTGAACATCAGAAGCCTGC+TGG | + | chr1_3:28831479-28831498 | Msa0113130:intron | 50.0% | |
| !! | AAAGGCGTCAACAAACCAGC+AGG | - | chr1_3:28831497-28831516 | None:intergenic | 50.0% |
| GTTGACGCCTTTAGATGTGC+CGG | + | chr1_3:28831505-28831524 | Msa0113130:intron | 50.0% | |
| ! | TGTCCCGTCGAGTATTGTGT+CGG | + | chr1_3:28831715-28831734 | Msa0113130:intron | 50.0% |
| TTGTGTCGGATAGAGATCCG+AGG | + | chr1_3:28831729-28831748 | Msa0113130:intron | 50.0% | |
| TCCGCAAACAGATGGTCAGT+CGG | + | chr1_3:28831823-28831842 | Msa0113130:intron | 50.0% | |
| TCCGACTGACCATCTGTTTG+CGG | - | chr1_3:28831827-28831846 | None:intergenic | 50.0% | |
| AGGGTGTGTGTACTTGAGCA+AGG | + | chr1_3:28831878-28831897 | Msa0113130:intron | 50.0% | |
| GTGTGTGTACTTGAGCAAGG+TGG | + | chr1_3:28831881-28831900 | Msa0113130:intron | 50.0% | |
| TACTTGAGCAAGGTGGAGCT+TGG | + | chr1_3:28831888-28831907 | Msa0113130:intron | 50.0% | |
| ACTTGAGCAAGGTGGAGCTT+GGG | + | chr1_3:28831889-28831908 | Msa0113130:intron | 50.0% | |
| AGTTCAGCAGACTACGGAGA+AGG | + | chr1_3:28832063-28832082 | Msa0113130:intron | 50.0% | |
| ATCTGAGAGAATTGGCACGG+TGG | + | chr1_3:28832273-28832292 | Msa0113130:intron | 50.0% | |
| GGCACGGTGGCTTATAAAGT+TGG | + | chr1_3:28832286-28832305 | Msa0113130:intron | 50.0% | |
| CGTAAGGTGAAGACGTTGAG+AGG | + | chr1_3:28832460-28832479 | Msa0113130:intron | 50.0% | |
| CCTCTAGTGAGGGTTGTTTG+GGG | + | chr1_3:28832493-28832512 | Msa0113130:intron | 50.0% | |
| GAAGAGGCAAAGAGAAGAGG+AGG | + | chr1_3:28833030-28833049 | Msa0113130:intron | 50.0% | |
| !! | CTAATGGCCTTGGTTTGGAG+TGG | + | chr1_3:28833565-28833584 | Msa0113130:intron | 50.0% |
| TTTGTTGAGGGCTTATGCCC+TGG | + | chr1_3:28834076-28834095 | Msa0113130:intron | 50.0% | |
| AGCATTCAACGCGCGTAGAT+TGG | + | chr1_3:28834106-28834125 | Msa0113130:intron | 50.0% | |
| CGAGGCAACATATACGCAGA+AGG | - | chr1_3:28834414-28834433 | None:intergenic | 50.0% | |
| GTATATGTTGCCTCGACCGT+GGG | + | chr1_3:28834419-28834438 | Msa0113130:intron | 50.0% | |
| CAGTACCTGCACATTACCCA+CGG | - | chr1_3:28834438-28834457 | None:intergenic | 50.0% | |
| ! | TTTGGTCGGCTCAAGTGTCT+AGG | + | chr1_3:28834470-28834489 | Msa0113130:intron | 50.0% |
| ! | TTGGTCGGCTCAAGTGTCTA+GGG | + | chr1_3:28834471-28834490 | Msa0113130:intron | 50.0% |
| AGGGAGGGGAAGACTTTGAA+AGG | + | chr1_3:28834839-28834858 | Msa0113130:intron | 50.0% | |
| !! | GTTCGAGATTTTTGGAGGGG+AGG | - | chr1_3:28835523-28835542 | None:intergenic | 50.0% |
| GTCTCACCCTTACCTGGTAT+TGG | - | chr1_3:28836351-28836370 | None:intergenic | 50.0% | |
| GCGAGCGATGAATGTCAGTA+CGG | - | chr1_3:28836615-28836634 | None:intergenic | 50.0% | |
