Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0737900 | Msa1183350 | 0.841796 | 3.823274e-58 | -8.615850e-47 |
| Msa0125050 | Msa1183350 | 0.802230 | 6.192351e-49 | -8.615850e-47 |
| Msa0219100 | Msa1183350 | 0.888138 | 7.703191e-73 | -8.615850e-47 |
| Msa0482180 | Msa1183350 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa1105500 | Msa1183350 | 0.811726 | 6.060180e-51 | -8.615850e-47 |
| Msa1183350 | Msa1288510 | 0.876536 | 1.291928e-68 | -8.615850e-47 |
| Msa1183350 | Msa1371240 | 0.801185 | 1.014616e-48 | -8.615850e-47 |
| Msa1183350 | Msa1391750 | 0.815744 | 7.901527e-52 | -8.615850e-47 |
| Msa0895760 | Msa1183350 | 0.838786 | 2.338495e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1183350 | MtrunA17_Chr4g0059611 | 87.500 | 32 | 4 | 0 | 46 | 77 | 297 | 328 | 1.64e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 183 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAGCTTTAGAAGCTAAAT+TGG | 0.147902 | 8_1:-18588157 | Msa1183350:three_prime_UTR |
| CCTTCTCTGTTCAGGGGACT+TGG | 0.194217 | 8_1:+18589960 | None:intergenic |
| ACTTGGAAGCAATGAGAATT+TGG | 0.220424 | 8_1:-18590844 | Msa1183350:CDS |
| CAGAAGCTATTGCTGCAAAA+TGG | 0.252169 | 8_1:-18589930 | Msa1183350:three_prime_UTR |
| AGAAAGTGCCTTTGCTCTTA+TGG | 0.256302 | 8_1:-18589641 | Msa1183350:three_prime_UTR |
| ACAAGAGGCAATAAGTTCTT+TGG | 0.264991 | 8_1:-18588578 | Msa1183350:three_prime_UTR |
| TTGGGTGCTCTGTTGCTAAT+TGG | 0.276305 | 8_1:+18589979 | None:intergenic |
| ATCCCTGTTGTACCATTATT+AGG | 0.292065 | 8_1:+18590821 | None:intergenic |
| GTTAGACATTGCCTAGCTTA+TGG | 0.306007 | 8_1:+18587528 | None:intergenic |
| AAATGGAGTTCGAAATTGTT+TGG | 0.308023 | 8_1:-18589371 | Msa1183350:three_prime_UTR |
| GAGGCTCTAACTTCTCTTCC+TGG | 0.309690 | 8_1:+18589109 | None:intergenic |
| GTGCCATTACTAGGATTTCT+TGG | 0.312678 | 8_1:-18589396 | Msa1183350:intron |
| GGCAATGATCACACGGTTAC+AGG | 0.319193 | 8_1:-18588303 | Msa1183350:three_prime_UTR |
| TATTGCCTCTTGTAAATGTT+GGG | 0.320896 | 8_1:+18588588 | None:intergenic |
| GCTCATGTTCGCACATTACT+TGG | 0.354373 | 8_1:-18590861 | Msa1183350:CDS |
| TGCTTACATGACATCACCTT+TGG | 0.354544 | 8_1:+18590666 | None:intergenic |
| GGATTTGCTTTGCTTGCATC+AGG | 0.359030 | 8_1:-18589350 | Msa1183350:three_prime_UTR |
| ACTAGGATTTCTTGGGGAAA+TGG | 0.362003 | 8_1:-18589388 | Msa1183350:intron |
| GGTCAAAGTTATACGATAAC+AGG | 0.364096 | 8_1:-18589329 | Msa1183350:three_prime_UTR |
| AAAATGAAGTTGACTAATCT+TGG | 0.365767 | 8_1:-18590354 | Msa1183350:three_prime_UTR |
| AAAAGAACGTGGGAGGTTAA+AGG | 0.368139 | 8_1:-18589013 | Msa1183350:intron |
| TTGTTGATCCAAGGTTTCAT+AGG | 0.374379 | 8_1:+18590056 | None:intergenic |
| TTTGAGTGGAATTCAATTGC+AGG | 0.377246 | 8_1:-18590126 | Msa1183350:three_prime_UTR |
| GTTCAGTAATGGCGAATCTA+AGG | 0.381249 | 8_1:-18590893 | Msa1183350:CDS |
| TGCCATTACTAGGATTTCTT+GGG | 0.383104 | 8_1:-18589395 | Msa1183350:intron |
| ATGAGAATTTGGCCTAATAA+TGG | 0.388821 | 8_1:-18590833 | Msa1183350:intron |
| ATCTACCACTGTGCCTCTAT+TGG | 0.389069 | 8_1:-18588651 | Msa1183350:three_prime_UTR |
| GAGGAGTATTCGTGCTTCAT+AGG | 0.389321 | 8_1:-18587716 | Msa1183350:three_prime_UTR |
| CTGATTGTCATCAACAACTT+TGG | 0.393912 | 8_1:-18587478 | None:intergenic |
| AAAAGCTCAGATATTCAAAC+TGG | 0.402189 | 8_1:+18591553 | None:intergenic |
| GAATTCGCCGGTGGTGGGAT+TGG | 0.402373 | 8_1:-18592235 | Msa1183350:five_prime_UTR |
| GCACGAATACTCCTCGGATT+AGG | 0.407455 | 8_1:+18587724 | None:intergenic |
| TTGTTTCCTTTCTTCAACAC+TGG | 0.416092 | 8_1:+18590014 | None:intergenic |
| TTTGAAGAGACAAGTTCGTT+TGG | 0.417744 | 8_1:-18588405 | Msa1183350:three_prime_UTR |
| GTAATAATAGTCCTTCATTC+AGG | 0.418166 | 8_1:-18588089 | Msa1183350:three_prime_UTR |
| CTTCTCTGTTCAGGGGACTT+GGG | 0.418289 | 8_1:+18589961 | None:intergenic |
| GGGGAGTGGGAGAGAGAGAG+AGG | 0.431331 | 8_1:-18592343 | Msa1183350:five_prime_UTR |
| TTATTGCCTCTTGTAAATGT+TGG | 0.431874 | 8_1:+18588587 | None:intergenic |
| CCGGCGGTGGGAGGGAGTAC+CGG | 0.434236 | 8_1:-18592262 | Msa1183350:five_prime_UTR |
| GTTTCTGTTATTTCTGTAAG+TGG | 0.435024 | 8_1:-18589602 | Msa1183350:three_prime_UTR |
| CAGATATTCAAACTGGAAGT+TGG | 0.439187 | 8_1:+18591560 | None:intergenic |
| TAGTCTTTATTCAATAAAGT+AGG | 0.441698 | 8_1:+18587580 | None:intergenic |
| AACGGGAACGGGAGAAAGAA+GGG | 0.441804 | 8_1:-18592418 | Msa1183350:five_prime_UTR |
| GTATGATGAGGAAGCATTAG+AGG | 0.442565 | 8_1:-18588217 | Msa1183350:three_prime_UTR |
| AAACGGGAACGGGAGAAAGA+AGG | 0.448712 | 8_1:-18592419 | Msa1183350:five_prime_UTR |
| TCTCAAAATTTATGTAATCC+TGG | 0.448885 | 8_1:-18590915 | Msa1183350:CDS |
| CACACCTCTGTTAGATCATC+CGG | 0.451013 | 8_1:+18589202 | None:intergenic |
| AGAAGCTATTGCTGCAAAAT+GGG | 0.452125 | 8_1:-18589929 | Msa1183350:three_prime_UTR |
| AGGACGGGAACGAGAGAAAG+AGG | 0.452815 | 8_1:-18592374 | Msa1183350:five_prime_UTR |
| AAAGAAAGAACGGGAGAGGA+CGG | 0.454380 | 8_1:-18592390 | Msa1183350:five_prime_UTR |
| GGAGAAGAAGTAGCCGGCGG+TGG | 0.457238 | 8_1:-18592275 | Msa1183350:five_prime_UTR |
| ACTGTCAAAGTCAGAGTGTA+AGG | 0.462684 | 8_1:+18587951 | None:intergenic |
| CGGCGTGTCTGTGTCGTGTC+TGG | 0.464799 | 8_1:+18587810 | None:intergenic |
| TTAAACTTGTAAGACCATCT+AGG | 0.465871 | 8_1:+18588524 | None:intergenic |
| TTCAAAGTGTACACAAAATA+CGG | 0.467354 | 8_1:+18589254 | None:intergenic |
| GGAGAAGAAGTCGCCGGCGG+TGG | 0.470645 | 8_1:-18592309 | Msa1183350:five_prime_UTR |
| ACCGCCGGCGACTTCTTCTC+CGG | 0.470880 | 8_1:+18592311 | None:intergenic |
| AAGAAAGAACGGGAGAGGAC+GGG | 0.471733 | 8_1:-18592389 | Msa1183350:five_prime_UTR |
