Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630440 | XP_013454867.1 | 99.555 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630440 | sp|P29500|TBB1_PEA | 99.333 | 450 | 2 | 1 | 1 | 449 | 1 | 450 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630440 | A0A072USS0 | 99.555 | 449 | 2 | 0 | 1 | 449 | 1 | 449 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0630440 | 0.805452 | 1.325886e-49 | -8.615850e-47 |
| Msa0001800 | Msa0630440 | 0.800574 | 1.352227e-48 | -8.615850e-47 |
| Msa0006840 | Msa0630440 | 0.802330 | 5.906338e-49 | -8.615850e-47 |
| Msa0013270 | Msa0630440 | 0.818583 | 1.817388e-52 | -8.615850e-47 |
| Msa0021290 | Msa0630440 | 0.815828 | 7.567214e-52 | -8.615850e-47 |
| Msa0021320 | Msa0630440 | 0.822842 | 1.907619e-53 | -8.615850e-47 |
| Msa0027800 | Msa0630440 | 0.806732 | 7.130113e-50 | -8.615850e-47 |
| Msa0033220 | Msa0630440 | 0.813849 | 2.078480e-51 | -8.615850e-47 |
| Msa0036810 | Msa0630440 | 0.802502 | 5.442755e-49 | -8.615850e-47 |
| Msa0037050 | Msa0630440 | 0.803552 | 3.300683e-49 | -8.615850e-47 |
| Msa0037660 | Msa0630440 | 0.829463 | 5.075421e-55 | -8.615850e-47 |
| Msa0044780 | Msa0630440 | -0.823652 | 1.234224e-53 | -8.615850e-47 |
| Msa0045620 | Msa0630440 | 0.802339 | 5.879911e-49 | -8.615850e-47 |
| Msa0045810 | Msa0630440 | 0.832470 | 9.281558e-56 | -8.615850e-47 |
| Msa0046200 | Msa0630440 | 0.815253 | 1.016536e-51 | -8.615850e-47 |
| Msa0050150 | Msa0630440 | 0.837068 | 6.464161e-57 | -8.615850e-47 |
| Msa0050530 | Msa0630440 | 0.815100 | 1.098928e-51 | -8.615850e-47 |
| Msa0063190 | Msa0630440 | 0.824000 | 1.022984e-53 | -8.615850e-47 |
| Msa0078130 | Msa0630440 | 0.809372 | 1.954425e-50 | -8.615850e-47 |
| Msa0079880 | Msa0630440 | 0.821861 | 3.223675e-53 | -8.615850e-47 |
| Msa0080030 | Msa0630440 | 0.826744 | 2.293040e-54 | -8.615850e-47 |
| Msa0080370 | Msa0630440 | 0.822410 | 2.404194e-53 | -8.615850e-47 |
| Msa0089940 | Msa0630440 | 0.809581 | 1.762919e-50 | -8.615850e-47 |
| Msa0100600 | Msa0630440 | 0.840879 | 6.663523e-58 | -8.615850e-47 |
| Msa0100890 | Msa0630440 | 0.819866 | 9.275088e-53 | -8.615850e-47 |
| Msa0106540 | Msa0630440 | 0.807044 | 6.125919e-50 | -8.615850e-47 |
| Msa0108630 | Msa0630440 | 0.862525 | 4.766164e-64 | -8.615850e-47 |
| Msa0607800 | Msa0630440 | 0.827222 | 1.762755e-54 | -8.615850e-47 |
| Msa0610690 | Msa0630440 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0617940 | Msa0630440 | 0.819434 | 1.163730e-52 | -8.615850e-47 |
| Msa0618840 | Msa0630440 | 0.805415 | 1.349677e-49 | -8.615850e-47 |
| Msa0618990 | Msa0630440 | 0.836127 | 1.122592e-56 | -8.615850e-47 |
| Msa0620500 | Msa0630440 | 0.815523 | 8.849965e-52 | -8.615850e-47 |
| Msa0620510 | Msa0630440 | 0.836967 | 6.860471e-57 | -8.615850e-47 |
| Msa0623310 | Msa0630440 | 0.815290 | 9.972973e-52 | -8.615850e-47 |
| Msa0625620 | Msa0630440 | 0.824881 | 6.347039e-54 | -8.615850e-47 |
| Msa0630440 | Msa0640800 | 0.804719 | 1.887259e-49 | -8.615850e-47 |
| Msa0630440 | Msa0642550 | 0.816594 | 5.102294e-52 | -8.615850e-47 |
| Msa0630440 | Msa0646010 | 0.804447 | 2.150711e-49 | -8.615850e-47 |
| Msa0630440 | Msa0646260 | 0.813325 | 2.709734e-51 | -8.615850e-47 |
| Msa0630440 | Msa0646430 | 0.808437 | 3.098502e-50 | -8.615850e-47 |
| Msa0630440 | Msa0647440 | 0.821318 | 4.304104e-53 | -8.615850e-47 |
| Msa0630440 | Msa0648040 | 0.842040 | 3.296376e-58 | -8.615850e-47 |
| Msa0630440 | Msa0661480 | 0.828871 | 7.063674e-55 | -8.615850e-47 |
| Msa0630440 | Msa0663290 | 0.829353 | 5.397287e-55 | -8.615850e-47 |
| Msa0630440 | Msa0664070 | 0.831273 | 1.833087e-55 | -8.615850e-47 |
| Msa0630440 | Msa0687090 | 0.808344 | 3.243412e-50 | -8.615850e-47 |
| Msa0630440 | Msa0687370 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0630440 | Msa0688380 | 0.819045 | 1.427494e-52 | -8.615850e-47 |
| Msa0630440 | Msa0689660 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
| Msa0630440 | Msa0689830 | 0.868493 | 6.268577e-66 | -8.615850e-47 |
| Msa0630440 | Msa0690740 | 0.839813 | 1.265468e-57 | -8.615850e-47 |
| Msa0630440 | Msa0692790 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa0630440 | Msa0701090 | -0.801746 | 7.783969e-49 | -8.615850e-47 |
| Msa0630440 | Msa0703950 | 0.816066 | 6.696749e-52 | -8.615850e-47 |
| Msa0630440 | Msa0704690 | 0.819239 | 1.289245e-52 | -8.615850e-47 |
| Msa0630440 | Msa0707260 | 0.869395 | 3.196738e-66 | -8.615850e-47 |
| Msa0630440 | Msa0707360 | 0.819199 | 1.316777e-52 | -8.615850e-47 |
| Msa0630440 | Msa0708020 | 0.804980 | 1.664907e-49 | -8.615850e-47 |
| Msa0630440 | Msa0708980 | 0.804741 | 1.867241e-49 | -8.615850e-47 |
| Msa0630440 | Msa0713080 | 0.844539 | 7.101804e-59 | -8.615850e-47 |
| Msa0630440 | Msa0717900 | 0.816051 | 6.748465e-52 | -8.615850e-47 |
| Msa0630440 | Msa0719270 | 0.857592 | 1.469427e-62 | -8.615850e-47 |
| Msa0630440 | Msa0726170 | -0.823103 | 1.658521e-53 | -8.615850e-47 |
| Msa0630440 | Msa0732970 | 0.803525 | 3.344640e-49 | -8.615850e-47 |
| Msa0630440 | Msa0745140 | 0.822305 | 2.542965e-53 | -8.615850e-47 |
| Msa0630440 | Msa0746650 | 0.827674 | 1.373500e-54 | -8.615850e-47 |
| Msa0630440 | Msa0751720 | 0.817475 | 3.235204e-52 | -8.615850e-47 |
| Msa0630440 | Msa0758780 | -0.815719 | 8.005047e-52 | -8.615850e-47 |
| Msa0630440 | Msa0758810 | -0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0630440 | Msa0761830 | 0.811634 | 6.348388e-51 | -8.615850e-47 |
| Msa0630440 | Msa0774060 | 0.834352 | 3.149111e-56 | -8.615850e-47 |
| Msa0630440 | Msa0775660 | 0.811708 | 6.115312e-51 | -8.615850e-47 |
| Msa0630440 | Msa0776640 | 0.823534 | 1.315401e-53 | -8.615850e-47 |
| Msa0630440 | Msa0778600 | 0.801977 | 6.980180e-49 | -8.615850e-47 |
| Msa0630440 | Msa0804170 | 0.809400 | 1.927612e-50 | -8.615850e-47 |
| Msa0630440 | Msa0811690 | 0.813877 | 2.048600e-51 | -8.615850e-47 |
| Msa0630440 | Msa0816080 | 0.807641 | 4.578113e-50 | -8.615850e-47 |
| Msa0630440 | Msa0825920 | 0.824337 | 8.527420e-54 | -8.615850e-47 |
| Msa0630440 | Msa0827370 | 0.855049 | 8.186275e-62 | -8.615850e-47 |
| Msa0630440 | Msa0837680 | 0.850413 | 1.726093e-60 | -8.615850e-47 |
| Msa0630440 | Msa0838620 | -0.822860 | 1.889664e-53 | -8.615850e-47 |
| Msa0630440 | Msa0840520 | 0.853642 | 2.087500e-61 | -8.615850e-47 |
| Msa0630440 | Msa0846900 | 0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa0630440 | Msa0851850 | 0.830898 | 2.266175e-55 | -8.615850e-47 |
| Msa0630440 | Msa0861440 | 0.843342 | 1.486480e-58 | -8.615850e-47 |
| Msa0630440 | Msa0865420 | 0.822193 | 2.699952e-53 | -8.615850e-47 |
| Msa0630440 | Msa0866530 | 0.811909 | 5.530747e-51 | -8.615850e-47 |
| Msa0630440 | Msa0870020 | 0.835979 | 1.223777e-56 | -8.615850e-47 |
| Msa0630440 | Msa0880910 | 0.829330 | 5.469519e-55 | -8.615850e-47 |
| Msa0630440 | Msa0891700 | 0.830485 | 2.860397e-55 | -8.615850e-47 |
| Msa0630440 | Msa0900090 | 0.814581 | 1.432333e-51 | -8.615850e-47 |
| Msa0630440 | Msa0903340 | 0.838088 | 3.539630e-57 | -8.615850e-47 |
| Msa0630440 | Msa0926310 | 0.815604 | 8.489800e-52 | -8.615850e-47 |
| Msa0630440 | Msa0930040 | 0.838067 | 3.583224e-57 | -8.615850e-47 |
| Msa0630440 | Msa0930770 | 0.850528 | 1.602402e-60 | -8.615850e-47 |
| Msa0630440 | Msa0944010 | 0.811088 | 8.338886e-51 | -8.615850e-47 |
| Msa0630440 | Msa0945900 | 0.813456 | 2.536829e-51 | -8.615850e-47 |
| Msa0630440 | Msa0956350 | 0.802946 | 4.407186e-49 | -8.615850e-47 |
| Msa0630440 | Msa0966120 | 0.803865 | 2.842605e-49 | -8.615850e-47 |
| Msa0630440 | Msa0967780 | 0.841811 | 3.789170e-58 | -8.615850e-47 |
| Msa0630440 | Msa0976380 | 0.825731 | 3.995470e-54 | -8.615850e-47 |