| ATCACTCGCAACTGTGAGCT+AGG | + | chr1_3:28836697-28836716 | Msa0113130:intron | 50.0% | |
| CAAACTACGTTGGGGGCTTT+AGG | + | chr1_3:28837201-28837220 | Msa0113130:intron | 50.0% | |
| CAAGTGAGCATAAAGCTGCC+GGG | - | chr1_3:28837227-28837246 | None:intergenic | 50.0% | |
| CCTGCAAGTTACCCATACGA+AGG | - | chr1_3:28840035-28840054 | None:intergenic | 50.0% | |
| ! | CCTTCGTATGGGTAACTTGC+AGG | + | chr1_3:28837610-28837629 | Msa0113130:intron | 50.0% |
| ! | TGCTCTGATACGTAACGGGA+TGG | + | chr1_3:28837681-28837700 | Msa0113130:intron | 50.0% |
| ! | GCTCTGATACGTAACGGGAT+GGG | + | chr1_3:28837682-28837701 | Msa0113130:intron | 50.0% |
| ! | CTCTGATACGTAACGGGATG+GGG | + | chr1_3:28837683-28837702 | Msa0113130:intron | 50.0% |
| CTCTGTTGAAATGGCACCAC+CGG | + | chr1_3:28838582-28838601 | Msa0113130:intron | 50.0% | |
| CCACATAGATGTTTCACCGG+TGG | - | chr1_3:28838601-28838620 | None:intergenic | 50.0% | |
| CCACCGGTGAAACATCTATG+TGG | + | chr1_3:28838598-28838617 | Msa0113130:intron | 50.0% | |
| TTCGACAGGAATCTGCAGGT+AGG | - | chr1_3:28838654-28838673 | None:intergenic | 50.0% | |
| CGTAAGGTTTAGGCCGATGA+GGG | - | chr1_3:28838688-28838707 | None:intergenic | 50.0% | |
| TCGTAAGGTTTAGGCCGATG+AGG | - | chr1_3:28838689-28838708 | None:intergenic | 50.0% | |
| TCATCGGCCTAAACCTTACG+AGG | + | chr1_3:28838688-28838707 | Msa0113130:intron | 50.0% | |
| GGAGTGTAGTAAGCCTCGTA+AGG | - | chr1_3:28838704-28838723 | None:intergenic | 50.0% | |
| !! | CTACAAGAGCGCTAGAGAGA+AGG | - | chr1_3:28838740-28838759 | None:intergenic | 50.0% |
| GATAGAGGGAGATAGTCGAG+CGG | - | chr1_3:28838772-28838791 | None:intergenic | 50.0% | |
| ! | GCTCTGATACGTAACGGGAT+GGG | - | chr1_3:28837682-28837701 | None:intergenic | 50.0% |
| ! | TGCTCTGATACGTAACGGGA+TGG | - | chr1_3:28837681-28837700 | None:intergenic | 50.0% |
| ! | GGAAAACGGGGTGTTACAAG+TGG | - | chr1_3:28839666-28839685 | None:intergenic | 50.0% |
| ! | AGATTAGTTGCGGTCGTGAG+TGG | - | chr1_3:28840009-28840028 | None:intergenic | 50.0% |
| CTCACGACCGCAACTAATCT+TGG | + | chr1_3:28840009-28840028 | Msa0113130:intron | 50.0% | |
| TGAGGGCTTATGCCCTAGAA+TGG | - | chr1_3:28840749-28840768 | None:intergenic | 50.0% | |
| ACGATGAGGGCTTATTCCCT+AGG | - | chr1_3:28840795-28840814 | None:intergenic | 50.0% | |
| GAATAAGCCCTCATCGTCGT+GGG | + | chr1_3:28840798-28840817 | Msa0113130:intron | 50.0% | |
| TGCTAAACCCACGACGATGA+GGG | - | chr1_3:28840808-28840827 | None:intergenic | 50.0% | |
| TTGCTAAACCCACGACGATG+AGG | - | chr1_3:28840809-28840828 | None:intergenic | 50.0% | |
| TGAATCTCACCCCTTCTGCT+TGG | - | chr1_3:28842939-28842958 | None:intergenic | 50.0% | |
