Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077010 | sp|Q93VI4|PABN1_ARATH | 78.804 | 184 | 37 | 2 | 35 | 217 | 45 | 227 | 8.45e-102 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077010 | B7FL26 | 100.000 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 4.25e-159 | 447 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0077010 | 0.811556 | 6.598146e-51 | -8.615850e-47 |
| Msa0006880 | Msa0077010 | 0.873288 | 1.651180e-67 | -8.615850e-47 |
| Msa0007850 | Msa0077010 | 0.863845 | 1.860774e-64 | -8.615850e-47 |
| Msa0026660 | Msa0077010 | 0.808036 | 3.772261e-50 | -8.615850e-47 |
| Msa0027580 | Msa0077010 | 0.868618 | 5.709316e-66 | -8.615850e-47 |
| Msa0029260 | Msa0077010 | 0.842283 | 2.841941e-58 | -8.615850e-47 |
| Msa0033880 | Msa0077010 | 0.876357 | 1.489642e-68 | -8.615850e-47 |
| Msa0042280 | Msa0077010 | 0.819971 | 8.776434e-53 | -8.615850e-47 |
| Msa0043860 | Msa0077010 | 0.825507 | 4.513310e-54 | -8.615850e-47 |
| Msa0047160 | Msa0077010 | 0.805434 | 1.337292e-49 | -8.615850e-47 |
| Msa0047820 | Msa0077010 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
| Msa0055100 | Msa0077010 | 0.854816 | 9.565705e-62 | -8.615850e-47 |
| Msa0055150 | Msa0077010 | 0.835492 | 1.625829e-56 | -8.615850e-47 |
| Msa0056270 | Msa0077010 | 0.845476 | 3.966098e-59 | -8.615850e-47 |
| Msa0057140 | Msa0077010 | 0.806740 | 7.102578e-50 | -8.615850e-47 |
| Msa0057610 | Msa0077010 | 0.808623 | 2.827861e-50 | -8.615850e-47 |
| Msa0061970 | Msa0077010 | 0.831575 | 1.544192e-55 | -8.615850e-47 |
| Msa0068000 | Msa0077010 | 0.843200 | 1.621676e-58 | -8.615850e-47 |
| Msa0068020 | Msa0077010 | 0.854293 | 1.355189e-61 | -8.615850e-47 |
| Msa0075340 | Msa0077010 | 0.868631 | 5.656055e-66 | -8.615850e-47 |
| Msa0076040 | Msa0077010 | 0.807158 | 5.794665e-50 | -8.615850e-47 |
| Msa0076780 | Msa0077010 | 0.825334 | 4.961565e-54 | -8.615850e-47 |
| Msa0077010 | Msa0077900 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0077010 | Msa0082280 | 0.801759 | 7.737776e-49 | -8.615850e-47 |
| Msa0077010 | Msa0097600 | 0.848880 | 4.621883e-60 | -8.615850e-47 |
| Msa0077010 | Msa0097950 | 0.810000 | 1.432943e-50 | -8.615850e-47 |
| Msa0077010 | Msa0100800 | 0.808389 | 3.172844e-50 | -8.615850e-47 |
| Msa0077010 | Msa0101180 | 0.855991 | 4.349375e-62 | -8.615850e-47 |
| Msa0077010 | Msa0108550 | 0.829662 | 4.540333e-55 | -8.615850e-47 |
| Msa0077010 | Msa0108870 | 0.830496 | 2.842363e-55 | -8.615850e-47 |
| Msa0077010 | Msa0113130 | 0.844523 | 7.174219e-59 | -8.615850e-47 |
| Msa0077010 | Msa0113240 | 0.871496 | 6.536860e-67 | -8.615850e-47 |
| Msa0077010 | Msa0115370 | 0.852217 | 5.337400e-61 | -8.615850e-47 |
| Msa0077010 | Msa0116130 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0077010 | Msa0118710 | 0.820109 | 8.158522e-53 | -8.615850e-47 |
| Msa0077010 | Msa0121820 | 0.831628 | 1.498535e-55 | -8.615850e-47 |
| Msa0077010 | Msa0124690 | 0.813810 | 2.120259e-51 | -8.615850e-47 |
| Msa0077010 | Msa0126770 | 0.832021 | 1.198664e-55 | -8.615850e-47 |
| Msa0077010 | Msa0126840 | 0.885102 | 1.085493e-71 | -8.615850e-47 |
| Msa0077010 | Msa0126880 | 0.824176 | 9.301174e-54 | -8.615850e-47 |
| Msa0077010 | Msa0127040 | 0.885554 | 7.354299e-72 | -8.615850e-47 |
| Msa0077010 | Msa0127850 | 0.874518 | 6.345263e-68 | -8.615850e-47 |
| Msa0077010 | Msa0131450 | 0.818783 | 1.636877e-52 | -8.615850e-47 |
| Msa0077010 | Msa0138160 | 0.819573 | 1.082059e-52 | -8.615850e-47 |
| Msa0077010 | Msa0142110 | 0.830016 | 3.722905e-55 | -8.615850e-47 |
| Msa0077010 | Msa0147750 | 0.810429 | 1.157769e-50 | -8.615850e-47 |
| Msa0077010 | Msa0155430 | 0.819597 | 1.068538e-52 | -8.615850e-47 |
| Msa0077010 | Msa0163760 | 0.806390 | 8.419851e-50 | -8.615850e-47 |
| Msa0077010 | Msa0165440 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
| Msa0077010 | Msa0165950 | 0.858470 | 8.058796e-63 | -8.615850e-47 |
| Msa0077010 | Msa0166750 | 0.899184 | 2.546871e-77 | -8.615850e-47 |
| Msa0077010 | Msa0167480 | 0.879718 | 9.911622e-70 | -8.615850e-47 |
| Msa0077010 | Msa0167870 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa0077010 | Msa0169300 | 0.837670 | 4.532882e-57 | -8.615850e-47 |
| Msa0077010 | Msa0171850 | 0.813904 | 2.021225e-51 | -8.615850e-47 |
| Msa0077010 | Msa0171940 | 0.851793 | 7.039058e-61 | -8.615850e-47 |
| Msa0077010 | Msa0174000 | 0.873517 | 1.383564e-67 | -8.615850e-47 |
| Msa0077010 | Msa0174770 | 0.835454 | 1.661988e-56 | -8.615850e-47 |
| Msa0077010 | Msa0175200 | 0.809580 | 1.763721e-50 | -8.615850e-47 |
| Msa0077010 | Msa0177270 | 0.812607 | 3.894452e-51 | -8.615850e-47 |
| Msa0077010 | Msa0181610 | 0.816222 | 6.179716e-52 | -8.615850e-47 |
| Msa0077010 | Msa0182280 | 0.819364 | 1.207455e-52 | -8.615850e-47 |
| Msa0077010 | Msa0183460 | 0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0077010 | Msa0193600 | 0.820923 | 5.307071e-53 | -8.615850e-47 |
| Msa0077010 | Msa0199690 | 0.842284 | 2.841482e-58 | -8.615850e-47 |
| Msa0077010 | Msa0211840 | 0.825279 | 5.110837e-54 | -8.615850e-47 |
| Msa0077010 | Msa0221030 | 0.862064 | 6.600376e-64 | -8.615850e-47 |
| Msa0077010 | Msa0221600 | 0.819500 | 1.124357e-52 | -8.615850e-47 |
| Msa0077010 | Msa0224560 | 0.844759 | 6.194537e-59 | -8.615850e-47 |
| Msa0077010 | Msa0226460 | 0.805313 | 1.417947e-49 | -8.615850e-47 |
| Msa0077010 | Msa0231100 | 0.846992 | 1.532304e-59 | -8.615850e-47 |
| Msa0077010 | Msa0231660 | 0.800104 | 1.685777e-48 | -8.615850e-47 |
| Msa0077010 | Msa0231710 | 0.808233 | 3.425755e-50 | -8.615850e-47 |
| Msa0077010 | Msa0232550 | 0.810482 | 1.127734e-50 | -8.615850e-47 |
| Msa0077010 | Msa0245060 | 0.836211 | 1.068535e-56 | -8.615850e-47 |
| Msa0077010 | Msa0245430 | 0.825894 | 3.654536e-54 | -8.615850e-47 |
| Msa0077010 | Msa0248460 | 0.808089 | 3.675703e-50 | -8.615850e-47 |
| Msa0077010 | Msa0252240 | 0.800559 | 1.361396e-48 | -8.615850e-47 |
| Msa0077010 | Msa0262480 | 0.851875 | 6.672580e-61 | -8.615850e-47 |
| Msa0077010 | Msa0263380 | 0.804762 | 1.848612e-49 | -8.615850e-47 |
| Msa0077010 | Msa0273650 | 0.823466 | 1.364597e-53 | -8.615850e-47 |
| Msa0077010 | Msa0275360 | 0.825222 | 5.273842e-54 | -8.615850e-47 |
| Msa0077010 | Msa0280430 | 0.882454 | 1.028163e-70 | -8.615850e-47 |
| Msa0077010 | Msa0291520 | 0.874828 | 4.978544e-68 | -8.615850e-47 |
| Msa0077010 | Msa0296250 | 0.812405 | 4.310158e-51 | -8.615850e-47 |
| Msa0077010 | Msa0296920 | 0.815694 | 8.109185e-52 | -8.615850e-47 |
| Msa0077010 | Msa0299520 | 0.808857 | 2.519922e-50 | -8.615850e-47 |
| Msa0077010 | Msa0300350 | 0.851011 | 1.171275e-60 | -8.615850e-47 |
| Msa0077010 | Msa0304590 | 0.830919 | 2.238795e-55 | -8.615850e-47 |
| Msa0077010 | Msa0304660 | 0.847662 | 1.003269e-59 | -8.615850e-47 |
| Msa0077010 | Msa0308220 | 0.814644 | 1.386788e-51 | -8.615850e-47 |
| Msa0077010 | Msa0322090 | 0.818882 | 1.554684e-52 | -8.615850e-47 |
| Msa0077010 | Msa0331700 | 0.846679 | 1.866932e-59 | -8.615850e-47 |
| Msa0077010 | Msa0339760 | 0.804407 | 2.192888e-49 | -8.615850e-47 |
| Msa0077010 | Msa0348830 | 0.815806 | 7.655814e-52 | -8.615850e-47 |
| Msa0077010 | Msa0358770 | 0.852827 | 3.574249e-61 | -8.615850e-47 |
| Msa0077010 | Msa0359600 | 0.833965 | 3.939245e-56 | -8.615850e-47 |
| Msa0077010 | Msa0370160 | -0.809250 | 2.076068e-50 | -8.615850e-47 |
| Msa0077010 | Msa0376690 | 0.818345 | 2.057843e-52 | -8.615850e-47 |
| Msa0077010 | Msa0376820 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa0077010 | Msa0384670 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa0077010 | Msa0384880 | 0.850316 | 1.837256e-60 | -8.615850e-47 |
| Msa0077010 | Msa0387470 | 0.809821 | 1.565917e-50 | -8.615850e-47 |
| Msa0077010 | Msa0387910 | 0.812992 | 3.206700e-51 | -8.615850e-47 |
