Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164660 | XP_003625812.1 | 97.374 | 495 | 12 | 1 | 1 | 495 | 1 | 494 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164660 | sp|O82533|FTZ21_ARATH | 74.338 | 491 | 104 | 6 | 8 | 494 | 5 | 477 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164660 | G7L633 | 97.374 | 495 | 12 | 1 | 1 | 495 | 1 | 494 | 0.0 | 976 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0829800 | Msa1164660 | 0.805320 | 1.413439e-49 | -8.615850e-47 |
| Msa0143180 | Msa1164660 | 0.992321 | 1.357716e-192 | -8.615850e-47 |
| Msa1125620 | Msa1164660 | 0.892290 | 1.819207e-74 | -8.615850e-47 |
| Msa1164660 | Msa1336120 | 0.818189 | 2.232361e-52 | -8.615850e-47 |
| Msa1164660 | Msa1386160 | 0.993242 | 2.135981e-198 | -8.615850e-47 |
| Msa1164660 | Msa1422290 | 0.802068 | 6.686920e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164660 | MtrunA17_Chr7g0266231 | 97.374 | 495 | 12 | 1 | 1 | 495 | 1 | 494 | 0.0 | 976 |
| Msa1164660 | MtrunA17_Chr1g0178661 | 77.218 | 496 | 91 | 8 | 8 | 494 | 1 | 483 | 0.0 | 671 |
| Msa1164660 | MtrunA17_Chr3g0100581 | 61.290 | 310 | 118 | 1 | 135 | 444 | 54 | 361 | 6.45e-111 | 335 |
| Msa1164660 | MtrunA17_Chr5g0445051 | 58.644 | 295 | 119 | 2 | 151 | 444 | 74 | 366 | 5.94e-108 | 327 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164660 | AT2G36250.2 | 74.338 | 491 | 104 | 6 | 8 | 494 | 5 | 477 | 0.0 | 652 |
| Msa1164660 | AT2G36250.3 | 74.338 | 491 | 104 | 6 | 8 | 494 | 5 | 477 | 0.0 | 652 |
| Msa1164660 | AT2G36250.1 | 74.338 | 491 | 104 | 6 | 8 | 494 | 5 | 477 | 0.0 | 652 |
| Msa1164660 | AT3G52750.3 | 72.746 | 488 | 112 | 6 | 8 | 494 | 5 | 472 | 0.0 | 642 |
| Msa1164660 | AT3G52750.2 | 72.746 | 488 | 112 | 6 | 8 | 494 | 5 | 472 | 0.0 | 642 |
| Msa1164660 | AT3G52750.1 | 72.746 | 488 | 112 | 6 | 8 | 494 | 5 | 472 | 0.0 | 642 |
| Msa1164660 | AT2G36250.4 | 84.211 | 399 | 59 | 2 | 97 | 494 | 1 | 396 | 0.0 | 617 |
| Msa1164660 | AT3G52750.4 | 68.627 | 357 | 91 | 6 | 8 | 363 | 5 | 341 | 4.60e-146 | 422 |
| Msa1164660 | AT5G55280.1 | 56.000 | 350 | 142 | 4 | 95 | 444 | 42 | 379 | 1.19e-107 | 327 |
Find 180 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCACTGCTAATTTAATATT+TGG | 0.110302 | 7_4:-56358021 | Msa1164660:CDS |
| TTTACCACTGCATCAATATT+AGG | 0.115543 | 7_4:-56356960 | Msa1164660:three_prime_UTR |
| CTTCCTCGAGTATGAAATTT+TGG | 0.153986 | 7_4:-56356685 | Msa1164660:three_prime_UTR |
| CCTTTCTTCTTTAAGAATTC+CGG | 0.207755 | 7_4:+56357046 | None:intergenic |
| TCAATACAAGAGGCGGTTTA+TGG | 0.232431 | 7_4:-56361601 | Msa1164660:CDS |
| TAATGCAGGTTCTTCACTTA+TGG | 0.232861 | 7_4:-56359552 | Msa1164660:CDS |
| GGACCAACACTGTGCGAATT+TGG | 0.235876 | 7_4:+56362027 | None:intergenic |
| AAAATTAATGAAAATAAGTT+TGG | 0.239550 | 7_4:-56362108 | Msa1164660:CDS |
| GCAGGGGTGCTTGCTGTTAA+TGG | 0.239998 | 7_4:-56362183 | Msa1164660:CDS |
| AAGCACCCCTGCTGAATTTC+TGG | 0.255111 | 7_4:+56362194 | None:intergenic |
| TTACCACTGCATCAATATTA+GGG | 0.257100 | 7_4:-56356959 | Msa1164660:three_prime_UTR |
| TGTCATTTGGAATAACTATC+AGG | 0.257169 | 7_4:+56360112 | None:intergenic |
| AGGACCTAAAATTGCTATAA+AGG | 0.267143 | 7_4:+56356895 | None:intergenic |
| CACTTTCACTGATGGTAGTT+TGG | 0.270519 | 7_4:-56357077 | Msa1164660:CDS |
| AGATTGAATGCTTCAGTTAC+AGG | 0.271861 | 7_4:+56360060 | None:intergenic |
| GTTATTGGTGTGGGTGGTGG+TGG | 0.281129 | 7_4:-56361823 | Msa1164660:CDS |
| CCTGAGATTTCGATGCTTAG+AGG | 0.292393 | 7_4:-56361967 | Msa1164660:CDS |
| CGATGAATGGTGTGGAGTTT+TGG | 0.299318 | 7_4:-56361768 | Msa1164660:CDS |
| GAAGCAAAGATTAAGGTTAT+TGG | 0.303876 | 7_4:-56361838 | Msa1164660:CDS |
| TTATAATGAAGCAAAGATTA+AGG | 0.307633 | 7_4:-56361845 | Msa1164660:CDS |
| GGCGGTTTATGGAGCTGATA+TGG | 0.325227 | 7_4:-56361590 | Msa1164660:CDS |
| TACAAGGAATTAAAGAAGTT+GGG | 0.325613 | 7_4:+56356987 | None:intergenic |
| GATTGTTAATACTGATGTTC+AGG | 0.330888 | 7_4:-56361746 | Msa1164660:CDS |
| TGCCGATGTTAGAGCTATAA+TGG | 0.340769 | 7_4:-56359576 | Msa1164660:CDS |
| TAACAAGCCCTGACCATTAC+TGG | 0.348539 | 7_4:+56356774 | None:intergenic |
| CTTTCTTCTTTAAGAATTCC+GGG | 0.348604 | 7_4:+56357047 | None:intergenic |
| TGGAAAGTTCTTAGCTTTCA+TGG | 0.354898 | 7_4:+56356866 | None:intergenic |
| AAGGTTATTGGTGTGGGTGG+TGG | 0.356161 | 7_4:-56361826 | Msa1164660:CDS |
| AATGCAGGTTCTTCACTTAT+GGG | 0.360231 | 7_4:-56359551 | Msa1164660:CDS |
| GCTGGAATGGGTGGAGGAAC+TGG | 0.363731 | 7_4:-56360285 | Msa1164660:CDS |
| CAAAGTGTGGAAGATGCAAT+TGG | 0.365810 | 7_4:+56362308 | None:intergenic |
| TGGCATTTCTGATATTATTA+CGG | 0.367696 | 7_4:-56360007 | Msa1164660:intron |
| GCAGTAAGCAACTTGTCATT+TGG | 0.370958 | 7_4:+56360099 | None:intergenic |
| ACAACCCCTTTCTCGTTTGA+AGG | 0.376860 | 7_4:-56360195 | Msa1164660:CDS |
| AGCCTCAAAACACACAAGTT+TGG | 0.378956 | 7_4:+56356846 | None:intergenic |
| CTCTATACCAATATCTAGTA+AGG | 0.381039 | 7_4:+56358931 | None:intergenic |
| GGAATTCGCAGGTGCAAAAC+AGG | 0.392685 | 7_4:+56362215 | None:intergenic |
| GGACCTAAAATTGCTATAAA+GGG | 0.394750 | 7_4:+56356896 | None:intergenic |
| GGTGCAGCTCCGGTTATTGC+TGG | 0.401104 | 7_4:-56360258 | Msa1164660:CDS |
| ATACAAGGAATTAAAGAAGT+TGG | 0.401561 | 7_4:+56356986 | None:intergenic |
| AGAAAATACCAGTAATGGTC+AGG | 0.403024 | 7_4:-56356782 | Msa1164660:three_prime_UTR |
| GGAAAAGAGTATTAAGCTCT+TGG | 0.405038 | 7_4:+56357010 | None:intergenic |
| ATGGATTGAAGACGATGTAT+TGG | 0.409763 | 7_4:+56362571 | None:intergenic |
| CAGTCACCCTTACTAGATAT+TGG | 0.416517 | 7_4:-56358938 | Msa1164660:CDS |
| GGTATCAACATTGTCTCTTA+AGG | 0.417783 | 7_4:+56360134 | None:intergenic |
| CGTGTAAGCTCTTGACCAAT+TGG | 0.419230 | 7_4:+56361685 | None:intergenic |
| TAGGGGTAGAGTTAAACATT+TGG | 0.422128 | 7_4:-56356941 | Msa1164660:three_prime_UTR |
| TGGATTGAAGACGATGTATT+GGG | 0.426517 | 7_4:+56362572 | None:intergenic |
| CGCCTGTCAATTCTGAGAAC+CGG | 0.428266 | 7_4:-56361711 | Msa1164660:CDS |
| TGCTGGTATCACAAAGTCAA+TGG | 0.432173 | 7_4:-56360241 | Msa1164660:CDS |
| ACCTTCTTCAAGTAAGCTAC+TGG | 0.435272 | 7_4:-56356739 | Msa1164660:three_prime_UTR |
| AACTGGCACTGGTGCAGCTC+CGG | 0.436776 | 7_4:-56360268 | Msa1164660:CDS |
| GAGTTTCGATACTGTAAGAA+TGG | 0.438083 | 7_4:-56362241 | Msa1164660:CDS |
| GCCGTCCTTCAAACGAGAAA+GGG | 0.446918 | 7_4:+56360190 | None:intergenic |
| TTGTTTCAAGTGAAGTCGAC+AGG | 0.449273 | 7_4:-56362054 | Msa1164660:CDS |
| CAAACTACCATCAGTGAAAG+TGG | 0.455244 | 7_4:+56357078 | None:intergenic |
| CAAGAGCTTACACGAGGTCT+TGG | 0.455364 | 7_4:-56361676 | Msa1164660:CDS |
| ATGGGTGGAGGAACTGGCAC+TGG | 0.457183 | 7_4:-56360279 | Msa1164660:CDS |
| CAACTCTACGCGTCCGAGAA+AGG | 0.457651 | 7_4:-56361923 | Msa1164660:CDS |
| TCTTGGTGCTGGTGGTAATC+CGG | 0.460691 | 7_4:-56361659 | Msa1164660:CDS |
| CCACCGGACATATCCTTTCT+CGG | 0.465397 | 7_4:+56361910 | None:intergenic |
| TGGTAGTTTGGTTGAGATCC+CGG | 0.466070 | 7_4:-56357065 | Msa1164660:CDS |
| TCTGAGAACCGGTTGCCAAT+TGG | 0.466227 | 7_4:-56361700 | Msa1164660:CDS |
| GGAATTGTATGGAACATAAC+TGG | 0.468139 | 7_4:-56358899 | Msa1164660:CDS |
| GGGTCTTTGCTATGATGATA+AGG | 0.472830 | 7_4:+56362006 | None:intergenic |
| AGATCCATCACTTAGTGGTC+AGG | 0.473550 | 7_4:-56357989 | Msa1164660:intron |