| Msa0630440 | Msa0982730 | 0.829656 | 4.556379e-55 | -8.615850e-47 |
| Msa0630440 | Msa1000780 | 0.810238 | 1.272892e-50 | -8.615850e-47 |
| Msa0630440 | Msa1008850 | 0.809083 | 2.254130e-50 | -8.615850e-47 |
| Msa0630440 | Msa1019180 | 0.830789 | 2.409319e-55 | -8.615850e-47 |
| Msa0630440 | Msa1019200 | 0.836928 | 7.018687e-57 | -8.615850e-47 |
| Msa0630440 | Msa1021560 | 0.844919 | 5.611405e-59 | -8.615850e-47 |
| Msa0630440 | Msa1022420 | 0.827145 | 1.838676e-54 | -8.615850e-47 |
| Msa0630440 | Msa1025200 | 0.810288 | 1.241809e-50 | -8.615850e-47 |
| Msa0630440 | Msa1029840 | 0.802970 | 4.356594e-49 | -8.615850e-47 |
| Msa0630440 | Msa1038860 | 0.806817 | 6.840786e-50 | -8.615850e-47 |
| Msa0630440 | Msa1041060 | 0.807228 | 5.600182e-50 | -8.615850e-47 |
| Msa0630440 | Msa1041370 | 0.808771 | 2.628911e-50 | -8.615850e-47 |
| Msa0630440 | Msa1044250 | 0.820953 | 5.223066e-53 | -8.615850e-47 |
| Msa0630440 | Msa1049910 | 0.808786 | 2.609388e-50 | -8.615850e-47 |
| Msa0630440 | Msa1050260 | 0.844244 | 8.523841e-59 | -8.615850e-47 |
| Msa0630440 | Msa1052730 | 0.808084 | 3.684240e-50 | -8.615850e-47 |
| Msa0630440 | Msa1081270 | 0.818490 | 1.907483e-52 | -8.615850e-47 |
| Msa0630440 | Msa1082410 | 0.822291 | 2.562456e-53 | -8.615850e-47 |
| Msa0630440 | Msa1085680 | 0.801206 | 1.004240e-48 | -8.615850e-47 |
| Msa0630440 | Msa1102060 | -0.800729 | 1.257343e-48 | -8.615850e-47 |
| Msa0630440 | Msa1104110 | 0.851424 | 8.953920e-61 | -8.615850e-47 |
| Msa0630440 | Msa1115600 | 0.808462 | 3.061369e-50 | -8.615850e-47 |
| Msa0630440 | Msa1118170 | 0.811234 | 7.752943e-51 | -8.615850e-47 |
| Msa0630440 | Msa1124210 | 0.845063 | 5.129660e-59 | -8.615850e-47 |
| Msa0630440 | Msa1147700 | 0.870325 | 1.589137e-66 | -8.615850e-47 |
| Msa0630440 | Msa1148930 | 0.803019 | 4.257496e-49 | -8.615850e-47 |
| Msa0630440 | Msa1149910 | 0.804337 | 2.267105e-49 | -8.615850e-47 |
| Msa0630440 | Msa1155100 | 0.807123 | 5.894459e-50 | -8.615850e-47 |
| Msa0630440 | Msa1159590 | 0.800099 | 1.689272e-48 | -8.615850e-47 |
| Msa0630440 | Msa1163180 | 0.806458 | 8.146026e-50 | -8.615850e-47 |
| Msa0630440 | Msa1165460 | 0.820496 | 6.653320e-53 | -8.615850e-47 |
| Msa0630440 | Msa1183900 | 0.810604 | 1.061440e-50 | -8.615850e-47 |
| Msa0630440 | Msa1183910 | 0.820539 | 6.503744e-53 | -8.615850e-47 |
| Msa0630440 | Msa1188340 | 0.820798 | 5.671321e-53 | -8.615850e-47 |
| Msa0630440 | Msa1190770 | 0.801374 | 9.280693e-49 | -8.615850e-47 |
| Msa0630440 | Msa1192360 | 0.817813 | 2.713845e-52 | -8.615850e-47 |
| Msa0630440 | Msa1199850 | 0.839881 | 1.214920e-57 | -8.615850e-47 |
| Msa0630440 | Msa1201170 | 0.829493 | 4.992150e-55 | -8.615850e-47 |
| Msa0630440 | Msa1201780 | 0.834791 | 2.443859e-56 | -8.615850e-47 |
| Msa0630440 | Msa1206040 | 0.851011 | 1.171499e-60 | -8.615850e-47 |
| Msa0630440 | Msa1215980 | 0.814373 | 1.592456e-51 | -8.615850e-47 |
| Msa0630440 | Msa1215990 | 0.834375 | 3.108682e-56 | -8.615850e-47 |
| Msa0630440 | Msa1217890 | 0.828772 | 7.464952e-55 | -8.615850e-47 |
| Msa0630440 | Msa1220580 | 0.852419 | 4.673132e-61 | -8.615850e-47 |
| Msa0630440 | Msa1226370 | 0.829209 | 5.849147e-55 | -8.615850e-47 |
| Msa0630440 | Msa1228580 | 0.801779 | 7.665167e-49 | -8.615850e-47 |
| Msa0630440 | Msa1240940 | 0.849734 | 2.674366e-60 | -8.615850e-47 |
| Msa0630440 | Msa1254100 | 0.830150 | 3.453726e-55 | -8.615850e-47 |
| Msa0630440 | Msa1254420 | 0.810415 | 1.166196e-50 | -8.615850e-47 |
| Msa0630440 | Msa1254540 | 0.801067 | 1.072407e-48 | -8.615850e-47 |
| Msa0630440 | Msa1255710 | 0.810884 | 9.232368e-51 | -8.615850e-47 |
| Msa0630440 | Msa1257200 | 0.803517 | 3.357139e-49 | -8.615850e-47 |
| Msa0630440 | Msa1262590 | 0.802551 | 5.316001e-49 | -8.615850e-47 |
| Msa0630440 | Msa1263740 | 0.804762 | 1.848469e-49 | -8.615850e-47 |
| Msa0630440 | Msa1277110 | 0.814076 | 1.852220e-51 | -8.615850e-47 |
| Msa0630440 | Msa1279120 | 0.810119 | 1.350377e-50 | -8.615850e-47 |
| Msa0630440 | Msa1282300 | 0.863609 | 2.202958e-64 | -8.615850e-47 |
| Msa0630440 | Msa1294280 | 0.857288 | 1.807625e-62 | -8.615850e-47 |
| Msa0630440 | Msa1294790 | 0.809465 | 1.867065e-50 | -8.615850e-47 |
| Msa0630440 | Msa1297070 | 0.830299 | 3.176087e-55 | -8.615850e-47 |
| Msa0630440 | Msa1301820 | 0.805493 | 1.299705e-49 | -8.615850e-47 |
| Msa0630440 | Msa1301830 | 0.813110 | 3.021413e-51 | -8.615850e-47 |
| Msa0630440 | Msa1308850 | 0.806787 | 6.943020e-50 | -8.615850e-47 |
| Msa0630440 | Msa1308860 | 0.808609 | 2.847532e-50 | -8.615850e-47 |
| Msa0630440 | Msa1315500 | 0.823005 | 1.748527e-53 | -8.615850e-47 |
| Msa0630440 | Msa1322960 | 0.802393 | 5.732005e-49 | -8.615850e-47 |
| Msa0630440 | Msa1328280 | 0.814839 | 1.255940e-51 | -8.615850e-47 |
| Msa0630440 | Msa1328870 | 0.849301 | 3.531380e-60 | -8.615850e-47 |
| Msa0630440 | Msa1332950 | 0.806614 | 7.551412e-50 | -8.615850e-47 |
| Msa0630440 | Msa1334560 | 0.854761 | 9.926238e-62 | -8.615850e-47 |
| Msa0630440 | Msa1342760 | 0.809616 | 1.732481e-50 | -8.615850e-47 |
| Msa0630440 | Msa1347390 | 0.808928 | 2.433571e-50 | -8.615850e-47 |
| Msa0630440 | Msa1352580 | 0.823603 | 1.267517e-53 | -8.615850e-47 |
| Msa0630440 | Msa1363010 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa0630440 | Msa1364680 | 0.802447 | 5.587106e-49 | -8.615850e-47 |
| Msa0630440 | Msa1366150 | 0.803641 | 3.163422e-49 | -8.615850e-47 |
| Msa0630440 | Msa1368170 | 0.810163 | 1.321158e-50 | -8.615850e-47 |
| Msa0630440 | Msa1368750 | 0.801562 | 8.494147e-49 | -8.615850e-47 |
| Msa0630440 | Msa1368990 | 0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0630440 | Msa1371800 | 0.804882 | 1.745386e-49 | -8.615850e-47 |
| Msa0630440 | Msa1376310 | 0.806509 | 7.948505e-50 | -8.615850e-47 |
| Msa0630440 | Msa1379940 | 0.833908 | 4.069059e-56 | -8.615850e-47 |
| Msa0630440 | Msa1382830 | 0.810276 | 1.249064e-50 | -8.615850e-47 |
| Msa0630440 | Msa1385570 | 0.827145 | 1.839350e-54 | -8.615850e-47 |
| Msa0630440 | Msa1387500 | 0.816277 | 6.007746e-52 | -8.615850e-47 |
| Msa0630440 | Msa1389820 | 0.837357 | 5.451774e-57 | -8.615850e-47 |
| Msa0630440 | Msa1391500 | 0.822218 | 2.664807e-53 | -8.615850e-47 |
| Msa0630440 | Msa1393560 | 0.849845 | 2.489914e-60 | -8.615850e-47 |
| Msa0630440 | Msa1398810 | 0.803569 | 3.274863e-49 | -8.615850e-47 |
| Msa0630440 | Msa1399190 | 0.812293 | 4.559890e-51 | -8.615850e-47 |
| Msa0630440 | Msa1402010 | 0.877387 | 6.547200e-69 | -8.615850e-47 |
| Msa0630440 | Msa1405830 | 0.806315 | 8.733335e-50 | -8.615850e-47 |
| Msa0630440 | Msa1406090 | 0.864749 | 9.716039e-65 | -8.615850e-47 |
| Msa0630440 | Msa1407810 | 0.821040 | 4.987591e-53 | -8.615850e-47 |
| Msa0630440 | Msa1407840 | 0.803083 | 4.129457e-49 | -8.615850e-47 |
| Msa0630440 | Msa1413020 | 0.809915 | 1.494208e-50 | -8.615850e-47 |
| Msa0630440 | Msa1420830 | 0.812933 | 3.303943e-51 | -8.615850e-47 |
| Msa0630440 | Msa1421630 | 0.808124 | 3.612692e-50 | -8.615850e-47 |
| Msa0630440 | Msa1426320 | 0.830062 | 3.627453e-55 | -8.615850e-47 |
| Msa0630440 | Msa1428000 | 0.816462 | 5.462398e-52 | -8.615850e-47 |
| Msa0630440 | Msa1432520 | 0.803476 | 3.423554e-49 | -8.615850e-47 |
| Msa0630440 | Msa1433360 | 0.821738 | 3.441201e-53 | -8.615850e-47 |
| Msa0630440 | Msa1435100 | 0.801773 | 7.687387e-49 | -8.615850e-47 |
| Msa0630440 | Msa1435110 | 0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0630440 | Msa1436620 | 0.849660 | 2.804653e-60 | -8.615850e-47 |
| Msa0630440 | Msa1437780 | 0.820555 | 6.447455e-53 | -8.615850e-47 |
| Msa0630440 | Msa1437810 | 0.808826 | 2.559300e-50 | -8.615850e-47 |