| Msa0077010 | Msa0389510 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
| Msa0077010 | Msa0392940 | 0.828090 | 1.090347e-54 | -8.615850e-47 |
| Msa0077010 | Msa0394400 | 0.809701 | 1.661530e-50 | -8.615850e-47 |
| Msa0077010 | Msa0403190 | 0.818971 | 1.483803e-52 | -8.615850e-47 |
| Msa0077010 | Msa0413530 | 0.809099 | 2.236806e-50 | -8.615850e-47 |
| Msa0077010 | Msa0419520 | 0.822139 | 2.778512e-53 | -8.615850e-47 |
| Msa0077010 | Msa0421260 | 0.818297 | 2.109841e-52 | -8.615850e-47 |
| Msa0077010 | Msa0423750 | 0.813495 | 2.487305e-51 | -8.615850e-47 |
| Msa0077010 | Msa0427860 | -0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0077010 | Msa0436200 | 0.817468 | 3.246400e-52 | -8.615850e-47 |
| Msa0077010 | Msa0437690 | -0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0077010 | Msa0443390 | 0.838830 | 2.277911e-57 | -8.615850e-47 |
| Msa0077010 | Msa0450930 | 0.807699 | 4.450179e-50 | -8.615850e-47 |
| Msa0077010 | Msa0458060 | 0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0077010 | Msa0458640 | 0.832590 | 8.665021e-56 | -8.615850e-47 |
| Msa0077010 | Msa0465550 | 0.829774 | 4.263887e-55 | -8.615850e-47 |
| Msa0077010 | Msa0474090 | -0.823282 | 1.506521e-53 | -8.615850e-47 |
| Msa0077010 | Msa0474700 | 0.838036 | 3.649290e-57 | -8.615850e-47 |
| Msa0077010 | Msa0478580 | 0.804975 | 1.669025e-49 | -8.615850e-47 |
| Msa0077010 | Msa0479330 | 0.830213 | 3.333788e-55 | -8.615850e-47 |
| Msa0077010 | Msa0481810 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0077010 | Msa0484740 | 0.814639 | 1.390355e-51 | -8.615850e-47 |
| Msa0077010 | Msa0488590 | 0.800849 | 1.188234e-48 | -8.615850e-47 |
| Msa0077010 | Msa0490820 | 0.873883 | 1.040670e-67 | -8.615850e-47 |
| Msa0077010 | Msa0511490 | 0.802144 | 6.447971e-49 | -8.615850e-47 |
| Msa0077010 | Msa0513440 | 0.807891 | 4.049659e-50 | -8.615850e-47 |
| Msa0077010 | Msa0514180 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0077010 | Msa0523680 | 0.814647 | 1.384827e-51 | -8.615850e-47 |
| Msa0077010 | Msa0524590 | 0.802479 | 5.501044e-49 | -8.615850e-47 |
| Msa0077010 | Msa0526540 | 0.809496 | 1.838872e-50 | -8.615850e-47 |
| Msa0077010 | Msa0527910 | 0.830229 | 3.303238e-55 | -8.615850e-47 |
| Msa0077010 | Msa0531650 | 0.807463 | 4.993163e-50 | -8.615850e-47 |
| Msa0077010 | Msa0534750 | 0.882062 | 1.427129e-70 | -8.615850e-47 |
| Msa0077010 | Msa0550540 | 0.820568 | 6.404667e-53 | -8.615850e-47 |
| Msa0077010 | Msa0550570 | 0.853169 | 2.854028e-61 | -8.615850e-47 |
| Msa0077010 | Msa0556790 | 0.826133 | 3.206016e-54 | -8.615850e-47 |
| Msa0077010 | Msa0561430 | 0.828253 | 9.960852e-55 | -8.615850e-47 |
| Msa0077010 | Msa0563470 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
| Msa0077010 | Msa0571920 | 0.808137 | 3.590448e-50 | -8.615850e-47 |
| Msa0077010 | Msa0576940 | 0.812316 | 4.508395e-51 | -8.615850e-47 |
| Msa0077010 | Msa0580230 | 0.818189 | 2.232361e-52 | -8.615850e-47 |
| Msa0077010 | Msa0580950 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0077010 | Msa0581070 | 0.809828 | 1.560183e-50 | -8.615850e-47 |
| Msa0077010 | Msa0581130 | 0.815373 | 9.559299e-52 | -8.615850e-47 |
| Msa0077010 | Msa0590940 | 0.823098 | 1.663016e-53 | -8.615850e-47 |
| Msa0077010 | Msa0593700 | 0.868380 | 6.814554e-66 | -8.615850e-47 |
| Msa0077010 | Msa0603670 | 0.815234 | 1.026209e-51 | -8.615850e-47 |
| Msa0077010 | Msa0603750 | 0.855252 | 7.147568e-62 | -8.615850e-47 |
| Msa0077010 | Msa0607510 | 0.810773 | 9.757158e-51 | -8.615850e-47 |
| Msa0077010 | Msa0607690 | 0.804517 | 2.079605e-49 | -8.615850e-47 |
| Msa0077010 | Msa0609000 | 0.858053 | 1.072630e-62 | -8.615850e-47 |
| Msa0077010 | Msa0610390 | 0.834683 | 2.600831e-56 | -8.615850e-47 |
| Msa0077010 | Msa0615580 | 0.822992 | 1.760225e-53 | -8.615850e-47 |
| Msa0077010 | Msa0618930 | 0.864508 | 1.156293e-64 | -8.615850e-47 |
| Msa0077010 | Msa0619920 | 0.820837 | 5.553389e-53 | -8.615850e-47 |
| Msa0077010 | Msa0626940 | 0.814870 | 1.236117e-51 | -8.615850e-47 |
| Msa0077010 | Msa0631350 | 0.817685 | 2.901513e-52 | -8.615850e-47 |
| Msa0077010 | Msa0633570 | 0.873119 | 1.882642e-67 | -8.615850e-47 |
| Msa0077010 | Msa0650920 | 0.813435 | 2.562909e-51 | -8.615850e-47 |
| Msa0077010 | Msa0652300 | 0.812440 | 4.234371e-51 | -8.615850e-47 |
| Msa0077010 | Msa0654870 | 0.824795 | 6.652261e-54 | -8.615850e-47 |
| Msa0077010 | Msa0656810 | 0.819385 | 1.194125e-52 | -8.615850e-47 |
| Msa0077010 | Msa0659030 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0077010 | Msa0659990 | 0.856577 | 2.928835e-62 | -8.615850e-47 |
| Msa0077010 | Msa0662630 | 0.818047 | 2.403447e-52 | -8.615850e-47 |
| Msa0077010 | Msa0666230 | 0.841054 | 5.995646e-58 | -8.615850e-47 |
| Msa0077010 | Msa0669720 | 0.800343 | 1.507133e-48 | -8.615850e-47 |
| Msa0077010 | Msa0669760 | 0.820294 | 7.399955e-53 | -8.615850e-47 |
| Msa0077010 | Msa0683780 | 0.854047 | 1.596775e-61 | -8.615850e-47 |
| Msa0077010 | Msa0687630 | 0.805505 | 1.292648e-49 | -8.615850e-47 |
| Msa0077010 | Msa0692940 | 0.825895 | 3.652021e-54 | -8.615850e-47 |
| Msa0077010 | Msa0693210 | 0.817221 | 3.689484e-52 | -8.615850e-47 |
| Msa0077010 | Msa0694840 | 0.827797 | 1.282837e-54 | -8.615850e-47 |
| Msa0077010 | Msa0699190 | 0.815504 | 8.938284e-52 | -8.615850e-47 |
| Msa0077010 | Msa0705000 | 0.834269 | 3.304064e-56 | -8.615850e-47 |
| Msa0077010 | Msa0705040 | 0.838084 | 3.547272e-57 | -8.615850e-47 |
| Msa0077010 | Msa0707390 | 0.810027 | 1.413390e-50 | -8.615850e-47 |
| Msa0077010 | Msa0719420 | 0.808464 | 3.058105e-50 | -8.615850e-47 |
| Msa0077010 | Msa0720030 | 0.842743 | 2.146452e-58 | -8.615850e-47 |
| Msa0077010 | Msa0724150 | 0.800972 | 1.121562e-48 | -8.615850e-47 |
| Msa0077010 | Msa0729200 | 0.852235 | 5.271760e-61 | -8.615850e-47 |
| Msa0077010 | Msa0733480 | 0.800313 | 1.528052e-48 | -8.615850e-47 |
| Msa0077010 | Msa0738100 | 0.818146 | 2.282716e-52 | -8.615850e-47 |
| Msa0077010 | Msa0744100 | 0.810060 | 1.390621e-50 | -8.615850e-47 |
| Msa0077010 | Msa0769590 | 0.857341 | 1.743286e-62 | -8.615850e-47 |
| Msa0077010 | Msa0774750 | 0.826063 | 3.331955e-54 | -8.615850e-47 |
| Msa0077010 | Msa0781270 | 0.805511 | 1.288653e-49 | -8.615850e-47 |
| Msa0077010 | Msa0785130 | 0.845608 | 3.651923e-59 | -8.615850e-47 |
| Msa0077010 | Msa0789680 | 0.806051 | 9.926032e-50 | -8.615850e-47 |
| Msa0077010 | Msa0793390 | 0.811032 | 8.575582e-51 | -8.615850e-47 |
| Msa0077010 | Msa0805500 | 0.867317 | 1.495985e-65 | -8.615850e-47 |
| Msa0077010 | Msa0806880 | 0.856407 | 3.285724e-62 | -8.615850e-47 |
| Msa0077010 | Msa0814250 | 0.808421 | 3.122627e-50 | -8.615850e-47 |
| Msa0077010 | Msa0817540 | 0.826341 | 2.860954e-54 | -8.615850e-47 |
| Msa0077010 | Msa0819060 | 0.803196 | 3.912327e-49 | -8.615850e-47 |
| Msa0077010 | Msa0819540 | 0.808866 | 2.509004e-50 | -8.615850e-47 |
| Msa0077010 | Msa0822170 | 0.806707 | 7.216603e-50 | -8.615850e-47 |
| Msa0077010 | Msa0822180 | 0.814660 | 1.376143e-51 | -8.615850e-47 |
| Msa0077010 | Msa0825270 | 0.828672 | 7.891635e-55 | -8.615850e-47 |
| Msa0077010 | Msa0828680 | 0.802459 | 5.553900e-49 | -8.615850e-47 |
| Msa0077010 | Msa0839200 | 0.853705 | 2.003223e-61 | -8.615850e-47 |
| Msa0077010 | Msa0858440 | 0.817303 | 3.536293e-52 | -8.615850e-47 |
| Msa0077010 | Msa0859180 | 0.811525 | 6.702633e-51 | -8.615850e-47 |
| Msa0077010 | Msa0869010 | 0.801470 | 8.868828e-49 | -8.615850e-47 |
| Msa0077010 | Msa0897400 | 0.803332 | 3.666753e-49 | -8.615850e-47 |
| Msa0077010 | Msa0901450 | 0.834050 | 3.749674e-56 | -8.615850e-47 |
| Msa0077010 | Msa0913240 | 0.841364 | 4.970235e-58 | -8.615850e-47 |
| Msa0077010 | Msa0921870 | 0.831213 | 1.895633e-55 | -8.615850e-47 |
| Msa0077010 | Msa0925770 | 0.825383 | 4.828873e-54 | -8.615850e-47 |