| CGCCGTCCTTCAAACGAGAA+AGG | 0.476604 | 7_4:+56360189 | None:intergenic |
| TCTCGTTTGAAGGACGGCGG+AGG | 0.481078 | 7_4:-56360185 | Msa1164660:CDS |
| TCCAAATATTAAATTAGCAG+TGG | 0.484386 | 7_4:+56358020 | None:intergenic |
| GCTCTTGACCAATTGGCAAC+CGG | 0.487109 | 7_4:+56361692 | None:intergenic |
| GTAATAGATCCATCACTTAG+TGG | 0.487207 | 7_4:-56357994 | Msa1164660:CDS |
| TTATTGGTGTGGGTGGTGGT+GGG | 0.491634 | 7_4:-56361822 | Msa1164660:CDS |
| TCGTCTTCAATCCATTCCTC+AGG | 0.492978 | 7_4:-56362563 | Msa1164660:intron |
| GATTGAATGCTTCAGTTACA+GGG | 0.493075 | 7_4:+56360061 | None:intergenic |
| ATGGGGATAGGAACTGCAAC+TGG | 0.495317 | 7_4:-56359533 | Msa1164660:intron |
| CCCCTTTCTCGTTTGAAGGA+CGG | 0.496549 | 7_4:-56360191 | Msa1164660:CDS |
| CCTCTAAGCATCGAAATCTC+AGG | 0.496744 | 7_4:+56361967 | None:intergenic |
| AGCATAACATTGATTGCTAC+GGG | 0.497378 | 7_4:-56357261 | Msa1164660:CDS |
| TTTGTGATACCAGCAATAAC+CGG | 0.498131 | 7_4:+56360249 | None:intergenic |
| CTTAGAGGTGAAGGAAGTAG+TGG | 0.499966 | 7_4:-56361952 | Msa1164660:CDS |
| CAATATCTAGTAAGGGTGAC+TGG | 0.502388 | 7_4:+56358939 | None:intergenic |
| CCGGAATTCTTAAAGAAGAA+AGG | 0.504581 | 7_4:-56357046 | Msa1164660:CDS |
| AAGTGATCTGACCTTGTTTG+AGG | 0.505103 | 7_4:-56358873 | Msa1164660:intron |
| GCAGCATTCATACCAATCTC+CGG | 0.506208 | 7_4:+56361640 | None:intergenic |
| GCTGAATTTCTGGAATTCGC+AGG | 0.506414 | 7_4:+56362204 | None:intergenic |
| AGAGGGCCACTGGAATTGTA+TGG | 0.506651 | 7_4:-56358910 | Msa1164660:CDS |
| CTCGTTTGAAGGACGGCGGA+GGG | 0.507764 | 7_4:-56360184 | Msa1164660:CDS |
| TGTAACTGAAGCATTCAATC+TGG | 0.508474 | 7_4:-56360058 | Msa1164660:CDS |
| ATCTCCTTGTGTGAGTTGAC+TGG | 0.510362 | 7_4:+56357123 | None:intergenic |
| TTGTAGGCTGGAATGGGTGG+AGG | 0.510444 | 7_4:-56360291 | Msa1164660:intron |
| ACCAGTAGCTTACTTGAAGA+AGG | 0.511076 | 7_4:+56356738 | None:intergenic |
| CGATCTTCCACTTTCACTGA+TGG | 0.512204 | 7_4:-56357085 | Msa1164660:CDS |
| CCAAATATTAAATTAGCAGT+GGG | 0.513309 | 7_4:+56358021 | None:intergenic |
| AGTGAGTGAGTGAAGGAAAA+CGG | 0.514283 | 7_4:+56362618 | None:intergenic |
| AAAGATTAAGGTTATTGGTG+TGG | 0.515818 | 7_4:-56361833 | Msa1164660:CDS |
| GGTTCTTCACTTATGGGGAT+AGG | 0.522575 | 7_4:-56359545 | Msa1164660:CDS |
| GCGAATTCCAGAAATTCAGC+AGG | 0.523863 | 7_4:-56362201 | Msa1164660:CDS |
| TCCGGTGGAGATGTGGTCGA+AGG | 0.524405 | 7_4:-56361895 | Msa1164660:CDS |
| TACAGAGAAAATACCAGTAA+TGG | 0.525695 | 7_4:-56356787 | Msa1164660:three_prime_UTR |
| AAGATTAAGGTTATTGGTGT+GGG | 0.526325 | 7_4:-56361832 | Msa1164660:CDS |
| ATTTCGATGCTTAGAGGTGA+AGG | 0.527070 | 7_4:-56361961 | Msa1164660:CDS |
| GCTGGTATCACAAAGTCAAT+GGG | 0.528789 | 7_4:-56360240 | Msa1164660:CDS |
| TGAAGGAAAACGGTGATTGA+TGG | 0.534962 | 7_4:+56362628 | None:intergenic |
| TGGAGATGTGGTCGAAGGGT+TGG | 0.537479 | 7_4:-56361890 | Msa1164660:CDS |
| ACAAGGAATTAAAGAAGTTG+GGG | 0.540607 | 7_4:+56356988 | None:intergenic |
| AAGTGAAGCGAGACCCGTAC+AGG | 0.541037 | 7_4:-56357220 | Msa1164660:intron |
| GTTATTTAAATGCAGATACC+CGG | 0.548808 | 7_4:-56359617 | Msa1164660:intron |
| ATTGGTATAGAGAGGGCCAC+TGG | 0.549167 | 7_4:-56358920 | Msa1164660:CDS |
| ATTCTGCGACAAGGTGTTCG+TGG | 0.550129 | 7_4:-56360027 | Msa1164660:CDS |
| GAATGGAACCAAAGAAAATG+AGG | 0.554829 | 7_4:+56362653 | None:intergenic |
| TTTGCTTCATTATAATTACT+CGG | 0.555041 | 7_4:+56361853 | None:intergenic |
| CTTAGCTTTCATGGACAACA+AGG | 0.555893 | 7_4:+56356875 | None:intergenic |
| AAAATGAGAAATTCAAAGTG+TGG | 0.559812 | 7_4:+56362295 | None:intergenic |
| GGAAGAAAGAACCTGAGGAA+TGG | 0.563392 | 7_4:+56362552 | None:intergenic |
| AACCGGTTCTCAGAATTGAC+AGG | 0.563659 | 7_4:+56361709 | None:intergenic |
| CTTACCTGACCACTAAGTGA+TGG | 0.565428 | 7_4:+56357985 | None:intergenic |
| GTCATTTGGAATAACTATCA+GGG | 0.565686 | 7_4:+56360113 | None:intergenic |
| CGTCCGAGAAAGGATATGTC+CGG | 0.566891 | 7_4:-56361913 | Msa1164660:CDS |
| AATTAGCAGTGGGGTCTACA+AGG | 0.567960 | 7_4:+56358031 | None:intergenic |
| CATTTCGTTATCAAGAACAA+TGG | 0.570737 | 7_4:-56362710 | Msa1164660:five_prime_UTR |
| AAAGTGTGGAAGATGCAATT+GGG | 0.571201 | 7_4:+56362309 | None:intergenic |
| CCCTTCGACCACATCTCCAC+CGG | 0.573793 | 7_4:+56361894 | None:intergenic |
| GGGTTAAGACATACCTGTAC+GGG | 0.573796 | 7_4:+56357207 | None:intergenic |
| CTTACACGAGGTCTTGGTGC+TGG | 0.574946 | 7_4:-56361670 | Msa1164660:CDS |
| GGAAGATCGCCGACTGACAA+CGG | 0.574950 | 7_4:+56357099 | None:intergenic |
| GGATATGTCCGGTGGAGATG+TGG | 0.576767 | 7_4:-56361902 | Msa1164660:CDS |
| GCTGGTGGTAATCCGGAGAT+TGG | 0.577631 | 7_4:-56361652 | Msa1164660:CDS |
| TACTAGATATTGGTATAGAG+AGG | 0.578242 | 7_4:-56358928 | Msa1164660:CDS |
| GAGCATAACATTGATTGCTA+CGG | 0.579728 | 7_4:-56357262 | Msa1164660:CDS |
| TACCCCTAATATTGATGCAG+TGG | 0.580979 | 7_4:+56356956 | None:intergenic |
| AACGGTGATTGATGGTGGAA+TGG | 0.581223 | 7_4:+56362636 | None:intergenic |
| TTAAATGCAGATACCCGGGT+TGG | 0.583340 | 7_4:-56359612 | Msa1164660:intron |
| AGAGCTATAATGGCTAATGC+AGG | 0.588135 | 7_4:-56359566 | Msa1164660:CDS |
| GTCGTATATAACTTCTGCTG+CGG | 0.589202 | 7_4:+56358053 | None:intergenic |
| ACACGAGGTCTTGGTGCTGG+TGG | 0.589485 | 7_4:-56361667 | Msa1164660:CDS |
| ATGCAGGTTCTTCACTTATG+GGG | 0.590064 | 7_4:-56359550 | Msa1164660:CDS |
| AGGAAAACGGTGATTGATGG+TGG | 0.594010 | 7_4:+56362631 | None:intergenic |
| ATTAAGGTTATTGGTGTGGG+TGG | 0.596357 | 7_4:-56361829 | Msa1164660:CDS |
| AGCCATTATAGCTCTAACAT+CGG | 0.596517 | 7_4:+56359574 | None:intergenic |
| GGGGTTAAGACATACCTGTA+CGG | 0.601158 | 7_4:+56357206 | None:intergenic |
| AAGTAAAGAGTCAATACAAG+AGG | 0.601747 | 7_4:-56361611 | Msa1164660:CDS |
| TTACCAAATTCGCACAGTGT+TGG | 0.602529 | 7_4:-56362030 | Msa1164660:CDS |
| TCAATGGGTATACTAACTGT+TGG | 0.603720 | 7_4:-56360225 | Msa1164660:CDS |
| TCTATACCAATATCTAGTAA+GGG | 0.604464 | 7_4:+56358932 | None:intergenic |
| TCGAGTGAGTGAGTGAGTGA+AGG | 0.608469 | 7_4:+56362611 | None:intergenic |
| GGTGTTAACAACAGAAAGTG+TGG | 0.611534 | 7_4:-56362078 | Msa1164660:CDS |
| CCACCAAAATTTCATACTCG+AGG | 0.614376 | 7_4:+56356682 | None:intergenic |
| GAAAATACCAGTAATGGTCA+GGG | 0.617023 | 7_4:-56356781 | Msa1164660:three_prime_UTR |
| TAAAGAGTCAATACAAGAGG+CGG | 0.618334 | 7_4:-56361608 | Msa1164660:CDS |
| AGGGCAGTTCAAGCACAAGA+AGG | 0.618926 | 7_4:-56360165 | Msa1164660:CDS |
| ACTAGATATTGGTATAGAGA+GGG | 0.622162 | 7_4:-56358927 | Msa1164660:CDS |
| AAAGTCGACATTCACCAACC+CGG | 0.625860 | 7_4:+56359598 | None:intergenic |
| ATGATTGAGAGTTCGATGAA+TGG | 0.627081 | 7_4:-56361781 | Msa1164660:CDS |
| TGCAGTGGTAAAGAAATACA+AGG | 0.629824 | 7_4:+56356971 | None:intergenic |
| CTTTCTCGTTTGAAGGACGG+CGG | 0.630792 | 7_4:-56360188 | Msa1164660:CDS |
| TTATTTAAATGCAGATACCC+GGG | 0.634762 | 7_4:-56359616 | Msa1164660:intron |
| CCGGTGGAGATGTGGTCGAA+GGG | 0.635066 | 7_4:-56361894 | Msa1164660:CDS |
| CCGTCCTTCAAACGAGAAAG+GGG | 0.635157 | 7_4:+56360191 | None:intergenic |
| TACCACTGCATCAATATTAG+GGG | 0.635255 | 7_4:-56356958 | Msa1164660:three_prime_UTR |
| TTGTATTGAAGGGAAAACGA+GGG | 0.636472 | 7_4:-56358987 | Msa1164660:intron |
| AAGTCGACATTCACCAACCC+GGG | 0.639911 | 7_4:+56359599 | None:intergenic |