| ! | GCTTTTGCTCAATAGCGACG+AGG | - | chr1_3:28843221-28843240 | None:intergenic | 50.0% |
| TCACGTCAAACCAAAGCCAC+TGG | + | chr1_3:28843742-28843761 | Msa0113130:intron | 50.0% | |
| ACCCAAGGCCAATTCTGTAC+CGG | + | chr1_3:28843801-28843820 | Msa0113130:intron | 50.0% | |
| !! | ACCGGTACAGAATTGGCCTT+GGG | - | chr1_3:28843805-28843824 | None:intergenic | 50.0% |
| !! | ATGAGGCTTTGGGGCAGAAT+TGG | - | chr1_3:28844687-28844706 | None:intergenic | 50.0% |
| CACCACTCCTCCTCATCATT+GGG | + | chr1_3:28845208-28845227 | Msa0113130:intron | 50.0% | |
| TTCCCAATGATGAGGAGGAG+TGG | - | chr1_3:28845213-28845232 | None:intergenic | 50.0% | |
| CCTGTAGGGAAAAGCAAACG+CGG | + | chr1_3:28845238-28845257 | Msa0113130:intron | 50.0% | |
| TCCAATCTGCAGGAGGAGAA+GGG | - | chr1_3:28845432-28845451 | None:intergenic | 50.0% | |
| TTCCAATCTGCAGGAGGAGA+AGG | - | chr1_3:28845433-28845452 | None:intergenic | 50.0% | |
| CCATTCCAGTCACCCTGTTA+AGG | - | chr1_3:28846115-28846134 | None:intergenic | 50.0% | |
| CCTTAACAGGGTGACTGGAA+TGG | + | chr1_3:28846112-28846131 | Msa0113130:intron | 50.0% | |
| TCCTGAAGATTCGGACTTCG+TGG | + | chr1_3:28848969-28848988 | Msa0113130:CDS | 50.0% | |
| ACCACGAAGTCCGAATCTTC+AGG | - | chr1_3:28848973-28848992 | None:intergenic | 50.0% | |
| GTATCGGAATAGCCAAGCTG+TGG | + | chr1_3:28848991-28849010 | Msa0113130:CDS | 50.0% | |
| GACCTTCGAGGTCGATGAAG+CGG | + | chr1_3:28830511-28830530 | Msa0113130:CDS | 55.0% | |
| AACCGCTTCATCGACCTCGA+AGG | - | chr1_3:28830516-28830535 | None:intergenic | 55.0% | |
| GGTCGATGAAGCGGTTGCTT+TGG | + | chr1_3:28830520-28830539 | Msa0113130:CDS | 55.0% | |
| ! | GAAGATGATTGCGCCGACAG+TGG | + | chr1_3:28830569-28830588 | Msa0113130:CDS | 55.0% |
| GGGAAGAGGGATTCCACTGT+CGG | - | chr1_3:28830585-28830604 | None:intergenic | 55.0% | |
| CACCTTCGCCAAGATCTTGC+TGG | - | chr1_3:28830615-28830634 | None:intergenic | 55.0% | |
| GCACCTCAGAGTGTGCAGTT+GGG | + | chr1_3:28831119-28831138 | Msa0113130:intron | 55.0% | |
| CGCCTTTAGATGTGCCGGAA+TGG | + | chr1_3:28831510-28831529 | Msa0113130:intron | 55.0% | |
| TTCAGTAGCTCAGTTGGCGG+AGG | + | chr1_3:28831661-28831680 | Msa0113130:intron | 55.0% | |
| GGTCACCCTCTTGAAACTCG+AGG | - | chr1_3:28832162-28832181 | None:intergenic | 55.0% | |
| AGTCACTCCTATGACCGGTG+TGG | + | chr1_3:28832195-28832214 | Msa0113130:intron | 55.0% | |
| GTCACTCCTATGACCGGTGT+GGG | + | chr1_3:28832196-28832215 | Msa0113130:intron | 55.0% | |
| CTTCAAACCACGACCCACAC+CGG | - | chr1_3:28832212-28832231 | None:intergenic | 55.0% | |
| CCCCAAACAACCCTCACTAG+AGG | - | chr1_3:28832496-28832515 | None:intergenic | 55.0% | |