| CAGTGGAAGCATTGCAGTAT+CGG | 0.473726 | 8_1:-18588263 | Msa1183350:three_prime_UTR |
| GAGAGAGAGGGATGGAGTAC+CGG | 0.474429 | 8_1:-18592330 | Msa1183350:five_prime_UTR |
| GGAGAAGAATTCGCCGGTGG+TGG | 0.475881 | 8_1:-18592241 | Msa1183350:five_prime_UTR |
| TCTGTTGCTAATTGGTGCCC+TGG | 0.476775 | 8_1:+18589987 | None:intergenic |
| TATATTCGAAGAATTGCAAA+TGG | 0.478969 | 8_1:+18589577 | None:intergenic |
| ATCACTCATGGCTTTGTACA+TGG | 0.479686 | 8_1:-18588375 | Msa1183350:three_prime_UTR |
| TCGGAGAATGATGGAAGAAC+AGG | 0.480951 | 8_1:-18588244 | Msa1183350:three_prime_UTR |
| ACGATAACAGGAACCTATGC+AGG | 0.482058 | 8_1:-18589317 | Msa1183350:three_prime_UTR |
| AGGGAGAGAGAAACGGGAAC+GGG | 0.484162 | 8_1:-18592429 | None:intergenic |
| TCATCCCCTTCTGCCAATAG+AGG | 0.488121 | 8_1:+18588638 | None:intergenic |
| GCAGATAAAACATATTTGCT+TGG | 0.490350 | 8_1:-18588027 | Msa1183350:three_prime_UTR |
| AAGAAAGGAAACAAATGGCC+AGG | 0.492152 | 8_1:-18590005 | Msa1183350:three_prime_UTR |
| AACAGAATTCATTACCTCGT+TGG | 0.492282 | 8_1:+18588460 | None:intergenic |
| AGTCTTTATTCAATAAAGTA+GGG | 0.498382 | 8_1:+18587581 | None:intergenic |
| CATGGCTTTGTACATGGAGT+TGG | 0.501272 | 8_1:-18588369 | Msa1183350:three_prime_UTR |
| TGCAGGGAAGTATGTTATGC+AGG | 0.502136 | 8_1:-18589300 | Msa1183350:three_prime_UTR |
| CTGCTTAAGTTGTTGATCCA+AGG | 0.502608 | 8_1:+18590047 | None:intergenic |
| ATGTAATCCTGGTTCAGTAA+TGG | 0.506968 | 8_1:-18590904 | Msa1183350:CDS |
| AAGGGAGAGAGAAACGGGAA+CGG | 0.508194 | 8_1:-18592430 | None:intergenic |
| GCTTCATTGAGCCTGAATGA+AGG | 0.509878 | 8_1:+18588078 | None:intergenic |
| AAGAAGTAGCCGGCGGTGGG+AGG | 0.510660 | 8_1:-18592271 | Msa1183350:five_prime_UTR |
| GTGGGATTGGATTGAAGATG+TGG | 0.511366 | 8_1:-18592222 | Msa1183350:five_prime_UTR |
| TCTCAAATTATTAACAGTGT+CGG | 0.512179 | 8_1:+18587790 | None:intergenic |
| TTGGTCAGTAAGAGCTGCAA+TGG | 0.512404 | 8_1:-18590083 | Msa1183350:three_prime_UTR |
| CCGCTACTCCCTTCCACCGC+CGG | 0.513227 | 8_1:+18592296 | None:intergenic |
| AGAAGATCAAAGGAGCTGTC+AGG | 0.513258 | 8_1:-18589549 | Msa1183350:three_prime_UTR |
| ATTCAATTGCAGGAGCATCT+AGG | 0.515971 | 8_1:-18590116 | Msa1183350:three_prime_UTR |
| AAGAAGTCGCCGGCGGTGGA+AGG | 0.523697 | 8_1:-18592305 | Msa1183350:five_prime_UTR |
| CAACAAACAACAGTCCTAGA+TGG | 0.525178 | 8_1:-18588538 | Msa1183350:three_prime_UTR |
| CTGAGAAAGCAGCAGTGCAG+TGG | 0.528186 | 8_1:-18588280 | Msa1183350:three_prime_UTR |
| AGAAGTAGCCGGCGGTGGGA+GGG | 0.529743 | 8_1:-18592270 | Msa1183350:five_prime_UTR |
| AGAAAGTTTGCAGAAGATGA+AGG | 0.531151 | 8_1:-18590715 | Msa1183350:three_prime_UTR |
| ATGGAATTCCTATGAAACCT+TGG | 0.531728 | 8_1:-18590064 | Msa1183350:three_prime_UTR |
| CTGTGCCTCTATTGGCAGAA+GGG | 0.534725 | 8_1:-18588643 | Msa1183350:three_prime_UTR |
| CATTACCTCGTTGGAGTCAG+AGG | 0.535482 | 8_1:+18588469 | None:intergenic |
| GACGAAAGAAAGAACGGGAG+AGG | 0.535570 | 8_1:-18592394 | Msa1183350:five_prime_UTR |
| TGTTGAAGAAAGGAAACAAA+TGG | 0.535795 | 8_1:-18590010 | Msa1183350:three_prime_UTR |
| TGTAAGTTGCACCATAAGCT+AGG | 0.541495 | 8_1:-18587539 | Msa1183350:three_prime_UTR |
| GGACGGGAACGAGAGAAAGA+GGG | 0.542707 | 8_1:-18592373 | Msa1183350:five_prime_UTR |
| ATTGCCTCTTGTAAATGTTG+GGG | 0.545790 | 8_1:+18588589 | None:intergenic |
| AATGAGGCGTGGAAGGAAGA+TGG | 0.548441 | 8_1:-18590166 | Msa1183350:three_prime_UTR |
| TTCTTGTGTACTATGAAGCA+CGG | 0.549072 | 8_1:-18587848 | Msa1183350:three_prime_UTR |
| TCTCTTCAAATTGTTTACAA+TGG | 0.549100 | 8_1:+18588418 | None:intergenic |
| ATTGCAGGAGCATCTAGGCC+AGG | 0.550141 | 8_1:-18590111 | Msa1183350:three_prime_UTR |
| AAGTGCCTTTGCTCTTATGG+TGG | 0.551298 | 8_1:-18589638 | Msa1183350:three_prime_UTR |
| AGATTCGCCATTACTGAACC+AGG | 0.551614 | 8_1:+18590897 | None:intergenic |
| TTTGAGAAAATCACATAAGT+CGG | 0.553435 | 8_1:-18587774 | Msa1183350:three_prime_UTR |
| ACGGGAACGGGAGAAAGAAG+GGG | 0.555167 | 8_1:-18592417 | Msa1183350:five_prime_UTR |
| AAATAACAGAAACATTTATG+AGG | 0.555460 | 8_1:+18589612 | None:intergenic |
| CTTGGATCAACAACTTAAGC+AGG | 0.556220 | 8_1:-18590046 | Msa1183350:three_prime_UTR |
| AGGTTTCACATACTCTAAGT+AGG | 0.556394 | 8_1:+18589501 | None:intergenic |
| GAGAAGAAGTAGCCGGCGGT+GGG | 0.556771 | 8_1:-18592274 | Msa1183350:five_prime_UTR |
| TATGGGAAATGAGGCGTGGA+AGG | 0.561411 | 8_1:-18590173 | Msa1183350:three_prime_UTR |
| AAATGAAAACTGAACATGAA+AGG | 0.561852 | 8_1:+18589150 | None:intergenic |
| GACGGGAACGAGAGAAAGAG+GGG | 0.564331 | 8_1:-18592372 | Msa1183350:five_prime_UTR |
| AGAAGTCGCCGGCGGTGGAA+GGG | 0.564843 | 8_1:-18592304 | Msa1183350:five_prime_UTR |
| CCGGTACTCCCTCCCACCGC+CGG | 0.565659 | 8_1:+18592262 | None:intergenic |
| TGAGAAAGCTATGGGAAATG+AGG | 0.567042 | 8_1:-18590182 | Msa1183350:three_prime_UTR |
| GCGTGGAAGGAAGATGGTGC+AGG | 0.567129 | 8_1:-18590160 | Msa1183350:three_prime_UTR |
| GTCGGTATAATTATATGTGT+CGG | 0.569093 | 8_1:-18587756 | Msa1183350:three_prime_UTR |
| ACAACTTAAGCAGGAGTGGT+TGG | 0.573065 | 8_1:-18590037 | Msa1183350:three_prime_UTR |
| GATTGCTTCTGAGAATCGAC+AGG | 0.573387 | 8_1:-18591671 | Msa1183350:intron |
| CAAAGCTGTGGTGGAGACGC+AGG | 0.573670 | 8_1:-18591516 | Msa1183350:intron |
| TCATAGGTTGTGTACAGTGG+TGG | 0.574010 | 8_1:-18587700 | Msa1183350:three_prime_UTR |
| ACCACCGGCGAATTCTTCTC+CGG | 0.574099 | 8_1:+18592243 | None:intergenic |
| TGCTGGAGTGAGAAAGCTAT+GGG | 0.576084 | 8_1:-18590190 | Msa1183350:three_prime_UTR |
| CCAAGTCCCCTGAACAGAGA+AGG | 0.577586 | 8_1:-18589960 | Msa1183350:three_prime_UTR |
| GGTTGGCCAGTGTTGAAGAA+AGG | 0.578756 | 8_1:-18590020 | Msa1183350:three_prime_UTR |