| Msa0077010 | Msa0933290 | 0.816774 | 4.650397e-52 | -8.615850e-47 |
| Msa0077010 | Msa0943170 | 0.835888 | 1.291046e-56 | -8.615850e-47 |
| Msa0077010 | Msa0945480 | 0.834229 | 3.381856e-56 | -8.615850e-47 |
| Msa0077010 | Msa0959910 | 0.816832 | 4.512248e-52 | -8.615850e-47 |
| Msa0077010 | Msa0960830 | 0.831786 | 1.370399e-55 | -8.615850e-47 |
| Msa0077010 | Msa0963020 | 0.875945 | 2.064514e-68 | -8.615850e-47 |
| Msa0077010 | Msa0968440 | 0.838650 | 2.535661e-57 | -8.615850e-47 |
| Msa0077010 | Msa0973320 | 0.801503 | 8.730812e-49 | -8.615850e-47 |
| Msa0077010 | Msa0981430 | 0.838944 | 2.127557e-57 | -8.615850e-47 |
| Msa0077010 | Msa0994290 | 0.820475 | 6.727149e-53 | -8.615850e-47 |
| Msa0077010 | Msa1001350 | 0.826915 | 2.087720e-54 | -8.615850e-47 |
| Msa0077010 | Msa1019240 | 0.838342 | 3.043651e-57 | -8.615850e-47 |
| Msa0077010 | Msa1019260 | 0.826100 | 3.264018e-54 | -8.615850e-47 |
| Msa0077010 | Msa1025940 | 0.866548 | 2.631648e-65 | -8.615850e-47 |
| Msa0077010 | Msa1029970 | 0.819443 | 1.158356e-52 | -8.615850e-47 |
| Msa0077010 | Msa1040800 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0077010 | Msa1070390 | 0.824885 | 6.333114e-54 | -8.615850e-47 |
| Msa0077010 | Msa1072710 | 0.841822 | 3.762899e-58 | -8.615850e-47 |
| Msa0077010 | Msa1073400 | 0.806057 | 9.893097e-50 | -8.615850e-47 |
| Msa0077010 | Msa1083880 | 0.880757 | 4.220180e-70 | -8.615850e-47 |
| Msa0077010 | Msa1089840 | 0.802366 | 5.804961e-49 | -8.615850e-47 |
| Msa0077010 | Msa1093330 | 0.841645 | 4.191269e-58 | -8.615850e-47 |
| Msa0077010 | Msa1100530 | -0.809993 | 1.437425e-50 | -8.615850e-47 |
| Msa0077010 | Msa1104210 | 0.817666 | 2.929771e-52 | -8.615850e-47 |
| Msa0077010 | Msa1120810 | 0.818588 | 1.812678e-52 | -8.615850e-47 |
| Msa0077010 | Msa1122820 | 0.832243 | 1.056540e-55 | -8.615850e-47 |
| Msa0077010 | Msa1125500 | 0.869056 | 4.119059e-66 | -8.615850e-47 |
| Msa0077010 | Msa1125580 | 0.836782 | 7.647853e-57 | -8.615850e-47 |
| Msa0077010 | Msa1126850 | 0.823002 | 1.750962e-53 | -8.615850e-47 |
| Msa0077010 | Msa1135810 | -0.800137 | 1.659726e-48 | -8.615850e-47 |
| Msa0077010 | Msa1138870 | 0.837249 | 5.810767e-57 | -8.615850e-47 |
| Msa0077010 | Msa1153280 | 0.819075 | 1.404996e-52 | -8.615850e-47 |
| Msa0077010 | Msa1156870 | 0.808850 | 2.529318e-50 | -8.615850e-47 |
| Msa0077010 | Msa1165780 | 0.842209 | 2.973674e-58 | -8.615850e-47 |
| Msa0077010 | Msa1165960 | 0.814710 | 1.341180e-51 | -8.615850e-47 |
| Msa0077010 | Msa1166870 | 0.874933 | 4.582680e-68 | -8.615850e-47 |
| Msa0077010 | Msa1176360 | 0.807932 | 3.970013e-50 | -8.615850e-47 |
| Msa0077010 | Msa1176980 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
| Msa0077010 | Msa1179950 | 0.841301 | 5.162715e-58 | -8.615850e-47 |
| Msa0077010 | Msa1179980 | 0.864148 | 1.497976e-64 | -8.615850e-47 |
| Msa0077010 | Msa1184370 | 0.841894 | 3.602956e-58 | -8.615850e-47 |
| Msa0077010 | Msa1201830 | 0.864149 | 1.496423e-64 | -8.615850e-47 |
| Msa0077010 | Msa1202580 | 0.816766 | 4.668444e-52 | -8.615850e-47 |
| Msa0077010 | Msa1203900 | 0.807074 | 6.037289e-50 | -8.615850e-47 |
| Msa0077010 | Msa1205850 | 0.849990 | 2.267577e-60 | -8.615850e-47 |
| Msa0077010 | Msa1206650 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0077010 | Msa1207730 | 0.804965 | 1.677141e-49 | -8.615850e-47 |
| Msa0077010 | Msa1208020 | 0.827697 | 1.355718e-54 | -8.615850e-47 |
| Msa0077010 | Msa1211830 | 0.824165 | 9.358367e-54 | -8.615850e-47 |
| Msa0077010 | Msa1226610 | 0.811504 | 6.773036e-51 | -8.615850e-47 |
| Msa0077010 | Msa1227690 | 0.874513 | 6.370306e-68 | -8.615850e-47 |
| Msa0077010 | Msa1234980 | 0.816143 | 6.436505e-52 | -8.615850e-47 |
| Msa0077010 | Msa1241190 | 0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa0077010 | Msa1253810 | 0.820459 | 6.782430e-53 | -8.615850e-47 |
| Msa0077010 | Msa1256770 | 0.832942 | 7.088446e-56 | -8.615850e-47 |
| Msa0077010 | Msa1264210 | 0.815123 | 1.086147e-51 | -8.615850e-47 |
| Msa0077010 | Msa1265630 | 0.803910 | 2.782163e-49 | -8.615850e-47 |
| Msa0077010 | Msa1270620 | 0.856565 | 2.951386e-62 | -8.615850e-47 |
| Msa0077010 | Msa1270690 | 0.857325 | 1.762820e-62 | -8.615850e-47 |
| Msa0077010 | Msa1271580 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
| Msa0077010 | Msa1278900 | 0.810865 | 9.320268e-51 | -8.615850e-47 |
| Msa0077010 | Msa1294840 | 0.868381 | 6.812375e-66 | -8.615850e-47 |
| Msa0077010 | Msa1294960 | 0.819124 | 1.369339e-52 | -8.615850e-47 |
| Msa0077010 | Msa1295110 | 0.812673 | 3.766374e-51 | -8.615850e-47 |
| Msa0077010 | Msa1298050 | 0.800953 | 1.131290e-48 | -8.615850e-47 |
| Msa0077010 | Msa1299700 | 0.822037 | 2.934001e-53 | -8.615850e-47 |
| Msa0077010 | Msa1306990 | 0.846489 | 2.104050e-59 | -8.615850e-47 |
| Msa0077010 | Msa1310690 | 0.827880 | 1.225137e-54 | -8.615850e-47 |
| Msa0077010 | Msa1317270 | 0.809333 | 1.993345e-50 | -8.615850e-47 |
| Msa0077010 | Msa1325800 | 0.815395 | 9.449948e-52 | -8.615850e-47 |
| Msa0077010 | Msa1329300 | 0.802583 | 5.237613e-49 | -8.615850e-47 |
| Msa0077010 | Msa1329450 | 0.801476 | 8.843787e-49 | -8.615850e-47 |
| Msa0077010 | Msa1331250 | 0.824329 | 8.563001e-54 | -8.615850e-47 |
| Msa0077010 | Msa1331710 | 0.855076 | 8.041522e-62 | -8.615850e-47 |
| Msa0077010 | Msa1333970 | 0.814940 | 1.192391e-51 | -8.615850e-47 |
| Msa0077010 | Msa1340830 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
| Msa0077010 | Msa1345450 | 0.840688 | 7.478736e-58 | -8.615850e-47 |
| Msa0077010 | Msa1349570 | 0.855844 | 4.803050e-62 | -8.615850e-47 |
| Msa0077010 | Msa1351540 | 0.834356 | 3.141816e-56 | -8.615850e-47 |
| Msa0077010 | Msa1355700 | 0.840461 | 8.575260e-58 | -8.615850e-47 |
| Msa0077010 | Msa1358430 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
| Msa0077010 | Msa1362420 | 0.816490 | 5.384925e-52 | -8.615850e-47 |
| Msa0077010 | Msa1363330 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0077010 | Msa1363860 | 0.811588 | 6.495525e-51 | -8.615850e-47 |
| Msa0077010 | Msa1365860 | 0.838690 | 2.475588e-57 | -8.615850e-47 |
| Msa0077010 | Msa1369190 | 0.854113 | 1.527537e-61 | -8.615850e-47 |
| Msa0077010 | Msa1370860 | 0.821471 | 3.967921e-53 | -8.615850e-47 |
| Msa0077010 | Msa1379760 | 0.801585 | 8.399865e-49 | -8.615850e-47 |
| Msa0077010 | Msa1380970 | 0.806498 | 7.988300e-50 | -8.615850e-47 |
| Msa0077010 | Msa1383350 | 0.800158 | 1.643168e-48 | -8.615850e-47 |
| Msa0077010 | Msa1386600 | 0.803104 | 4.087564e-49 | -8.615850e-47 |
| Msa0077010 | Msa1397940 | 0.836792 | 7.604617e-57 | -8.615850e-47 |
| Msa0077010 | Msa1408150 | 0.806244 | 9.038387e-50 | -8.615850e-47 |
| Msa0077010 | Msa1411950 | 0.814530 | 1.470205e-51 | -8.615850e-47 |
| Msa0077010 | Msa1413500 | 0.853344 | 2.543040e-61 | -8.615850e-47 |
| Msa0077010 | Msa1423300 | 0.838809 | 2.305759e-57 | -8.615850e-47 |
| Msa0077010 | Msa1426370 | 0.811580 | 6.520141e-51 | -8.615850e-47 |
| Msa0077010 | Msa1426490 | 0.822097 | 2.842761e-53 | -8.615850e-47 |
| Msa0077010 | Msa1426920 | 0.800671 | 1.292032e-48 | -8.615850e-47 |
| Msa0077010 | Msa1427560 | 0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa0077010 | Msa1432480 | 0.818247 | 2.165978e-52 | -8.615850e-47 |
| Msa0077010 | Msa1433600 | 0.807598 | 4.674935e-50 | -8.615850e-47 |
| Msa0077010 | Msa1435440 | 0.841240 | 5.356105e-58 | -8.615850e-47 |
| Msa0077010 | Msa1435770 | 0.805240 | 1.468618e-49 | -8.615850e-47 |
| Msa0077010 | Msa1438640 | 0.811023 | 8.614550e-51 | -8.615850e-47 |
| Msa0077010 | Msa1442850 | 0.826098 | 3.268057e-54 | -8.615850e-47 |
| Msa0077010 | Msa1450280 | 0.863922 | 1.760898e-64 | -8.615850e-47 |
| Msa0077010 | Msa1456050 | 0.805035 | 1.621338e-49 | -8.615850e-47 |