| CTAGTGAGGGTTGTTTGGGG+AGG | + | chr1_3:28832496-28832515 | Msa0113130:intron | 55.0% | |
| GTTGTTTGGGGAGGAGCAAC+TGG | + | chr1_3:28832505-28832524 | Msa0113130:intron | 55.0% | |
| ! | CAGAATTCGGGGCCCGATTT+TGG | - | chr1_3:28833378-28833397 | None:intergenic | 55.0% |
| AGGAAATCGGGGCCCGATTT+CGG | - | chr1_3:28833447-28833466 | None:intergenic | 55.0% | |
| !! | TCGAGTTGTCGGTGTCGTTG+TGG | + | chr1_3:28834224-28834243 | Msa0113130:intron | 55.0% |
| CGTATATGTTGCCTCGACCG+TGG | + | chr1_3:28834418-28834437 | Msa0113130:intron | 55.0% | |
| ! | GGAGAACGGGGTGTTACAGA+GGG | + | chr1_3:28834820-28834839 | Msa0113130:intron | 55.0% |
| ! | AACGGGGTGTTACAGAGGGA+GGG | + | chr1_3:28834824-28834843 | Msa0113130:intron | 55.0% |
| ACGGAGATAAACTGTGGGCG+AGG | + | chr1_3:28835334-28835353 | Msa0113130:intron | 55.0% | |
| !! | AAAGATGGGGGCTTTAGGCC+CGG | + | chr1_3:28837166-28837185 | Msa0113130:intron | 55.0% |
| !! | AGACTAGAGGCGTTCGTGAG+TGG | + | chr1_3:28837639-28837658 | Msa0113130:intron | 55.0% |
| !! | CTTGGCACGCAGGCCTTATT+AGG | - | chr1_3:28837777-28837796 | None:intergenic | 55.0% |
| GGGAGGGTGGAAATTTCGAC+AGG | - | chr1_3:28838668-28838687 | None:intergenic | 55.0% | |
| AGGTTTAGGCCGATGAGGGA+GGG | - | chr1_3:28838684-28838703 | None:intergenic | 55.0% | |
| AAGGTTTAGGCCGATGAGGG+AGG | - | chr1_3:28838685-28838704 | None:intergenic | 55.0% | |
| !! | AAGAGCGCTAGAGAGAAGGC+AGG | - | chr1_3:28838736-28838755 | None:intergenic | 55.0% |
| TCTACACACATGCCGCCTGT+GGG | + | chr1_3:28838852-28838871 | Msa0113130:intron | 55.0% | |
| GGAATAAGCCCTCATCGTCG+TGG | + | chr1_3:28840797-28840816 | Msa0113130:intron | 55.0% | |
| CGAGGGCTTATGCCCTAGAA+TGG | - | chr1_3:28843161-28843180 | None:intergenic | 55.0% | |
| AAGATGAGGGCTCATGCCCT+AGG | - | chr1_3:28843245-28843264 | None:intergenic | 55.0% | |
| ! | GACCGGTACAGAATTGGCCT+TGG | - | chr1_3:28843806-28843825 | None:intergenic | 55.0% |
| GCACCACTCCTCCTCATCAT+TGG | + | chr1_3:28845207-28845226 | Msa0113130:intron | 55.0% | |
| !! | CCGCGTTTGCTTTTCCCTAC+AGG | - | chr1_3:28845241-28845260 | None:intergenic | 55.0% |
| GTAGGGAAAAGCAAACGCGG+TGG | + | chr1_3:28845241-28845260 | Msa0113130:intron | 55.0% | |
| ACCCTTCTCCTCCTGCAGAT+TGG | + | chr1_3:28845428-28845447 | Msa0113130:intron | 55.0% | |
| GGCAAAGCTAGAGTGGCTCA+TGG | + | chr1_3:28847629-28847648 | Msa0113130:CDS | 55.0% | |
| GGTTCATTGCCAGCCCTATG+TGG | + | chr1_3:28848808-28848827 | Msa0113130:intron | 55.0% | |
| ! | CATGCGCTTGCTGCCACATA+GGG | - | chr1_3:28848824-28848843 | None:intergenic | 55.0% |