| TTTGGACCGAAAATCACTCA+TGG | 0.580658 | 8_1:-18588387 | Msa1183350:three_prime_UTR |
| GAGAAGAATTCGCCGGTGGT+GGG | 0.582133 | 8_1:-18592240 | Msa1183350:five_prime_UTR |
| GTGCTGGAGTGAGAAAGCTA+TGG | 0.583096 | 8_1:-18590191 | Msa1183350:three_prime_UTR |
| ACTGTGCCTCTATTGGCAGA+AGG | 0.584005 | 8_1:-18588644 | Msa1183350:three_prime_UTR |
| CAGAGAATGCAAGTGATGGA+TGG | 0.585016 | 8_1:-18590950 | Msa1183350:CDS |
| GGATGTTTAATAGAAGAAAG+TGG | 0.585798 | 8_1:-18588114 | Msa1183350:three_prime_UTR |
| TTAACCCCAACATTTACAAG+AGG | 0.586501 | 8_1:-18588593 | Msa1183350:three_prime_UTR |
| GCCATTACTAGGATTTCTTG+GGG | 0.591419 | 8_1:-18589394 | Msa1183350:intron |
| AGTAGCGGAGAAGAAGTAGC+CGG | 0.595658 | 8_1:-18592281 | Msa1183350:five_prime_UTR |
| GGCTCAGAGAATGCAAGTGA+TGG | 0.597683 | 8_1:-18590954 | Msa1183350:intron |
| ATTGCAGTATCGGAGAATGA+TGG | 0.600567 | 8_1:-18588253 | Msa1183350:three_prime_UTR |
| TTCACATACTCTAAGTAGGA+AGG | 0.602936 | 8_1:+18589505 | None:intergenic |
| ATCAACAACTTAAGCAGGAG+TGG | 0.603415 | 8_1:-18590041 | Msa1183350:three_prime_UTR |
| CATAACATACTTCCCTGCAT+AGG | 0.604754 | 8_1:+18589304 | None:intergenic |
| CTTGCGGAAATTCAAAGCTG+TGG | 0.609411 | 8_1:-18591528 | Msa1183350:CDS |
| CGGGAACGGGAGAAAGAAGG+GGG | 0.610650 | 8_1:-18592416 | Msa1183350:five_prime_UTR |
| TTGTTTGTTGAATCTGAGAG+TGG | 0.611353 | 8_1:+18588551 | None:intergenic |
| CTTCAATCCAATCCCACCAC+CGG | 0.613920 | 8_1:+18592228 | None:intergenic |
| TGTGCCTCTATTGGCAGAAG+GGG | 0.614205 | 8_1:-18588642 | Msa1183350:three_prime_UTR |
| TGACATGCTTCTCAAAAGAG+AGG | 0.614433 | 8_1:-18588187 | Msa1183350:three_prime_UTR |
| ATATAAATGAAGAAGATCAA+AGG | 0.618445 | 8_1:-18589559 | Msa1183350:three_prime_UTR |
| ATGAAGCACGGATACGAACA+CGG | 0.621255 | 8_1:-18587836 | Msa1183350:three_prime_UTR |
| AGGAGAGTTGCTGCTTTGAG+TGG | 0.630829 | 8_1:-18590140 | Msa1183350:three_prime_UTR |
| AGAAAGGAAACAAATGGCCA+GGG | 0.632334 | 8_1:-18590004 | Msa1183350:three_prime_UTR |
| CCGGCGGTGGAAGGGAGTAG+CGG | 0.632981 | 8_1:-18592296 | Msa1183350:five_prime_UTR |
| TTCAGGCTCAATGAAGCAAG+AGG | 0.636416 | 8_1:-18588072 | Msa1183350:three_prime_UTR |
| CGATAACAGGAACCTATGCA+GGG | 0.636873 | 8_1:-18589316 | Msa1183350:three_prime_UTR |
| TATGAAGCACGAATACTCCT+CGG | 0.637050 | 8_1:+18587718 | None:intergenic |
| TGTTGCTGCAAACAACGCAA+TGG | 0.638980 | 8_1:-18588324 | Msa1183350:three_prime_UTR |
| GAGAATGATGGAAGAACAGG+CGG | 0.639655 | 8_1:-18588241 | Msa1183350:three_prime_UTR |
| AAGTTGTTGATGACAATCAG+AGG | 0.642908 | 8_1:+18587481 | None:intergenic |
| AGGAAAGAGCTAAAAGAACG+TGG | 0.646692 | 8_1:-18589024 | Msa1183350:three_prime_UTR |
| GGAAGCCACCATAAGAGCAA+AGG | 0.652426 | 8_1:+18589633 | None:intergenic |
| ACGCAATGGCAATGATCACA+CGG | 0.655986 | 8_1:-18588310 | Msa1183350:three_prime_UTR |
| CCTTTGGATTCTGCATAGCG+AGG | 0.656002 | 8_1:+18590682 | None:intergenic |
| AAGCTATGGGAAATGAGGCG+TGG | 0.656388 | 8_1:-18590177 | Msa1183350:three_prime_UTR |
| GCTCAATGAAGCAAGAGGAG+AGG | 0.657394 | 8_1:-18588067 | Msa1183350:three_prime_UTR |
| AGAACAGGCGGAGTATGATG+AGG | 0.659983 | 8_1:-18588229 | Msa1183350:three_prime_UTR |
| GCGGAAATTCAAAGCTGTGG+TGG | 0.662898 | 8_1:-18591525 | Msa1183350:CDS |
| CCTCGCTATGCAGAATCCAA+AGG | 0.671150 | 8_1:-18590682 | Msa1183350:three_prime_UTR |
| AGCGGAGAAGAAGTAGCCGG+CGG | 0.672888 | 8_1:-18592278 | Msa1183350:five_prime_UTR |
| ACCGGAGAAGAAGTCGCCGG+CGG | 0.678350 | 8_1:-18592312 | Msa1183350:five_prime_UTR |
| AGTACCGGAGAAGAAGTCGC+CGG | 0.680845 | 8_1:-18592315 | Msa1183350:five_prime_UTR |
| GCTTCATAGGTTGTGTACAG+TGG | 0.684369 | 8_1:-18587703 | Msa1183350:three_prime_UTR |
| AGTACCGGAGAAGAATTCGC+CGG | 0.686001 | 8_1:-18592247 | Msa1183350:five_prime_UTR |
| AAGTGATGGATGGTATCCTC+CGG | 0.690440 | 8_1:-18590940 | Msa1183350:CDS |
| AAGAGCTAAAAGAACGTGGG+AGG | 0.693701 | 8_1:-18589020 | Msa1183350:three_prime_UTR |
| ACCGGAGAAGAATTCGCCGG+TGG | 0.693766 | 8_1:-18592244 | Msa1183350:five_prime_UTR |
| GGAAAGAGCTAAAAGAACGT+GGG | 0.700105 | 8_1:-18589023 | Msa1183350:three_prime_UTR |
| GGTGTCAGACACCTAATCCG+AGG | 0.702396 | 8_1:-18587735 | Msa1183350:three_prime_UTR |
| GATGATCTAACAGAGGTGTG+TGG | 0.712310 | 8_1:-18589199 | Msa1183350:three_prime_UTR |
| GAAGGGGATGATATAAACGA+CGG | 0.720618 | 8_1:-18588626 | Msa1183350:three_prime_UTR |
| TGTTTAATAGAAGAAAGTGG+TGG | 0.722197 | 8_1:-18588111 | Msa1183350:three_prime_UTR |
| TTCTGCCAATAGAGGCACAG+TGG | 0.725506 | 8_1:+18588646 | None:intergenic |
| TTTGCCGGATGATCTAACAG+AGG | 0.743477 | 8_1:-18589206 | Msa1183350:three_prime_UTR |
| ACGGGAACGAGAGAAAGAGG+GGG | 0.747070 | 8_1:-18592371 | Msa1183350:five_prime_UTR |
| ATTTGCCTCTGACTCCAACG+AGG | 0.753481 | 8_1:-18588474 | Msa1183350:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATCCAAAAAAAAAAAAA+CGG | + | chr8_1:18587863-18587882 | None:intergenic | 15.0% |
| !! | ATAGAAATTATGATAAATAG+AGG | - | chr8_1:18588803-18588822 | Msa1183350:intron | 15.0% |
| !! | TAGAAATTATGATAAATAGA+GGG | - | chr8_1:18588804-18588823 | Msa1183350:intron | 15.0% |
| !!! | AAAAAGTATTATTAGATTAG+AGG | + | chr8_1:18589149-18589168 | None:intergenic | 15.0% |
| !! | ATCTATTCTTAAATCTTAAA+AGG | - | chr8_1:18589265-18589284 | Msa1183350:three_prime_UTR | 15.0% |
| !! | ATATAGGAAAAATAAAATAG+AGG | - | chr8_1:18589445-18589464 | Msa1183350:intron | 15.0% |
| !! | TATAGGAAAAATAAAATAGA+GGG | - | chr8_1:18589446-18589465 | Msa1183350:intron | 15.0% |
| !! | AGATTTAAAAGTAAGAAAAA+TGG | + | chr8_1:18589601-18589620 | None:intergenic | 15.0% |
| !! | TAAAAGATTAAATGTTTATG+AGG | + | chr8_1:18591135-18591154 | None:intergenic | 15.0% |