| Msa0077010 | Msa1457790 | 0.826585 | 2.501956e-54 | -8.615850e-47 |
| Msa0077010 | Msa1462860 | 0.849402 | 3.309811e-60 | -8.615850e-47 |
| Msa0077010 | Msa1465080 | 0.810071 | 1.382824e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077010 | MtrunA17_Chr1g0186001 | 100.000 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 8.18e-163 | 447 |
| Msa0077010 | MtrunA17_Chr8g0381851 | 65.919 | 223 | 62 | 5 | 1 | 217 | 1 | 215 | 1.36e-99 | 288 |
| Msa0077010 | MtrunA17_Chr4g0050311 | 68.947 | 190 | 52 | 3 | 35 | 217 | 9 | 198 | 3.05e-88 | 258 |
| Msa0077010 | MtrunA17_Chr1g0182761 | 63.687 | 179 | 58 | 1 | 46 | 217 | 105 | 283 | 8.98e-62 | 194 |
| Msa0077010 | MtrunA17_Chr1g0170731 | 57.609 | 92 | 32 | 1 | 101 | 192 | 3 | 87 | 2.05e-32 | 113 |
| Msa0077010 | MtrunA17_Chr3g0087861 | 36.872 | 179 | 100 | 7 | 43 | 211 | 454 | 629 | 1.05e-21 | 92.8 |
| Msa0077010 | MtrunA17_Chr8g0351991 | 36.170 | 141 | 77 | 6 | 79 | 211 | 623 | 758 | 2.99e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077010 | AT5G51120.1 | 78.804 | 184 | 37 | 2 | 35 | 217 | 45 | 227 | 8.59e-103 | 296 |
| Msa0077010 | AT5G65260.1 | 69.683 | 221 | 61 | 4 | 1 | 217 | 1 | 219 | 3.20e-102 | 295 |
| Msa0077010 | AT5G10350.1 | 68.326 | 221 | 61 | 4 | 1 | 217 | 1 | 216 | 8.16e-102 | 294 |
| Msa0077010 | AT5G51120.2 | 64.706 | 221 | 40 | 2 | 35 | 217 | 45 | 265 | 1.19e-94 | 277 |
| Msa0077010 | AT5G10350.2 | 68.599 | 207 | 56 | 4 | 1 | 203 | 1 | 202 | 3.37e-93 | 271 |
| Msa0077010 | AT5G51120.3 | 82.014 | 139 | 24 | 1 | 80 | 217 | 4 | 142 | 1.18e-80 | 237 |
| Msa0077010 | AT5G10350.4 | 71.579 | 95 | 23 | 3 | 127 | 217 | 1 | 95 | 2.27e-39 | 131 |
| Msa0077010 | AT5G10350.3 | 71.579 | 95 | 23 | 3 | 127 | 217 | 1 | 95 | 2.27e-39 | 131 |
| Msa0077010 | AT5G10350.5 | 71.579 | 95 | 23 | 3 | 127 | 217 | 1 | 95 | 2.27e-39 | 131 |
| Msa0077010 | AT5G10350.6 | 71.579 | 95 | 23 | 3 | 127 | 217 | 1 | 95 | 2.27e-39 | 131 |
| Msa0077010 | AT3G12640.4 | 33.636 | 110 | 62 | 2 | 89 | 187 | 467 | 576 | 1.41e-12 | 66.6 |
| Msa0077010 | AT3G12640.2 | 33.636 | 110 | 62 | 2 | 89 | 187 | 499 | 608 | 1.65e-12 | 66.2 |
| Msa0077010 | AT3G12640.3 | 33.636 | 110 | 62 | 2 | 89 | 187 | 499 | 608 | 1.65e-12 | 66.2 |
| Msa0077010 | AT3G12640.1 | 33.636 | 110 | 62 | 2 | 89 | 187 | 475 | 584 | 1.74e-12 | 66.2 |
| Msa0077010 | AT2G24350.2 | 32.857 | 140 | 80 | 6 | 35 | 165 | 254 | 388 | 4.07e-11 | 62.0 |
| Msa0077010 | AT2G24350.1 | 32.857 | 140 | 80 | 6 | 35 | 165 | 383 | 517 | 7.22e-11 | 61.6 |
Find 80 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTAAAAGAATATTATAAA+AGG | 0.204372 | 1_2:-53454389 | Msa0077010:five_prime_UTR |
| CAGGAAGAGCACGAAGTTTA+TGG | 0.241947 | 1_2:-53454243 | Msa0077010:CDS |
| GTTCTTATTCTCAACTTAAT+AGG | 0.248384 | 1_2:-53450162 | Msa0077010:three_prime_UTR |
| ACAATATTGACAGACAAATT+TGG | 0.277446 | 1_2:-53451668 | Msa0077010:CDS |
| TTGTAATAATGTTTATTTGA+TGG | 0.287713 | 1_2:-53450087 | Msa0077010:three_prime_UTR |
| TCAGAAATTTATATGAATTT+CGG | 0.301138 | 1_2:-53449823 | Msa0077010:three_prime_UTR |
| AAATGCTGTTGGACTTCTTC+AGG | 0.339186 | 1_2:+53451719 | None:intergenic |
| TTAAATGCCCTTAACTGTTA+AGG | 0.350727 | 1_2:-53450030 | Msa0077010:three_prime_UTR |
| GTTGAGAATAAGAACTAGTA+TGG | 0.363623 | 1_2:+53450170 | None:intergenic |
| ATGAATTTCGGTGATCGAAT+TGG | 0.373691 | 1_2:-53449811 | Msa0077010:three_prime_UTR |
| TCTTTCCACCATATGCTTAC+GGG | 0.386901 | 1_2:-53451367 | Msa0077010:intron |
| ATGTACATCCTTAACAGTTA+AGG | 0.397703 | 1_2:+53450022 | None:intergenic |
| GCAAAACGTACAAATGTTCC+TGG | 0.402106 | 1_2:-53451455 | Msa0077010:CDS |
| TTCTTTCCACCATATGCTTA+CGG | 0.403589 | 1_2:-53451368 | Msa0077010:CDS |
| TCTACATAAGCAAATCCTTT+CGG | 0.404767 | 1_2:+53451641 | None:intergenic |
| CCTAACCTTGGTGGTGTGAT+TGG | 0.419662 | 1_2:+53454140 | None:intergenic |
| TGTACATCCTTAACAGTTAA+GGG | 0.419777 | 1_2:+53450023 | None:intergenic |
| TTCTGTATCTCAAGCTGAAA+AGG | 0.437005 | 1_2:-53453791 | Msa0077010:CDS |
| ATTAAAAGAATATTATAAAA+GGG | 0.443442 | 1_2:-53454388 | Msa0077010:five_prime_UTR |
| CTTCCGTACTGCTTCAATCC+AGG | 0.447125 | 1_2:+53451437 | None:intergenic |
| AAAGAGATGGGCGCTGTTCA+AGG | 0.456481 | 1_2:-53453964 | Msa0077010:intron |
| AGACGATAGAGTAGCGAAGA+TGG | 0.465591 | 1_2:-53454268 | Msa0077010:exon |
| AATAGTGGAGGCAACTATGC+AGG | 0.472943 | 1_2:-53449935 | Msa0077010:three_prime_UTR |
| ACATCTTTATTATAAAGATA+AGG | 0.480340 | 1_2:-53450134 | Msa0077010:three_prime_UTR |
| CTGCTGGTTTCCGCGGTAGG+AGG | 0.481689 | 1_2:-53451409 | Msa0077010:CDS |
| ATAGAAGACCCACCCGATAC+AGG | 0.483334 | 1_2:-53450193 | Msa0077010:CDS |
| GATAGTTACCCGTAAGCATA+TGG | 0.485362 | 1_2:+53451359 | None:intergenic |
| TCAAGCTGAAAAGGAGGAAG+TGG | 0.486267 | 1_2:-53453782 | Msa0077010:CDS |
| ATCCATGTCAACCTCTTCAT+CGG | 0.493847 | 1_2:+53454209 | None:intergenic |
| CTCCTACCGCGGAAACCAGC+AGG | 0.495710 | 1_2:+53451410 | None:intergenic |
| TAAACTATTCAGTTCAATGT+TGG | 0.496084 | 1_2:-53449865 | Msa0077010:three_prime_UTR |
| AGAACTAGTATGGCCTGTAT+CGG | 0.496323 | 1_2:+53450180 | None:intergenic |
| TCCATGTCAACCTCTTCATC+GGG | 0.505267 | 1_2:+53454210 | None:intergenic |
| GAACGACAAGGAGAAGAAGA+AGG | 0.509991 | 1_2:-53454301 | Msa0077010:five_prime_UTR |
| GAACTAGTATGGCCTGTATC+GGG | 0.512109 | 1_2:+53450181 | None:intergenic |
| GAGGTTTACCTGTGCAATAG+TGG | 0.512371 | 1_2:-53449950 | Msa0077010:three_prime_UTR |
| AAGAATGGTGCAGGCATGAA+AGG | 0.514431 | 1_2:+53451386 | None:intergenic |
| TTAAATGAAACTGAATTGCA+TGG | 0.518323 | 1_2:-53451581 | Msa0077010:CDS |
| TAAGCATATGGTGGAAAGAA+TGG | 0.526698 | 1_2:+53451371 | None:intergenic |
| TCGAATTGGTTATGTGCTGT+TGG | 0.529283 | 1_2:-53449797 | Msa0077010:three_prime_UTR |
| CACAGGACTGAAAATGCTGT+TGG | 0.529319 | 1_2:+53451708 | None:intergenic |
| TAGAGTAGCGAAGATGGAGC+AGG | 0.531579 | 1_2:-53454262 | Msa0077010:exon |
| GACAAATTTGGTCAACCGAA+AGG | 0.538920 | 1_2:-53451656 | Msa0077010:CDS |
| TATGGTGGAAAGAATGGTGC+AGG | 0.545682 | 1_2:+53451377 | None:intergenic |
| CGGGTGGGTCTTCTATATCT+CGG | 0.548551 | 1_2:+53450200 | None:intergenic |
| GCATGAAAGGCCTCCTACCG+CGG | 0.549694 | 1_2:+53451399 | None:intergenic |
| AACCCTAACCCTAACCTTGG+TGG | 0.550125 | 1_2:+53454131 | None:intergenic |
| GACTCTGTTCACAGTACCAC+AGG | 0.550448 | 1_2:+53451691 | None:intergenic |
| CAGGTAAACCTCAATGACTC+AGG | 0.554663 | 1_2:+53449961 | None:intergenic |
| ATTGCATGGCCGACAGCTGA+AGG | 0.563098 | 1_2:-53451567 | Msa0077010:intron |
| CAGTACGGAAGAAGACCTGC+TGG | 0.568352 | 1_2:-53451425 | Msa0077010:CDS |
| GACCTGCTGGTTTCCGCGGT+AGG | 0.570934 | 1_2:-53451412 | Msa0077010:CDS |
| AGCTAAGGTTGAGAAAGAGA+TGG | 0.576917 | 1_2:-53453977 | Msa0077010:CDS |
| TCAAATAAACATTATTACAA+TGG | 0.582290 | 1_2:+53450090 | None:intergenic |
| GATGCTCGATCGATCTATGT+TGG | 0.582767 | 1_2:-53453760 | Msa0077010:CDS |
| TCAATGACTCAGGGAAAATG+AGG | 0.585147 | 1_2:+53449971 | None:intergenic |
| AGTTGCCTCCACTATTGCAC+AGG | 0.586210 | 1_2:+53449942 | None:intergenic |
| ATGTACTATATCGACAAAGT+AGG | 0.590533 | 1_2:-53450001 | Msa0077010:three_prime_UTR |
| CTTATTCTCAACTTAATAGG+CGG | 0.591121 | 1_2:-53450159 | Msa0077010:three_prime_UTR |
| GCTAAGGTTGAGAAAGAGAT+GGG | 0.591216 | 1_2:-53453976 | Msa0077010:CDS |
| TTGATGTTCAGCATCTATGT+CGG | 0.596596 | 1_2:+53454185 | None:intergenic |
| CTAGTATGGCCTGTATCGGG+TGG | 0.600648 | 1_2:+53450184 | None:intergenic |
| TCCCGATGAAGAGGTTGACA+TGG | 0.607730 | 1_2:-53454211 | Msa0077010:CDS |
| ATAGTGGAGGCAACTATGCA+GGG | 0.608735 | 1_2:-53449934 | Msa0077010:three_prime_UTR |
| GTTCCTGGATTGAAGCAGTA+CGG | 0.610328 | 1_2:-53451440 | Msa0077010:CDS |
| TCTTCGCGAAATGCAAGCTA+AGG | 0.612879 | 1_2:-53453992 | Msa0077010:CDS |
| TGTATCTCAAGCTGAAAAGG+AGG | 0.614985 | 1_2:-53453788 | Msa0077010:CDS |
| TGAGATACAGAAGACCCAGC+AGG | 0.620132 | 1_2:+53453802 | None:intergenic |