| Msa0630440 | Msa1438510 | 0.806024 | 1.005466e-49 | -8.615850e-47 |
| Msa0630440 | Msa1439730 | 0.803048 | 4.197978e-49 | -8.615850e-47 |
| Msa0630440 | Msa1454500 | 0.802509 | 5.424631e-49 | -8.615850e-47 |
| Msa0630440 | Msa1457890 | 0.817643 | 2.964464e-52 | -8.615850e-47 |
| Msa0630440 | Msa1461770 | 0.803486 | 3.406242e-49 | -8.615850e-47 |
| Msa0630440 | Msa1462780 | 0.809312 | 2.013765e-50 | -8.615850e-47 |
| Msa0124910 | Msa0630440 | 0.817466 | 3.249567e-52 | -8.615850e-47 |
| Msa0125590 | Msa0630440 | 0.816165 | 6.365988e-52 | -8.615850e-47 |
| Msa0131810 | Msa0630440 | 0.816628 | 5.013553e-52 | -8.615850e-47 |
| Msa0139500 | Msa0630440 | 0.840279 | 9.565991e-58 | -8.615850e-47 |
| Msa0142430 | Msa0630440 | 0.820527 | 6.544022e-53 | -8.615850e-47 |
| Msa0156090 | Msa0630440 | 0.808936 | 2.423774e-50 | -8.615850e-47 |
| Msa0165640 | Msa0630440 | 0.831326 | 1.778785e-55 | -8.615850e-47 |
| Msa0168050 | Msa0630440 | 0.808680 | 2.748997e-50 | -8.615850e-47 |
| Msa0168380 | Msa0630440 | 0.843594 | 1.272596e-58 | -8.615850e-47 |
| Msa0169410 | Msa0630440 | 0.817073 | 3.983420e-52 | -8.615850e-47 |
| Msa0173250 | Msa0630440 | 0.879819 | 9.126942e-70 | -8.615850e-47 |
| Msa0183710 | Msa0630440 | 0.802694 | 4.967734e-49 | -8.615850e-47 |
| Msa0192050 | Msa0630440 | 0.850797 | 1.345788e-60 | -8.615850e-47 |
| Msa0195230 | Msa0630440 | 0.830780 | 2.421619e-55 | -8.615850e-47 |
| Msa0195260 | Msa0630440 | 0.827077 | 1.908815e-54 | -8.615850e-47 |
| Msa0197140 | Msa0630440 | 0.815925 | 7.199499e-52 | -8.615850e-47 |
| Msa0203080 | Msa0630440 | 0.859128 | 5.122177e-63 | -8.615850e-47 |
| Msa0204970 | Msa0630440 | 0.824481 | 7.887722e-54 | -8.615850e-47 |
| Msa0206370 | Msa0630440 | 0.823122 | 1.641931e-53 | -8.615850e-47 |
| Msa0368640 | Msa0630440 | 0.822418 | 2.394496e-53 | -8.615850e-47 |
| Msa0373170 | Msa0630440 | 0.813288 | 2.761187e-51 | -8.615850e-47 |
| Msa0385030 | Msa0630440 | 0.807870 | 4.091852e-50 | -8.615850e-47 |
| Msa0388250 | Msa0630440 | 0.845261 | 4.535890e-59 | -8.615850e-47 |
| Msa0388620 | Msa0630440 | 0.816492 | 5.378258e-52 | -8.615850e-47 |
| Msa0401060 | Msa0630440 | 0.877140 | 7.975762e-69 | -8.615850e-47 |
| Msa0413170 | Msa0630440 | 0.841711 | 4.026301e-58 | -8.615850e-47 |
| Msa0416210 | Msa0630440 | 0.830738 | 2.480287e-55 | -8.615850e-47 |
| Msa0421130 | Msa0630440 | 0.801522 | 8.656028e-49 | -8.615850e-47 |
| Msa0421750 | Msa0630440 | 0.809180 | 2.149100e-50 | -8.615850e-47 |
| Msa0422820 | Msa0630440 | 0.829405 | 5.243024e-55 | -8.615850e-47 |
| Msa0427420 | Msa0630440 | 0.812379 | 4.367877e-51 | -8.615850e-47 |
| Msa0427480 | Msa0630440 | 0.810977 | 8.813700e-51 | -8.615850e-47 |
| Msa0429970 | Msa0630440 | 0.808082 | 3.687792e-50 | -8.615850e-47 |
| Msa0433630 | Msa0630440 | 0.853813 | 1.864209e-61 | -8.615850e-47 |
| Msa0436100 | Msa0630440 | 0.812205 | 4.766637e-51 | -8.615850e-47 |
| Msa0436440 | Msa0630440 | 0.821853 | 3.237539e-53 | -8.615850e-47 |
| Msa0437480 | Msa0630440 | 0.848726 | 5.100113e-60 | -8.615850e-47 |
| Msa0440350 | Msa0630440 | 0.836933 | 7.000042e-57 | -8.615850e-47 |
| Msa0447870 | Msa0630440 | 0.868429 | 6.574024e-66 | -8.615850e-47 |
| Msa0458100 | Msa0630440 | 0.818876 | 1.559354e-52 | -8.615850e-47 |
| Msa0466880 | Msa0630440 | 0.809699 | 1.663279e-50 | -8.615850e-47 |
| Msa0467690 | Msa0630440 | 0.817369 | 3.417912e-52 | -8.615850e-47 |
| Msa0468390 | Msa0630440 | 0.805857 | 1.089960e-49 | -8.615850e-47 |
| Msa0468620 | Msa0630440 | 0.806585 | 7.659338e-50 | -8.615850e-47 |
| Msa0469060 | Msa0630440 | 0.819842 | 9.392503e-53 | -8.615850e-47 |
| Msa0477480 | Msa0630440 | 0.805356 | 1.388461e-49 | -8.615850e-47 |
| Msa0479480 | Msa0630440 | 0.816174 | 6.335837e-52 | -8.615850e-47 |
| Msa0480280 | Msa0630440 | 0.806061 | 9.875003e-50 | -8.615850e-47 |
| Msa0240540 | Msa0630440 | 0.823701 | 1.202002e-53 | -8.615850e-47 |
| Msa0241040 | Msa0630440 | 0.814090 | 1.838672e-51 | -8.615850e-47 |
| Msa0246210 | Msa0630440 | 0.856671 | 2.747754e-62 | -8.615850e-47 |
| Msa0249870 | Msa0630440 | 0.810474 | 1.132435e-50 | -8.615850e-47 |
| Msa0266460 | Msa0630440 | 0.802808 | 4.706340e-49 | -8.615850e-47 |
| Msa0276850 | Msa0630440 | 0.851612 | 7.923329e-61 | -8.615850e-47 |
| Msa0276860 | Msa0630440 | 0.870147 | 1.816872e-66 | -8.615850e-47 |
| Msa0279000 | Msa0630440 | 0.828782 | 7.423554e-55 | -8.615850e-47 |
| Msa0284800 | Msa0630440 | 0.807160 | 5.790421e-50 | -8.615850e-47 |
| Msa0307430 | Msa0630440 | 0.820806 | 5.646759e-53 | -8.615850e-47 |
| Msa0316000 | Msa0630440 | 0.803519 | 3.354498e-49 | -8.615850e-47 |
| Msa0320600 | Msa0630440 | 0.817816 | 2.710294e-52 | -8.615850e-47 |
| Msa0330520 | Msa0630440 | 0.808705 | 2.716239e-50 | -8.615850e-47 |
| Msa0336460 | Msa0630440 | 0.807756 | 4.326462e-50 | -8.615850e-47 |
| Msa0354840 | Msa0630440 | 0.852299 | 5.057905e-61 | -8.615850e-47 |
| Msa0356640 | Msa0630440 | 0.836475 | 9.157676e-57 | -8.615850e-47 |
| Msa0484210 | Msa0630440 | -0.818187 | 2.233827e-52 | -8.615850e-47 |
| Msa0495620 | Msa0630440 | 0.837283 | 5.693823e-57 | -8.615850e-47 |
| Msa0506750 | Msa0630440 | 0.838851 | 2.249046e-57 | -8.615850e-47 |
| Msa0513640 | Msa0630440 | 0.842476 | 2.526318e-58 | -8.615850e-47 |
| Msa0514020 | Msa0630440 | 0.826496 | 2.628344e-54 | -8.615850e-47 |
| Msa0514500 | Msa0630440 | 0.808311 | 3.297045e-50 | -8.615850e-47 |
| Msa0518410 | Msa0630440 | 0.833736 | 4.492740e-56 | -8.615850e-47 |
| Msa0521510 | Msa0630440 | 0.852033 | 6.018312e-61 | -8.615850e-47 |
| Msa0521530 | Msa0630440 | 0.843829 | 1.101726e-58 | -8.615850e-47 |
| Msa0521610 | Msa0630440 | 0.804307 | 2.300462e-49 | -8.615850e-47 |
| Msa0526150 | Msa0630440 | 0.824237 | 9.001102e-54 | -8.615850e-47 |
| Msa0527850 | Msa0630440 | 0.842482 | 2.517416e-58 | -8.615850e-47 |
| Msa0533990 | Msa0630440 | 0.853399 | 2.451628e-61 | -8.615850e-47 |
| Msa0544430 | Msa0630440 | 0.803482 | 3.414338e-49 | -8.615850e-47 |
| Msa0549870 | Msa0630440 | 0.803348 | 3.638067e-49 | -8.615850e-47 |
| Msa0553750 | Msa0630440 | 0.837466 | 5.112764e-57 | -8.615850e-47 |
| Msa0567330 | Msa0630440 | 0.827675 | 1.372544e-54 | -8.615850e-47 |
| Msa0567570 | Msa0630440 | 0.815205 | 1.041611e-51 | -8.615850e-47 |
| Msa0567610 | Msa0630440 | 0.850059 | 2.168346e-60 | -8.615850e-47 |
| Msa0568290 | Msa0630440 | -0.819199 | 1.316777e-52 | -8.615850e-47 |
| Msa0572360 | Msa0630440 | 0.830431 | 2.948113e-55 | -8.615850e-47 |
| Msa0572830 | Msa0630440 | 0.845992 | 2.872941e-59 | -8.615850e-47 |
| Msa0574900 | Msa0630440 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0576320 | Msa0630440 | 0.827692 | 1.359223e-54 | -8.615850e-47 |
| Msa0579080 | Msa0630440 | 0.833325 | 5.691310e-56 | -8.615850e-47 |
| Msa0579160 | Msa0630440 | 0.812725 | 3.668969e-51 | -8.615850e-47 |
| Msa0579220 | Msa0630440 | 0.819452 | 1.153007e-52 | -8.615850e-47 |
| Msa0582460 | Msa0630440 | 0.844260 | 8.442445e-59 | -8.615850e-47 |
| Msa0586200 | Msa0630440 | 0.833299 | 5.775539e-56 | -8.615850e-47 |
| Msa0590000 | Msa0630440 | 0.871260 | 7.828200e-67 | -8.615850e-47 |
| Msa0601380 | Msa0630440 | 0.827195 | 1.788972e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630440 | MtrunA17_Chr4g0007371 | 99.113 | 451 | 2 | 1 | 1 | 449 | 1 | 451 | 0.0 | 936 |
| Msa0630440 | MtrunA17_Chr4g0008401 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| Msa0630440 | MtrunA17_Chr4g0008361 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0630440 | MtrunA17_Chr1g0203181 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0630440 | MtrunA17_Chr4g0051631 | 95.116 | 430 | 21 | 0 | 1 | 430 | 1 | 430 | 0.0 | 842 |