| !!! | TGCATTTTGTGTTTTATTTT+TGG | - | chr8_1:18587799-18587818 | Msa1183350:three_prime_UTR | 20.0% |
| !! | GAATCCAAAAAAAAAAAAAC+GGG | + | chr8_1:18587862-18587881 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGGATTCTGA+TGG | - | chr8_1:18587865-18587884 | Msa1183350:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTTGGATTCTGAT+GGG | - | chr8_1:18587866-18587885 | Msa1183350:three_prime_UTR | 20.0% |
| !!! | AGGTTTTAATTTTTCAGTTT+TGG | - | chr8_1:18587931-18587950 | Msa1183350:three_prime_UTR | 20.0% |
| !! | TAATTAACTTCAAAAAGAGT+AGG | + | chr8_1:18588151-18588170 | None:intergenic | 20.0% |
| !! | CAATTAGTTAACACAATAAA+AGG | + | chr8_1:18588292-18588311 | None:intergenic | 20.0% |
| !! | TTTGTTCTTGTGTTTATTTA+TGG | - | chr8_1:18588511-18588530 | Msa1183350:three_prime_UTR | 20.0% |
| !!! | TTAAAGGTAGCATTAAATTT+TGG | - | chr8_1:18588670-18588689 | Msa1183350:three_prime_UTR | 20.0% |
| !! | AAATAACAGAAACATTTATG+AGG | + | chr8_1:18590286-18590305 | None:intergenic | 20.0% |
| !! | ATATAAATGAAGAAGATCAA+AGG | - | chr8_1:18590336-18590355 | Msa1183350:intron | 20.0% |
| !!! | TTTTTTTTTTTGCATACAAC+AGG | + | chr8_1:18590852-18590871 | None:intergenic | 20.0% |
| !! | TGTTGTATGCAAAAAAAAAA+AGG | - | chr8_1:18590851-18590870 | Msa1183350:CDS | 20.0% |
| !!! | AGATTCAAAGTTTTAAACTT+AGG | - | chr8_1:18591077-18591096 | Msa1183350:intron | 20.0% |
| !! | ATGAGGTTTGTATATTAATA+TGG | + | chr8_1:18591118-18591137 | None:intergenic | 20.0% |
| !!! | TTTTCTATATGTATATAGTG+AGG | - | chr8_1:18591210-18591229 | Msa1183350:intron | 20.0% |
| !! | TTTCTATATGTATATAGTGA+GGG | - | chr8_1:18591211-18591230 | Msa1183350:intron | 20.0% |
| !!! | GAGTTTTATAGAAACAAATA+TGG | - | chr8_1:18591760-18591779 | Msa1183350:intron | 20.0% |
| !! | AGTCTTTATTCAATAAAGTA+GGG | + | chr8_1:18592317-18592336 | None:intergenic | 20.0% |
| !! | TAGTCTTTATTCAATAAAGT+AGG | + | chr8_1:18592318-18592337 | None:intergenic | 20.0% |
| !!! | CTTTCCCGTTTTTTTTTTTT+TGG | - | chr8_1:18587855-18587874 | Msa1183350:three_prime_UTR | 25.0% |
| !!! | TTTTTTTTTGGATTCTGATG+GGG | - | chr8_1:18587867-18587886 | Msa1183350:three_prime_UTR | 25.0% |
| !! | AATCTGTTAGTTTGATCTTA+AGG | - | chr8_1:18587911-18587930 | Msa1183350:three_prime_UTR | 25.0% |
| !!! | TTTTGTTGTTTGGTAATTCT+GGG | - | chr8_1:18588013-18588032 | Msa1183350:three_prime_UTR | 25.0% |
| !! | AAGATGTTATTTATTCCCTA+AGG | - | chr8_1:18588079-18588098 | Msa1183350:three_prime_UTR | 25.0% |
| !!! | TTTCATTTCAGGAGTTTTTT+TGG | - | chr8_1:18588201-18588220 | Msa1183350:three_prime_UTR | 25.0% |
| !!! | TTCATTTCAGGAGTTTTTTT+GGG | - | chr8_1:18588202-18588221 | Msa1183350:three_prime_UTR | 25.0% |
| !! | AATTGAGATTGTGTTTGTTT+TGG | - | chr8_1:18588547-18588566 | Msa1183350:three_prime_UTR | 25.0% |
| ! | AAAAATCATCAGAAACATCA+GGG | + | chr8_1:18588623-18588642 | None:intergenic | 25.0% |
| !! | AAATCGCAATCTTCTTTTAA+AGG | - | chr8_1:18588654-18588673 | Msa1183350:three_prime_UTR | 25.0% |
| !!! | TAGCATTAAATTTTGGTATC+TGG | - | chr8_1:18588677-18588696 | Msa1183350:intron | 25.0% |
| ! | TGAAGACAAAAACAAATGTT+TGG | - | chr8_1:18588827-18588846 | Msa1183350:three_prime_UTR | 25.0% |
| !! | TCTATGATTGTAGATTTTTC+TGG | - | chr8_1:18588906-18588925 | Msa1183350:intron | 25.0% |
| !! | CTATGATTGTAGATTTTTCT+GGG | - | chr8_1:18588907-18588926 | Msa1183350:intron | 25.0% |
| !!! | TTACATAAATTTTGAGACAC+CGG | + | chr8_1:18588977-18588996 | None:intergenic | 25.0% |
| ! | TCTCAAAATTTATGTAATCC+TGG | - | chr8_1:18588980-18588999 | Msa1183350:intron | 25.0% |
| ! | TTATTAGATTAGAGGTAGAA+TGG | + | chr8_1:18589141-18589160 | None:intergenic | 25.0% |
| ! | TCTTAAATCTTAAAAGGATG+AGG | - | chr8_1:18589271-18589290 | Msa1183350:three_prime_UTR | 25.0% |
| ! | TATGAGTAAAAGATGAAAAC+AGG | + | chr8_1:18589316-18589335 | None:intergenic | 25.0% |
| ! | AAAATGAAGTTGACTAATCT+TGG | - | chr8_1:18589541-18589560 | Msa1183350:three_prime_UTR | 25.0% |
| ! | AAAAGTAAGAAAAATGGTGA+TGG | + | chr8_1:18589595-18589614 | None:intergenic | 25.0% |
| ! | ATGTTAACATATACACTTAC+GGG | + | chr8_1:18589997-18590016 | None:intergenic | 25.0% |
| ! | GATGTTAACATATACACTTA+CGG | + | chr8_1:18589998-18590017 | None:intergenic | 25.0% |
| ! | TTATGACATTACTACAATCA+CGG | + | chr8_1:18590153-18590172 | None:intergenic | 25.0% |
| !! | ATTTAGCAATTTTCTTTGAC+AGG | - | chr8_1:18590209-18590228 | Msa1183350:three_prime_UTR | 25.0% |
| ! | TATATTCGAAGAATTGCAAA+TGG | + | chr8_1:18590321-18590340 | None:intergenic | 25.0% |
| ! | TTACAATATACACAAGTAAC+AGG | + | chr8_1:18590417-18590436 | None:intergenic | 25.0% |
| ! | TTCAAAGTGTACACAAAATA+CGG | + | chr8_1:18590644-18590663 | None:intergenic | 25.0% |
| ! | AAATGAAAACTGAACATGAA+AGG | + | chr8_1:18590748-18590767 | None:intergenic | 25.0% |
| ! | TTTGGAAATAAAGACAACAT+TGG | + | chr8_1:18590955-18590974 | None:intergenic | 25.0% |
| !!! | CTGTTGACTTTAATAAGAAT+TGG | - | chr8_1:18591023-18591042 | Msa1183350:intron | 25.0% |
| !!! | TCAAAGTTTTAAACTTAGGT+AGG | - | chr8_1:18591081-18591100 | Msa1183350:intron | 25.0% |
| !!! | ATCTTTTAATTTTCTGAGTG+TGG | - | chr8_1:18591147-18591166 | Msa1183350:intron | 25.0% |
| !! | GCAAATTTTGTCTTTTCTAA+TGG | + | chr8_1:18591407-18591426 | None:intergenic | 25.0% |
| ! | TCTCTTCAAATTGTTTACAA+TGG | + | chr8_1:18591480-18591499 | None:intergenic | 25.0% |
| ! | TCTCAAATTATTAACAGTGT+CGG | + | chr8_1:18592108-18592127 | None:intergenic | 25.0% |
| ! | TTTGAGAAAATCACATAAGT+CGG | - | chr8_1:18592121-18592140 | Msa1183350:intron | 25.0% |
| TTCTTCTTCTTCTTCATCAA+AGG | - | chr8_1:18587716-18587735 | Msa1183350:three_prime_UTR | 30.0% | |