| CGAATTCCAGAAATTCAGCA+GGG | 0.647094 | 7_4:-56362200 | Msa1164660:CDS |
| TACGGGATTCAAGCGTCAAG+AGG | 0.648241 | 7_4:-56357244 | Msa1164660:CDS |
| CCGAGAAAGGATATGTCCGG+TGG | 0.651747 | 7_4:-56361910 | Msa1164660:CDS |
| TATGTTCCATACAATTCCAG+TGG | 0.652303 | 7_4:+56358904 | None:intergenic |
| TGTTTCAAGTGAAGTCGACA+GGG | 0.654076 | 7_4:-56362053 | Msa1164660:CDS |
| CAGGCCAGTCAACTCACACA+AGG | 0.654525 | 7_4:-56357127 | Msa1164660:CDS |
| TGAGAGTTCGATGAATGGTG+TGG | 0.654606 | 7_4:-56361776 | Msa1164660:CDS |
| AATGGAACCAAAGAAAATGA+GGG | 0.656068 | 7_4:+56362654 | None:intergenic |
| GGGGTGCTTGCTGTTAATGG+AGG | 0.662779 | 7_4:-56362180 | Msa1164660:CDS |
| ATTGAATGCTTCAGTTACAG+GGG | 0.680898 | 7_4:+56360062 | None:intergenic |
| TTTGTATTGAAGGGAAAACG+AGG | 0.683065 | 7_4:-56358988 | Msa1164660:intron |
| AAGGAGATACCGTTGTCAGT+CGG | 0.686727 | 7_4:-56357108 | Msa1164660:CDS |
| GTAGCTAACTACCTCAAACA+AGG | 0.689337 | 7_4:+56358862 | None:intergenic |
| CAAGGAATTAAAGAAGTTGG+GGG | 0.689607 | 7_4:+56356989 | None:intergenic |
| GAATTCCAGAAATTCAGCAG+GGG | 0.694289 | 7_4:-56362199 | Msa1164660:CDS |
| CAAATATTAAATTAGCAGTG+GGG | 0.711632 | 7_4:+56358022 | None:intergenic |
| ATTGTATGGAACATAACTGG+TGG | 0.718370 | 7_4:-56358896 | Msa1164660:CDS |
| GCTGATGATATTCTGCGACA+AGG | 0.719167 | 7_4:-56360036 | Msa1164660:CDS |
| ATTGGTCAAGAGCTTACACG+AGG | 0.768210 | 7_4:-56361682 | Msa1164660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTGAGATATTATTTA+GGG | + | chr7_4:56357016-56357035 | None:intergenic | 10.0% |
| !! | TAATAATTGAGATATTATTT+AGG | + | chr7_4:56357017-56357036 | None:intergenic | 10.0% |
| !!! | TTATTATTATTTTCATTAAC+AGG | - | chr7_4:56357040-56357059 | Msa1164660:CDS | 10.0% |
| !! | AAAATTAATGAAAATAAGTT+TGG | - | chr7_4:56357275-56357294 | Msa1164660:intron | 10.0% |
| !!! | ATTTTTAAATTAGTTTTATG+TGG | - | chr7_4:56358890-56358909 | Msa1164660:CDS | 10.0% |
| !! | ATTTAAATAACATAATTAAC+AGG | + | chr7_4:56359757-56359776 | None:intergenic | 10.0% |
| !! | TAAATTAACATATATCTAAT+AGG | - | chr7_4:56360774-56360793 | Msa1164660:intron | 10.0% |
| !! | AAATTAACATATATCTAATA+GGG | - | chr7_4:56360775-56360794 | Msa1164660:intron | 10.0% |
| !! | AAATAACTAGAATATTTATA+TGG | + | chr7_4:56360858-56360877 | None:intergenic | 10.0% |
| !!! | TAAATATTCTAGTTATTTTT+AGG | - | chr7_4:56360860-56360879 | Msa1164660:intron | 10.0% |
| !! | AAACTAATTTAAAAATGCAT+AGG | + | chr7_4:56358886-56358905 | None:intergenic | 15.0% |
| !!! | AAATCAAAACTTATTTTTGT+AGG | - | chr7_4:56359076-56359095 | Msa1164660:intron | 15.0% |
| !! | TTAGTTAATACAAAAACTAA+TGG | + | chr7_4:56359614-56359633 | None:intergenic | 15.0% |
| !! | ATCCAAAAAAAACAATTTAA+AGG | - | chr7_4:56360135-56360154 | Msa1164660:CDS | 15.0% |
| !!! | AACCTTTAAATTGTTTTTTT+TGG | + | chr7_4:56360140-56360159 | None:intergenic | 15.0% |
| !! | AATTAACATATATCTAATAG+GGG | - | chr7_4:56360776-56360795 | Msa1164660:intron | 15.0% |
| !!! | GGTTAACATTTAAAATTATT+GGG | + | chr7_4:56360901-56360920 | None:intergenic | 15.0% |
| !!! | TGGTTAACATTTAAAATTAT+TGG | + | chr7_4:56360902-56360921 | None:intergenic | 15.0% |
| !!! | CAGTTAAAAAAAAAAACTTT+TGG | + | chr7_4:56360922-56360941 | None:intergenic | 15.0% |
| !!! | ATTTTCTTTTTTCAATTACT+TGG | - | chr7_4:56361013-56361032 | Msa1164660:intron | 15.0% |
| !! | ATAAAATTGTGTACTAAAAA+AGG | - | chr7_4:56361918-56361937 | Msa1164660:CDS | 15.0% |
| !! | TAAAATTGTGTACTAAAAAA+GGG | - | chr7_4:56361919-56361938 | Msa1164660:CDS | 15.0% |
| !! | ATTAAAGCGAATTAATTGTA+GGG | + | chr7_4:56356954-56356973 | None:intergenic | 20.0% |
| !! | TAATTAAGTAACTAACTAAC+TGG | + | chr7_4:56356982-56357001 | None:intergenic | 20.0% |
| !!! | TGAAAATAAGTTTGGATTTT+CGG | - | chr7_4:56357283-56357302 | Msa1164660:intron | 20.0% |
| !! | TTTGCTTCATTATAATTACT+CGG | + | chr7_4:56357533-56357552 | None:intergenic | 20.0% |
| !! | TTATAATGAAGCAAAGATTA+AGG | - | chr7_4:56357538-56357557 | Msa1164660:intron | 20.0% |
| !!! | CTACATTACAGTTTTATATT+TGG | - | chr7_4:56357862-56357881 | Msa1164660:intron | 20.0% |
| !! | TTAAATAATACTAGACTGTT+GGG | - | chr7_4:56358300-56358319 | Msa1164660:intron | 20.0% |
| !! | TTTATTTAAGTGAAGAAGTT+TGG | + | chr7_4:56358417-56358436 | None:intergenic | 20.0% |
| !!! | TTCTTCTTCTAAAATTCAAA+AGG | + | chr7_4:56358920-56358939 | None:intergenic | 20.0% |
| !! | AGGTTTCAGAAATATTATTT+GGG | + | chr7_4:56359937-56359956 | None:intergenic | 20.0% |
| !! | TAGGTTTCAGAAATATTATT+TGG | + | chr7_4:56359938-56359957 | None:intergenic | 20.0% |
| !! | GTGATACTCAAATTATATAT+AGG | - | chr7_4:56359991-56360010 | Msa1164660:intron | 20.0% |
| !! | AACAAATGATAAATCTGTAA+GGG | + | chr7_4:56360555-56360574 | None:intergenic | 20.0% |
| !! | TAACAAATGATAAATCTGTA+AGG | + | chr7_4:56360556-56360575 | None:intergenic | 20.0% |
| !! | AATAAACTTGTGAAACAAAA+AGG | + | chr7_4:56360631-56360650 | None:intergenic | 20.0% |
| !! | TTCAAAATTTAGATCATCTA+AGG | - | chr7_4:56360664-56360683 | Msa1164660:intron | 20.0% |
| !!! | GTTTTTTTTTTTAACTGACT+TGG | - | chr7_4:56360925-56360944 | Msa1164660:intron | 20.0% |
| !! | TTCATACAAATAACATTAGA+GGG | + | chr7_4:56361438-56361457 | None:intergenic | 20.0% |
| !! | TTTCATACAAATAACATTAG+AGG | + | chr7_4:56361439-56361458 | None:intergenic | 20.0% |
| !!! | ATATTTTTCCTGAAATGAAT+TGG | - | chr7_4:56361489-56361508 | Msa1164660:intron | 20.0% |
| !!! | TATTTTTCCTGAAATGAATT+GGG | - | chr7_4:56361490-56361509 | Msa1164660:intron | 20.0% |
| !!! | AATTTAGAACTTTTGTATCT+AGG | + | chr7_4:56361569-56361588 | None:intergenic | 20.0% |
| !!! | AAAGTTCTAAATTCTTTAAC+CGG | - | chr7_4:56361576-56361595 | Msa1164660:intron | 20.0% |
| !!! | ATGTATGTGTTATTTAAGTA+GGG | - | chr7_4:56361826-56361845 | Msa1164660:CDS | 20.0% |
| ! | GATTAAAGCGAATTAATTGT+AGG | + | chr7_4:56356955-56356974 | None:intergenic | 25.0% |
| ! | AAAATGAGAAATTCAAAGTG+TGG | + | chr7_4:56357091-56357110 | None:intergenic | 25.0% |
| !! | GAAAATAAGTTTGGATTTTC+GGG | - | chr7_4:56357284-56357303 | Msa1164660:intron | 25.0% |
| ! | ATATAAATCATGTCTACACA+TGG | + | chr7_4:56357912-56357931 | None:intergenic | 25.0% |
| ! | AGAATAGAGTAATACATGAT+TGG | - | chr7_4:56357985-56358004 | Msa1164660:intron | 25.0% |
| ! | CTTAAATAATACTAGACTGT+TGG | - | chr7_4:56358299-56358318 | Msa1164660:intron | 25.0% |
| ! | ACAAACGTATCATTAATATC+AGG | - | chr7_4:56358379-56358398 | Msa1164660:intron | 25.0% |
| ! | TCACTTAAATAAAATCAACC+CGG | - | chr7_4:56358424-56358443 | Msa1164660:intron | 25.0% |
| !! | CGAAGTTGTTGTATATTTTA+AGG | + | chr7_4:56358507-56358526 | None:intergenic | 25.0% |
| !! | GAAGCTCATTTTATGTTAAA+AGG | - | chr7_4:56358621-56358640 | Msa1164660:intron | 25.0% |
| !! | TAATTTAAAGTGACATCCTA+GGG | + | chr7_4:56358755-56358774 | None:intergenic | 25.0% |
| !! | ATAATTTAAAGTGACATCCT+AGG | + | chr7_4:56358756-56358775 | None:intergenic | 25.0% |
| !!! | TATGTGGATTTTTCAGAATT+GGG | - | chr7_4:56358996-56359015 | Msa1164660:intron | 25.0% |
| ! | TGGCATTTCTGATATTATTA+CGG | - | chr7_4:56359376-56359395 | Msa1164660:intron | 25.0% |
| ! | TTTCTGATATTATTACGGTA+TGG | - | chr7_4:56359381-56359400 | Msa1164660:intron | 25.0% |