| Msa0630440 | MtrunA17_Chr2g0292921 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 841 |
| Msa0630440 | MtrunA17_Chr7g0255791 | 94.419 | 430 | 24 | 0 | 1 | 430 | 1 | 430 | 0.0 | 837 |
| Msa0630440 | MtrunA17_Chr3g0142731 | 93.056 | 432 | 28 | 1 | 1 | 430 | 1 | 432 | 0.0 | 825 |
| Msa0630440 | MtrunA17_Chr8g0386781 | 90.698 | 430 | 40 | 0 | 1 | 430 | 1 | 430 | 0.0 | 816 |
| Msa0630440 | MtrunA17_Chr8g0393021 | 90.271 | 442 | 40 | 2 | 1 | 439 | 1 | 442 | 0.0 | 814 |
| Msa0630440 | MtrunA17_Chr8g0378821 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 8.66e-126 | 372 |
| Msa0630440 | MtrunA17_Chr3g0140821 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.35e-124 | 369 |
| Msa0630440 | MtrunA17_Chr1g0206881 | 41.203 | 449 | 251 | 3 | 1 | 439 | 1 | 446 | 3.70e-124 | 368 |
| Msa0630440 | MtrunA17_Chr7g0253411 | 40.783 | 434 | 247 | 2 | 1 | 424 | 1 | 434 | 7.16e-124 | 367 |
| Msa0630440 | MtrunA17_Chr4g0054511 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 1.49e-122 | 364 |
| Msa0630440 | MtrunA17_Chr6g0461281 | 40.393 | 458 | 252 | 3 | 1 | 447 | 1 | 448 | 1.94e-122 | 363 |
| Msa0630440 | MtrunA17_Chr2g0300671 | 37.727 | 440 | 261 | 4 | 1 | 431 | 1 | 436 | 2.59e-101 | 309 |
| Msa0630440 | MtrunA17_Chr2g0300491 | 36.889 | 450 | 273 | 3 | 1 | 442 | 1 | 447 | 1.53e-99 | 306 |
| Msa0630440 | MtrunA17_Chr7g0275431 | 36.073 | 438 | 263 | 7 | 2 | 423 | 3 | 439 | 4.53e-99 | 305 |
| Msa0630440 | MtrunA17_Chr3g0109241 | 32.593 | 135 | 83 | 1 | 269 | 395 | 4 | 138 | 1.01e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630440 | AT5G62690.1 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| Msa0630440 | AT5G62700.1 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| Msa0630440 | AT5G23860.2 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0630440 | AT5G23860.1 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0630440 | AT2G29550.1 | 95.360 | 431 | 20 | 0 | 1 | 431 | 1 | 431 | 0.0 | 843 |
| Msa0630440 | AT1G75780.1 | 94.432 | 431 | 23 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| Msa0630440 | AT5G12250.1 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 836 |
| Msa0630440 | AT4G20890.1 | 94.186 | 430 | 25 | 0 | 1 | 430 | 1 | 430 | 0.0 | 834 |
| Msa0630440 | AT5G44340.1 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 831 |
| Msa0630440 | AT1G20010.1 | 93.271 | 431 | 28 | 1 | 1 | 430 | 1 | 431 | 0.0 | 828 |
| Msa0630440 | AT1G64740.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 5.53e-126 | 373 |
| Msa0630440 | AT5G19780.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 2.01e-125 | 372 |
| Msa0630440 | AT5G19770.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 2.01e-125 | 372 |
| Msa0630440 | AT4G14960.2 | 41.781 | 438 | 242 | 3 | 1 | 428 | 1 | 435 | 2.22e-122 | 364 |
| Msa0630440 | AT1G50010.1 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 1.45e-121 | 362 |
| Msa0630440 | AT1G04820.1 | 41.553 | 438 | 243 | 3 | 1 | 428 | 1 | 435 | 1.45e-121 | 362 |
| Msa0630440 | AT4G14960.1 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 4.29e-104 | 316 |
| Msa0630440 | AT3G61650.1 | 35.011 | 457 | 278 | 8 | 2 | 442 | 3 | 456 | 5.63e-98 | 302 |
| Msa0630440 | AT5G05620.1 | 35.616 | 438 | 265 | 7 | 2 | 423 | 3 | 439 | 9.04e-98 | 301 |
Find 142 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGCTGTAAAATTGATTT+TGG | 0.164016 | 4_3:+12344676 | Msa0630440:three_prime_UTR |
| AAGAAGGTTGAAATGAAATT+TGG | 0.190671 | 4_3:-12342008 | None:intergenic |
| ACCAAATCGGAGCAAAATTC+TGG | 0.222809 | 4_3:+12342121 | Msa0630440:CDS |
| CACTCACTTGGTGGAGGAAC+TGG | 0.264774 | 4_3:+12343545 | Msa0630440:CDS |
| CACATTTGTTGAGTGAGTTC+AGG | 0.280737 | 4_3:-12344114 | None:intergenic |
| TGGAATCCATTCCACAAAAT+AGG | 0.297243 | 4_3:-12344271 | None:intergenic |
| ACAGTAGACTTGACATTGTT+TGG | 0.300254 | 4_3:-12344291 | None:intergenic |
| TGTTCCGAGAGCGGTTCTTA+TGG | 0.304100 | 4_3:+12342257 | Msa0630440:CDS |
| AGAGTGGTGCTGGGAATAAC+TGG | 0.308905 | 4_3:+12342361 | Msa0630440:CDS |
| ACTGCTTCAGCCATGTTTAG+AGG | 0.311640 | 4_3:+12344189 | Msa0630440:CDS |
| AAAATGGCTTCAACATTCAT+TGG | 0.324788 | 4_3:+12344339 | Msa0630440:CDS |
| AGAAGGTTGAAATGAAATTT+GGG | 0.333106 | 4_3:-12342007 | None:intergenic |
| GGATCTTGAACCGGGTACTA+TGG | 0.338256 | 4_3:+12342278 | Msa0630440:CDS |
| TGGAAACTCCACATCCATTC+AGG | 0.349700 | 4_3:+12344359 | Msa0630440:CDS |
| GTGTTTGGTCAGAGTGGTGC+TGG | 0.360890 | 4_3:+12342351 | Msa0630440:CDS |
| TGAGAATTGTGATTGCTTGC+AGG | 0.369709 | 4_3:+12342452 | Msa0630440:CDS |
| CACTGCTATGTTCAGGAGAA+AGG | 0.380989 | 4_3:+12344410 | Msa0630440:CDS |
| TGATTTGAATCATCTGATAT+CGG | 0.392321 | 4_3:+12343924 | Msa0630440:CDS |
| GTCAGCTTAACTCTGATCTT+AGG | 0.393922 | 4_3:+12343986 | Msa0630440:CDS |
| AATAGGAGGAGTTCTTGTTC+TGG | 0.394999 | 4_3:-12344254 | None:intergenic |
| CACTTAGAGTCCTGTACTGC+TGG | 0.395756 | 4_3:-12344089 | None:intergenic |
| CTTGGTGGAGGAACTGGGTC+TGG | 0.396498 | 4_3:+12343551 | Msa0630440:CDS |
| TGTGAGTGTGAGAGAGGGTT+TGG | 0.397717 | 4_3:-12341963 | None:intergenic |
| CTCCGATTTGGTTACCGCAT+TGG | 0.398686 | 4_3:-12342110 | None:intergenic |
| CTGATATCGGCAACCATGTC+TGG | 0.400655 | 4_3:+12343937 | Msa0630440:CDS |
| AGCAGCACACATCATGTTCT+TGG | 0.404220 | 4_3:-12344142 | None:intergenic |
| ACCTGTTGTTTGAGGTTCCC+TGG | 0.407604 | 4_3:+12343964 | Msa0630440:CDS |
| GGTTCTTATGGATCTTGAAC+CGG | 0.408619 | 4_3:+12342269 | Msa0630440:CDS |
| GGATGAGTATGGAGAGGAAG+AGG | 0.417641 | 4_3:+12344551 | Msa0630440:CDS |
| AAAGTAAGCATCATCCTGTC+TGG | 0.418443 | 4_3:-12343614 | None:intergenic |
| GAAATGAAAATTTGTGAAGA+AGG | 0.419340 | 4_3:-12342024 | None:intergenic |
| GGTTGGATCGATTCCATGTT+CGG | 0.419355 | 4_3:-12342157 | None:intergenic |
| CATTTGTTCATCAACCTCCT+TGG | 0.421209 | 4_3:-12344223 | None:intergenic |
| AACAATTCACTGCTATGTTC+AGG | 0.434258 | 4_3:+12344403 | Msa0630440:CDS |
| CCTCATCAGCGGTGGCATCT+TGG | 0.436615 | 4_3:-12344530 | None:intergenic |
| ACCGCTGATGAGGATGAGTA+TGG | 0.442177 | 4_3:+12344540 | Msa0630440:CDS |
| AACAGAGAGGGTAGCATTGT+AGG | 0.442752 | 4_3:-12343681 | None:intergenic |
| ACATTTGTTGAGTGAGTTCA+GGG | 0.452523 | 4_3:-12344113 | None:intergenic |
| GGAGGAACTGGGTCTGGAAT+GGG | 0.456477 | 4_3:+12343557 | Msa0630440:CDS |
| CTGGTGTCACCTGTTGTTTG+AGG | 0.465900 | 4_3:+12343956 | Msa0630440:CDS |
| TCCTGTACTGCTGGGAGCCA+CGG | 0.467863 | 4_3:-12344080 | None:intergenic |
| CTGGGAATAACTGGGCTAAA+GGG | 0.468422 | 4_3:+12342370 | Msa0630440:CDS |
| TGGAGAGGAAGAGGGTGAAG+AGG | 0.473975 | 4_3:+12344560 | Msa0630440:CDS |
| GGCCAATGCGGTAACCAAAT+CGG | 0.477508 | 4_3:+12342108 | Msa0630440:CDS |
| GGAGAAAGGCTTTCTTGCAT+TGG | 0.478824 | 4_3:+12344424 | Msa0630440:CDS |
| TGAATCACCGGTGTAGCGTC+CGG | 0.479982 | 4_3:-12342178 | None:intergenic |
| ACCAGGGAACCTCAAACAAC+AGG | 0.480075 | 4_3:-12343965 | None:intergenic |
| GCTGGGAATAACTGGGCTAA+AGG | 0.483743 | 4_3:+12342369 | Msa0630440:CDS |
| GTGAGGTATCGCCCATGCCT+AGG | 0.488888 | 4_3:-12344168 | None:intergenic |
| CCCGTGGCTCCCAGCAGTAC+AGG | 0.489965 | 4_3:+12344079 | Msa0630440:CDS |
| TTGATGTGACCTGTTGGTAG+TGG | 0.497914 | 4_3:+12344709 | Msa0630440:three_prime_UTR |
| GATGAGTATGGAGAGGAAGA+GGG | 0.503164 | 4_3:+12344552 | Msa0630440:CDS |
| AGCTAGCTAACGTACAGCTT+GGG | 0.504932 | 4_3:-12343793 | None:intergenic |
| ACTCACTTGGTGGAGGAACT+GGG | 0.505509 | 4_3:+12343546 | Msa0630440:CDS |
| CCAAATCGGAGCAAAATTCT+GGG | 0.506377 | 4_3:+12342122 | Msa0630440:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.506815 | 4_3:+12344432 | Msa0630440:CDS |