| AATTGGAGGATATGAAGAAG+AGG | 0.623414 | 1_2:-53454044 | Msa0077010:CDS |
| AGAAGACCTGCTGGTTTCCG+CGG | 0.627211 | 1_2:-53451416 | Msa0077010:CDS |
| TAGTATGGCCTGTATCGGGT+GGG | 0.627864 | 1_2:+53450185 | None:intergenic |
| AGTTTGAAGTAGGTTTACTG+TGG | 0.641895 | 1_2:-53449757 | Msa0077010:three_prime_UTR |
| AGTTACCCGTAAGCATATGG+TGG | 0.644904 | 1_2:+53451362 | None:intergenic |
| GAAGAGGCTGAAAGAGATCG+AGG | 0.648698 | 1_2:-53454028 | Msa0077010:CDS |
| TGCTGACATTCCCGATGAAG+AGG | 0.653227 | 1_2:-53454220 | Msa0077010:CDS |
| AGGTAAACCTCAATGACTCA+GGG | 0.660836 | 1_2:+53449962 | None:intergenic |
| GTTTACCTGTGCAATAGTGG+AGG | 0.663378 | 1_2:-53449947 | Msa0077010:three_prime_UTR |
| CGCATCCAATCACACCACCA+AGG | 0.672127 | 1_2:-53454145 | Msa0077010:intron |
| GAGAGAGTGAGAGAACGACA+AGG | 0.682441 | 1_2:-53454313 | Msa0077010:five_prime_UTR |
| ATAGATGCTGAACATCAAGA+AGG | 0.684507 | 1_2:-53454180 | Msa0077010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATCATAAATAAAATCAA+AGG | + | chr1_2:53450480-53450499 | None:intergenic | 10.0% |
| !!! | TTGATTTACTTTTTTTTTTT+GGG | - | chr1_2:53450758-53450777 | Msa0077010:intron | 10.0% |
| !!! | AAGATAGTTTTTTTAAAAAA+TGG | + | chr1_2:53451275-53451294 | None:intergenic | 10.0% |
| !! | TATATATATATGTTAACAAA+TGG | + | chr1_2:53451718-53451737 | None:intergenic | 10.0% |
| !!! | TTTTAAAAATTTGAATGATA+TGG | + | chr1_2:53451907-53451926 | None:intergenic | 10.0% |
| !! | TAATATTTAAATAAAACTAG+TGG | - | chr1_2:53453005-53453024 | Msa0077010:intron | 10.0% |
| !!! | ATGATTTTTATTTTATGATT+TGG | - | chr1_2:53453761-53453780 | Msa0077010:CDS | 10.0% |
| !!! | AAAATGTTTTTATTTATTCA+CGG | - | chr1_2:53453920-53453939 | Msa0077010:intron | 10.0% |
| !! | AATTTAATGTTTGGATTATT+GGG | - | chr1_2:53450703-53450722 | Msa0077010:intron | 15.0% |
| !!! | GTTGATTTACTTTTTTTTTT+TGG | - | chr1_2:53450757-53450776 | Msa0077010:intron | 15.0% |
| !!! | TGATTTACTTTTTTTTTTTG+GGG | - | chr1_2:53450759-53450778 | Msa0077010:intron | 15.0% |
| !!! | AAATGTTCTAAATTCTAATA+GGG | + | chr1_2:53451020-53451039 | None:intergenic | 15.0% |
| !!! | TAGTTTTTTTAAAAAATGGA+AGG | + | chr1_2:53451271-53451290 | None:intergenic | 15.0% |
| !! | TTAAAAAAACTATCTTGAAA+AGG | - | chr1_2:53451279-53451298 | Msa0077010:intron | 15.0% |
| !! | TATATATATATAACCCAAAA+TGG | - | chr1_2:53451772-53451791 | Msa0077010:intron | 15.0% |
| !! | CATTATAAACATGTAAAATT+TGG | + | chr1_2:53451953-53451972 | None:intergenic | 15.0% |
| !!! | TAGATAGATCTAAAATTATA+TGG | - | chr1_2:53452147-53452166 | Msa0077010:intron | 15.0% |
| !! | ATAATTCAATTAAAACCAAA+TGG | + | chr1_2:53452701-53452720 | None:intergenic | 15.0% |
| !!! | ATTTGGTTTTAATTGAATTA+TGG | - | chr1_2:53452700-53452719 | Msa0077010:intron | 15.0% |
| !!! | ATTTTTATTTTATGATTTGG+TGG | - | chr1_2:53453764-53453783 | Msa0077010:CDS | 15.0% |
| !! | AATAATTAAACATAAAGCAT+GGG | + | chr1_2:53453946-53453965 | None:intergenic | 15.0% |
| !! | TAATAATTAAACATAAAGCA+TGG | + | chr1_2:53453947-53453966 | None:intergenic | 15.0% |
| !! | ACATCTTTATTATAAAGATA+AGG | - | chr1_2:53454062-53454081 | Msa0077010:intron | 15.0% |
| !! | TCAAATAAACATTATTACAA+TGG | + | chr1_2:53454109-53454128 | None:intergenic | 15.0% |
| !! | TTGTAATAATGTTTATTTGA+TGG | - | chr1_2:53454109-53454128 | Msa0077010:intron | 15.0% |
| !! | TCAGAAATTTATATGAATTT+CGG | - | chr1_2:53454373-53454392 | Msa0077010:five_prime_UTR | 15.0% |
| !!! | TCTTAATTTTATATGCAACA+AGG | + | chr1_2:53449777-53449796 | None:intergenic | 20.0% |
| !! | TAGGTTAAGAATTTAATGTT+TGG | - | chr1_2:53450694-53450713 | Msa0077010:intron | 20.0% |
| !! | GAATTTAATGTTTGGATTAT+TGG | - | chr1_2:53450702-53450721 | Msa0077010:intron | 20.0% |
| !!! | GATTTACTTTTTTTTTTTGG+GGG | - | chr1_2:53450760-53450779 | Msa0077010:intron | 20.0% |
| !!! | AAATGTCGATTTTGTTTTTT+TGG | - | chr1_2:53450896-53450915 | Msa0077010:intron | 20.0% |
| !!! | AATGTCGATTTTGTTTTTTT+GGG | - | chr1_2:53450897-53450916 | Msa0077010:intron | 20.0% |
| !!! | AATGTTCTAAATTCTAATAG+GGG | + | chr1_2:53451019-53451038 | None:intergenic | 20.0% |
| !!! | CAAATGTTCTAAATTCTAAT+AGG | + | chr1_2:53451021-53451040 | None:intergenic | 20.0% |
| !!! | CTATTAGAATTTAGAACATT+TGG | - | chr1_2:53451019-53451038 | Msa0077010:intron | 20.0% |
| !! | AAATTAATGAAAAGTGAAAC+AGG | + | chr1_2:53451175-53451194 | None:intergenic | 20.0% |
| !!! | AATTTTATTTTTAGAGTGTG+TGG | - | chr1_2:53451190-53451209 | Msa0077010:intron | 20.0% |
| !! | CTATTTAACAACACTTAATT+CGG | + | chr1_2:53451521-53451540 | None:intergenic | 20.0% |
| !! | TATGAAAGATTATGAAATAG+CGG | - | chr1_2:53451616-53451635 | Msa0077010:CDS | 20.0% |
| !!! | TCAAATTTTTAAAAATACCC+AGG | - | chr1_2:53451913-53451932 | Msa0077010:intron | 20.0% |
| !!! | TTTTAAGCACTTAAATTTCA+TGG | - | chr1_2:53452064-53452083 | Msa0077010:intron | 20.0% |
| !! | TTTAAGCACTTAAATTTCAT+GGG | - | chr1_2:53452065-53452084 | Msa0077010:intron | 20.0% |
| !!! | TAATTTTAGATCTATCTAGA+TGG | + | chr1_2:53452145-53452164 | None:intergenic | 20.0% |
| !!! | TTTTTGAGATTTAAATGACA+TGG | + | chr1_2:53452390-53452409 | None:intergenic | 20.0% |
| !! | TTAAATCTCAAAAACTTCAA+CGG | - | chr1_2:53452396-53452415 | Msa0077010:intron | 20.0% |
| !!! | ATGTTTACTTTTTGTGTAAA+TGG | - | chr1_2:53452961-53452980 | Msa0077010:intron | 20.0% |
| !! | ATTTAAATAAAACTAGTGGA+TGG | - | chr1_2:53453009-53453028 | Msa0077010:intron | 20.0% |
| !! | ATAGTAATACATCTAATGAT+AGG | - | chr1_2:53453045-53453064 | Msa0077010:intron | 20.0% |
| !! | AAAACTGTATATATACTTGT+TGG | + | chr1_2:53453219-53453238 | None:intergenic | 20.0% |
| !!! | AACAAGTATATATACAGTTT+TGG | - | chr1_2:53453218-53453237 | Msa0077010:intron | 20.0% |
| !! | TAGCTTATTCTGATATAATA+AGG | - | chr1_2:53453484-53453503 | Msa0077010:intron | 20.0% |
| !! | ATATTTAGAAACAACTTGTA+CGG | - | chr1_2:53453578-53453597 | Msa0077010:intron | 20.0% |
| !! | TAATATTAAAAAACAAAGCC+TGG | + | chr1_2:53453888-53453907 | None:intergenic | 20.0% |
| !!! | CAATAGTTTACTAAGTTTTT+CGG | - | chr1_2:53454293-53454312 | Msa0077010:five_prime_UTR | 20.0% |
| !!! | TTTTAAAGTTAGTTTGAAGT+AGG | - | chr1_2:53454429-53454448 | Msa0077010:five_prime_UTR | 20.0% |
| ! | ATTCAGATCTGTTTATCATT+TGG | - | chr1_2:53450326-53450345 | Msa0077010:intron | 25.0% |
| !! | TTATCATTTGGCTCAATTAT+TGG | - | chr1_2:53450338-53450357 | Msa0077010:intron | 25.0% |
| !! | TTGCTTACAGTTTGAATTTT+AGG | - | chr1_2:53450675-53450694 | Msa0077010:intron | 25.0% |
| !! | ATGTTCTAAATTCTAATAGG+GGG | + | chr1_2:53451018-53451037 | None:intergenic | 25.0% |
| !!! | GCTCTTATTGTTAGTTTTAA+TGG | + | chr1_2:53451820-53451839 | None:intergenic | 25.0% |
| ! | AAATTTGAATGATATGGATC+TGG | + | chr1_2:53451901-53451920 | None:intergenic | 25.0% |
| ! | CCATAACATTTACAAATGAT+CGG | + | chr1_2:53451984-53452003 | None:intergenic | 25.0% |
| ! | GAGTATACTAAAATAGTTAG+AGG | - | chr1_2:53452087-53452106 | Msa0077010:intron | 25.0% |
| !!! | TGGTTTCTAAAATATGAATC+AGG | - | chr1_2:53452437-53452456 | Msa0077010:intron | 25.0% |
| ! | ACAATATTGACAGACAAATT+TGG | - | chr1_2:53452528-53452547 | Msa0077010:intron | 25.0% |
| ! | TTAAATGAAACTGAATTGCA+TGG | - | chr1_2:53452615-53452634 | Msa0077010:intron | 25.0% |
| ! | ATTAAAACCAAATGGAAACA+TGG | + | chr1_2:53452693-53452712 | None:intergenic | 25.0% |
| ! | TGTATAACCAAAAACTACAT+AGG | - | chr1_2:53453180-53453199 | Msa0077010:intron | 25.0% |
| ! | GTATAACCAAAAACTACATA+GGG | - | chr1_2:53453181-53453200 | Msa0077010:intron | 25.0% |
| ! | ATAGAATGAACGAACAATAA+AGG | + | chr1_2:53453656-53453675 | None:intergenic | 25.0% |
| ! | TATTACCACATTTAATGATG+TGG | + | chr1_2:53453713-53453732 | None:intergenic | 25.0% |
| ! | ATAGAGAAAGAATGACAATT+AGG | + | chr1_2:53453836-53453855 | None:intergenic | 25.0% |