| ! | AACTAAACAAAGCAACAAAA+GGG | + | chr7_4:56359441-56359460 | None:intergenic | 25.0% |
| ! | AAACTAAACAAAGCAACAAA+AGG | + | chr7_4:56359442-56359461 | None:intergenic | 25.0% |
| ! | TCTGATTGTATAGTAGTAAA+AGG | - | chr7_4:56359475-56359494 | Msa1164660:intron | 25.0% |
| ! | AACGAATAAAGACACAATTA+TGG | + | chr7_4:56359516-56359535 | None:intergenic | 25.0% |
| !!! | TTTATTCGTTTTGACATATC+CGG | - | chr7_4:56359526-56359545 | Msa1164660:intron | 25.0% |
| !!! | TTTTTTATCAGTTCTAGATG+CGG | - | chr7_4:56359644-56359663 | Msa1164660:intron | 25.0% |
| ! | TGATACGCTAATATAACATT+TGG | + | chr7_4:56360021-56360040 | None:intergenic | 25.0% |
| ! | TGTTATATTAGCGTATCATA+TGG | - | chr7_4:56360023-56360042 | Msa1164660:CDS | 25.0% |
| ! | AACTGATGAGCATATTATTA+TGG | - | chr7_4:56360323-56360342 | Msa1164660:intron | 25.0% |
| ! | TTCAATTATACATGTAACCA+TGG | + | chr7_4:56360350-56360369 | None:intergenic | 25.0% |
| !! | TAGCTTCTTTTTGTATTGAA+GGG | - | chr7_4:56360386-56360405 | Msa1164660:intron | 25.0% |
| ! | TCTATACCAATATCTAGTAA+GGG | + | chr7_4:56360454-56360473 | None:intergenic | 25.0% |
| !! | CTAAATTTTGAATCAACAGA+GGG | + | chr7_4:56360656-56360675 | None:intergenic | 25.0% |
| !! | TCTAAATTTTGAATCAACAG+AGG | + | chr7_4:56360657-56360676 | None:intergenic | 25.0% |
| ! | GATAACACTACTATATTAAC+TGG | + | chr7_4:56361100-56361119 | None:intergenic | 25.0% |
| !!! | TATAAACTTGAGTTTTGAAG+TGG | - | chr7_4:56361141-56361160 | Msa1164660:intron | 25.0% |
| ! | ATATTTCTTTGTTCACAGTA+GGG | + | chr7_4:56361194-56361213 | None:intergenic | 25.0% |
| ! | TATATTTCTTTGTTCACAGT+AGG | + | chr7_4:56361195-56361214 | None:intergenic | 25.0% |
| ! | CATTTACCTGTACATTATAA+AGG | + | chr7_4:56361310-56361329 | None:intergenic | 25.0% |
| ! | CAAATATTAAATTAGCAGTG+GGG | + | chr7_4:56361364-56361383 | None:intergenic | 25.0% |
| ! | CCAAATATTAAATTAGCAGT+GGG | + | chr7_4:56361365-56361384 | None:intergenic | 25.0% |
| ! | TCCAAATATTAAATTAGCAG+TGG | + | chr7_4:56361366-56361385 | None:intergenic | 25.0% |
| !!! | AAGTTCTAAATTCTTTAACC+GGG | - | chr7_4:56361577-56361596 | Msa1164660:intron | 25.0% |
| ! | CAATATTTCCGAACAAAAAA+TGG | + | chr7_4:56361690-56361709 | None:intergenic | 25.0% |
| !! | AAATGTTTTGTACAGAATAG+AGG | - | chr7_4:56361801-56361820 | Msa1164660:CDS | 25.0% |
| !!! | CATGTATGTGTTATTTAAGT+AGG | - | chr7_4:56361825-56361844 | Msa1164660:CDS | 25.0% |
| ! | GAACATTGTTAAACTCATTA+TGG | + | chr7_4:56361878-56361897 | None:intergenic | 25.0% |
| !!! | CTTTGAGTTAACTTTTTTCA+TGG | + | chr7_4:56362030-56362049 | None:intergenic | 25.0% |
| ! | TTGACAAAAACCACAATTAT+GGG | + | chr7_4:56362231-56362250 | None:intergenic | 25.0% |
| ! | TTTGACAAAAACCACAATTA+TGG | + | chr7_4:56362232-56362251 | None:intergenic | 25.0% |
| ! | TACAAGGAATTAAAGAAGTT+GGG | + | chr7_4:56362399-56362418 | None:intergenic | 25.0% |
| ! | ATACAAGGAATTAAAGAAGT+TGG | + | chr7_4:56362400-56362419 | None:intergenic | 25.0% |
| CATTTCGTTATCAAGAACAA+TGG | - | chr7_4:56356673-56356692 | Msa1164660:three_prime_UTR | 30.0% | |
| ! | AACAAAACCCTCATTTTCTT+TGG | - | chr7_4:56356722-56356741 | Msa1164660:three_prime_UTR | 30.0% |
| AATGGAACCAAAGAAAATGA+GGG | + | chr7_4:56356732-56356751 | None:intergenic | 30.0% | |
| GAAGCAAAGATTAAGGTTAT+TGG | - | chr7_4:56357545-56357564 | Msa1164660:intron | 30.0% | |
| AAAGATTAAGGTTATTGGTG+TGG | - | chr7_4:56357550-56357569 | Msa1164660:intron | 30.0% | |
| AAGATTAAGGTTATTGGTGT+GGG | - | chr7_4:56357551-56357570 | Msa1164660:intron | 30.0% | |
| GATTGTTAATACTGATGTTC+AGG | - | chr7_4:56357637-56357656 | Msa1164660:intron | 30.0% | |
| AAGTAAAGAGTCAATACAAG+AGG | - | chr7_4:56357772-56357791 | Msa1164660:intron | 30.0% | |
| TAGAGTAATACATGATTGGT+AGG | - | chr7_4:56357989-56358008 | Msa1164660:intron | 30.0% | |
| TAATACATGATTGGTAGGAA+AGG | - | chr7_4:56357994-56358013 | Msa1164660:CDS | 30.0% | |
| CAATGCATGATAGAGTATAA+AGG | + | chr7_4:56358158-56358177 | None:intergenic | 30.0% | |
| CACTTAAATAAAATCAACCC+GGG | - | chr7_4:56358425-56358444 | Msa1164660:intron | 30.0% | |
| TTCGACAAATAAATGAGTGA+AGG | + | chr7_4:56358655-56358674 | None:intergenic | 30.0% | |
| TTTCGAAATATCATTTCCCT+AGG | - | chr7_4:56358736-56358755 | Msa1164660:intron | 30.0% | |
| TGCAATTTCAAATACTGTGA+TGG | - | chr7_4:56358809-56358828 | Msa1164660:intron | 30.0% | |
| !! | ATTTTAAGTCAATGCCTATG+TGG | - | chr7_4:56358980-56358999 | Msa1164660:intron | 30.0% |
| ! | CAATTCTGAAAAATCCACAT+AGG | + | chr7_4:56358997-56359016 | None:intergenic | 30.0% |
| !! | CTATGTGGATTTTTCAGAAT+TGG | - | chr7_4:56358995-56359014 | Msa1164660:intron | 30.0% |
| AATTCCAAATTGTTAGTCGT+TGG | - | chr7_4:56359034-56359053 | Msa1164660:intron | 30.0% | |
| TATACCAACGACTAACAATT+TGG | + | chr7_4:56359041-56359060 | None:intergenic | 30.0% | |
| !!! | CAAAACTTATTTTTGTAGGC+TGG | - | chr7_4:56359080-56359099 | Msa1164660:intron | 30.0% |
| !!! | TTATTTTTGTAGGCTGGAAT+GGG | - | chr7_4:56359086-56359105 | Msa1164660:intron | 30.0% |
| ! | GTCATTTGGAATAACTATCA+GGG | + | chr7_4:56359273-56359292 | None:intergenic | 30.0% |
| ! | TGTCATTTGGAATAACTATC+AGG | + | chr7_4:56359274-56359293 | None:intergenic | 30.0% |
| AAAAACTCAACAACCAAATG+TGG | + | chr7_4:56359564-56359583 | None:intergenic | 30.0% | |
| GTTATTTAAATGCAGATACC+CGG | - | chr7_4:56359766-56359785 | Msa1164660:intron | 30.0% | |
| TTATTTAAATGCAGATACCC+GGG | - | chr7_4:56359767-56359786 | Msa1164660:intron | 30.0% | |
| ! | CTAGCTTCTTTTTGTATTGA+AGG | - | chr7_4:56360385-56360404 | Msa1164660:intron | 30.0% |
| CTCTATACCAATATCTAGTA+AGG | + | chr7_4:56360455-56360474 | None:intergenic | 30.0% | |
| TACTAGATATTGGTATAGAG+AGG | - | chr7_4:56360455-56360474 | Msa1164660:intron | 30.0% | |
| ACTAGATATTGGTATAGAGA+GGG | - | chr7_4:56360456-56360475 | Msa1164660:intron | 30.0% | |
| AAACTTGTGAAACAAAAAGG+AGG | + | chr7_4:56360628-56360647 | None:intergenic | 30.0% | |
| TTTAGATCATCTAAGGATCA+TGG | - | chr7_4:56360671-56360690 | Msa1164660:intron | 30.0% | |
| TTAGATCATCTAAGGATCAT+GGG | - | chr7_4:56360672-56360691 | Msa1164660:intron | 30.0% | |
| TATAGTAATGATAGAACACC+AGG | + | chr7_4:56360954-56360973 | None:intergenic | 30.0% | |
| ! | TACTATATTAACTGGACTAG+AGG | + | chr7_4:56361092-56361111 | None:intergenic | 30.0% |
| CAAGTTTATAAATAGCTCAC+AGG | + | chr7_4:56361131-56361150 | None:intergenic | 30.0% | |
| TCATACTCTTGTATCTAAGA+TGG | - | chr7_4:56361283-56361302 | Msa1164660:intron | 30.0% | |
| CCCACTGCTAATTTAATATT+TGG | - | chr7_4:56361362-56361381 | Msa1164660:intron | 30.0% | |
| !!! | ACTGAACACCATTTTTTGTT+CGG | - | chr7_4:56361679-56361698 | Msa1164660:CDS | 30.0% |
| TCTATTGTTACGGAATAGAA+GGG | - | chr7_4:56361753-56361772 | Msa1164660:CDS | 30.0% | |
| GTTAAACTCATTATGGAACA+TGG | + | chr7_4:56361871-56361890 | None:intergenic | 30.0% | |
| TACATGAAACCTACCATATA+TGG | + | chr7_4:56361954-56361973 | None:intergenic | 30.0% | |
| CTATATGAAACCAAATGACA+TGG | + | chr7_4:56362099-56362118 | None:intergenic | 30.0% | |
| ! | CATGTCATTTGGTTTCATAT+AGG | - | chr7_4:56362097-56362116 | Msa1164660:CDS | 30.0% |
| ! | CTTTCTTCTTTAAGAATTCC+GGG | + | chr7_4:56362339-56362358 | None:intergenic | 30.0% |