| ACAAACCCTTAATATGCAAT+CGG | + | chr8_1:18587834-18587853 | None:intergenic | 30.0% | |
| ! | CATCTATGTGTGCAAAATTT+TGG | - | chr8_1:18587983-18588002 | Msa1183350:three_prime_UTR | 30.0% |
| !!! | TGGTTTTTGCTTTTGTTGTT+TGG | - | chr8_1:18588003-18588022 | Msa1183350:three_prime_UTR | 30.0% |
| !!! | CTTTTGTTGTTTGGTAATTC+TGG | - | chr8_1:18588012-18588031 | Msa1183350:three_prime_UTR | 30.0% |
| !!! | ATTGGTTTGTTTGGTGATTT+TGG | - | chr8_1:18588039-18588058 | Msa1183350:three_prime_UTR | 30.0% |
| !!! | TTGGTTTGTTTGGTGATTTT+GGG | - | chr8_1:18588040-18588059 | Msa1183350:three_prime_UTR | 30.0% |
| !! | ATTTTGGGTGCAAAATTTTC+AGG | - | chr8_1:18588055-18588074 | Msa1183350:three_prime_UTR | 30.0% |
| !!! | TATCATCTTGGCATGTTTTT+TGG | - | chr8_1:18588103-18588122 | Msa1183350:three_prime_UTR | 30.0% |
| ! | CAATCACTTTGTTTCATTTC+AGG | - | chr8_1:18588190-18588209 | Msa1183350:three_prime_UTR | 30.0% |
| AAAAGCTCAGATATTCAAAC+TGG | + | chr8_1:18588345-18588364 | None:intergenic | 30.0% | |
| ! | ATATCTGAGCTTTTATCTTG+CGG | - | chr8_1:18588351-18588370 | Msa1183350:three_prime_UTR | 30.0% |
| !!! | GATTGTGTTTGTTTTGGTTT+AGG | - | chr8_1:18588553-18588572 | Msa1183350:three_prime_UTR | 30.0% |
| TGAAGTTATGAATCAGATGT+TGG | - | chr8_1:18588589-18588608 | Msa1183350:three_prime_UTR | 30.0% | |
| GAAAAATCATCAGAAACATC+AGG | + | chr8_1:18588624-18588643 | None:intergenic | 30.0% | |
| ! | TTTTTCTGGGTTTGTGTTTT+TGG | - | chr8_1:18588920-18588939 | Msa1183350:intron | 30.0% |
| ATGAGAATTTGGCCTAATAA+TGG | - | chr8_1:18589062-18589081 | Msa1183350:intron | 30.0% | |
| TAATGGCGAATCAATAATTC+TGG | + | chr8_1:18589101-18589120 | None:intergenic | 30.0% | |
| CAAACTTGGACATAGAATAA+TGG | + | chr8_1:18589118-18589137 | None:intergenic | 30.0% | |
| AAACTCAAACTCAAACTACT+TGG | + | chr8_1:18589404-18589423 | None:intergenic | 30.0% | |
| ! | TAGTTTGAGTTTGAGTTTGA+GGG | - | chr8_1:18589406-18589425 | Msa1183350:intron | 30.0% |
| ! | ATGATAGGAAAGGATTTGTT+AGG | + | chr8_1:18589514-18589533 | None:intergenic | 30.0% |
| !! | TAAGAAAAATGGTGATGGAA+AGG | + | chr8_1:18589590-18589609 | None:intergenic | 30.0% |
| ATAAAGAAGGAGATTGTATG+GGG | + | chr8_1:18589650-18589669 | None:intergenic | 30.0% | |
| CATAAAGAAGGAGATTGTAT+GGG | + | chr8_1:18589651-18589670 | None:intergenic | 30.0% | |
| TACTGTACAATCCATAAAGA+AGG | + | chr8_1:18589663-18589682 | None:intergenic | 30.0% | |
| ACAAAAATGAAGATTAGTGC+TGG | - | chr8_1:18589688-18589707 | Msa1183350:intron | 30.0% | |
| TGTTGAAGAAAGGAAACAAA+TGG | - | chr8_1:18589885-18589904 | Msa1183350:intron | 30.0% | |
| ATGTTAACATCTTGAGTGTT+TGG | - | chr8_1:18590007-18590026 | Msa1183350:three_prime_UTR | 30.0% | |
| !! | TCTGTCATTGACTTTAAAGA+AGG | - | chr8_1:18590079-18590098 | Msa1183350:three_prime_UTR | 30.0% |
| TGTCATAAGTGTGTAAATTG+TGG | - | chr8_1:18590165-18590184 | Msa1183350:three_prime_UTR | 30.0% | |
| !! | GTTTCTGTTATTTCTGTAAG+TGG | - | chr8_1:18590293-18590312 | Msa1183350:intron | 30.0% |
| ! | ATTTACAGTTGTTATTCGCA+AGG | - | chr8_1:18590442-18590461 | Msa1183350:intron | 30.0% |
| ! | TTTACAGTTGTTATTCGCAA+GGG | - | chr8_1:18590443-18590462 | Msa1183350:intron | 30.0% |
| AAATGGAGTTCGAAATTGTT+TGG | - | chr8_1:18590524-18590543 | Msa1183350:intron | 30.0% | |
| ! | TCTTTTGATGTTTCATTTGC+CGG | - | chr8_1:18590674-18590693 | Msa1183350:three_prime_UTR | 30.0% |
| !! | TTCACACATAATTTTGATCC+AGG | - | chr8_1:18590768-18590787 | Msa1183350:intron | 30.0% |
| !! | TCATCAGTTGTATTTTTCAG+AGG | + | chr8_1:18590808-18590827 | None:intergenic | 30.0% |
| ATAAAGACAACATTGGACAA+TGG | + | chr8_1:18590948-18590967 | None:intergenic | 30.0% | |
| AAGCAAAATCTCTCAACATT+TGG | + | chr8_1:18590973-18590992 | None:intergenic | 30.0% | |
| GCATCTTAATCTTCTAACTA+TGG | - | chr8_1:18591169-18591188 | Msa1183350:intron | 30.0% | |
| TATTGCCTCTTGTAAATGTT+GGG | + | chr8_1:18591310-18591329 | None:intergenic | 30.0% | |
| TTATTGCCTCTTGTAAATGT+TGG | + | chr8_1:18591311-18591330 | None:intergenic | 30.0% | |
| TTAAACTTGTAAGACCATCT+AGG | + | chr8_1:18591374-18591393 | None:intergenic | 30.0% | |
| !! | TAGAGCTTTAGAAGCTAAAT+TGG | - | chr8_1:18591738-18591757 | Msa1183350:intron | 30.0% |
| GGATGTTTAATAGAAGAAAG+TGG | - | chr8_1:18591781-18591800 | Msa1183350:intron | 30.0% | |
| TGTTTAATAGAAGAAAGTGG+TGG | - | chr8_1:18591784-18591803 | Msa1183350:intron | 30.0% | |
| GTAATAATAGTCCTTCATTC+AGG | - | chr8_1:18591806-18591825 | Msa1183350:intron | 30.0% | |
| GCAGATAAAACATATTTGCT+TGG | - | chr8_1:18591868-18591887 | Msa1183350:intron | 30.0% | |
| ! | AGATCACACTTTTCAGAAAA+TGG | - | chr8_1:18591913-18591932 | Msa1183350:intron | 30.0% |
| GTCGGTATAATTATATGTGT+CGG | - | chr8_1:18592139-18592158 | Msa1183350:intron | 30.0% | |
| TGTCATCCGATTGCATATTA+AGG | - | chr8_1:18587825-18587844 | Msa1183350:three_prime_UTR | 35.0% | |
| GTCATCCGATTGCATATTAA+GGG | - | chr8_1:18587826-18587845 | Msa1183350:three_prime_UTR | 35.0% | |
| ATTCCCTAAGGTTATCATCT+TGG | - | chr8_1:18588091-18588110 | Msa1183350:three_prime_UTR | 35.0% | |
| ATGCCAAGATGATAACCTTA+GGG | + | chr8_1:18588097-18588116 | None:intergenic | 35.0% | |
| CAGATATTCAAACTGGAAGT+TGG | + | chr8_1:18588338-18588357 | None:intergenic | 35.0% | |
| GGATTTCTTATCGGAATTCA+AGG | - | chr8_1:18588424-18588443 | Msa1183350:three_prime_UTR | 35.0% | |
| TGAGAATCGACGATTTGATA+AGG | - | chr8_1:18588466-18588485 | Msa1183350:three_prime_UTR | 35.0% | |
| AAAGAAGATTGCGATTTCAG+AGG | + | chr8_1:18588651-18588670 | None:intergenic | 35.0% | |
| TAGATCACAAACAGACACAT+TGG | + | chr8_1:18588874-18588893 | None:intergenic | 35.0% | |