| CCTGTACTGCTGGGAGCCAC+GGG | 0.507415 | 4_3:-12344079 | None:intergenic |
| CAGAAGAACATGTCACAAGA+TGG | 0.507580 | 4_3:-12344872 | None:intergenic |
| TGGAGGAACTGGGTCTGGAA+TGG | 0.508835 | 4_3:+12343556 | Msa0630440:CDS |
| TGTGCTGCTGACCCTAGGCA+TGG | 0.509772 | 4_3:+12344156 | Msa0630440:CDS |
| TGTCTTTCTCCACTACCAAC+AGG | 0.510299 | 4_3:-12344718 | None:intergenic |
| TGACCAAACACAAAATTATC+CGG | 0.511815 | 4_3:-12342339 | None:intergenic |
| CAAGTATGCCACTCACTTGG+TGG | 0.517337 | 4_3:+12343536 | Msa0630440:CDS |
| TGAGAGTGTGAGTGTGAGAG+AGG | 0.522101 | 4_3:-12341969 | None:intergenic |
| AGATCAGAGTTAAGCTGACC+AGG | 0.523471 | 4_3:-12343982 | None:intergenic |
| CCTACGGAACATTTCCTGAA+TGG | 0.523804 | 4_3:-12344373 | None:intergenic |
| TTGCATTGGTACACTGGTGA+AGG | 0.524227 | 4_3:+12344438 | Msa0630440:CDS |
| TTTCAAGTATGCCACTCACT+TGG | 0.530375 | 4_3:+12343533 | Msa0630440:CDS |
| CGGGTACTATGGATAGTATC+CGG | 0.537467 | 4_3:+12342289 | Msa0630440:CDS |
| ACTATGGATAGTATCCGGTC+TGG | 0.540371 | 4_3:+12342294 | Msa0630440:CDS |
| GCTCATCTTGCCTCTAAACA+TGG | 0.543181 | 4_3:-12344199 | None:intergenic |
| GAACATTTCCTGAATGGATG+TGG | 0.547117 | 4_3:-12344367 | None:intergenic |
| ACAGAGAGGGTAGCATTGTA+GGG | 0.548602 | 4_3:-12343680 | None:intergenic |
| CTGAACTCACTCAACAAATG+TGG | 0.548817 | 4_3:+12344115 | Msa0630440:CDS |
| ATCGTAGAATTTATTAACTG+TGG | 0.549899 | 4_3:+12344803 | Msa0630440:three_prime_UTR |
| TCCTAAGGTTTCTGACACTG+TGG | 0.549921 | 4_3:+12343652 | Msa0630440:CDS |
| CCAAGATGCCACCGCTGATG+AGG | 0.550130 | 4_3:+12344530 | Msa0630440:CDS |
| ATTCAGATCTTCAACTTGAA+CGG | 0.550491 | 4_3:+12342196 | Msa0630440:CDS |
| GTGTCAGAAACCTTAGGAGA+AGG | 0.550838 | 4_3:-12343647 | None:intergenic |
| AGTATCCGGTCTGGACCGTA+TGG | 0.551849 | 4_3:+12342303 | Msa0630440:CDS |
| TGAGAGCAACATGAATGATC+TGG | 0.551963 | 4_3:+12344488 | Msa0630440:CDS |
| GAACATGGAATCGATCCAAC+CGG | 0.551983 | 4_3:+12342159 | Msa0630440:CDS |
| GAGAGTGTGAGTGTGAGAGA+GGG | 0.556844 | 4_3:-12341968 | None:intergenic |
| GTTCTTATGGATCTTGAACC+GGG | 0.556874 | 4_3:+12342270 | Msa0630440:CDS |
| GGTTACCGCATTGGCCACCT+TGG | 0.557526 | 4_3:-12342101 | None:intergenic |
| TGAGGTATCGCCCATGCCTA+GGG | 0.558978 | 4_3:-12344167 | None:intergenic |
| TGGTGAAGGCATGGACGAGA+TGG | 0.560351 | 4_3:+12344452 | Msa0630440:CDS |
| TGATGTGTGCTGCTGACCCT+AGG | 0.561458 | 4_3:+12344151 | Msa0630440:CDS |
| GAGAATTGTGATTGCTTGCA+GGG | 0.561746 | 4_3:+12342453 | Msa0630440:CDS |
| CCATTCAGGAAATGTTCCGT+AGG | 0.563699 | 4_3:+12344373 | Msa0630440:CDS |
| TGTTTGGTCAGAGTGGTGCT+GGG | 0.566395 | 4_3:+12342352 | Msa0630440:CDS |
| TGAAAACGCAGACGAGGTCA+TGG | 0.568870 | 4_3:+12343715 | Msa0630440:CDS |
| TGGGAGCCACGGGAAGTCAA+AGG | 0.569752 | 4_3:-12344069 | None:intergenic |
| TCAGGGAAGAATACCCAGAC+AGG | 0.570015 | 4_3:+12343600 | Msa0630440:CDS |
| TCACCGGTGTAGCGTCCGGT+TGG | 0.574212 | 4_3:-12342174 | None:intergenic |
| GCGGAAGCAAATGTCATACA+AGG | 0.580969 | 4_3:-12343753 | None:intergenic |
| TGAACTCACTCAACAAATGT+GGG | 0.582230 | 4_3:+12344116 | Msa0630440:CDS |
| AGATCCATAAGAACCGCTCT+CGG | 0.582689 | 4_3:-12342261 | None:intergenic |
| GAAGTCGTTTGCGCCGAACA+TGG | 0.583535 | 4_3:+12342144 | Msa0630440:CDS |
| CGTCAAATTCTTCACATCCA+AGG | 0.585397 | 4_3:+12342084 | Msa0630440:CDS |
| ACAATGAAGCAAGTGGTGGA+AGG | 0.586059 | 4_3:+12342232 | Msa0630440:CDS |
| AAGTAAGCATCATCCTGTCT+GGG | 0.586190 | 4_3:-12343613 | None:intergenic |
| ACCACAGTGTCAGAAACCTT+AGG | 0.586612 | 4_3:-12343653 | None:intergenic |
| TGGAAGGTTTGTTCCGAGAG+CGG | 0.586683 | 4_3:+12342248 | Msa0630440:CDS |
| TTTGCTCCTTTGACTTCCCG+TGG | 0.590682 | 4_3:+12344063 | Msa0630440:CDS |
| AGAAGAACATGTCACAAGAT+GGG | 0.594643 | 4_3:-12344871 | None:intergenic |
| TGTCAGAAACCTTAGGAGAA+GGG | 0.599265 | 4_3:-12343646 | None:intergenic |
| AAGTTGAAGATCTGAATCAC+CGG | 0.607154 | 4_3:-12342190 | None:intergenic |
| TGAATTGTTCACTCACCCTA+CGG | 0.607184 | 4_3:-12344389 | None:intergenic |
| GGTTGCTGAGCTTCAAAATG+CGG | 0.608746 | 4_3:-12343772 | None:intergenic |
| TTGGTACACTGGTGAAGGCA+TGG | 0.610557 | 4_3:+12344443 | Msa0630440:CDS |
| AATCCATTCCACAAAATAGG+AGG | 0.611691 | 4_3:-12344268 | None:intergenic |
| TCTGACCATACGGTCCAGAC+CGG | 0.612759 | 4_3:-12342308 | None:intergenic |
| CATTCAGGAAATGTTCCGTA+GGG | 0.612874 | 4_3:+12344374 | Msa0630440:CDS |
| ACTTAGAGTCCTGTACTGCT+GGG | 0.613311 | 4_3:-12344088 | None:intergenic |
| GATCCAACCGGACGCTACAC+CGG | 0.618066 | 4_3:+12342171 | Msa0630440:CDS |
| GTATGGTCAGATCTTTAGAC+CGG | 0.619894 | 4_3:+12342320 | Msa0630440:CDS |
| GGTCTAAAGATCTGACCATA+CGG | 0.621130 | 4_3:-12342318 | None:intergenic |
| GAGTGGTGCTGGGAATAACT+GGG | 0.622575 | 4_3:+12342362 | Msa0630440:CDS |
| CACATCCAAGGTGGCCAATG+CGG | 0.624440 | 4_3:+12342096 | Msa0630440:CDS |
| GTGCTGCTGACCCTAGGCAT+GGG | 0.624521 | 4_3:+12344157 | Msa0630440:CDS |
| CAGTTCCTCCACCAAGTGAG+TGG | 0.625629 | 4_3:-12343544 | None:intergenic |
| GCTAAAGGGCATTATACTGA+AGG | 0.627222 | 4_3:+12342384 | Msa0630440:CDS |
| CGGATACTATCCATAGTACC+CGG | 0.627540 | 4_3:-12342288 | None:intergenic |
| GTATGCCACTCACTTGGTGG+AGG | 0.629569 | 4_3:+12343539 | Msa0630440:CDS |
| AACAAGCTGATGAACAGAGA+GGG | 0.636232 | 4_3:-12343693 | None:intergenic |
| TCCATACTCATCCTCATCAG+CGG | 0.637103 | 4_3:-12344541 | None:intergenic |
| TGACATGTGATCTTGAATGA+AGG | 0.644561 | 4_3:+12344596 | Msa0630440:exon |
| ACAACAGGTGACACCAGACA+TGG | 0.645746 | 4_3:-12343950 | None:intergenic |
| ATACTCATCCTCATCAGCGG+TGG | 0.651736 | 4_3:-12344538 | None:intergenic |
| GCTTGTTGAAAACGCAGACG+AGG | 0.652206 | 4_3:+12343709 | Msa0630440:CDS |
| ACAGTTAATAAATTCTACGA+TGG | 0.654518 | 4_3:-12344801 | None:intergenic |
| TATTACAATGAAGCAAGTGG+TGG | 0.660724 | 4_3:+12342228 | Msa0630440:CDS |
| GATCAGAGTTAAGCTGACCA+GGG | 0.663223 | 4_3:-12343981 | None:intergenic |
| TGATGAGGATGAGTATGGAG+AGG | 0.668397 | 4_3:+12344545 | Msa0630440:CDS |
| CAACAAGCTGATGAACAGAG+AGG | 0.676645 | 4_3:-12343694 | None:intergenic |
| TAGAGGCAAGATGAGCACCA+AGG | 0.693808 | 4_3:+12344206 | Msa0630440:CDS |
| CAAATTCTTCACATCCAAGG+TGG | 0.706919 | 4_3:+12342087 | Msa0630440:CDS |
| TAAACATGGCTGAAGCAGTG+AGG | 0.710604 | 4_3:-12344185 | None:intergenic |
| AGGCAAGATGAGCACCAAGG+AGG | 0.712769 | 4_3:+12344209 | Msa0630440:CDS |
| GTGTATTACAATGAAGCAAG+TGG | 0.718256 | 4_3:+12342225 | Msa0630440:CDS |
| GGACGAGATGGAATTCACTG+AGG | 0.754042 | 4_3:+12344464 | Msa0630440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGAATTTTTGTGATTTT+AGG | + | chr4_3:12342490-12342509 | Msa0630440:intron | 15.0% |
| !!! | TTTGAATTTTTGTGATTTTA+GGG | + | chr4_3:12342491-12342510 | Msa0630440:intron | 15.0% |
| !!! | TTTAACTTGTTTTGAAATTT+AGG | + | chr4_3:12342590-12342609 | Msa0630440:intron | 15.0% |
| !!! | TTAACTTGTTTTGAAATTTA+GGG | + | chr4_3:12342591-12342610 | Msa0630440:intron | 15.0% |
| !! | ATTTGTTTGTGATTTATTTA+TGG | + | chr4_3:12342823-12342842 | Msa0630440:intron | 15.0% |
| !! | TTTGTTTGTGATTTATTTAT+GGG | + | chr4_3:12342824-12342843 | Msa0630440:intron | 15.0% |
| !!! | TGGGGTTTTTTTTTTTTTTT+TGG | - | chr4_3:12341928-12341947 | None:intergenic | 20.0% |
| !!! | TCTAACTTGTTTTGAAATTT+AGG | + | chr4_3:12342862-12342881 | Msa0630440:intron | 20.0% |
| !!! | GTAATGTGTTTGATTTTATT+TGG | + | chr4_3:12343889-12343908 | Msa0630440:intron | 20.0% |
| !!! | TTGGTTTTTATAGAGGAAAT+GGG | - | chr4_3:12341947-12341966 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTATAGAGGAAA+TGG | - | chr4_3:12341948-12341967 | None:intergenic | 25.0% |
| ! | AGAAGGTTGAAATGAAATTT+GGG | - | chr4_3:12342010-12342029 | None:intergenic | 25.0% |