| ! | CCTTTCTTCTTTAAGAATTC+CGG | + | chr7_4:56362340-56362359 | None:intergenic | 30.0% |
| ACAAGGAATTAAAGAAGTTG+GGG | + | chr7_4:56362398-56362417 | None:intergenic | 30.0% | |
| TTTACCACTGCATCAATATT+AGG | - | chr7_4:56362423-56362442 | Msa1164660:intron | 30.0% | |
| TTACCACTGCATCAATATTA+GGG | - | chr7_4:56362424-56362443 | Msa1164660:intron | 30.0% | |
| ATTGCTATAAAGGGCAAAAA+CGG | + | chr7_4:56362481-56362500 | None:intergenic | 30.0% | |
| ! | TTGCCCTTTATAGCAATTTT+AGG | - | chr7_4:56362484-56362503 | Msa1164660:intron | 30.0% |
| GGACCTAAAATTGCTATAAA+GGG | + | chr7_4:56362490-56362509 | None:intergenic | 30.0% | |
| AGGACCTAAAATTGCTATAA+AGG | + | chr7_4:56362491-56362510 | None:intergenic | 30.0% | |
| TACAGAGAAAATACCAGTAA+TGG | - | chr7_4:56362596-56362615 | Msa1164660:five_prime_UTR | 30.0% | |
| !!! | ATGAGGGTTTTGTTACTTCA+CGG | + | chr7_4:56356716-56356735 | None:intergenic | 35.0% |
| GAATGGAACCAAAGAAAATG+AGG | + | chr7_4:56356733-56356752 | None:intergenic | 35.0% | |
| TGGATTGAAGACGATGTATT+GGG | + | chr7_4:56356814-56356833 | None:intergenic | 35.0% | |
| ! | ATGGATTGAAGACGATGTAT+TGG | + | chr7_4:56356815-56356834 | None:intergenic | 35.0% |
| AAAGTGTGGAAGATGCAATT+GGG | + | chr7_4:56357077-56357096 | None:intergenic | 35.0% | |
| GAGTTTCGATACTGTAAGAA+TGG | - | chr7_4:56357142-56357161 | Msa1164660:intron | 35.0% | |
| !!! | TCATAGCAAAGACCCTTTTT+TGG | - | chr7_4:56357385-56357404 | Msa1164660:intron | 35.0% |
| CAGGATGAAGATCCAAAAAA+GGG | + | chr7_4:56357400-56357419 | None:intergenic | 35.0% | |
| TCAGGATGAAGATCCAAAAA+AGG | + | chr7_4:56357401-56357420 | None:intergenic | 35.0% | |
| ATGATTGAGAGTTCGATGAA+TGG | - | chr7_4:56357602-56357621 | Msa1164660:intron | 35.0% | |
| TAAAGAGTCAATACAAGAGG+CGG | - | chr7_4:56357775-56357794 | Msa1164660:intron | 35.0% | |
| TTGGTAGGAAAGGTAATCTA+TGG | - | chr7_4:56358004-56358023 | Msa1164660:CDS | 35.0% | |
| CTTGAATACTACCATACCAA+AGG | + | chr7_4:56358114-56358133 | None:intergenic | 35.0% | |
| !!! | ACTGTTGGGTTTTTTGTTGA+GGG | - | chr7_4:56358314-56358333 | Msa1164660:intron | 35.0% |
| AAATGAGCTTCCAATTGAAG+TGG | + | chr7_4:56358612-56358631 | None:intergenic | 35.0% | |
| TTCAGAATTGGGAATAGACA+CGG | - | chr7_4:56359007-56359026 | Msa1164660:intron | 35.0% | |
| !!! | CTTATTTTTGTAGGCTGGAA+TGG | - | chr7_4:56359085-56359104 | Msa1164660:intron | 35.0% |
| TTTGTGATACCAGCAATAAC+CGG | + | chr7_4:56359137-56359156 | None:intergenic | 35.0% | |
| TCAATGGGTATACTAACTGT+TGG | - | chr7_4:56359158-56359177 | Msa1164660:intron | 35.0% | |
| GGTATCAACATTGTCTCTTA+AGG | + | chr7_4:56359252-56359271 | None:intergenic | 35.0% | |
| ATTGAATGCTTCAGTTACAG+GGG | + | chr7_4:56359324-56359343 | None:intergenic | 35.0% | |
| GATTGAATGCTTCAGTTACA+GGG | + | chr7_4:56359325-56359344 | None:intergenic | 35.0% | |
| AGATTGAATGCTTCAGTTAC+AGG | + | chr7_4:56359326-56359345 | None:intergenic | 35.0% | |
| ! | TGTAACTGAAGCATTCAATC+TGG | - | chr7_4:56359325-56359344 | Msa1164660:intron | 35.0% |
| TAAACAAAGCAACAAAAGGG+AGG | + | chr7_4:56359438-56359457 | None:intergenic | 35.0% | |
| !! | AGCCATTATAGCTCTAACAT+CGG | + | chr7_4:56359812-56359831 | None:intergenic | 35.0% |
| TAATGCAGGTTCTTCACTTA+TGG | - | chr7_4:56359831-56359850 | Msa1164660:intron | 35.0% | |
| AATGCAGGTTCTTCACTTAT+GGG | - | chr7_4:56359832-56359851 | Msa1164660:intron | 35.0% | |
| TATGCATGCAAACTGCTATT+GGG | - | chr7_4:56359873-56359892 | Msa1164660:intron | 35.0% | |
| TTTGGGTCAAATAGAAGATC+TGG | + | chr7_4:56359920-56359939 | None:intergenic | 35.0% | |
| GTATTATGTAAGCGAACTGT+AGG | + | chr7_4:56359957-56359976 | None:intergenic | 35.0% | |
| !!! | TACAGCCAAAGTTGTTTTAG+AGG | - | chr7_4:56360072-56360091 | Msa1164660:CDS | 35.0% |
| !! | GCTATCCTCTAAAACAACTT+TGG | + | chr7_4:56360080-56360099 | None:intergenic | 35.0% |
| !!! | AAGTTGTTTTAGAGGATAGC+TGG | - | chr7_4:56360080-56360099 | Msa1164660:CDS | 35.0% |
| CATGCACACTTCAAAATTCA+TGG | - | chr7_4:56360181-56360200 | Msa1164660:CDS | 35.0% | |
| GAGCATATTATTATGGTCCA+TGG | - | chr7_4:56360330-56360349 | Msa1164660:intron | 35.0% | |
| TTTGTATTGAAGGGAAAACG+AGG | - | chr7_4:56360395-56360414 | Msa1164660:intron | 35.0% | |
| TTGTATTGAAGGGAAAACGA+GGG | - | chr7_4:56360396-56360415 | Msa1164660:intron | 35.0% | |
| TATGTTCCATACAATTCCAG+TGG | + | chr7_4:56360482-56360501 | None:intergenic | 35.0% | |
| GGAATTGTATGGAACATAAC+TGG | - | chr7_4:56360484-56360503 | Msa1164660:intron | 35.0% | |
| ATTGTATGGAACATAACTGG+TGG | - | chr7_4:56360487-56360506 | Msa1164660:intron | 35.0% | |
| ATAAATCTGTAAGGGTCAGA+GGG | + | chr7_4:56360547-56360566 | None:intergenic | 35.0% | |
| TAATTCGCATGCTGTTGTAA+GGG | + | chr7_4:56360741-56360760 | None:intergenic | 35.0% | |
| TTACTTGGAAACAAACACAC+TGG | - | chr7_4:56361028-56361047 | Msa1164660:intron | 35.0% | |
| !!! | AACTTGAGTTTTGAAGTGGA+TGG | - | chr7_4:56361145-56361164 | Msa1164660:intron | 35.0% |
| ! | TGGTTGTTTAAAGCTTGCTT+TGG | - | chr7_4:56361165-56361184 | Msa1164660:intron | 35.0% |
| GATGGTCCTTTATAATGTAC+AGG | - | chr7_4:56361301-56361320 | Msa1164660:intron | 35.0% | |
| GTAATAGATCCATCACTTAG+TGG | - | chr7_4:56361389-56361408 | Msa1164660:intron | 35.0% | |
| AATGTTGCCCAATTCATTTC+AGG | + | chr7_4:56361500-56361519 | None:intergenic | 35.0% | |
| GCAGAAAATCTACTCTTTCT+TGG | + | chr7_4:56361539-56361558 | None:intergenic | 35.0% | |
| ! | TGTCAATGAAATCTAGCTTC+TGG | - | chr7_4:56361625-56361644 | Msa1164660:CDS | 35.0% |
| ATTTAAACAAACCTGACGAG+AGG | + | chr7_4:56361719-56361738 | None:intergenic | 35.0% | |
| CTTCTATTCCGTAACAATAG+AGG | + | chr7_4:56361754-56361773 | None:intergenic | 35.0% | |
| CTCTATTGTTACGGAATAGA+AGG | - | chr7_4:56361752-56361771 | Msa1164660:CDS | 35.0% | |
| !! | AACAATGTTCTCTAGAACGA+AGG | - | chr7_4:56361888-56361907 | Msa1164660:CDS | 35.0% |
| AATGTGTGACCATATATGGT+AGG | - | chr7_4:56361942-56361961 | Msa1164660:CDS | 35.0% | |
| ! | GAGCATAACATTGATTGCTA+CGG | - | chr7_4:56362121-56362140 | Msa1164660:CDS | 35.0% |
| ! | AGCATAACATTGATTGCTAC+GGG | - | chr7_4:56362122-56362141 | Msa1164660:CDS | 35.0% |
| TATGGGTATGACATCATAGA+GGG | + | chr7_4:56362214-56362233 | None:intergenic | 35.0% | |
| TTATGGGTATGACATCATAG+AGG | + | chr7_4:56362215-56362234 | None:intergenic | 35.0% | |
| TGATGTCATACCCATAATTG+TGG | - | chr7_4:56362218-56362237 | Msa1164660:CDS | 35.0% | |
| ! | GTGGTTTTTGTCAAAAATGC+AGG | - | chr7_4:56362237-56362256 | Msa1164660:CDS | 35.0% |
| CCGGAATTCTTAAAGAAGAA+AGG | - | chr7_4:56362337-56362356 | Msa1164660:intron | 35.0% | |
| !! | GGAAAAGAGTATTAAGCTCT+TGG | + | chr7_4:56362376-56362395 | None:intergenic | 35.0% |
| CAAGGAATTAAAGAAGTTGG+GGG | + | chr7_4:56362397-56362416 | None:intergenic | 35.0% | |
| TGCAGTGGTAAAGAAATACA+AGG | + | chr7_4:56362415-56362434 | None:intergenic | 35.0% | |
| TACCACTGCATCAATATTAG+GGG | - | chr7_4:56362425-56362444 | Msa1164660:intron | 35.0% | |
| TAGGGGTAGAGTTAAACATT+TGG | - | chr7_4:56362442-56362461 | Msa1164660:intron | 35.0% | |
| TTGCTATAAAGGGCAAAAAC+GGG | + | chr7_4:56362480-56362499 | None:intergenic | 35.0% | |
| ! | TGGAAAGTTCTTAGCTTTCA+TGG | + | chr7_4:56362520-56362539 | None:intergenic | 35.0% |