| ! | ACATGCGCTTGCTGCCACAT+AGG | - | chr1_3:28848825-28848844 | None:intergenic | 55.0% |
| TATGTGGCAGCAAGCGCATG+TGG | + | chr1_3:28848824-28848843 | Msa0113130:intron | 55.0% | |
| TTCCGACGGTGAGACCTTCG+AGG | + | chr1_3:28830499-28830518 | Msa0113130:CDS | 60.0% | |
| GACCTCGAAGGTCTCACCGT+CGG | - | chr1_3:28830504-28830523 | None:intergenic | 60.0% | |
| GGCACCTCAGAGTGTGCAGT+TGG | + | chr1_3:28831118-28831137 | Msa0113130:intron | 60.0% | |
| GGGCCCCGAACTGCCAAAAT+CGG | + | chr1_3:28833362-28833381 | Msa0113130:intron | 60.0% | |
| GGCCCCGAACTGCCAAAATC+GGG | + | chr1_3:28833363-28833382 | Msa0113130:intron | 60.0% | |
| !! | GGCCCGATTTTGGCAGTTCG+GGG | - | chr1_3:28833368-28833387 | None:intergenic | 60.0% |
| !! | GGGCCCGATTTTGGCAGTTC+GGG | - | chr1_3:28833369-28833388 | None:intergenic | 60.0% |
| !! | GGGGCCCGATTTTGGCAGTT+CGG | - | chr1_3:28833370-28833389 | None:intergenic | 60.0% |
| TCTGTTGGGGGCTTATGCCC+TGG | + | chr1_3:28833997-28834016 | Msa0113130:intron | 60.0% | |
| CTGTTGGGGGCTTATGCCCT+GGG | + | chr1_3:28833998-28834017 | Msa0113130:intron | 60.0% | |
| CTGCACATTACCCACGGTCG+AGG | - | chr1_3:28834432-28834451 | None:intergenic | 60.0% | |
| CTCGACCGTGGGTAATGTGC+AGG | + | chr1_3:28834430-28834449 | Msa0113130:intron | 60.0% | |
| ! | GGGAGAACGGGGTGTTACAG+AGG | + | chr1_3:28834819-28834838 | Msa0113130:intron | 60.0% |
| ! | GAACGGGGTGTTACAGAGGG+AGG | + | chr1_3:28834823-28834842 | Msa0113130:intron | 60.0% |
| ! | ACGGGGTGTTACAGAGGGAG+GGG | + | chr1_3:28834825-28834844 | Msa0113130:intron | 60.0% |
| GCGAGTGATGTTGCTCGCAG+TGG | - | chr1_3:28836686-28836705 | None:intergenic | 60.0% | |
| ACTCGCAGTGGCGAGCTCAA+TGG | - | chr1_3:28836723-28836742 | None:intergenic | 60.0% | |
| ! | GCGAGTGGTTCTACTCGCAG+TGG | - | chr1_3:28836735-28836754 | None:intergenic | 60.0% |
| GGTCAACTCGCAATGGCGAG+TGG | - | chr1_3:28836750-28836769 | None:intergenic | 60.0% | |
| !! | TACGTTGGGGGCTTTAGGCC+CGG | + | chr1_3:28837206-28837225 | Msa0113130:intron | 60.0% |
| TTTAGGCCGATGAGGGAGGG+TGG | - | chr1_3:28838681-28838700 | None:intergenic | 60.0% | |
| GTCTACACACATGCCGCCTG+TGG | + | chr1_3:28838851-28838870 | Msa0113130:intron | 60.0% | |
| CTACACACATGCCGCCTGTG+GGG | + | chr1_3:28838853-28838872 | Msa0113130:intron | 60.0% | |
| AAGACGAGGGCTCATGCCCT+AGG | - | chr1_3:28843283-28843302 | None:intergenic | 60.0% | |
| AGCAAGCGCATGTGGCCTAG+TGG | + | chr1_3:28848832-28848851 | Msa0113130:intron | 60.0% | |
| GCAAGCGCATGTGGCCTAGT+GGG | + | chr1_3:28848833-28848852 | Msa0113130:intron | 60.0% | |
| CCACGACCCACACCGGTCAT+AGG | - | chr1_3:28832205-28832224 | None:intergenic | 65.0% | |