| ! | AAGAAGGTTGAAATGAAATT+TGG | - | chr4_3:12342011-12342030 | None:intergenic | 25.0% |
| ! | GAAATGAAAATTTGTGAAGA+AGG | - | chr4_3:12342027-12342046 | None:intergenic | 25.0% |
| !! | CTTCACAAATTTTCATTTCT+AGG | + | chr4_3:12342028-12342047 | Msa0630440:five_prime_UTR | 25.0% |
| !!! | ATTTGACGCATTTTGAAAAA+GGG | - | chr4_3:12342072-12342091 | None:intergenic | 25.0% |
| !!! | AATTTGACGCATTTTGAAAA+AGG | - | chr4_3:12342073-12342092 | None:intergenic | 25.0% |
| !!! | TTAGGGTTTTGTTGATTTTT+TGG | + | chr4_3:12342725-12342744 | Msa0630440:intron | 25.0% |
| !!! | TAGGGTTTTGTTGATTTTTT+GGG | + | chr4_3:12342726-12342745 | Msa0630440:intron | 25.0% |
| !! | TTGTTTTCAATAGAGTTTTG+TGG | + | chr4_3:12342962-12342981 | Msa0630440:intron | 25.0% |
| !!! | TTCTGACTTGTTTTGAAATT+TGG | + | chr4_3:12343017-12343036 | Msa0630440:intron | 25.0% |
| !!! | TCTGACTTGTTTTGAAATTT+GGG | + | chr4_3:12343018-12343037 | Msa0630440:intron | 25.0% |
| !! | ATTGAAGTTGTTTGAAATTC+AGG | + | chr4_3:12343201-12343220 | Msa0630440:intron | 25.0% |
| !! | TTGAAGTTGTTTGAAATTCA+GGG | + | chr4_3:12343202-12343221 | Msa0630440:intron | 25.0% |
| !!! | TTTGTTTGCTTTTTTATGCA+AGG | + | chr4_3:12343440-12343459 | Msa0630440:intron | 25.0% |
| !!! | TTGTTTGCTTTTTTATGCAA+GGG | + | chr4_3:12343441-12343460 | Msa0630440:intron | 25.0% |
| !!! | TCTTTTGATTTCAAAGATCA+GGG | + | chr4_3:12343583-12343602 | Msa0630440:CDS | 25.0% |
| !!! | ATGTGTTTGATTTTATTTGG+CGG | + | chr4_3:12343892-12343911 | Msa0630440:intron | 25.0% |
| ! | TGATTTGAATCATCTGATAT+CGG | + | chr4_3:12343924-12343943 | Msa0630440:CDS | 25.0% |
| !!! | CTATGCTGTAAAATTGATTT+TGG | + | chr4_3:12344676-12344695 | Msa0630440:three_prime_UTR | 25.0% |
| ! | ACAGTTAATAAATTCTACGA+TGG | - | chr4_3:12344804-12344823 | None:intergenic | 25.0% |
| ! | ATCGTAGAATTTATTAACTG+TGG | + | chr4_3:12344803-12344822 | Msa0630440:three_prime_UTR | 25.0% |
| ! | TGGTTTTTATAGAGGAAATG+GGG | - | chr4_3:12341946-12341965 | None:intergenic | 30.0% |
| !! | AATTTGGGTTTTCGTTTCTA+GGG | - | chr4_3:12341995-12342014 | None:intergenic | 30.0% |
| !! | AAATTTGGGTTTTCGTTTCT+AGG | - | chr4_3:12341996-12342015 | None:intergenic | 30.0% |
| ATTCAGATCTTCAACTTGAA+CGG | + | chr4_3:12342196-12342215 | Msa0630440:CDS | 30.0% | |
| TGACCAAACACAAAATTATC+CGG | - | chr4_3:12342342-12342361 | None:intergenic | 30.0% | |
| !! | GTGTTTTTGTAGTGTTTTGT+CGG | + | chr4_3:12342532-12342551 | Msa0630440:intron | 30.0% |
| ! | TTTGTGGGTGATTTTTGTAA+TGG | + | chr4_3:12342690-12342709 | Msa0630440:intron | 30.0% |
| ! | TTGTGGGTGATTTTTGTAAT+GGG | + | chr4_3:12342691-12342710 | Msa0630440:intron | 30.0% |
| !!! | TGATTTTTGTAATGGGTATG+TGG | + | chr4_3:12342698-12342717 | Msa0630440:intron | 30.0% |
| !!! | AGGGTTTTGTTGATTTTTTG+GGG | + | chr4_3:12342727-12342746 | Msa0630440:intron | 30.0% |
| !!! | TGTTGATTTTTTGGGGTTTA+TGG | + | chr4_3:12342734-12342753 | Msa0630440:intron | 30.0% |
| ! | TTATTTATGGGTTGTGTTGA+TGG | + | chr4_3:12342836-12342855 | Msa0630440:intron | 30.0% |
| !!! | GTTTGTTTTGAAGTGTTGAT+TGG | + | chr4_3:12342890-12342909 | Msa0630440:intron | 30.0% |
| !! | TGATTGGTTTGTTAAGTGTT+TGG | + | chr4_3:12342906-12342925 | Msa0630440:intron | 30.0% |
| !!! | CTGACTTGTTTTGAAATTTG+GGG | + | chr4_3:12343019-12343038 | Msa0630440:intron | 30.0% |
| !! | TGTTGATTTAGATGTGTTGA+TGG | + | chr4_3:12343045-12343064 | Msa0630440:intron | 30.0% |
| !! | ATGTGTTTTTATACAGTCGT+GGG | + | chr4_3:12343116-12343135 | Msa0630440:intron | 30.0% |
| ! | TTTGAAGTGCTAGATTTGTT+AGG | + | chr4_3:12343235-12343254 | Msa0630440:intron | 30.0% |
| !! | TTGAAGTGCTAGATTTGTTA+GGG | + | chr4_3:12343236-12343255 | Msa0630440:intron | 30.0% |
| ! | TTATGTCTTGTTGCTGTTAA+TGG | + | chr4_3:12343337-12343356 | Msa0630440:intron | 30.0% |
| ! | TATGTCTTGTTGCTGTTAAT+GGG | + | chr4_3:12343338-12343357 | Msa0630440:intron | 30.0% |
| AAAACCTAATTTCGAAGACA+AGG | - | chr4_3:12343407-12343426 | None:intergenic | 30.0% | |
| ! | TGTCTTCGAAATTAGGTTTT+AGG | + | chr4_3:12343407-12343426 | Msa0630440:intron | 30.0% |
| ! | GTCTTCGAAATTAGGTTTTA+GGG | + | chr4_3:12343408-12343427 | Msa0630440:intron | 30.0% |
| !! | GATTAACTTTGATAGTGTTG+TGG | + | chr4_3:12343463-12343482 | Msa0630440:intron | 30.0% |
| !!! | CTCTTTTGATTTCAAAGATC+AGG | + | chr4_3:12343582-12343601 | Msa0630440:CDS | 30.0% |
| AAAATGGCTTCAACATTCAT+TGG | + | chr4_3:12344339-12344358 | Msa0630440:CDS | 30.0% | |
| !!! | TAAGCATCACTTTTTGTTGT+TGG | + | chr4_3:12344757-12344776 | Msa0630440:three_prime_UTR | 30.0% |
| !!! | AGAGGGTTTGGTTTTTATAG+AGG | - | chr4_3:12341954-12341973 | None:intergenic | 35.0% |
| AAGTTGAAGATCTGAATCAC+CGG | - | chr4_3:12342193-12342212 | None:intergenic | 35.0% | |
| GTGTATTACAATGAAGCAAG+TGG | + | chr4_3:12342225-12342244 | Msa0630440:CDS | 35.0% | |
| TATTACAATGAAGCAAGTGG+TGG | + | chr4_3:12342228-12342247 | Msa0630440:CDS | 35.0% | |
| ! | AGACCGGATAATTTTGTGTT+TGG | + | chr4_3:12342336-12342355 | Msa0630440:CDS | 35.0% |
| ! | AATTTTGTGTTTGGTCAGAG+TGG | + | chr4_3:12342345-12342364 | Msa0630440:CDS | 35.0% |
| ! | TTTTTGTAGTGTTTTGTCGG+TGG | + | chr4_3:12342535-12342554 | Msa0630440:intron | 35.0% |
| ! | TTTGTCGGTGGTTTTTGTAA+TGG | + | chr4_3:12342547-12342566 | Msa0630440:intron | 35.0% |
| ! | TTGTCGGTGGTTTTTGTAAT+GGG | + | chr4_3:12342548-12342567 | Msa0630440:intron | 35.0% |
| !! | CATTGATTGAGAAGTGTTGA+TGG | + | chr4_3:12342617-12342636 | Msa0630440:intron | 35.0% |
| !!! | GAAGTGTTGAAGTGTTTTTG+TGG | + | chr4_3:12342664-12342683 | Msa0630440:intron | 35.0% |
| !! | AGTGTTTTTGTGGAGTTTTG+TGG | + | chr4_3:12342674-12342693 | Msa0630440:intron | 35.0% |
| !! | GTGTTTTTGTGGAGTTTTGT+GGG | + | chr4_3:12342675-12342694 | Msa0630440:intron | 35.0% |
| ! | TAATGGGTATGTGGTCATTT+AGG | + | chr4_3:12342707-12342726 | Msa0630440:intron | 35.0% |
| AATGGGTATGTGGTCATTTA+GGG | + | chr4_3:12342708-12342727 | Msa0630440:intron | 35.0% | |
| !! | TTTGAAGTGATGAAGTGTTG+TGG | + | chr4_3:12342772-12342791 | Msa0630440:intron | 35.0% |
| !! | TTTCAATAGAGTTTTGTGGC+TGG | + | chr4_3:12342966-12342985 | Msa0630440:intron | 35.0% |
| !! | GATGTGTTTTTATACAGTCG+TGG | + | chr4_3:12343115-12343134 | Msa0630440:intron | 35.0% |
| !! | GTGATTCTTGTAATGGGTAT+GGG | + | chr4_3:12343138-12343157 | Msa0630440:intron | 35.0% |
| ACCCTGCAAACAATAACAAA+GGG | - | chr4_3:12343173-12343192 | None:intergenic | 35.0% | |
| TACCCTGCAAACAATAACAA+AGG | - | chr4_3:12343174-12343193 | None:intergenic | 35.0% | |
| ! | TTGTTATTGTTTGCAGGGTA+TGG | + | chr4_3:12343174-12343193 | Msa0630440:intron | 35.0% |
| !! | TAGATTTGTTAGGGTTTGTC+TGG | + | chr4_3:12343245-12343264 | Msa0630440:intron | 35.0% |
| TGTAGTTGTAAGTTTCTGTG+TGG | + | chr4_3:12343290-12343309 | Msa0630440:intron | 35.0% | |
| ! | AAGTTTCTGTGTGGTTTTCT+AGG | + | chr4_3:12343299-12343318 | Msa0630440:intron | 35.0% |
| ! | AGTTTCTGTGTGGTTTTCTA+GGG | + | chr4_3:12343300-12343319 | Msa0630440:intron | 35.0% |
| ACTTCCTTGTCTTCGAAATT+AGG | + | chr4_3:12343400-12343419 | Msa0630440:intron | 35.0% | |
| GTTGTGGCTGATTATGAAAT+TGG | + | chr4_3:12343479-12343498 | Msa0630440:intron | 35.0% | |
| GGCTGATTATGAAATTGGTT+TGG | + | chr4_3:12343484-12343503 | Msa0630440:intron | 35.0% | |
| !! | TGTTTTATTGTTGTGTGTGC+AGG | + | chr4_3:12343509-12343528 | Msa0630440:intron | 35.0% |
| ! | ACATTTGTTGAGTGAGTTCA+GGG | - | chr4_3:12344116-12344135 | None:intergenic | 35.0% |
| TGAACTCACTCAACAAATGT+GGG | + | chr4_3:12344116-12344135 | Msa0630440:CDS | 35.0% | |
| AATCCATTCCACAAAATAGG+AGG | - | chr4_3:12344271-12344290 | None:intergenic | 35.0% | |
| TGGAATCCATTCCACAAAAT+AGG | - | chr4_3:12344274-12344293 | None:intergenic | 35.0% | |