| ! | TTAATATTTCTTCACAATCC+AGG | - | chr1_2:53453867-53453886 | Msa0077010:intron | 25.0% |
| !! | AAATAATTTTTCCATGCAGA+AGG | - | chr1_2:53453970-53453989 | Msa0077010:CDS | 25.0% |
| !! | AATAATTTTTCCATGCAGAA+GGG | - | chr1_2:53453971-53453990 | Msa0077010:CDS | 25.0% |
| ! | GTTCTTATTCTCAACTTAAT+AGG | - | chr1_2:53454034-53454053 | Msa0077010:CDS | 25.0% |
| ! | TAAACTATTCAGTTCAATGT+TGG | - | chr1_2:53454331-53454350 | Msa0077010:five_prime_UTR | 25.0% |
| TACCATAGACAAAAATCTCT+CGG | - | chr1_2:53449851-53449870 | Msa0077010:three_prime_UTR | 30.0% | |
| !! | TTAACATGAATCGATTTTGC+AGG | - | chr1_2:53450129-53450148 | Msa0077010:three_prime_UTR | 30.0% |
| !!! | TTTTTGATTTTAGATCCTGC+TGG | - | chr1_2:53450379-53450398 | Msa0077010:intron | 30.0% |
| !!! | TTTTGATTTTAGATCCTGCT+GGG | - | chr1_2:53450380-53450399 | Msa0077010:intron | 30.0% |
| TAGAACATTTAGGTGTATGA+TGG | - | chr1_2:53450575-53450594 | Msa0077010:intron | 30.0% | |
| ! | ACTCAATTCTGCAATCTTTT+TGG | - | chr1_2:53450623-53450642 | Msa0077010:intron | 30.0% |
| TAATGTTTGGATTATTGGGA+TGG | - | chr1_2:53450707-53450726 | Msa0077010:intron | 30.0% | |
| AATGTTTGGATTATTGGGAT+GGG | - | chr1_2:53450708-53450727 | Msa0077010:intron | 30.0% | |
| ! | GACTTTTCAGAAACATGTTA+AGG | + | chr1_2:53450822-53450841 | None:intergenic | 30.0% |
| TGAAAACTAAAACAGCTTGT+CGG | + | chr1_2:53450870-53450889 | None:intergenic | 30.0% | |
| ! | TGTTCTAAATTCTAATAGGG+GGG | + | chr1_2:53451017-53451036 | None:intergenic | 30.0% |
| TAAGCACCTATAAAGTAGTT+TGG | - | chr1_2:53451134-53451153 | Msa0077010:intron | 30.0% | |
| CCAATTCCAAACTACTTTAT+AGG | + | chr1_2:53451143-53451162 | None:intergenic | 30.0% | |
| ! | CCTATAAAGTAGTTTGGAAT+TGG | - | chr1_2:53451140-53451159 | Msa0077010:intron | 30.0% |
| !!! | TATTTTTAGAGTGTGTGGAA+TGG | - | chr1_2:53451195-53451214 | Msa0077010:intron | 30.0% |
| GGTAATTTAGAAATTGAGCA+TGG | - | chr1_2:53451361-53451380 | Msa0077010:intron | 30.0% | |
| TCTGATATCATGTCCTTTAA+AGG | - | chr1_2:53451420-53451439 | Msa0077010:CDS | 30.0% | |
| GGAAACTAAAACACCTTTAA+AGG | + | chr1_2:53451436-53451455 | None:intergenic | 30.0% | |
| AGGAAAACAAACTAATGCTA+GGG | + | chr1_2:53451457-53451476 | None:intergenic | 30.0% | |
| GTTGTTAAATAGCAGTATAG+CGG | - | chr1_2:53451529-53451548 | Msa0077010:intron | 30.0% | |
| ! | ATATAACCCAAAATGGACTT+CGG | - | chr1_2:53451779-53451798 | Msa0077010:intron | 30.0% |
| CCGATCATTTGTAAATGTTA+TGG | - | chr1_2:53451981-53452000 | Msa0077010:intron | 30.0% | |
| TATGGTAAACTTCTCATAAC+TGG | - | chr1_2:53451999-53452018 | Msa0077010:intron | 30.0% | |
| ACTAAAATAGTTAGAGGAAG+AGG | - | chr1_2:53452093-53452112 | Msa0077010:intron | 30.0% | |
| CTAAAATAGTTAGAGGAAGA+GGG | - | chr1_2:53452094-53452113 | Msa0077010:intron | 30.0% | |
| TTAGATCTATCTAGATGGTT+TGG | + | chr1_2:53452140-53452159 | None:intergenic | 30.0% | |
| ATATGGCCTATCTGTATTTA+TGG | - | chr1_2:53452164-53452183 | Msa0077010:intron | 30.0% | |
| AAAATGCATTAGACATGTGA+GGG | + | chr1_2:53452344-53452363 | None:intergenic | 30.0% | |
| AAAAATGCATTAGACATGTG+AGG | + | chr1_2:53452345-53452364 | None:intergenic | 30.0% | |
| TCTACATAAGCAAATCCTTT+CGG | + | chr1_2:53452558-53452577 | None:intergenic | 30.0% | |
| ATAAAAATACCTTCAGCTGT+CGG | + | chr1_2:53452641-53452660 | None:intergenic | 30.0% | |
| ! | TGAATTATGGTTTTTCCTTC+AGG | - | chr1_2:53452713-53452732 | Msa0077010:intron | 30.0% |
| CAAAAGCAACAATGAATTCT+GGG | + | chr1_2:53452892-53452911 | None:intergenic | 30.0% | |
| ACAAAAGCAACAATGAATTC+TGG | + | chr1_2:53452893-53452912 | None:intergenic | 30.0% | |
| ! | GACATCCAATGTGTAAATTT+TGG | - | chr1_2:53452921-53452940 | Msa0077010:intron | 30.0% |
| AGATGCCAAAATTTACACAT+TGG | + | chr1_2:53452929-53452948 | None:intergenic | 30.0% | |
| GGTATACACTACAGTTAAAA+TGG | - | chr1_2:53453274-53453293 | Msa0077010:intron | 30.0% | |
| TACACTACAGTTAAAATGGA+TGG | - | chr1_2:53453278-53453297 | Msa0077010:intron | 30.0% | |
| TGTTAAAAATTGACTGTGAC+TGG | - | chr1_2:53453787-53453806 | Msa0077010:CDS | 30.0% | |
| GTTGAGAATAAGAACTAGTA+TGG | + | chr1_2:53454029-53454048 | None:intergenic | 30.0% | |
| CTTATTCTCAACTTAATAGG+CGG | - | chr1_2:53454037-53454056 | Msa0077010:CDS | 30.0% | |
| TTAAATGCCCTTAACTGTTA+AGG | - | chr1_2:53454166-53454185 | Msa0077010:CDS | 30.0% | |
| TGTACATCCTTAACAGTTAA+GGG | + | chr1_2:53454176-53454195 | None:intergenic | 30.0% | |
| ATGTACATCCTTAACAGTTA+AGG | + | chr1_2:53454177-53454196 | None:intergenic | 30.0% | |
| ATGTACTATATCGACAAAGT+AGG | - | chr1_2:53454195-53454214 | Msa0077010:CDS | 30.0% | |
| TTGATGTTCAGCATCTATGT+CGG | + | chr1_2:53450014-53450033 | None:intergenic | 35.0% | |
| ATAGATGCTGAACATCAAGA+AGG | - | chr1_2:53450016-53450035 | Msa0077010:three_prime_UTR | 35.0% | |
| !! | TGAATCGATTTTGCAGGAAT+TGG | - | chr1_2:53450135-53450154 | Msa0077010:three_prime_UTR | 35.0% |
| AATTGGAGGATATGAAGAAG+AGG | - | chr1_2:53450152-53450171 | Msa0077010:three_prime_UTR | 35.0% | |
| TTCTGTATCTCAAGCTGAAA+AGG | - | chr1_2:53450405-53450424 | Msa0077010:intron | 35.0% | |
| AGTGCTCAAGTAGAACATTT+AGG | - | chr1_2:53450565-53450584 | Msa0077010:intron | 35.0% | |
| ! | CAATTCTGCAATCTTTTTGG+CGG | - | chr1_2:53450626-53450645 | Msa0077010:intron | 35.0% |
| CAAAGATGCACCTAAAAACT+CGG | + | chr1_2:53450655-53450674 | None:intergenic | 35.0% | |
| AAAACTAAAACAGCTTGTCG+GGG | + | chr1_2:53450868-53450887 | None:intergenic | 35.0% | |
| GAAAACTAAAACAGCTTGTC+GGG | + | chr1_2:53450869-53450888 | None:intergenic | 35.0% | |
| TGCATGTGATTGACTAATAC+TGG | - | chr1_2:53450935-53450954 | Msa0077010:intron | 35.0% | |
| !! | TTTCAACTACTTGGTGCATA+TGG | + | chr1_2:53450961-53450980 | None:intergenic | 35.0% |
| CACCAAGTAGTTGAAAACAA+CGG | - | chr1_2:53450965-53450984 | Msa0077010:intron | 35.0% | |
| AAAACTAAAACTGCCTGTTG+GGG | + | chr1_2:53451045-53451064 | None:intergenic | 35.0% | |
| CAAAACTAAAACTGCCTGTT+GGG | + | chr1_2:53451046-53451065 | None:intergenic | 35.0% | |
| TCAAAACTAAAACTGCCTGT+TGG | + | chr1_2:53451047-53451066 | None:intergenic | 35.0% | |
| ATTGATTGAACCAAAAACCC+TGG | - | chr1_2:53451078-53451097 | Msa0077010:intron | 35.0% | |
| ! | AAAAGTGAAACAGGCTGTTT+TGG | + | chr1_2:53451166-53451185 | None:intergenic | 35.0% |
| !!! | ATTGAGCATGGTTTTGTCAA+AGG | - | chr1_2:53451373-53451392 | Msa0077010:CDS | 35.0% |
| GAGGAAAACAAACTAATGCT+AGG | + | chr1_2:53451458-53451477 | None:intergenic | 35.0% | |
| !!! | GCATTAGTTTGTTTTCCTCT+TGG | - | chr1_2:53451459-53451478 | Msa0077010:CDS | 35.0% |
| !!! | TAGTTTGTTTTCCTCTTGGA+AGG | - | chr1_2:53451463-53451482 | Msa0077010:CDS | 35.0% |
| !! | AGTTTGTTTTCCTCTTGGAA+GGG | - | chr1_2:53451464-53451483 | Msa0077010:CDS | 35.0% |
| TGCTAATCACTATTGCATAG+TGG | - | chr1_2:53451552-53451571 | Msa0077010:intron | 35.0% | |
| TTACAGATCGCAGAATATAG+CGG | + | chr1_2:53451682-53451701 | None:intergenic | 35.0% | |
| ! | TTGAAACCGAAGTCCATTTT+GGG | + | chr1_2:53451788-53451807 | None:intergenic | 35.0% |
| ! | ATTGAAACCGAAGTCCATTT+TGG | + | chr1_2:53451789-53451808 | None:intergenic | 35.0% |
| ! | AATGGACTTCGGTTTCAATT+TGG | - | chr1_2:53451790-53451809 | Msa0077010:intron | 35.0% |
| ATAAGAGCTACTAGACCATT+TGG | - | chr1_2:53451832-53451851 | Msa0077010:intron | 35.0% | |
| CATTCAGGTAATCAACCAAA+TGG | + | chr1_2:53451850-53451869 | None:intergenic | 35.0% | |
| !! | ATGTTTTCAGGATCACATTC+AGG | + | chr1_2:53451865-53451884 | None:intergenic | 35.0% |
| ! | ATTGAGTCAGACATGTTTTC+AGG | + | chr1_2:53451877-53451896 | None:intergenic | 35.0% |
| TGGTTTCTTACAAGTTACCT+GGG | + | chr1_2:53451933-53451952 | None:intergenic | 35.0% | |
| TTGGTTTCTTACAAGTTACC+TGG | + | chr1_2:53451934-53451953 | None:intergenic | 35.0% | |
| ! | GTTTGGCCTAAAGTTTTCTT+TGG | + | chr1_2:53452123-53452142 | None:intergenic | 35.0% |