| CCTATGACCGGTGTGGGTCG+TGG | + | chr1_3:28832202-28832221 | Msa0113130:intron | 65.0% | |
| ! | GGCAGTTCGGGGCCCGATTT+TGG | - | chr1_3:28833357-28833376 | None:intergenic | 65.0% |
| GGGCCCCGAACTGCCGAAAT+CGG | + | chr1_3:28833431-28833450 | Msa0113130:intron | 65.0% | |
| GGCCCCGAACTGCCGAAATC+GGG | + | chr1_3:28833432-28833451 | Msa0113130:intron | 65.0% | |
| GGCCCGATTTCGGCAGTTCG+GGG | - | chr1_3:28833437-28833456 | None:intergenic | 65.0% | |
| GGGCCCGATTTCGGCAGTTC+GGG | - | chr1_3:28833438-28833457 | None:intergenic | 65.0% | |
| GGGGCCCGATTTCGGCAGTT+CGG | - | chr1_3:28833439-28833458 | None:intergenic | 65.0% | |
| CCAGGGCATAAGCCCCCAAC+AGG | - | chr1_3:28834000-28834019 | None:intergenic | 65.0% | |
| CCTGTTGGGGGCTTATGCCC+TGG | + | chr1_3:28834035-28834054 | Msa0113130:intron | 65.0% | |
| TGCTCGCAGTGGCGAGCGAT+GGG | - | chr1_3:28836675-28836694 | None:intergenic | 65.0% | |
| TTGCTCGCAGTGGCGAGCGA+TGG | - | chr1_3:28836676-28836695 | None:intergenic | 65.0% | |
| CAGGTCGGTCCATCCGACCT+AGG | - | chr1_3:28838898-28838917 | None:intergenic | 65.0% | |
| GCGACGAGGGCTCATACCCT+AGG | - | chr1_3:28843207-28843226 | None:intergenic | 65.0% | |
| ! | CGCTTGCTGCCACATAGGGC+TGG | - | chr1_3:28848820-28848839 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 28830464 | 28849060 | 28830464 | ID=Msa0113130;Name=Msa0113130 |
| chr1_3 | mRNA | 28830464 | 28849060 | 28830464 | ID=Msa0113130-mRNA-1;Parent=Msa0113130;Name=Msa0113130-mRNA-1;_AED=0.56;_eAED=0.56;_QI=0|0|0|0.2|1|1|5|0|217 |
| chr1_3 | exon | 28830464 | 28830717 | 28830464 | ID=Msa0113130-mRNA-1:exon:9540;Parent=Msa0113130-mRNA-1 |
| chr1_3 | exon | 28845981 | 28846038 | 28845981 | ID=Msa0113130-mRNA-1:exon:9541;Parent=Msa0113130-mRNA-1 |
| chr1_3 | exon | 28847605 | 28847746 | 28847605 | ID=Msa0113130-mRNA-1:exon:9542;Parent=Msa0113130-mRNA-1 |
| chr1_3 | exon | 28847892 | 28847989 | 28847892 | ID=Msa0113130-mRNA-1:exon:9543;Parent=Msa0113130-mRNA-1 |
| chr1_3 | exon | 28848959 | 28849060 | 28848959 | ID=Msa0113130-mRNA-1:exon:9544;Parent=Msa0113130-mRNA-1 |
| chr1_3 | CDS | 28830464 | 28830717 | 28830464 | ID=Msa0113130-mRNA-1:cds;Parent=Msa0113130-mRNA-1 |
| chr1_3 | CDS | 28845981 | 28846038 | 28845981 | ID=Msa0113130-mRNA-1:cds;Parent=Msa0113130-mRNA-1 |
| chr1_3 | CDS | 28847605 | 28847746 | 28847605 | ID=Msa0113130-mRNA-1:cds;Parent=Msa0113130-mRNA-1 |
| chr1_3 | CDS | 28847892 | 28847989 | 28847892 | ID=Msa0113130-mRNA-1:cds;Parent=Msa0113130-mRNA-1 |
| chr1_3 | CDS | 28848959 | 28849060 | 28848959 | ID=Msa0113130-mRNA-1:cds;Parent=Msa0113130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