| ATGTAATCCTGGTTCAGTAA+TGG | - | chr8_1:18588991-18589010 | Msa1183350:intron | 35.0% | |
| ACTTGGAAGCAATGAGAATT+TGG | - | chr8_1:18589051-18589070 | Msa1183350:intron | 35.0% | |
| ATCCCTGTTGTACCATTATT+AGG | + | chr8_1:18589077-18589096 | None:intergenic | 35.0% | |
| ! | TGCAAACTTTCTGGTGAAAT+AGG | + | chr8_1:18589172-18589191 | None:intergenic | 35.0% |
| TTCATCTTCTGCAAACTTTC+TGG | + | chr8_1:18589181-18589200 | None:intergenic | 35.0% | |
| AGAAAGTTTGCAGAAGATGA+AGG | - | chr8_1:18589180-18589199 | Msa1183350:three_prime_UTR | 35.0% | |
| ATCTTAAAAGGATGAGGACA+TGG | - | chr8_1:18589277-18589296 | Msa1183350:three_prime_UTR | 35.0% | |
| GAGTAAAAGATGAAAACAGG+AGG | + | chr8_1:18589313-18589332 | None:intergenic | 35.0% | |
| ! | GTAGTTTGAGTTTGAGTTTG+AGG | - | chr8_1:18589405-18589424 | Msa1183350:intron | 35.0% |
| ! | AGTTTGAGTTTGAGTTTGAG+GGG | - | chr8_1:18589407-18589426 | Msa1183350:intron | 35.0% |
| GGGTATCATGCATGATATAT+AGG | - | chr8_1:18589429-18589448 | Msa1183350:intron | 35.0% | |
| !! | TTCATTTTGACCTGCATGAT+AGG | + | chr8_1:18589529-18589548 | None:intergenic | 35.0% |
| CCATAAAGAAGGAGATTGTA+TGG | + | chr8_1:18589652-18589671 | None:intergenic | 35.0% | |
| CCATACAATCTCCTTCTTTA+TGG | - | chr8_1:18589649-18589668 | Msa1183350:three_prime_UTR | 35.0% | |
| TTTGAGTGGAATTCAATTGC+AGG | - | chr8_1:18589769-18589788 | Msa1183350:intron | 35.0% | |
| ATGGAATTCCTATGAAACCT+TGG | - | chr8_1:18589831-18589850 | Msa1183350:intron | 35.0% | |
| TTGTTGATCCAAGGTTTCAT+AGG | + | chr8_1:18589842-18589861 | None:intergenic | 35.0% | |
| TTGTTTCCTTTCTTCAACAC+TGG | + | chr8_1:18589884-18589903 | None:intergenic | 35.0% | |
| ! | AATTTTCCTTCTCTGTTCAG+GGG | + | chr8_1:18589944-18589963 | None:intergenic | 35.0% |
| ! | CAATTTTCCTTCTCTGTTCA+GGG | + | chr8_1:18589945-18589964 | None:intergenic | 35.0% |
| AGAAGCTATTGCTGCAAAAT+GGG | - | chr8_1:18589966-18589985 | Msa1183350:three_prime_UTR | 35.0% | |
| ! | TAGCAATTTTCTTTGACAGG+AGG | - | chr8_1:18590212-18590231 | Msa1183350:three_prime_UTR | 35.0% |
| TTCACATACTCTAAGTAGGA+AGG | + | chr8_1:18590393-18590412 | None:intergenic | 35.0% | |
| AGGTTTCACATACTCTAAGT+AGG | + | chr8_1:18590397-18590416 | None:intergenic | 35.0% | |
| ! | TTACAGTTGTTATTCGCAAG+GGG | - | chr8_1:18590444-18590463 | Msa1183350:intron | 35.0% |
| TGCCATTACTAGGATTTCTT+GGG | - | chr8_1:18590500-18590519 | Msa1183350:intron | 35.0% | |
| GGTCAAAGTTATACGATAAC+AGG | - | chr8_1:18590566-18590585 | Msa1183350:intron | 35.0% | |
| AAAATACAACTGATGACCTG+AGG | - | chr8_1:18590812-18590831 | Msa1183350:intron | 35.0% | |
| TTAACCCCAACATTTACAAG+AGG | - | chr8_1:18591302-18591321 | Msa1183350:intron | 35.0% | |
| ATTGCCTCTTGTAAATGTTG+GGG | + | chr8_1:18591309-18591328 | None:intergenic | 35.0% | |
| ACAAGAGGCAATAAGTTCTT+TGG | - | chr8_1:18591317-18591336 | Msa1183350:intron | 35.0% | |
| ! | TTGTTTGTTGAATCTGAGAG+TGG | + | chr8_1:18591347-18591366 | None:intergenic | 35.0% |
| AACAGAATTCATTACCTCGT+TGG | + | chr8_1:18591438-18591457 | None:intergenic | 35.0% | |
| TTTGAAGAGACAAGTTCGTT+TGG | - | chr8_1:18591490-18591509 | Msa1183350:intron | 35.0% | |
| ! | ACAAAGCCATGAGTGATTTT+CGG | + | chr8_1:18591517-18591536 | None:intergenic | 35.0% |
| TTCTTGTGTACTATGAAGCA+CGG | - | chr8_1:18592047-18592066 | Msa1183350:intron | 35.0% | |
| !! | AAGTTGTTGATGACAATCAG+AGG | + | chr8_1:18592417-18592436 | None:intergenic | 35.0% |
| ! | TGTTGTTTGGTAATTCTGGG+TGG | - | chr8_1:18588016-18588035 | Msa1183350:three_prime_UTR | 40.0% |
| ! | TTTGGTAATTCTGGGTGGAT+TGG | - | chr8_1:18588021-18588040 | Msa1183350:three_prime_UTR | 40.0% |
| CATGCCAAGATGATAACCTT+AGG | + | chr8_1:18588098-18588117 | None:intergenic | 40.0% | |
| !!! | CATAAATTTTGAGACACCGG+AGG | + | chr8_1:18588974-18588993 | None:intergenic | 40.0% |
| GTTCAGTAATGGCGAATCTA+AGG | - | chr8_1:18589002-18589021 | Msa1183350:intron | 40.0% | |
| TGGCCTAATAATGGTACAAC+AGG | - | chr8_1:18589071-18589090 | Msa1183350:intron | 40.0% | |
| GGCCTAATAATGGTACAACA+GGG | - | chr8_1:18589072-18589091 | Msa1183350:intron | 40.0% | |
| TAGAGGTAGAATGGCAAACT+TGG | + | chr8_1:18589132-18589151 | None:intergenic | 40.0% | |
| TGCTTACATGACATCACCTT+TGG | + | chr8_1:18589232-18589251 | None:intergenic | 40.0% | |
| ! | GTTTGAGTTTGAGTTTGAGG+GGG | - | chr8_1:18589408-18589427 | Msa1183350:intron | 40.0% |
| ! | TTTGAGTTTGAGTTTGAGGG+GGG | - | chr8_1:18589409-18589428 | Msa1183350:intron | 40.0% |
| GAAGAATGTATCAGCTGTGT+TGG | + | chr8_1:18589478-18589497 | None:intergenic | 40.0% | |
| CAAATCCTTTCCTATCATGC+AGG | - | chr8_1:18589516-18589535 | Msa1183350:three_prime_UTR | 40.0% | |
| TTTGACCTGCATGATAGGAA+AGG | + | chr8_1:18589524-18589543 | None:intergenic | 40.0% | |
| AGGAGATTGTATGGGGTAAA+AGG | + | chr8_1:18589643-18589662 | None:intergenic | 40.0% | |
| TGAGAAAGCTATGGGAAATG+AGG | - | chr8_1:18589713-18589732 | Msa1183350:intron | 40.0% | |
| !! | ATTCAATTGCAGGAGCATCT+AGG | - | chr8_1:18589779-18589798 | Msa1183350:intron | 40.0% |
| TCTTACTGACCAAAAAAGCC+TGG | + | chr8_1:18589805-18589824 | None:intergenic | 40.0% | |
| ! | CTGCTTAAGTTGTTGATCCA+AGG | + | chr8_1:18589851-18589870 | None:intergenic | 40.0% |
| CTTGGATCAACAACTTAAGC+AGG | - | chr8_1:18589849-18589868 | Msa1183350:intron | 40.0% | |
| ATCAACAACTTAAGCAGGAG+TGG | - | chr8_1:18589854-18589873 | Msa1183350:intron | 40.0% | |
| AAGAAAGGAAACAAATGGCC+AGG | - | chr8_1:18589890-18589909 | Msa1183350:intron | 40.0% | |
| AGAAAGGAAACAAATGGCCA+GGG | - | chr8_1:18589891-18589910 | Msa1183350:intron | 40.0% | |
| ! | GCAATTTTCCTTCTCTGTTC+AGG | + | chr8_1:18589946-18589965 | None:intergenic | 40.0% |