| CATGGACCATAAATACAGAT+AGG | + | chr1_2:53452173-53452192 | None:intergenic | 35.0% | |
| CTATCTGTATTTATGGTCCA+TGG | - | chr1_2:53452171-53452190 | Msa0077010:intron | 35.0% | |
| TTATGGTCCATGGCATAATA+TGG | - | chr1_2:53452181-53452200 | Msa0077010:intron | 35.0% | |
| ! | TGTGTGTTCAAGATTGATTC+TGG | - | chr1_2:53452311-53452330 | Msa0077010:intron | 35.0% |
| ! | GGAGTGTTAATTCATCAAAC+TGG | - | chr1_2:53452417-53452436 | Msa0077010:intron | 35.0% |
| AATCACTCCATGTTTCCATT+TGG | - | chr1_2:53452683-53452702 | Msa0077010:intron | 35.0% | |
| ! | TAAGCATATGGTGGAAAGAA+TGG | + | chr1_2:53452828-53452847 | None:intergenic | 35.0% |
| TTCTTTCCACCATATGCTTA+CGG | - | chr1_2:53452828-53452847 | Msa0077010:intron | 35.0% | |
| ! | AGGAAAGTATACAGAACATG+AGG | + | chr1_2:53453104-53453123 | None:intergenic | 35.0% |
| ! | ATGCATCCCTATGTAGTTTT+TGG | + | chr1_2:53453190-53453209 | None:intergenic | 35.0% |
| CTACAGTTAAAATGGATGGA+TGG | - | chr1_2:53453282-53453301 | Msa0077010:intron | 35.0% | |
| AGATTGTAGTCCATGCATTT+AGG | - | chr1_2:53453371-53453390 | Msa0077010:intron | 35.0% | |
| GATTGTAGTCCATGCATTTA+GGG | - | chr1_2:53453372-53453391 | Msa0077010:intron | 35.0% | |
| AAGTTACAAACACTCATGAC+AGG | - | chr1_2:53453519-53453538 | Msa0077010:intron | 35.0% | |
| TTAGAAACAACTTGTACGGA+CGG | - | chr1_2:53453582-53453601 | Msa0077010:intron | 35.0% | |
| CATTGCCACATCATTAAATG+TGG | - | chr1_2:53453705-53453724 | Msa0077010:intron | 35.0% | |
| GAGAAAGAATGACAATTAGG+AGG | + | chr1_2:53453833-53453852 | None:intergenic | 35.0% | |
| ATGAATTTCGGTGATCGAAT+TGG | - | chr1_2:53454385-53454404 | Msa0077010:five_prime_UTR | 35.0% | |
| ! | AGTTTGAAGTAGGTTTACTG+TGG | - | chr1_2:53454439-53454458 | Msa0077010:five_prime_UTR | 35.0% |
| ! | CACCGAGAGATTTTTGTCTA+TGG | + | chr1_2:53449856-53449875 | None:intergenic | 40.0% |
| TAGACAAAAATCTCTCGGTG+CGG | - | chr1_2:53449856-53449875 | Msa0077010:three_prime_UTR | 40.0% | |
| ATCCATGTCAACCTCTTCAT+CGG | + | chr1_2:53449990-53450009 | None:intergenic | 40.0% | |
| AGGGTTAGGGTTAACGAATT+AGG | - | chr1_2:53450076-53450095 | Msa0077010:three_prime_UTR | 40.0% | |
| GGGTTAGGGTTAACGAATTA+GGG | - | chr1_2:53450077-53450096 | Msa0077010:three_prime_UTR | 40.0% | |
| AGGGTTAACGAATTAGGGTT+TGG | - | chr1_2:53450082-53450101 | Msa0077010:three_prime_UTR | 40.0% | |
| GGGTTAACGAATTAGGGTTT+GGG | - | chr1_2:53450083-53450102 | Msa0077010:three_prime_UTR | 40.0% | |
| !! | ATCGATTTTGCAGGAATTGG+AGG | - | chr1_2:53450138-53450157 | Msa0077010:three_prime_UTR | 40.0% |
| AGCTAAGGTTGAGAAAGAGA+TGG | - | chr1_2:53450219-53450238 | Msa0077010:intron | 40.0% | |
| GCTAAGGTTGAGAAAGAGAT+GGG | - | chr1_2:53450220-53450239 | Msa0077010:intron | 40.0% | |
| TGTATCTCAAGCTGAAAAGG+AGG | - | chr1_2:53450408-53450427 | Msa0077010:intron | 40.0% | |
| TTTGGATTATTGGGATGGGA+TGG | - | chr1_2:53450712-53450731 | Msa0077010:intron | 40.0% | |
| TTGGATTATTGGGATGGGAT+GGG | - | chr1_2:53450713-53450732 | Msa0077010:intron | 40.0% | |
| !! | GGGCTGAATGTTCTAGAAAA+GGG | + | chr1_2:53450848-53450867 | None:intergenic | 40.0% |
| !! | GACCGTTGTTTTCAACTACT+TGG | + | chr1_2:53450970-53450989 | None:intergenic | 40.0% |
| TTGAACCAAAAACCCTGGTA+TGG | - | chr1_2:53451083-53451102 | Msa0077010:intron | 40.0% | |
| CATAAGTACCTACCATACCA+GGG | + | chr1_2:53451098-53451117 | None:intergenic | 40.0% | |
| TTGGAAGGGACATGTTATCA+GGG | - | chr1_2:53451478-53451497 | Msa0077010:intron | 40.0% | |
| AAGCATTACCATGCAGTACA+GGG | + | chr1_2:53452046-53452065 | None:intergenic | 40.0% | |
| ! | AAAGCATTACCATGCAGTAC+AGG | + | chr1_2:53452047-53452066 | None:intergenic | 40.0% |
| GGGAGACCAAAGAAAACTTT+AGG | - | chr1_2:53452114-53452133 | Msa0077010:intron | 40.0% | |
| AACGACACCATATTATGCCA+TGG | + | chr1_2:53452191-53452210 | None:intergenic | 40.0% | |
| ! | TGTCGTTTGATCCATGTAGT+CGG | - | chr1_2:53452204-53452223 | Msa0077010:intron | 40.0% |
| AAATGCTGTTGGACTTCTTC+AGG | + | chr1_2:53452480-53452499 | None:intergenic | 40.0% | |
| GACAAATTTGGTCAACCGAA+AGG | - | chr1_2:53452540-53452559 | Msa0077010:intron | 40.0% | |
| GCAAAACGTACAAATGTTCC+TGG | - | chr1_2:53452741-53452760 | Msa0077010:intron | 40.0% | |
| TCTTTCCACCATATGCTTAC+GGG | - | chr1_2:53452829-53452848 | Msa0077010:intron | 40.0% | |
| GATAGTTACCCGTAAGCATA+TGG | + | chr1_2:53452840-53452859 | None:intergenic | 40.0% | |
| CATTAACAAGCACGCTTATG+TGG | + | chr1_2:53453074-53453093 | None:intergenic | 40.0% | |
| ! | TCCTTGCAAGTGTACTTTTG+TGG | - | chr1_2:53453120-53453139 | Msa0077010:intron | 40.0% |
| ! | CCTTGCAAGTGTACTTTTGT+GGG | - | chr1_2:53453121-53453140 | Msa0077010:intron | 40.0% |
| CAGCAACAACACTAACTGAA+TGG | - | chr1_2:53453253-53453272 | Msa0077010:intron | 40.0% | |
| ! | ACTGGATCAACAGTAGGTTT+TGG | - | chr1_2:53453805-53453824 | Msa0077010:CDS | 40.0% |
| AGAACTAGTATGGCCTGTAT+CGG | + | chr1_2:53454019-53454038 | None:intergenic | 40.0% | |
| ! | CACGAAGCTTCTTTTTACAC+AGG | - | chr1_2:53454140-53454159 | Msa0077010:intron | 40.0% |
| TCAATGACTCAGGGAAAATG+AGG | + | chr1_2:53454228-53454247 | None:intergenic | 40.0% | |
| ! | TCATTTTCCCTGAGTCATTG+AGG | - | chr1_2:53454227-53454246 | Msa0077010:CDS | 40.0% |
| AGGTAAACCTCAATGACTCA+GGG | + | chr1_2:53454237-53454256 | None:intergenic | 40.0% | |
| TCGAATTGGTTATGTGCTGT+TGG | - | chr1_2:53454399-53454418 | Msa0077010:five_prime_UTR | 40.0% | |
| GAACGACAAGGAGAAGAAGA+AGG | - | chr1_2:53449895-53449914 | Msa0077010:three_prime_UTR | 45.0% | |
| AGACGATAGAGTAGCGAAGA+TGG | - | chr1_2:53449928-53449947 | Msa0077010:three_prime_UTR | 45.0% | |
| ! | CAGGAAGAGCACGAAGTTTA+TGG | - | chr1_2:53449953-53449972 | Msa0077010:three_prime_UTR | 45.0% |
| TCCATGTCAACCTCTTCATC+GGG | + | chr1_2:53449989-53450008 | None:intergenic | 45.0% | |
| CAATCACACCACCAAGGTTA+GGG | - | chr1_2:53450057-53450076 | Msa0077010:three_prime_UTR | 45.0% | |
| GTTAACCCTAACCCTAACCT+TGG | + | chr1_2:53450071-53450090 | None:intergenic | 45.0% | |
| TCTTCGCGAAATGCAAGCTA+AGG | - | chr1_2:53450204-53450223 | Msa0077010:CDS | 45.0% | |
| TCAAGCTGAAAAGGAGGAAG+TGG | - | chr1_2:53450414-53450433 | Msa0077010:intron | 45.0% | |
| GATGCTCGATCGATCTATGT+TGG | - | chr1_2:53450436-53450455 | Msa0077010:intron | 45.0% | |
| ! | TTGGCGGTTTCCGAGTTTTT+AGG | - | chr1_2:53450642-53450661 | Msa0077010:intron | 45.0% |
| !! | GGGGCTGAATGTTCTAGAAA+AGG | + | chr1_2:53450849-53450868 | None:intergenic | 45.0% |
| TTAGAACATTTGGCCCCAAC+AGG | - | chr1_2:53451029-53451048 | Msa0077010:intron | 45.0% | |
| ACCAAAAACCCTGGTATGGT+AGG | - | chr1_2:53451087-53451106 | Msa0077010:intron | 45.0% | |
| ! | ACCTACCATACCAGGGTTTT+TGG | + | chr1_2:53451091-53451110 | None:intergenic | 45.0% |
| CCATAAGTACCTACCATACC+AGG | + | chr1_2:53451099-53451118 | None:intergenic | 45.0% | |
| CCTGGTATGGTAGGTACTTA+TGG | - | chr1_2:53451096-53451115 | Msa0077010:intron | 45.0% | |
| AGTGTGTGGAATGGTTGAGA+TGG | - | chr1_2:53451204-53451223 | Msa0077010:intron | 45.0% | |
| GTGTGTGGAATGGTTGAGAT+GGG | - | chr1_2:53451205-53451224 | Msa0077010:intron | 45.0% | |
| GAATGGTTGAGATGGGAAAG+AGG | - | chr1_2:53451212-53451231 | Msa0077010:intron | 45.0% | |
| GAGATGGGAAAGAGGTTGTA+TGG | - | chr1_2:53451220-53451239 | Msa0077010:intron | 45.0% | |
| GTGTTGTACATGTAGCCAGT+TGG | - | chr1_2:53451318-53451337 | Msa0077010:intron | 45.0% | |
| GTACATGTAGCCAGTTGGTT+TGG | - | chr1_2:53451323-53451342 | Msa0077010:intron | 45.0% | |
| !! | TGTAGCCAGTTGGTTTGGTT+TGG | - | chr1_2:53451328-53451347 | Msa0077010:intron | 45.0% |
| GATAACATGTCCCTTCCAAG+AGG | + | chr1_2:53451477-53451496 | None:intergenic | 45.0% | |
| CTTGGAAGGGACATGTTATC+AGG | - | chr1_2:53451477-53451496 | Msa0077010:intron | 45.0% | |
| GCTGTGCTATAGCATTGTTG+CGG | - | chr1_2:53451644-53451663 | Msa0077010:CDS | 45.0% | |