| ! | TTCCAAACTTGTGTGTTTTG+AGG | - | chr7_4:56362535-56362554 | Msa1164660:intron | 35.0% |
| AGAAAATACCAGTAATGGTC+AGG | - | chr7_4:56362601-56362620 | Msa1164660:five_prime_UTR | 35.0% | |
| GAAAATACCAGTAATGGTCA+GGG | - | chr7_4:56362602-56362621 | Msa1164660:five_prime_UTR | 35.0% | |
| ! | CTTCCTCGAGTATGAAATTT+TGG | - | chr7_4:56362698-56362717 | Msa1164660:five_prime_UTR | 35.0% |
| TGAAGGAAAACGGTGATTGA+TGG | + | chr7_4:56356758-56356777 | None:intergenic | 40.0% | |
| AGTGAGTGAGTGAAGGAAAA+CGG | + | chr7_4:56356768-56356787 | None:intergenic | 40.0% | |
| GAAGCGTAATGAGAATTGAG+AGG | + | chr7_4:56356855-56356874 | None:intergenic | 40.0% | |
| CAAAGTGTGGAAGATGCAAT+TGG | + | chr7_4:56357078-56357097 | None:intergenic | 40.0% | |
| CGAATTCCAGAAATTCAGCA+GGG | - | chr7_4:56357183-56357202 | Msa1164660:intron | 40.0% | |
| GAATTCCAGAAATTCAGCAG+GGG | - | chr7_4:56357184-56357203 | Msa1164660:intron | 40.0% | |
| GGTGTTAACAACAGAAAGTG+TGG | - | chr7_4:56357305-56357324 | Msa1164660:intron | 40.0% | |
| ! | TTGTTTCAAGTGAAGTCGAC+AGG | - | chr7_4:56357329-56357348 | Msa1164660:intron | 40.0% |
| ! | TGTTTCAAGTGAAGTCGACA+GGG | - | chr7_4:56357330-56357349 | Msa1164660:intron | 40.0% |
| TTACCAAATTCGCACAGTGT+TGG | - | chr7_4:56357353-56357372 | Msa1164660:intron | 40.0% | |
| ! | GGGTCTTTGCTATGATGATA+AGG | + | chr7_4:56357380-56357399 | None:intergenic | 40.0% |
| ATTTCGATGCTTAGAGGTGA+AGG | - | chr7_4:56357422-56357441 | Msa1164660:intron | 40.0% | |
| ATTAAGGTTATTGGTGTGGG+TGG | - | chr7_4:56357554-56357573 | Msa1164660:intron | 40.0% | |
| TCAATACAAGAGGCGGTTTA+TGG | - | chr7_4:56357782-56357801 | Msa1164660:intron | 40.0% | |
| CAACCACTTTCCTTCAAACA+TGG | - | chr7_4:56357834-56357853 | Msa1164660:intron | 40.0% | |
| TGTAGAACAGCCATGTTTGA+AGG | + | chr7_4:56357847-56357866 | None:intergenic | 40.0% | |
| ! | GTCTACACATGGTAATGTTC+AGG | + | chr7_4:56357901-56357920 | None:intergenic | 40.0% |
| GTAATCTATGGTGTAGTGTG+AGG | - | chr7_4:56358016-56358035 | Msa1164660:CDS | 40.0% | |
| TAGGCCTCAATATTCCACAA+AGG | - | chr7_4:56358044-56358063 | Msa1164660:CDS | 40.0% | |
| AGGCCTCAATATTCCACAAA+GGG | - | chr7_4:56358045-56358064 | Msa1164660:CDS | 40.0% | |
| CAACCCTTTGTGGAATATTG+AGG | + | chr7_4:56358051-56358070 | None:intergenic | 40.0% | |
| TCCACAAAGGGTTGTCTATT+TGG | - | chr7_4:56358057-56358076 | Msa1164660:CDS | 40.0% | |
| ! | TTTTCTGCATGCCTTTGGTA+TGG | - | chr7_4:56358100-56358119 | Msa1164660:intron | 40.0% |
| !!! | GACTGTTGGGTTTTTTGTTG+AGG | - | chr7_4:56358313-56358332 | Msa1164660:intron | 40.0% |
| !!! | CTGTTGGGTTTTTTGTTGAG+GGG | - | chr7_4:56358315-56358334 | Msa1164660:intron | 40.0% |
| !!! | TGTTGGGTTTTTTGTTGAGG+GGG | - | chr7_4:56358316-56358335 | Msa1164660:intron | 40.0% |
| TGTTGAGGGGGGTAATTAAT+AGG | - | chr7_4:56358328-56358347 | Msa1164660:intron | 40.0% | |
| GTTGAGGGGGGTAATTAATA+GGG | - | chr7_4:56358329-56358348 | Msa1164660:intron | 40.0% | |
| TTGAGGGGGGTAATTAATAG+GGG | - | chr7_4:56358330-56358349 | Msa1164660:intron | 40.0% | |
| TGCTGGTATCACAAAGTCAA+TGG | - | chr7_4:56359142-56359161 | Msa1164660:intron | 40.0% | |
| GCTGGTATCACAAAGTCAAT+GGG | - | chr7_4:56359143-56359162 | Msa1164660:intron | 40.0% | |
| GCAGTAAGCAACTTGTCATT+TGG | + | chr7_4:56359287-56359306 | None:intergenic | 40.0% | |
| TCAACAACCAAATGTGGATC+CGG | + | chr7_4:56359558-56359577 | None:intergenic | 40.0% | |
| !! | ACCTTAAGCTTTGAACCGTA+CGG | + | chr7_4:56359712-56359731 | None:intergenic | 40.0% |
| TGCCGATGTTAGAGCTATAA+TGG | - | chr7_4:56359807-56359826 | Msa1164660:intron | 40.0% | |
| AGAGCTATAATGGCTAATGC+AGG | - | chr7_4:56359817-56359836 | Msa1164660:intron | 40.0% | |
| ATGCAGGTTCTTCACTTATG+GGG | - | chr7_4:56359833-56359852 | Msa1164660:intron | 40.0% | |
| GTATGCATGCAAACTGCTAT+TGG | - | chr7_4:56359872-56359891 | Msa1164660:intron | 40.0% | |
| ATGCATGCAAACTGCTATTG+GGG | - | chr7_4:56359874-56359893 | Msa1164660:intron | 40.0% | |
| CAAATAGAAGATCTGGACTC+AGG | + | chr7_4:56359913-56359932 | None:intergenic | 40.0% | |
| ! | CATCAGTTCTGACTAAGCAA+GGG | + | chr7_4:56360311-56360330 | None:intergenic | 40.0% |
| ! | TCATCAGTTCTGACTAAGCA+AGG | + | chr7_4:56360312-56360331 | None:intergenic | 40.0% |
| CAATATCTAGTAAGGGTGAC+TGG | + | chr7_4:56360447-56360466 | None:intergenic | 40.0% | |
| CAGTCACCCTTACTAGATAT+TGG | - | chr7_4:56360445-56360464 | Msa1164660:intron | 40.0% | |
| ! | AAGTGATCTGACCTTGTTTG+AGG | - | chr7_4:56360510-56360529 | Msa1164660:intron | 40.0% |
| GTAGCTAACTACCTCAAACA+AGG | + | chr7_4:56360524-56360543 | None:intergenic | 40.0% | |
| TAAATCTGTAAGGGTCAGAG+GGG | + | chr7_4:56360546-56360565 | None:intergenic | 40.0% | |
| GATAAATCTGTAAGGGTCAG+AGG | + | chr7_4:56360548-56360567 | None:intergenic | 40.0% | |
| AATTCGCATGCTGTTGTAAG+GGG | + | chr7_4:56360740-56360759 | None:intergenic | 40.0% | |
| GTAATTCGCATGCTGTTGTA+AGG | + | chr7_4:56360742-56360761 | None:intergenic | 40.0% | |
| !! | AGGGGCATTTCGAGAATTAT+AGG | - | chr7_4:56360794-56360813 | Msa1164660:intron | 40.0% |
| !!! | TTTTAACTGACTTGGTCTCC+TGG | - | chr7_4:56360933-56360952 | Msa1164660:intron | 40.0% |
| CTGGCTGAAAACGATATTAC+AGG | + | chr7_4:56360979-56360998 | None:intergenic | 40.0% | |
| AAAGAAAATACATCCCTGCC+TGG | + | chr7_4:56361002-56361021 | None:intergenic | 40.0% | |
| GTCGTATATAACTTCTGCTG+CGG | + | chr7_4:56361333-56361352 | None:intergenic | 40.0% | |
| ! | AATGAAATCTAGCTTCTGGC+TGG | - | chr7_4:56361629-56361648 | Msa1164660:CDS | 40.0% |
| CGCAAACACCTCTATTGTTA+CGG | - | chr7_4:56361743-56361762 | Msa1164660:CDS | 40.0% | |
| ! | AAGGGAAGTGTGTGTAATTG+AGG | - | chr7_4:56361771-56361790 | Msa1164660:CDS | 40.0% |
| ! | AGGGAAGTGTGTGTAATTGA+GGG | - | chr7_4:56361772-56361791 | Msa1164660:CDS | 40.0% |
| AGGGAATGTGTGACCATATA+TGG | - | chr7_4:56361938-56361957 | Msa1164660:CDS | 40.0% | |
| CTGATGTGAACCATGTCATT+TGG | - | chr7_4:56362086-56362105 | Msa1164660:CDS | 40.0% | |
| ATGGGTATGACATCATAGAG+GGG | + | chr7_4:56362213-56362232 | None:intergenic | 40.0% | |
| CAAACTACCATCAGTGAAAG+TGG | + | chr7_4:56362308-56362327 | None:intergenic | 40.0% | |
| CACTTTCACTGATGGTAGTT+TGG | - | chr7_4:56362306-56362325 | Msa1164660:five_prime_UTR | 40.0% | |
| TACCCCTAATATTGATGCAG+TGG | + | chr7_4:56362430-56362449 | None:intergenic | 40.0% | |
| ! | CTTAGCTTTCATGGACAACA+AGG | + | chr7_4:56362511-56362530 | None:intergenic | 40.0% |
| AGCCTCAAAACACACAAGTT+TGG | + | chr7_4:56362540-56362559 | None:intergenic | 40.0% | |
| ACCTTCTTCAAGTAAGCTAC+TGG | - | chr7_4:56362644-56362663 | Msa1164660:five_prime_UTR | 40.0% | |
| ACCAGTAGCTTACTTGAAGA+AGG | + | chr7_4:56362648-56362667 | None:intergenic | 40.0% | |
| CCACCAAAATTTCATACTCG+AGG | + | chr7_4:56362704-56362723 | None:intergenic | 40.0% | |
| ! | CCTCGAGTATGAAATTTTGG+TGG | - | chr7_4:56362701-56362720 | Msa1164660:five_prime_UTR | 40.0% |
| !! | AACGGTGATTGATGGTGGAA+TGG | + | chr7_4:56356750-56356769 | None:intergenic | 45.0% |
| AGGAAAACGGTGATTGATGG+TGG | + | chr7_4:56356755-56356774 | None:intergenic | 45.0% | |
| TCGTCTTCAATCCATTCCTC+AGG | - | chr7_4:56356820-56356839 | Msa1164660:three_prime_UTR | 45.0% | |
| GGAAGAAAGAACCTGAGGAA+TGG | + | chr7_4:56356834-56356853 | None:intergenic | 45.0% | |