| ACAGTAGACTTGACATTGTT+TGG | - | chr4_3:12344294-12344313 | None:intergenic | 35.0% | |
| AACAATTCACTGCTATGTTC+AGG | + | chr4_3:12344403-12344422 | Msa0630440:CDS | 35.0% | |
| TGACATGTGATCTTGAATGA+AGG | + | chr4_3:12344596-12344615 | Msa0630440:exon | 35.0% | |
| AGAAGAACATGTCACAAGAT+GGG | - | chr4_3:12344874-12344893 | None:intergenic | 35.0% | |
| !! | GTCATTGATCTTTTGCTGTA+TGG | + | chr4_3:12344902-12344921 | Msa0630440:three_prime_UTR | 35.0% |
| CGTCAAATTCTTCACATCCA+AGG | + | chr4_3:12342084-12342103 | Msa0630440:CDS | 40.0% | |
| CAAATTCTTCACATCCAAGG+TGG | + | chr4_3:12342087-12342106 | Msa0630440:CDS | 40.0% | |
| ACCAAATCGGAGCAAAATTC+TGG | + | chr4_3:12342121-12342140 | Msa0630440:CDS | 40.0% | |
| CCAAATCGGAGCAAAATTCT+GGG | + | chr4_3:12342122-12342141 | Msa0630440:CDS | 40.0% | |
| GGTTCTTATGGATCTTGAAC+CGG | + | chr4_3:12342269-12342288 | Msa0630440:CDS | 40.0% | |
| GTTCTTATGGATCTTGAACC+GGG | + | chr4_3:12342270-12342289 | Msa0630440:CDS | 40.0% | |
| GGTCTAAAGATCTGACCATA+CGG | - | chr4_3:12342321-12342340 | None:intergenic | 40.0% | |
| GTATGGTCAGATCTTTAGAC+CGG | + | chr4_3:12342320-12342339 | Msa0630440:CDS | 40.0% | |
| !! | GCTAAAGGGCATTATACTGA+AGG | + | chr4_3:12342384-12342403 | Msa0630440:CDS | 40.0% |
| TGAGAATTGTGATTGCTTGC+AGG | + | chr4_3:12342452-12342471 | Msa0630440:CDS | 40.0% | |
| GAGAATTGTGATTGCTTGCA+GGG | + | chr4_3:12342453-12342472 | Msa0630440:CDS | 40.0% | |
| !!! | TTTGTGGCTGGTTTTTGCAA+TGG | + | chr4_3:12342978-12342997 | Msa0630440:intron | 40.0% |
| !!! | TTGTGGCTGGTTTTTGCAAT+GGG | + | chr4_3:12342979-12342998 | Msa0630440:intron | 40.0% |
| TCGTGGGTGATTCTTGTAAT+GGG | + | chr4_3:12343132-12343151 | Msa0630440:intron | 40.0% | |
| !! | GGTGATTCTTGTAATGGGTA+TGG | + | chr4_3:12343137-12343156 | Msa0630440:intron | 40.0% |
| !! | AGCCCTTTGTTATTGTTTGC+AGG | + | chr4_3:12343168-12343187 | Msa0630440:intron | 40.0% |
| !! | GCCCTTTGTTATTGTTTGCA+GGG | + | chr4_3:12343169-12343188 | Msa0630440:intron | 40.0% |
| ! | TTTCAAGTATGCCACTCACT+TGG | + | chr4_3:12343533-12343552 | Msa0630440:CDS | 40.0% |
| AAGTAAGCATCATCCTGTCT+GGG | - | chr4_3:12343616-12343635 | None:intergenic | 40.0% | |
| AAAGTAAGCATCATCCTGTC+TGG | - | chr4_3:12343617-12343636 | None:intergenic | 40.0% | |
| TGTCAGAAACCTTAGGAGAA+GGG | - | chr4_3:12343649-12343668 | None:intergenic | 40.0% | |
| AACAAGCTGATGAACAGAGA+GGG | - | chr4_3:12343696-12343715 | None:intergenic | 40.0% | |
| !! | ATTTTATTTGGCGGTGCAGT+TGG | + | chr4_3:12343901-12343920 | Msa0630440:intron | 40.0% |
| GTCAGCTTAACTCTGATCTT+AGG | + | chr4_3:12343986-12344005 | Msa0630440:CDS | 40.0% | |
| ACCATGAAAAAGTGAAGACG+CGG | - | chr4_3:12344039-12344058 | None:intergenic | 40.0% | |
| !!! | CGTCTTCACTTTTTCATGGT+TGG | + | chr4_3:12344039-12344058 | Msa0630440:CDS | 40.0% |
| ! | CACATTTGTTGAGTGAGTTC+AGG | - | chr4_3:12344117-12344136 | None:intergenic | 40.0% |
| CTGAACTCACTCAACAAATG+TGG | + | chr4_3:12344115-12344134 | Msa0630440:CDS | 40.0% | |
| CATTTGTTCATCAACCTCCT+TGG | - | chr4_3:12344226-12344245 | None:intergenic | 40.0% | |
| AATAGGAGGAGTTCTTGTTC+TGG | - | chr4_3:12344257-12344276 | None:intergenic | 40.0% | |
| ! | CAAGAACTCCTCCTATTTTG+TGG | + | chr4_3:12344260-12344279 | Msa0630440:CDS | 40.0% |
| ! | ACTCCTCCTATTTTGTGGAA+TGG | + | chr4_3:12344265-12344284 | Msa0630440:CDS | 40.0% |
| !! | AAGCCATTTTCAACCCTGTT+GGG | - | chr4_3:12344329-12344348 | None:intergenic | 40.0% |
| GAACATTTCCTGAATGGATG+TGG | - | chr4_3:12344370-12344389 | None:intergenic | 40.0% | |
| CATTCAGGAAATGTTCCGTA+GGG | + | chr4_3:12344374-12344393 | Msa0630440:CDS | 40.0% | |
| TGAATTGTTCACTCACCCTA+CGG | - | chr4_3:12344392-12344411 | None:intergenic | 40.0% | |
| TGAGAGCAACATGAATGATC+TGG | + | chr4_3:12344488-12344507 | Msa0630440:CDS | 40.0% | |
| !!! | TCTGTTTTGATGTGACCTGT+TGG | + | chr4_3:12344703-12344722 | Msa0630440:three_prime_UTR | 40.0% |
| CAGAAGAACATGTCACAAGA+TGG | - | chr4_3:12344875-12344894 | None:intergenic | 40.0% | |
| ! | CCCAGAATTTTGCTCCGATT+TGG | - | chr4_3:12342125-12342144 | None:intergenic | 45.0% |
| ! | GGTTGGATCGATTCCATGTT+CGG | - | chr4_3:12342160-12342179 | None:intergenic | 45.0% |
| GAACATGGAATCGATCCAAC+CGG | + | chr4_3:12342159-12342178 | Msa0630440:CDS | 45.0% | |
| ! | ACAATGAAGCAAGTGGTGGA+AGG | + | chr4_3:12342232-12342251 | Msa0630440:CDS | 45.0% |
| AGATCCATAAGAACCGCTCT+CGG | - | chr4_3:12342264-12342283 | None:intergenic | 45.0% | |
| CGGATACTATCCATAGTACC+CGG | - | chr4_3:12342291-12342310 | None:intergenic | 45.0% | |
| CGGGTACTATGGATAGTATC+CGG | + | chr4_3:12342289-12342308 | Msa0630440:CDS | 45.0% | |
| ACTATGGATAGTATCCGGTC+TGG | + | chr4_3:12342294-12342313 | Msa0630440:CDS | 45.0% | |
| CTGGGAATAACTGGGCTAAA+GGG | + | chr4_3:12342370-12342389 | Msa0630440:CDS | 45.0% | |
| !! | GTGTTGTGGTTGAAGTGTTG+AGG | + | chr4_3:12342786-12342805 | Msa0630440:intron | 45.0% |
| GTCGTGGGTGATTCTTGTAA+TGG | + | chr4_3:12343131-12343150 | Msa0630440:intron | 45.0% | |
| !! | TTCTGTGTGGTTTTCTAGGG+AGG | + | chr4_3:12343303-12343322 | Msa0630440:intron | 45.0% |
| !! | TCTGTGTGGTTTTCTAGGGA+GGG | + | chr4_3:12343304-12343323 | Msa0630440:intron | 45.0% |
| ! | CTCTGTTTTCCCTTCTCCTA+AGG | + | chr4_3:12343637-12343656 | Msa0630440:CDS | 45.0% |
| GTGTCAGAAACCTTAGGAGA+AGG | - | chr4_3:12343650-12343669 | None:intergenic | 45.0% | |
| TCCTAAGGTTTCTGACACTG+TGG | + | chr4_3:12343652-12343671 | Msa0630440:CDS | 45.0% | |
| ACCACAGTGTCAGAAACCTT+AGG | - | chr4_3:12343656-12343675 | None:intergenic | 45.0% | |
| ACAGAGAGGGTAGCATTGTA+GGG | - | chr4_3:12343683-12343702 | None:intergenic | 45.0% | |
| AACAGAGAGGGTAGCATTGT+AGG | - | chr4_3:12343684-12343703 | None:intergenic | 45.0% | |
| CAACAAGCTGATGAACAGAG+AGG | - | chr4_3:12343697-12343716 | None:intergenic | 45.0% | |
| GCGGAAGCAAATGTCATACA+AGG | - | chr4_3:12343756-12343775 | None:intergenic | 45.0% | |
| GGTTGCTGAGCTTCAAAATG+CGG | - | chr4_3:12343775-12343794 | None:intergenic | 45.0% | |
| AGCTAGCTAACGTACAGCTT+GGG | - | chr4_3:12343796-12343815 | None:intergenic | 45.0% | |
| TAGCTAGCTAACGTACAGCT+TGG | - | chr4_3:12343797-12343816 | None:intergenic | 45.0% | |
| GATCAGAGTTAAGCTGACCA+GGG | - | chr4_3:12343984-12344003 | None:intergenic | 45.0% | |
| AGATCAGAGTTAAGCTGACC+AGG | - | chr4_3:12343985-12344004 | None:intergenic | 45.0% | |
| AAAAAGTGAAGACGCGGGAA+AGG | - | chr4_3:12344033-12344052 | None:intergenic | 45.0% | |
| CCATGAAAAAGTGAAGACGC+GGG | - | chr4_3:12344038-12344057 | None:intergenic | 45.0% | |
| ACTTAGAGTCCTGTACTGCT+GGG | - | chr4_3:12344091-12344110 | None:intergenic | 45.0% | |
| AGCAGCACACATCATGTTCT+TGG | - | chr4_3:12344145-12344164 | None:intergenic | 45.0% | |
| TAAACATGGCTGAAGCAGTG+AGG | - | chr4_3:12344188-12344207 | None:intergenic | 45.0% | |
| ACTGCTTCAGCCATGTTTAG+AGG | + | chr4_3:12344189-12344208 | Msa0630440:CDS | 45.0% | |
| GCTCATCTTGCCTCTAAACA+TGG | - | chr4_3:12344202-12344221 | None:intergenic | 45.0% | |
| !! | AGCCATTTTCAACCCTGTTG+GGG | - | chr4_3:12344328-12344347 | None:intergenic | 45.0% |
| !! | GAAGCCATTTTCAACCCTGT+TGG | - | chr4_3:12344330-12344349 | None:intergenic | 45.0% |
| TGGAAACTCCACATCCATTC+AGG | + | chr4_3:12344359-12344378 | Msa0630440:CDS | 45.0% | |
| CCTACGGAACATTTCCTGAA+TGG | - | chr4_3:12344376-12344395 | None:intergenic | 45.0% | |
| CCATTCAGGAAATGTTCCGT+AGG | + | chr4_3:12344373-12344392 | Msa0630440:CDS | 45.0% | |
| CACTGCTATGTTCAGGAGAA+AGG | + | chr4_3:12344410-12344429 | Msa0630440:CDS | 45.0% | |
| GGAGAAAGGCTTTCTTGCAT+TGG | + | chr4_3:12344424-12344443 | Msa0630440:CDS | 45.0% | |