| CACAGGACTGAAAATGCTGT+TGG | + | chr1_2:53452491-53452510 | None:intergenic | 45.0% | |
| ! | CAACAGCATTTTCAGTCCTG+TGG | - | chr1_2:53452489-53452508 | Msa0077010:intron | 45.0% |
| ! | TACGTTTTGCAGACACCTGA+AGG | + | chr1_2:53452731-53452750 | None:intergenic | 45.0% |
| GTTCCTGGATTGAAGCAGTA+CGG | - | chr1_2:53452756-53452775 | Msa0077010:intron | 45.0% | |
| AAGAATGGTGCAGGCATGAA+AGG | + | chr1_2:53452813-53452832 | None:intergenic | 45.0% | |
| ! | TATGGTGGAAAGAATGGTGC+AGG | + | chr1_2:53452822-53452841 | None:intergenic | 45.0% |
| AGTTACCCGTAAGCATATGG+TGG | + | chr1_2:53452837-53452856 | None:intergenic | 45.0% | |
| ! | CCCACAAAAGTACACTTGCA+AGG | + | chr1_2:53453124-53453143 | None:intergenic | 45.0% |
| ! | CAAGTGTACTTTTGTGGGCA+GGG | - | chr1_2:53453126-53453145 | Msa0077010:intron | 45.0% |
| ! | TCAGTTAGTGTTGTTGCTGC+AGG | + | chr1_2:53453252-53453271 | None:intergenic | 45.0% |
| ATCTTGTGTGCCTGCTATCA+TGG | - | chr1_2:53453347-53453366 | Msa0077010:intron | 45.0% | |
| CTACAATCTGCCATGATAGC+AGG | + | chr1_2:53453360-53453379 | None:intergenic | 45.0% | |
| TGTAGTCCATGCATTTAGGG+TGG | - | chr1_2:53453375-53453394 | Msa0077010:intron | 45.0% | |
| CCAAAACCACCCTAAATGCA+TGG | + | chr1_2:53453384-53453403 | None:intergenic | 45.0% | |
| !! | CCATGCATTTAGGGTGGTTT+TGG | - | chr1_2:53453381-53453400 | Msa0077010:intron | 45.0% |
| ACTGTGACTGGATCAACAGT+AGG | - | chr1_2:53453799-53453818 | Msa0077010:CDS | 45.0% | |
| GAACTAGTATGGCCTGTATC+GGG | + | chr1_2:53454018-53454037 | None:intergenic | 45.0% | |
| CAGGTAAACCTCAATGACTC+AGG | + | chr1_2:53454238-53454257 | None:intergenic | 45.0% | |
| GAGGTTTACCTGTGCAATAG+TGG | - | chr1_2:53454246-53454265 | Msa0077010:CDS | 45.0% | |
| GTTTACCTGTGCAATAGTGG+AGG | - | chr1_2:53454249-53454268 | Msa0077010:CDS | 45.0% | |
| ! | AATAGTGGAGGCAACTATGC+AGG | - | chr1_2:53454261-53454280 | Msa0077010:exon | 45.0% |
| ! | ATAGTGGAGGCAACTATGCA+GGG | - | chr1_2:53454262-53454281 | Msa0077010:exon | 45.0% |
| !! | TATTAAAAGAATATTATAAA+AGG | - | chr1_2:53449807-53449826 | Msa0077010:three_prime_UTR | 5.0% |
| !! | ATTAAAAGAATATTATAAAA+GGG | - | chr1_2:53449808-53449827 | Msa0077010:three_prime_UTR | 5.0% |
| GAGAGAGTGAGAGAACGACA+AGG | - | chr1_2:53449883-53449902 | Msa0077010:three_prime_UTR | 50.0% | |
| TAGAGTAGCGAAGATGGAGC+AGG | - | chr1_2:53449934-53449953 | Msa0077010:three_prime_UTR | 50.0% | |
| TGCTGACATTCCCGATGAAG+AGG | - | chr1_2:53449976-53449995 | Msa0077010:three_prime_UTR | 50.0% | |
| TCCCGATGAAGAGGTTGACA+TGG | - | chr1_2:53449985-53450004 | Msa0077010:three_prime_UTR | 50.0% | |
| !! | CCTAACCTTGGTGGTGTGAT+TGG | + | chr1_2:53450059-53450078 | None:intergenic | 50.0% |
| CCAATCACACCACCAAGGTT+AGG | - | chr1_2:53450056-53450075 | Msa0077010:three_prime_UTR | 50.0% | |
| ACACCACCAAGGTTAGGGTT+AGG | - | chr1_2:53450062-53450081 | Msa0077010:three_prime_UTR | 50.0% | |
| CACCACCAAGGTTAGGGTTA+GGG | - | chr1_2:53450063-53450082 | Msa0077010:three_prime_UTR | 50.0% | |
| AACCCTAACCCTAACCTTGG+TGG | + | chr1_2:53450068-53450087 | None:intergenic | 50.0% | |
| GAAGAGGCTGAAAGAGATCG+AGG | - | chr1_2:53450168-53450187 | Msa0077010:exon | 50.0% | |
| ! | AAAGAGATGGGCGCTGTTCA+AGG | - | chr1_2:53450232-53450251 | Msa0077010:intron | 50.0% |
| TGAGATACAGAAGACCCAGC+AGG | + | chr1_2:53450397-53450416 | None:intergenic | 50.0% | |
| TCGCTCCAAACCAAACCAAC+TGG | + | chr1_2:53451336-53451355 | None:intergenic | 50.0% | |
| !! | GTTTGGTTTGGAGCGAGTCT+GGG | - | chr1_2:53451340-53451359 | Msa0077010:intron | 50.0% |
| ATGCAGTACAGGGCTGATGA+AGG | + | chr1_2:53452036-53452055 | None:intergenic | 50.0% | |
| TTCATCAGCCCTGTACTGCA+TGG | - | chr1_2:53452035-53452054 | Msa0077010:intron | 50.0% | |
| !! | CTACCAAAGCTTTTTCCCGC+AGG | + | chr1_2:53452235-53452254 | None:intergenic | 50.0% |
| GACTCTGTTCACAGTACCAC+AGG | + | chr1_2:53452508-53452527 | None:intergenic | 50.0% | |
| CTTCCGTACTGCTTCAATCC+AGG | + | chr1_2:53452762-53452781 | None:intergenic | 50.0% | |
| ! | GCAAGTGTACTTTTGTGGGC+AGG | - | chr1_2:53453125-53453144 | Msa0077010:intron | 50.0% |
| TATCTCGGAACCCTTCTGCA+TGG | + | chr1_2:53453984-53454003 | None:intergenic | 50.0% | |
| CGGGTGGGTCTTCTATATCT+CGG | + | chr1_2:53453999-53454018 | None:intergenic | 50.0% | |
| ATAGAAGACCCACCCGATAC+AGG | - | chr1_2:53454003-53454022 | Msa0077010:CDS | 50.0% | |
| TAGTATGGCCTGTATCGGGT+GGG | + | chr1_2:53454014-53454033 | None:intergenic | 50.0% | |
| AGTTGCCTCCACTATTGCAC+AGG | + | chr1_2:53454257-53454276 | None:intergenic | 50.0% | |
| CGCATCCAATCACACCACCA+AGG | - | chr1_2:53450051-53450070 | Msa0077010:three_prime_UTR | 55.0% | |
| !! | GGTTTGGTTTGGAGCGAGTC+TGG | - | chr1_2:53451339-53451358 | Msa0077010:intron | 55.0% |
| ! | CATGTAGTCGGTTCCACCTG+CGG | - | chr1_2:53452216-53452235 | Msa0077010:intron | 55.0% |
| ! | ATGTAGTCGGTTCCACCTGC+GGG | - | chr1_2:53452217-53452236 | Msa0077010:intron | 55.0% |
| !! | CCAAAGCTTTTTCCCGCAGG+TGG | + | chr1_2:53452232-53452251 | None:intergenic | 55.0% |
| CCACCTGCGGGAAAAAGCTT+TGG | - | chr1_2:53452229-53452248 | Msa0077010:intron | 55.0% | |
| ATTGCATGGCCGACAGCTGA+AGG | - | chr1_2:53452629-53452648 | Msa0077010:intron | 55.0% | |
| CAGTACGGAAGAAGACCTGC+TGG | - | chr1_2:53452771-53452790 | Msa0077010:intron | 55.0% | |
| !! | AGAAGACCTGCTGGTTTCCG+CGG | - | chr1_2:53452780-53452799 | Msa0077010:intron | 55.0% |
| CTAGTATGGCCTGTATCGGG+TGG | + | chr1_2:53454015-53454034 | None:intergenic | 55.0% | |
| CGCAGGTGGAACCGACTACA+TGG | + | chr1_2:53452218-53452237 | None:intergenic | 60.0% | |
| GCATGAAAGGCCTCCTACCG+CGG | + | chr1_2:53452800-53452819 | None:intergenic | 60.0% | |
| !! | GACCTGCTGGTTTCCGCGGT+AGG | - | chr1_2:53452784-53452803 | Msa0077010:intron | 65.0% |
| CTCCTACCGCGGAAACCAGC+AGG | + | chr1_2:53452789-53452808 | None:intergenic | 65.0% | |
| !! | CTGCTGGTTTCCGCGGTAGG+AGG | - | chr1_2:53452787-53452806 | Msa0077010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 53449739 | 53454479 | 53449739 | ID=Msa0077010;Name=Msa0077010 |
| chr1_2 | mRNA | 53449739 | 53454479 | 53449739 | ID=Msa0077010-mRNA-1;Parent=Msa0077010;Name=Msa0077010-mRNA-1;_AED=0.10;_eAED=0.10;_QI=208|1|1|1|0.8|0.66|6|445|217 |
| chr1_2 | exon | 53449739 | 53450229 | 53449739 | ID=Msa0077010-mRNA-1:exon:16582;Parent=Msa0077010-mRNA-1 |
| chr1_2 | exon | 53451368 | 53451483 | 53451368 | ID=Msa0077010-mRNA-1:exon:16581;Parent=Msa0077010-mRNA-1 |
| chr1_2 | exon | 53451568 | 53451759 | 53451568 | ID=Msa0077010-mRNA-1:exon:16580;Parent=Msa0077010-mRNA-1 |
| chr1_2 | exon | 53453756 | 53453826 | 53453756 | ID=Msa0077010-mRNA-1:exon:16579;Parent=Msa0077010-mRNA-1 |
| chr1_2 | exon | 53453965 | 53454067 | 53453965 | ID=Msa0077010-mRNA-1:exon:16578;Parent=Msa0077010-mRNA-1 |
| chr1_2 | exon | 53454146 | 53454479 | 53454146 | ID=Msa0077010-mRNA-1:exon:16577;Parent=Msa0077010-mRNA-1 |
| chr1_2 | five_prime_UTR | 53454272 | 53454479 | 53454272 | ID=Msa0077010-mRNA-1:five_prime_utr;Parent=Msa0077010-mRNA-1 |
| chr1_2 | CDS | 53454146 | 53454271 | 53454146 | ID=Msa0077010-mRNA-1:cds;Parent=Msa0077010-mRNA-1 |
| chr1_2 | CDS | 53453965 | 53454067 | 53453965 | ID=Msa0077010-mRNA-1:cds;Parent=Msa0077010-mRNA-1 |
| chr1_2 | CDS | 53453756 | 53453826 | 53453756 | ID=Msa0077010-mRNA-1:cds;Parent=Msa0077010-mRNA-1 |
| chr1_2 | CDS | 53451568 | 53451759 | 53451568 | ID=Msa0077010-mRNA-1:cds;Parent=Msa0077010-mRNA-1 |
| chr1_2 | CDS | 53451368 | 53451483 | 53451368 | ID=Msa0077010-mRNA-1:cds;Parent=Msa0077010-mRNA-1 |
| chr1_2 | CDS | 53450184 | 53450229 | 53450184 | ID=Msa0077010-mRNA-1:cds;Parent=Msa0077010-mRNA-1 |
| chr1_2 | three_prime_UTR | 53449739 | 53450183 | 53449739 | ID=Msa0077010-mRNA-1:three_prime_utr;Parent=Msa0077010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