| TGAGAGGAAGAAAGAACCTG+AGG | + | chr7_4:56356839-56356858 | None:intergenic | 45.0% | |
| !! | GCTGAATTTCTGGAATTCGC+AGG | + | chr7_4:56357182-56357201 | None:intergenic | 45.0% |
| GCGAATTCCAGAAATTCAGC+AGG | - | chr7_4:56357182-56357201 | Msa1164660:intron | 45.0% | |
| !! | CCTCTAAGCATCGAAATCTC+AGG | + | chr7_4:56357419-56357438 | None:intergenic | 45.0% |
| CCTGAGATTTCGATGCTTAG+AGG | - | chr7_4:56357416-56357435 | Msa1164660:intron | 45.0% | |
| CTTAGAGGTGAAGGAAGTAG+TGG | - | chr7_4:56357431-56357450 | Msa1164660:intron | 45.0% | |
| TGAGAGTTCGATGAATGGTG+TGG | - | chr7_4:56357607-56357626 | Msa1164660:intron | 45.0% | |
| ! | CGATGAATGGTGTGGAGTTT+TGG | - | chr7_4:56357615-56357634 | Msa1164660:intron | 45.0% |
| ! | AACCGGTTCTCAGAATTGAC+AGG | + | chr7_4:56357677-56357696 | None:intergenic | 45.0% |
| CGTGTAAGCTCTTGACCAAT+TGG | + | chr7_4:56357701-56357720 | None:intergenic | 45.0% | |
| ATTGGTCAAGAGCTTACACG+AGG | - | chr7_4:56357701-56357720 | Msa1164660:intron | 45.0% | |
| GCAGCATTCATACCAATCTC+CGG | + | chr7_4:56357746-56357765 | None:intergenic | 45.0% | |
| CAGCCATGTTTGAAGGAAAG+TGG | + | chr7_4:56357840-56357859 | None:intergenic | 45.0% | |
| GGTGTAGTGTGAGGAGAAAT+AGG | - | chr7_4:56358025-56358044 | Msa1164660:CDS | 45.0% | |
| GCCAAATAGACAACCCTTTG+TGG | + | chr7_4:56358061-56358080 | None:intergenic | 45.0% | |
| AAGGCATGCAGAAAAGAGCA+CGG | + | chr7_4:56358095-56358114 | None:intergenic | 45.0% | |
| ! | TGCTCTTTTCTGCATGCCTT+TGG | - | chr7_4:56358095-56358114 | Msa1164660:intron | 45.0% |
| !!! | GTTGGGTTTTTTGTTGAGGG+GGG | - | chr7_4:56358317-56358336 | Msa1164660:intron | 45.0% |
| TGAGGGGGGTAATTAATAGG+GGG | - | chr7_4:56358331-56358350 | Msa1164660:intron | 45.0% | |
| TGCATACATAAGCATGTGCC+CGG | + | chr7_4:56358446-56358465 | None:intergenic | 45.0% | |
| ! | TTTTTGTAGGCTGGAATGGG+TGG | - | chr7_4:56359089-56359108 | Msa1164660:intron | 45.0% |
| ACAACCCCTTTCTCGTTTGA+AGG | - | chr7_4:56359188-56359207 | Msa1164660:intron | 45.0% | |
| GCTGATGATATTCTGCGACA+AGG | - | chr7_4:56359347-56359366 | Msa1164660:intron | 45.0% | |
| AACAACCAAATGTGGATCCG+GGG | + | chr7_4:56359556-56359575 | None:intergenic | 45.0% | |
| CAACAACCAAATGTGGATCC+GGG | + | chr7_4:56359557-56359576 | None:intergenic | 45.0% | |
| !! | CGTACGGGGAAAGTATTATC+GGG | + | chr7_4:56359696-56359715 | None:intergenic | 45.0% |
| !! | CCGTACGGGGAAAGTATTAT+CGG | + | chr7_4:56359697-56359716 | None:intergenic | 45.0% |
| CCGATAATACTTTCCCCGTA+CGG | - | chr7_4:56359694-56359713 | Msa1164660:intron | 45.0% | |
| !! | CTTAAGCTTTGAACCGTACG+GGG | + | chr7_4:56359710-56359729 | None:intergenic | 45.0% |
| !! | CCTTAAGCTTTGAACCGTAC+GGG | + | chr7_4:56359711-56359730 | None:intergenic | 45.0% |
| TTAAATGCAGATACCCGGGT+TGG | - | chr7_4:56359771-56359790 | Msa1164660:intron | 45.0% | |
| AAAGTCGACATTCACCAACC+CGG | + | chr7_4:56359788-56359807 | None:intergenic | 45.0% | |
| GGTTCTTCACTTATGGGGAT+AGG | - | chr7_4:56359838-56359857 | Msa1164660:intron | 45.0% | |
| GTGTGCATGTCTGTAACTGA+AGG | - | chr7_4:56360045-56360064 | Msa1164660:CDS | 45.0% | |
| ! | TGGAGAAGCACACATGTTGA+TGG | - | chr7_4:56360201-56360220 | Msa1164660:CDS | 45.0% |
| CATCTAAGGATCATGGGAAG+TGG | - | chr7_4:56360678-56360697 | Msa1164660:intron | 45.0% | |
| ATTCGCATGCTGTTGTAAGG+GGG | + | chr7_4:56360739-56360758 | None:intergenic | 45.0% | |
| ! | AATATCGTTTTCAGCCAGCC+AGG | - | chr7_4:56360981-56361000 | Msa1164660:intron | 45.0% |
| ! | TTAACTGGACTAGAGGACAG+AGG | + | chr7_4:56361085-56361104 | None:intergenic | 45.0% |
| AATTAGCAGTGGGGTCTACA+AGG | + | chr7_4:56361355-56361374 | None:intergenic | 45.0% | |
| AGATCCATCACTTAGTGGTC+AGG | - | chr7_4:56361394-56361413 | Msa1164660:intron | 45.0% | |
| CTTACCTGACCACTAAGTGA+TGG | + | chr7_4:56361401-56361420 | None:intergenic | 45.0% | |
| TGAATTGGGCAACATTACCC+TGG | - | chr7_4:56361504-56361523 | Msa1164660:intron | 45.0% | |
| TTTCTTGGCACACTACACCA+GGG | + | chr7_4:56361524-56361543 | None:intergenic | 45.0% | |
| CACAACAGAAAGAGATGACC+CGG | + | chr7_4:56361598-56361617 | None:intergenic | 45.0% | |
| AAACAAACCTGACGAGAGGT+GGG | + | chr7_4:56361715-56361734 | None:intergenic | 45.0% | |
| TAAACAAACCTGACGAGAGG+TGG | + | chr7_4:56361716-56361735 | None:intergenic | 45.0% | |
| GGGTTAAGACATACCTGTAC+GGG | + | chr7_4:56362179-56362198 | None:intergenic | 45.0% | |
| GGGGTTAAGACATACCTGTA+CGG | + | chr7_4:56362180-56362199 | None:intergenic | 45.0% | |
| TGGGTATGACATCATAGAGG+GGG | + | chr7_4:56362212-56362231 | None:intergenic | 45.0% | |
| ! | ATCTCCTTGTGTGAGTTGAC+TGG | + | chr7_4:56362263-56362282 | None:intergenic | 45.0% |
| AAGGAGATACCGTTGTCAGT+CGG | - | chr7_4:56362275-56362294 | Msa1164660:five_prime_UTR | 45.0% | |
| CGATCTTCCACTTTCACTGA+TGG | - | chr7_4:56362298-56362317 | Msa1164660:five_prime_UTR | 45.0% | |
| TGGTAGTTTGGTTGAGATCC+CGG | - | chr7_4:56362318-56362337 | Msa1164660:five_prime_UTR | 45.0% | |
| TAACAAGCCCTGACCATTAC+TGG | + | chr7_4:56362612-56362631 | None:intergenic | 45.0% | |
| !!! | AATTTTTTTCATATTAATTT+AGG | - | chr7_4:56357953-56357972 | Msa1164660:intron | 5.0% |
| TCGAGTGAGTGAGTGAGTGA+AGG | + | chr7_4:56356775-56356794 | None:intergenic | 50.0% | |
| GGAATTCGCAGGTGCAAAAC+AGG | + | chr7_4:56357171-56357190 | None:intergenic | 50.0% | |
| AAGCACCCCTGCTGAATTTC+TGG | + | chr7_4:56357192-56357211 | None:intergenic | 50.0% | |
| GGACCAACACTGTGCGAATT+TGG | + | chr7_4:56357359-56357378 | None:intergenic | 50.0% | |
| CGTCCGAGAAAGGATATGTC+CGG | - | chr7_4:56357470-56357489 | Msa1164660:intron | 50.0% | |
| CCACCGGACATATCCTTTCT+CGG | + | chr7_4:56357476-56357495 | None:intergenic | 50.0% | |
| AAGGTTATTGGTGTGGGTGG+TGG | - | chr7_4:56357557-56357576 | Msa1164660:intron | 50.0% | |
| ! | TTATTGGTGTGGGTGGTGGT+GGG | - | chr7_4:56357561-56357580 | Msa1164660:intron | 50.0% |
| ! | CGCCTGTCAATTCTGAGAAC+CGG | - | chr7_4:56357672-56357691 | Msa1164660:intron | 50.0% |
| TCTGAGAACCGGTTGCCAAT+TGG | - | chr7_4:56357683-56357702 | Msa1164660:intron | 50.0% | |
| GCTCTTGACCAATTGGCAAC+CGG | + | chr7_4:56357694-56357713 | None:intergenic | 50.0% | |
| CAAGAGCTTACACGAGGTCT+TGG | - | chr7_4:56357707-56357726 | Msa1164660:intron | 50.0% | |
| !! | TCTTGGTGCTGGTGGTAATC+CGG | - | chr7_4:56357724-56357743 | Msa1164660:intron | 50.0% |
| GGCGGTTTATGGAGCTGATA+TGG | - | chr7_4:56357793-56357812 | Msa1164660:intron | 50.0% | |
| GCATACATAAGCATGTGCCC+GGG | + | chr7_4:56358445-56358464 | None:intergenic | 50.0% | |
| CGTATGGGGACTGATGTACA+AGG | + | chr7_4:56358571-56358590 | None:intergenic | 50.0% | |
| ACATCAGTCCCCATACGACT+AGG | - | chr7_4:56358574-56358593 | Msa1164660:intron | 50.0% | |
| TGCCAGCAACCTAGTCGTAT+GGG | + | chr7_4:56358586-56358605 | None:intergenic | 50.0% | |
| ATGCCAGCAACCTAGTCGTA+TGG | + | chr7_4:56358587-56358606 | None:intergenic | 50.0% | |
| GCTGGCATCTCCACTTCAAT+TGG | - | chr7_4:56358599-56358618 | Msa1164660:intron | 50.0% | |
| CCGTCCTTCAAACGAGAAAG+GGG | + | chr7_4:56359195-56359214 | None:intergenic | 50.0% | |
| CCCCTTTCTCGTTTGAAGGA+CGG | - | chr7_4:56359192-56359211 | Msa1164660:intron | 50.0% | |