| CAGAAGCTATTGCTGCAAAA+TGG | - | chr8_1:18589965-18589984 | Msa1183350:three_prime_UTR | 40.0% | |
| !! | AGAAAGTGCCTTTGCTCTTA+TGG | - | chr8_1:18590254-18590273 | Msa1183350:intron | 40.0% |
| ! | GTGCCATTACTAGGATTTCT+TGG | - | chr8_1:18590499-18590518 | Msa1183350:intron | 40.0% |
| GCCATTACTAGGATTTCTTG+GGG | - | chr8_1:18590501-18590520 | Msa1183350:intron | 40.0% | |
| TCCCCAAGAAATCCTAGTAA+TGG | + | chr8_1:18590505-18590524 | None:intergenic | 40.0% | |
| ACTAGGATTTCTTGGGGAAA+TGG | - | chr8_1:18590507-18590526 | Msa1183350:intron | 40.0% | |
| CATAACATACTTCCCTGCAT+AGG | + | chr8_1:18590594-18590613 | None:intergenic | 40.0% | |
| AGGAAAGAGCTAAAAGAACG+TGG | - | chr8_1:18590871-18590890 | Msa1183350:CDS | 40.0% | |
| GGAAAGAGCTAAAAGAACGT+GGG | - | chr8_1:18590872-18590891 | Msa1183350:CDS | 40.0% | |
| AAAAGAACGTGGGAGGTTAA+AGG | - | chr8_1:18590882-18590901 | Msa1183350:CDS | 40.0% | |
| GAAGGGGATGATATAAACGA+CGG | - | chr8_1:18591269-18591288 | Msa1183350:intron | 40.0% | |
| CAACAAACAACAGTCCTAGA+TGG | - | chr8_1:18591357-18591376 | Msa1183350:intron | 40.0% | |
| TTTGGACCGAAAATCACTCA+TGG | - | chr8_1:18591508-18591527 | Msa1183350:intron | 40.0% | |
| !! | ATCACTCATGGCTTTGTACA+TGG | - | chr8_1:18591520-18591539 | Msa1183350:CDS | 40.0% |
| ! | ATTGCAGTATCGGAGAATGA+TGG | - | chr8_1:18591642-18591661 | Msa1183350:intron | 40.0% |
| !! | GTATGATGAGGAAGCATTAG+AGG | - | chr8_1:18591678-18591697 | Msa1183350:CDS | 40.0% |
| TGACATGCTTCTCAAAAGAG+AGG | - | chr8_1:18591708-18591727 | Msa1183350:intron | 40.0% | |
| ACTGTCAAAGTCAGAGTGTA+AGG | + | chr8_1:18591947-18591966 | None:intergenic | 40.0% | |
| TATGAAGCACGAATACTCCT+CGG | + | chr8_1:18592180-18592199 | None:intergenic | 40.0% | |
| TGTAAGTTGCACCATAAGCT+AGG | - | chr8_1:18592356-18592375 | Msa1183350:five_prime_UTR | 40.0% | |
| GTTAGACATTGCCTAGCTTA+TGG | + | chr8_1:18592370-18592389 | None:intergenic | 40.0% | |
| AAGGGGGACGAAAGAAAGAA+CGG | - | chr8_1:18587495-18587514 | Msa1183350:three_prime_UTR | 45.0% | |
| AAAGAAAGAACGGGAGAGGA+CGG | - | chr8_1:18587505-18587524 | Msa1183350:three_prime_UTR | 45.0% | |
| GTGGGATTGGATTGAAGATG+TGG | - | chr8_1:18587673-18587692 | Msa1183350:three_prime_UTR | 45.0% | |
| !! | TCTGGGTGGATTGGTTTGTT+TGG | - | chr8_1:18588030-18588049 | Msa1183350:three_prime_UTR | 45.0% |
| ! | GATTGCTTCTGAGAATCGAC+AGG | - | chr8_1:18588224-18588243 | Msa1183350:three_prime_UTR | 45.0% |
| CTTGCGGAAATTCAAAGCTG+TGG | - | chr8_1:18588367-18588386 | Msa1183350:three_prime_UTR | 45.0% | |
| CGTGGAGAGGGATTTCTTAT+CGG | - | chr8_1:18588415-18588434 | Msa1183350:three_prime_UTR | 45.0% | |
| GAAGATTGCGATTTCAGAGG+TGG | + | chr8_1:18588648-18588667 | None:intergenic | 45.0% | |
| ! | CAGAGAATGCAAGTGATGGA+TGG | - | chr8_1:18588945-18588964 | Msa1183350:intron | 45.0% |
| !! | AAGTGATGGATGGTATCCTC+CGG | - | chr8_1:18588955-18588974 | Msa1183350:intron | 45.0% |
| AGATTCGCCATTACTGAACC+AGG | + | chr8_1:18589001-18589020 | None:intergenic | 45.0% | |
| GCTCATGTTCGCACATTACT+TGG | - | chr8_1:18589034-18589053 | Msa1183350:intron | 45.0% | |
| TGCTGGAGTGAGAAAGCTAT+GGG | - | chr8_1:18589705-18589724 | Msa1183350:intron | 45.0% | |
| TTGGTCAGTAAGAGCTGCAA+TGG | - | chr8_1:18589812-18589831 | Msa1183350:intron | 45.0% | |
| ACAACTTAAGCAGGAGTGGT+TGG | - | chr8_1:18589858-18589877 | Msa1183350:intron | 45.0% | |
| TTGGGTGCTCTGTTGCTAAT+TGG | + | chr8_1:18589919-18589938 | None:intergenic | 45.0% | |
| AAGTGCCTTTGCTCTTATGG+TGG | - | chr8_1:18590257-18590276 | Msa1183350:intron | 45.0% | |
| AGAAGATCAAAGGAGCTGTC+AGG | - | chr8_1:18590346-18590365 | Msa1183350:three_prime_UTR | 45.0% | |
| ! | TTCTGACACGTGCCATTACT+AGG | - | chr8_1:18590490-18590509 | Msa1183350:intron | 45.0% |
| ! | GGATTTGCTTTGCTTGCATC+AGG | - | chr8_1:18590545-18590564 | Msa1183350:intron | 45.0% |
| ACGATAACAGGAACCTATGC+AGG | - | chr8_1:18590578-18590597 | Msa1183350:intron | 45.0% | |
| CGATAACAGGAACCTATGCA+GGG | - | chr8_1:18590579-18590598 | Msa1183350:intron | 45.0% | |
| ! | TGCAGGGAAGTATGTTATGC+AGG | - | chr8_1:18590595-18590614 | Msa1183350:intron | 45.0% |
| TTTGCCGGATGATCTAACAG+AGG | - | chr8_1:18590689-18590708 | Msa1183350:three_prime_UTR | 45.0% | |
| CACACCTCTGTTAGATCATC+CGG | + | chr8_1:18590696-18590715 | None:intergenic | 45.0% | |
| ! | GATGATCTAACAGAGGTGTG+TGG | - | chr8_1:18590696-18590715 | Msa1183350:three_prime_UTR | 45.0% |
| CAACTGATGACCTGAGGATA+AGG | - | chr8_1:18590818-18590837 | Msa1183350:intron | 45.0% | |
| AAGAGCTAAAAGAACGTGGG+AGG | - | chr8_1:18590875-18590894 | Msa1183350:CDS | 45.0% | |
| ATCTACCACTGTGCCTCTAT+TGG | - | chr8_1:18591244-18591263 | Msa1183350:intron | 45.0% | |
| !! | CATGGCTTTGTACATGGAGT+TGG | - | chr8_1:18591526-18591545 | Msa1183350:CDS | 45.0% |
| TGTTGCTGCAAACAACGCAA+TGG | - | chr8_1:18591571-18591590 | Msa1183350:intron | 45.0% | |
| ACGCAATGGCAATGATCACA+CGG | - | chr8_1:18591585-18591604 | Msa1183350:intron | 45.0% | |
| !! | CAGTGGAAGCATTGCAGTAT+CGG | - | chr8_1:18591632-18591651 | Msa1183350:intron | 45.0% |
| ! | TCGGAGAATGATGGAAGAAC+AGG | - | chr8_1:18591651-18591670 | Msa1183350:intron | 45.0% |
| ! | GAGAATGATGGAAGAACAGG+CGG | - | chr8_1:18591654-18591673 | Msa1183350:intron | 45.0% |
| GCTTCATTGAGCCTGAATGA+AGG | + | chr8_1:18591820-18591839 | None:intergenic | 45.0% | |
| TTCAGGCTCAATGAAGCAAG+AGG | - | chr8_1:18591823-18591842 | Msa1183350:intron | 45.0% | |
| ATGAAGCACGGATACGAACA+CGG | - | chr8_1:18592059-18592078 | Msa1183350:intron | 45.0% | |
| !! | GAGGAGTATTCGTGCTTCAT+AGG | - | chr8_1:18592179-18592198 | Msa1183350:intron | 45.0% |