| ! | GCTTTCTTGCATTGGTACAC+TGG | + | chr4_3:12344432-12344451 | Msa0630440:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | + | chr4_3:12344438-12344457 | Msa0630440:CDS | 45.0% |
| TCCATACTCATCCTCATCAG+CGG | - | chr4_3:12344544-12344563 | None:intergenic | 45.0% | |
| TGATGAGGATGAGTATGGAG+AGG | + | chr4_3:12344545-12344564 | Msa0630440:CDS | 45.0% | |
| GATGAGTATGGAGAGGAAGA+GGG | + | chr4_3:12344552-12344571 | Msa0630440:CDS | 45.0% | |
| ! | TTGATGTGACCTGTTGGTAG+TGG | + | chr4_3:12344709-12344728 | Msa0630440:three_prime_UTR | 45.0% |
| TGTCTTTCTCCACTACCAAC+AGG | - | chr4_3:12344721-12344740 | None:intergenic | 45.0% | |
| TGTGAGTGTGAGAGAGGGTT+TGG | - | chr4_3:12341966-12341985 | None:intergenic | 50.0% | |
| ! | GAGAGTGTGAGTGTGAGAGA+GGG | - | chr4_3:12341971-12341990 | None:intergenic | 50.0% |
| ! | TGAGAGTGTGAGTGTGAGAG+AGG | - | chr4_3:12341972-12341991 | None:intergenic | 50.0% |
| GGCCAATGCGGTAACCAAAT+CGG | + | chr4_3:12342108-12342127 | Msa0630440:CDS | 50.0% | |
| !! | CTCCGATTTGGTTACCGCAT+TGG | - | chr4_3:12342113-12342132 | None:intergenic | 50.0% |
| ! | TGGAAGGTTTGTTCCGAGAG+CGG | + | chr4_3:12342248-12342267 | Msa0630440:CDS | 50.0% |
| TGTTCCGAGAGCGGTTCTTA+TGG | + | chr4_3:12342257-12342276 | Msa0630440:CDS | 50.0% | |
| GGATCTTGAACCGGGTACTA+TGG | + | chr4_3:12342278-12342297 | Msa0630440:CDS | 50.0% | |
| TGTTTGGTCAGAGTGGTGCT+GGG | + | chr4_3:12342352-12342371 | Msa0630440:CDS | 50.0% | |
| ! | AGAGTGGTGCTGGGAATAAC+TGG | + | chr4_3:12342361-12342380 | Msa0630440:CDS | 50.0% |
| ! | GAGTGGTGCTGGGAATAACT+GGG | + | chr4_3:12342362-12342381 | Msa0630440:CDS | 50.0% |
| GCTGGGAATAACTGGGCTAA+AGG | + | chr4_3:12342369-12342388 | Msa0630440:CDS | 50.0% | |
| CAAGTATGCCACTCACTTGG+TGG | + | chr4_3:12343536-12343555 | Msa0630440:CDS | 50.0% | |
| ! | ACTCACTTGGTGGAGGAACT+GGG | + | chr4_3:12343546-12343565 | Msa0630440:CDS | 50.0% |
| TCAGGGAAGAATACCCAGAC+AGG | + | chr4_3:12343600-12343619 | Msa0630440:CDS | 50.0% | |
| ! | GCTTGTTGAAAACGCAGACG+AGG | + | chr4_3:12343709-12343728 | Msa0630440:CDS | 50.0% |
| TGAAAACGCAGACGAGGTCA+TGG | + | chr4_3:12343715-12343734 | Msa0630440:CDS | 50.0% | |
| CTGATATCGGCAACCATGTC+TGG | + | chr4_3:12343937-12343956 | Msa0630440:CDS | 50.0% | |
| ACAACAGGTGACACCAGACA+TGG | - | chr4_3:12343953-12343972 | None:intergenic | 50.0% | |
| !! | CTGGTGTCACCTGTTGTTTG+AGG | + | chr4_3:12343956-12343975 | Msa0630440:CDS | 50.0% |
| ! | ACCTGTTGTTTGAGGTTCCC+TGG | + | chr4_3:12343964-12343983 | Msa0630440:CDS | 50.0% |
| ACCAGGGAACCTCAAACAAC+AGG | - | chr4_3:12343968-12343987 | None:intergenic | 50.0% | |
| !!! | CCCGCGTCTTCACTTTTTCA+TGG | + | chr4_3:12344035-12344054 | Msa0630440:CDS | 50.0% |
| ! | TTTGCTCCTTTGACTTCCCG+TGG | + | chr4_3:12344063-12344082 | Msa0630440:CDS | 50.0% |
| CACTTAGAGTCCTGTACTGC+TGG | - | chr4_3:12344092-12344111 | None:intergenic | 50.0% | |
| TAGAGGCAAGATGAGCACCA+AGG | + | chr4_3:12344206-12344225 | Msa0630440:CDS | 50.0% | |
| TCTGTGATATCCCCCCAACA+GGG | + | chr4_3:12344313-12344332 | Msa0630440:CDS | 50.0% | |
| ! | CCATTTTCAACCCTGTTGGG+GGG | - | chr4_3:12344326-12344345 | None:intergenic | 50.0% |
| !! | GCCATTTTCAACCCTGTTGG+GGG | - | chr4_3:12344327-12344346 | None:intergenic | 50.0% |
| TTGGTACACTGGTGAAGGCA+TGG | + | chr4_3:12344443-12344462 | Msa0630440:CDS | 50.0% | |
| GGACGAGATGGAATTCACTG+AGG | + | chr4_3:12344464-12344483 | Msa0630440:CDS | 50.0% | |
| ATACTCATCCTCATCAGCGG+TGG | - | chr4_3:12344541-12344560 | None:intergenic | 50.0% | |
| ACCGCTGATGAGGATGAGTA+TGG | + | chr4_3:12344540-12344559 | Msa0630440:CDS | 50.0% | |
| GGATGAGTATGGAGAGGAAG+AGG | + | chr4_3:12344551-12344570 | Msa0630440:CDS | 50.0% | |
| CACATCCAAGGTGGCCAATG+CGG | + | chr4_3:12342096-12342115 | Msa0630440:CDS | 55.0% | |
| GAAGTCGTTTGCGCCGAACA+TGG | + | chr4_3:12342144-12342163 | Msa0630440:CDS | 55.0% | |
| TGAATCACCGGTGTAGCGTC+CGG | - | chr4_3:12342181-12342200 | None:intergenic | 55.0% | |
| AGTATCCGGTCTGGACCGTA+TGG | + | chr4_3:12342303-12342322 | Msa0630440:CDS | 55.0% | |
| TCTGACCATACGGTCCAGAC+CGG | - | chr4_3:12342311-12342330 | None:intergenic | 55.0% | |
| GTGTTTGGTCAGAGTGGTGC+TGG | + | chr4_3:12342351-12342370 | Msa0630440:CDS | 55.0% | |
| ! | GTATGCCACTCACTTGGTGG+AGG | + | chr4_3:12343539-12343558 | Msa0630440:CDS | 55.0% |
| CAGTTCCTCCACCAAGTGAG+TGG | - | chr4_3:12343547-12343566 | None:intergenic | 55.0% | |
| ! | CACTCACTTGGTGGAGGAAC+TGG | + | chr4_3:12343545-12343564 | Msa0630440:CDS | 55.0% |
| TGGAGGAACTGGGTCTGGAA+TGG | + | chr4_3:12343556-12343575 | Msa0630440:CDS | 55.0% | |
| ! | GGAGGAACTGGGTCTGGAAT+GGG | + | chr4_3:12343557-12343576 | Msa0630440:CDS | 55.0% |
| ! | TGATGTGTGCTGCTGACCCT+AGG | + | chr4_3:12344151-12344170 | Msa0630440:CDS | 55.0% |
| !! | TGAGGTATCGCCCATGCCTA+GGG | - | chr4_3:12344170-12344189 | None:intergenic | 55.0% |
| AGGCAAGATGAGCACCAAGG+AGG | + | chr4_3:12344209-12344228 | Msa0630440:CDS | 55.0% | |
| GTCTGTGATATCCCCCCAAC+AGG | + | chr4_3:12344312-12344331 | Msa0630440:CDS | 55.0% | |
| CCCCCCAACAGGGTTGAAAA+TGG | + | chr4_3:12344323-12344342 | Msa0630440:CDS | 55.0% | |
| ! | TGGTGAAGGCATGGACGAGA+TGG | + | chr4_3:12344452-12344471 | Msa0630440:CDS | 55.0% |
| TGGAGAGGAAGAGGGTGAAG+AGG | + | chr4_3:12344560-12344579 | Msa0630440:CDS | 55.0% | |
| ! | GGTTACCGCATTGGCCACCT+TGG | - | chr4_3:12342104-12342123 | None:intergenic | 60.0% |
| GATCCAACCGGACGCTACAC+CGG | + | chr4_3:12342171-12342190 | Msa0630440:CDS | 60.0% | |
| CTTGGTGGAGGAACTGGGTC+TGG | + | chr4_3:12343551-12343570 | Msa0630440:CDS | 60.0% | |
| TGGGAGCCACGGGAAGTCAA+AGG | - | chr4_3:12344072-12344091 | None:intergenic | 60.0% | |
| TCCTGTACTGCTGGGAGCCA+CGG | - | chr4_3:12344083-12344102 | None:intergenic | 60.0% | |
| ! | TGTGCTGCTGACCCTAGGCA+TGG | + | chr4_3:12344156-12344175 | Msa0630440:CDS | 60.0% |
| ! | GTGCTGCTGACCCTAGGCAT+GGG | + | chr4_3:12344157-12344176 | Msa0630440:CDS | 60.0% |
| !! | GTGAGGTATCGCCCATGCCT+AGG | - | chr4_3:12344171-12344190 | None:intergenic | 60.0% |
| CCTCATCAGCGGTGGCATCT+TGG | - | chr4_3:12344533-12344552 | None:intergenic | 60.0% | |
| CCAAGATGCCACCGCTGATG+AGG | + | chr4_3:12344530-12344549 | Msa0630440:CDS | 60.0% | |
| TCACCGGTGTAGCGTCCGGT+TGG | - | chr4_3:12342177-12342196 | None:intergenic | 65.0% | |
| CCTGTACTGCTGGGAGCCAC+GGG | - | chr4_3:12344082-12344101 | None:intergenic | 65.0% | |
| CCCGTGGCTCCCAGCAGTAC+AGG | + | chr4_3:12344079-12344098 | Msa0630440:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 12341924 | 12344939 | 12341924 | ID=Msa0630440;Name=Msa0630440 |
| chr4_3 | mRNA | 12341924 | 12344939 | 12341924 | ID=Msa0630440-mRNA-1;Parent=Msa0630440;Name=Msa0630440-mRNA-1;_AED=0.03;_eAED=0.03;_QI=157|1|1|1|1|1|3|334|449 |
| chr4_3 | exon | 12341924 | 12342474 | 12341924 | ID=Msa0630440-mRNA-1:exon:3622;Parent=Msa0630440-mRNA-1 |
| chr4_3 | exon | 12343531 | 12343800 | 12343531 | ID=Msa0630440-mRNA-1:exon:3623;Parent=Msa0630440-mRNA-1 |
| chr4_3 | exon | 12343920 | 12344939 | 12343920 | ID=Msa0630440-mRNA-1:exon:3624;Parent=Msa0630440-mRNA-1 |
| chr4_3 | five_prime_UTR | 12341924 | 12342080 | 12341924 | ID=Msa0630440-mRNA-1:five_prime_utr;Parent=Msa0630440-mRNA-1 |
| chr4_3 | CDS | 12342081 | 12342474 | 12342081 | ID=Msa0630440-mRNA-1:cds;Parent=Msa0630440-mRNA-1 |
| chr4_3 | CDS | 12343531 | 12343800 | 12343531 | ID=Msa0630440-mRNA-1:cds;Parent=Msa0630440-mRNA-1 |
| chr4_3 | CDS | 12343920 | 12344605 | 12343920 | ID=Msa0630440-mRNA-1:cds;Parent=Msa0630440-mRNA-1 |
| chr4_3 | three_prime_UTR | 12344606 | 12344939 | 12344606 | ID=Msa0630440-mRNA-1:three_prime_utr;Parent=Msa0630440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