| GCCGTCCTTCAAACGAGAAA+GGG | + | chr7_4:56359196-56359215 | None:intergenic | 50.0% | |
| CTTTCTCGTTTGAAGGACGG+CGG | - | chr7_4:56359195-56359214 | Msa1164660:intron | 50.0% | |
| AGGGCAGTTCAAGCACAAGA+AGG | - | chr7_4:56359218-56359237 | Msa1164660:intron | 50.0% | |
| ! | ATTCTGCGACAAGGTGTTCG+TGG | - | chr7_4:56359356-56359375 | Msa1164660:intron | 50.0% |
| TTGACATATCCGGTAGTCCC+CGG | - | chr7_4:56359536-56359555 | Msa1164660:CDS | 50.0% | |
| CCCGTACGGTTCAAAGCTTA+AGG | - | chr7_4:56359708-56359727 | Msa1164660:intron | 50.0% | |
| AAGTCGACATTCACCAACCC+GGG | + | chr7_4:56359787-56359806 | None:intergenic | 50.0% | |
| ATGGGGATAGGAACTGCAAC+TGG | - | chr7_4:56359850-56359869 | Msa1164660:intron | 50.0% | |
| ATTGGTATAGAGAGGGCCAC+TGG | - | chr7_4:56360463-56360482 | Msa1164660:intron | 50.0% | |
| AGAGGGCCACTGGAATTGTA+TGG | - | chr7_4:56360473-56360492 | Msa1164660:intron | 50.0% | |
| AAGGATCATGGGAAGTGGTC+AGG | - | chr7_4:56360683-56360702 | Msa1164660:intron | 50.0% | |
| TTCGCATGCTGTTGTAAGGG+GGG | + | chr7_4:56360738-56360757 | None:intergenic | 50.0% | |
| AAAATACATCCCTGCCTGGC+TGG | + | chr7_4:56360998-56361017 | None:intergenic | 50.0% | |
| CTTTCTTGGCACACTACACC+AGG | + | chr7_4:56361525-56361544 | None:intergenic | 50.0% | |
| TACGGGATTCAAGCGTCAAG+AGG | - | chr7_4:56362139-56362158 | Msa1164660:CDS | 50.0% | |
| ATGACATCATAGAGGGGGGA+GGG | + | chr7_4:56362207-56362226 | None:intergenic | 50.0% | |
| TATGACATCATAGAGGGGGG+AGG | + | chr7_4:56362208-56362227 | None:intergenic | 50.0% | |
| GGGTATGACATCATAGAGGG+GGG | + | chr7_4:56362211-56362230 | None:intergenic | 50.0% | |
| !! | GCAGGGGTGCTTGCTGTTAA+TGG | - | chr7_4:56357200-56357219 | Msa1164660:intron | 55.0% |
| !! | GGGGTGCTTGCTGTTAATGG+AGG | - | chr7_4:56357203-56357222 | Msa1164660:intron | 55.0% |
| CAACTCTACGCGTCCGAGAA+AGG | - | chr7_4:56357460-56357479 | Msa1164660:intron | 55.0% | |
| CCGAGAAAGGATATGTCCGG+TGG | - | chr7_4:56357473-56357492 | Msa1164660:intron | 55.0% | |
| GGATATGTCCGGTGGAGATG+TGG | - | chr7_4:56357481-56357500 | Msa1164660:intron | 55.0% | |
| TGGAGATGTGGTCGAAGGGT+TGG | - | chr7_4:56357493-56357512 | Msa1164660:intron | 55.0% | |
| ! | GTTATTGGTGTGGGTGGTGG+TGG | - | chr7_4:56357560-56357579 | Msa1164660:intron | 55.0% |
| ! | CTTACACGAGGTCTTGGTGC+TGG | - | chr7_4:56357713-56357732 | Msa1164660:intron | 55.0% |
| GCTGGTGGTAATCCGGAGAT+TGG | - | chr7_4:56357731-56357750 | Msa1164660:intron | 55.0% | |
| TCCCCATACGACTAGGTTGC+TGG | - | chr7_4:56358581-56358600 | Msa1164660:intron | 55.0% | |
| GCCAGCAACCTAGTCGTATG+GGG | + | chr7_4:56358585-56358604 | None:intergenic | 55.0% | |
| TTGTAGGCTGGAATGGGTGG+AGG | - | chr7_4:56359092-56359111 | Msa1164660:intron | 55.0% | |
| CGCCGTCCTTCAAACGAGAA+AGG | + | chr7_4:56359197-56359216 | None:intergenic | 55.0% | |
| AATGTGGATCCGGGGACTAC+CGG | + | chr7_4:56359548-56359567 | None:intergenic | 55.0% | |
| GTAGTCCCCGGATCCACATT+TGG | - | chr7_4:56359548-56359567 | Msa1164660:CDS | 55.0% | |
| TCGCATGCTGTTGTAAGGGG+GGG | + | chr7_4:56360737-56360756 | None:intergenic | 55.0% | |
| TATTGCACCCACCTCTCGTC+AGG | - | chr7_4:56361705-56361724 | Msa1164660:CDS | 55.0% | |
| AAGTGAAGCGAGACCCGTAC+AGG | - | chr7_4:56362163-56362182 | Msa1164660:CDS | 55.0% | |
| TCATAGAGGGGGGAGGGTTA+GGG | + | chr7_4:56362201-56362220 | None:intergenic | 55.0% | |
| ATCATAGAGGGGGGAGGGTT+AGG | + | chr7_4:56362202-56362221 | None:intergenic | 55.0% | |
| CAGGCCAGTCAACTCACACA+AGG | - | chr7_4:56362256-56362275 | Msa1164660:exon | 55.0% | |
| ! | GGAAGATCGCCGACTGACAA+CGG | + | chr7_4:56362287-56362306 | None:intergenic | 55.0% |
| TCCGGTGGAGATGTGGTCGA+AGG | - | chr7_4:56357488-56357507 | Msa1164660:intron | 60.0% | |
| CCCTTCGACCACATCTCCAC+CGG | + | chr7_4:56357492-56357511 | None:intergenic | 60.0% | |
| CCGGTGGAGATGTGGTCGAA+GGG | - | chr7_4:56357489-56357508 | Msa1164660:intron | 60.0% | |
| !! | ACACGAGGTCTTGGTGCTGG+TGG | - | chr7_4:56357716-56357735 | Msa1164660:intron | 60.0% |
| GCTGGAATGGGTGGAGGAAC+TGG | - | chr7_4:56359098-56359117 | Msa1164660:intron | 60.0% | |
| ATGGGTGGAGGAACTGGCAC+TGG | - | chr7_4:56359104-56359123 | Msa1164660:intron | 60.0% | |
| !! | AACTGGCACTGGTGCAGCTC+CGG | - | chr7_4:56359115-56359134 | Msa1164660:intron | 60.0% |
| GGTGCAGCTCCGGTTATTGC+TGG | - | chr7_4:56359125-56359144 | Msa1164660:intron | 60.0% | |
| TCTCGTTTGAAGGACGGCGG+AGG | - | chr7_4:56359198-56359217 | Msa1164660:intron | 60.0% | |
| CTCGTTTGAAGGACGGCGGA+GGG | - | chr7_4:56359199-56359218 | Msa1164660:intron | 60.0% | |
| ! | TCGTTTTCAGCCAGCCAGGC+AGG | - | chr7_4:56360985-56361004 | Msa1164660:intron | 60.0% |
| ! | CGTTTTCAGCCAGCCAGGCA+GGG | - | chr7_4:56360986-56361005 | Msa1164660:intron | 60.0% |
| ATAGAGGGGGGAGGGTTAGG+GGG | + | chr7_4:56362199-56362218 | None:intergenic | 60.0% | |
| CATAGAGGGGGGAGGGTTAG+GGG | + | chr7_4:56362200-56362219 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 56356668 | 56362737 | 56356668 | ID=Msa1164660;Name=Msa1164660 |
| chr7_4 | mRNA | 56356668 | 56362737 | 56356668 | ID=Msa1164660-mRNA-1;Parent=Msa1164660;Name=Msa1164660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=252|1|1|1|0.85|0.75|8|353|495 |
| chr7_4 | exon | 56356668 | 56357146 | 56356668 | ID=Msa1164660-mRNA-1:exon:16823;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56357221 | 56357286 | 56357221 | ID=Msa1164660-mRNA-1:exon:16822;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56357990 | 56358082 | 56357990 | ID=Msa1164660-mRNA-1:exon:16821;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56358874 | 56358998 | 56358874 | ID=Msa1164660-mRNA-1:exon:16820;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56359534 | 56359624 | 56359534 | ID=Msa1164660-mRNA-1:exon:16819;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56360008 | 56360307 | 56360008 | ID=Msa1164660-mRNA-1:exon:16818;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56361579 | 56362343 | 56361579 | ID=Msa1164660-mRNA-1:exon:16817;Parent=Msa1164660-mRNA-1 |
| chr7_4 | exon | 56362564 | 56362737 | 56362564 | ID=Msa1164660-mRNA-1:exon:16816;Parent=Msa1164660-mRNA-1 |
| chr7_4 | five_prime_UTR | 56362564 | 56362737 | 56362564 | ID=Msa1164660-mRNA-1:five_prime_utr;Parent=Msa1164660-mRNA-1 |
| chr7_4 | five_prime_UTR | 56362266 | 56362343 | 56362266 | ID=Msa1164660-mRNA-1:five_prime_utr;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56361579 | 56362265 | 56361579 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56360008 | 56360307 | 56360008 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56359534 | 56359624 | 56359534 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56358874 | 56358998 | 56358874 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56357990 | 56358082 | 56357990 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56357221 | 56357286 | 56357221 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | CDS | 56357021 | 56357146 | 56357021 | ID=Msa1164660-mRNA-1:cds;Parent=Msa1164660-mRNA-1 |
| chr7_4 | three_prime_UTR | 56356668 | 56357020 | 56356668 | ID=Msa1164660-mRNA-1:three_prime_utr;Parent=Msa1164660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