| GCTTCATAGGTTGTGTACAG+TGG | - | chr8_1:18592192-18592211 | Msa1183350:CDS | 45.0% | |
| TCATAGGTTGTGTACAGTGG+TGG | - | chr8_1:18592195-18592214 | Msa1183350:exon | 45.0% | |
| !!! | TTTTTAATATAAATTTTACA+TGG | - | chr8_1:18592220-18592239 | Msa1183350:five_prime_UTR | 5.0% |
| AGGGGGACGAAAGAAAGAAC+GGG | - | chr8_1:18587496-18587515 | Msa1183350:three_prime_UTR | 50.0% | |
| GACGAAAGAAAGAACGGGAG+AGG | - | chr8_1:18587501-18587520 | Msa1183350:three_prime_UTR | 50.0% | |
| AAGAAAGAACGGGAGAGGAC+GGG | - | chr8_1:18587506-18587525 | Msa1183350:three_prime_UTR | 50.0% | |
| ! | AGTAGCGGAGAAGAAGTAGC+CGG | - | chr8_1:18587614-18587633 | Msa1183350:three_prime_UTR | 50.0% |
| ! | AGTACCGGAGAAGAATTCGC+CGG | - | chr8_1:18587648-18587667 | Msa1183350:three_prime_UTR | 50.0% |
| CTTCAATCCAATCCCACCAC+CGG | + | chr8_1:18587670-18587689 | None:intergenic | 50.0% | |
| GCGGAAATTCAAAGCTGTGG+TGG | - | chr8_1:18588370-18588389 | Msa1183350:three_prime_UTR | 50.0% | |
| !!! | TGGTTTTGGCTAACGTGGAG+AGG | - | chr8_1:18588402-18588421 | Msa1183350:three_prime_UTR | 50.0% |
| !!! | GGTTTTGGCTAACGTGGAGA+GGG | - | chr8_1:18588403-18588422 | Msa1183350:three_prime_UTR | 50.0% |
| GGCTCAGAGAATGCAAGTGA+TGG | - | chr8_1:18588941-18588960 | Msa1183350:intron | 50.0% | |
| CCTTTGGATTCTGCATAGCG+AGG | + | chr8_1:18589216-18589235 | None:intergenic | 50.0% | |
| CCTCGCTATGCAGAATCCAA+AGG | - | chr8_1:18589213-18589232 | Msa1183350:three_prime_UTR | 50.0% | |
| GTGCTGGAGTGAGAAAGCTA+TGG | - | chr8_1:18589704-18589723 | Msa1183350:intron | 50.0% | |
| AAGCTATGGGAAATGAGGCG+TGG | - | chr8_1:18589718-18589737 | Msa1183350:intron | 50.0% | |
| TATGGGAAATGAGGCGTGGA+AGG | - | chr8_1:18589722-18589741 | Msa1183350:intron | 50.0% | |
| AATGAGGCGTGGAAGGAAGA+TGG | - | chr8_1:18589729-18589748 | Msa1183350:intron | 50.0% | |
| !! | AGGAGAGTTGCTGCTTTGAG+TGG | - | chr8_1:18589755-18589774 | Msa1183350:intron | 50.0% |
| !!! | GCATCTAGGCCAGGCTTTTT+TGG | - | chr8_1:18589793-18589812 | Msa1183350:intron | 50.0% |
| ! | GGTTGGCCAGTGTTGAAGAA+AGG | - | chr8_1:18589875-18589894 | Msa1183350:intron | 50.0% |
| ! | TCTGTTGCTAATTGGTGCCC+TGG | + | chr8_1:18589911-18589930 | None:intergenic | 50.0% |
| CTTCTCTGTTCAGGGGACTT+GGG | + | chr8_1:18589937-18589956 | None:intergenic | 50.0% | |
| GGAAGCCACCATAAGAGCAA+AGG | + | chr8_1:18590265-18590284 | None:intergenic | 50.0% | |
| ! | GAGGCTCTAACTTCTCTTCC+TGG | + | chr8_1:18590789-18590808 | None:intergenic | 50.0% |
| ! | GGTTCAAGAGCCTTATCCTC+AGG | + | chr8_1:18590831-18590850 | None:intergenic | 50.0% |
| ! | TTCTGCCAATAGAGGCACAG+TGG | + | chr8_1:18591252-18591271 | None:intergenic | 50.0% |
| ACTGTGCCTCTATTGGCAGA+AGG | - | chr8_1:18591251-18591270 | Msa1183350:intron | 50.0% | |
| CTGTGCCTCTATTGGCAGAA+GGG | - | chr8_1:18591252-18591271 | Msa1183350:intron | 50.0% | |
| TGTGCCTCTATTGGCAGAAG+GGG | - | chr8_1:18591253-18591272 | Msa1183350:intron | 50.0% | |
| TCATCCCCTTCTGCCAATAG+AGG | + | chr8_1:18591260-18591279 | None:intergenic | 50.0% | |
| ATTTGCCTCTGACTCCAACG+AGG | - | chr8_1:18591421-18591440 | Msa1183350:intron | 50.0% | |
| CATTACCTCGTTGGAGTCAG+AGG | + | chr8_1:18591429-18591448 | None:intergenic | 50.0% | |
| GGCAATGATCACACGGTTAC+AGG | - | chr8_1:18591592-18591611 | Msa1183350:intron | 50.0% | |
| AGAACAGGCGGAGTATGATG+AGG | - | chr8_1:18591666-18591685 | Msa1183350:intron | 50.0% | |
| GCTCAATGAAGCAAGAGGAG+AGG | - | chr8_1:18591828-18591847 | Msa1183350:intron | 50.0% | |
| GCACGAATACTCCTCGGATT+AGG | + | chr8_1:18592174-18592193 | None:intergenic | 50.0% | |
| AGGACGGGAACGAGAGAAAG+AGG | - | chr8_1:18587521-18587540 | Msa1183350:three_prime_UTR | 55.0% | |
| GGACGGGAACGAGAGAAAGA+GGG | - | chr8_1:18587522-18587541 | Msa1183350:three_prime_UTR | 55.0% | |
| GACGGGAACGAGAGAAAGAG+GGG | - | chr8_1:18587523-18587542 | Msa1183350:three_prime_UTR | 55.0% | |
| ACGGGAACGAGAGAAAGAGG+GGG | - | chr8_1:18587524-18587543 | Msa1183350:three_prime_UTR | 55.0% | |
| ACGAGAGAAAGAGGGGGTTG+AGG | - | chr8_1:18587530-18587549 | Msa1183350:three_prime_UTR | 55.0% | |
| CGAGAGAAAGAGGGGGTTGA+GGG | - | chr8_1:18587531-18587550 | Msa1183350:three_prime_UTR | 55.0% | |
| GAGAGAAAGAGGGGGTTGAG+GGG | - | chr8_1:18587532-18587551 | Msa1183350:three_prime_UTR | 55.0% | |
| AGAGAAAGAGGGGGTTGAGG+GGG | - | chr8_1:18587533-18587552 | Msa1183350:three_prime_UTR | 55.0% | |
| GAGAGAGAGGGATGGAGTAC+CGG | - | chr8_1:18587565-18587584 | Msa1183350:three_prime_UTR | 55.0% | |
| ! | AGTACCGGAGAAGAAGTCGC+CGG | - | chr8_1:18587580-18587599 | Msa1183350:three_prime_UTR | 55.0% |
| ACCACCGGCGAATTCTTCTC+CGG | + | chr8_1:18587655-18587674 | None:intergenic | 55.0% | |
| GAGAAGAATTCGCCGGTGGT+GGG | - | chr8_1:18587655-18587674 | Msa1183350:three_prime_UTR | 55.0% | |
| !!! | GCAGGTGGTTTTGGCTAACG+TGG | - | chr8_1:18588397-18588416 | Msa1183350:three_prime_UTR | 55.0% |
| !! | ATTGCAGGAGCATCTAGGCC+AGG | - | chr8_1:18589784-18589803 | Msa1183350:intron | 55.0% |
| CCTTCTCTGTTCAGGGGACT+TGG | + | chr8_1:18589938-18589957 | None:intergenic | 55.0% | |
| CCAAGTCCCCTGAACAGAGA+AGG | - | chr8_1:18589935-18589954 | Msa1183350:three_prime_UTR | 55.0% | |
| CTGAGAAAGCAGCAGTGCAG+TGG | - | chr8_1:18591615-18591634 | Msa1183350:intron | 55.0% | |
| GGTGTCAGACACCTAATCCG+AGG | - | chr8_1:18592160-18592179 | Msa1183350:intron | 55.0% | |
| CGGGAACGGGAGAAAGAAGG+GGG | - | chr8_1:18587479-18587498 | Msa1183350:three_prime_UTR | 60.0% | |
| GGGAGTGGGAGAGAGAGAGA+GGG | - | chr8_1:18587553-18587572 | Msa1183350:three_prime_UTR | 60.0% | |
| GTGGGAGAGAGAGAGAGGGA+TGG | - | chr8_1:18587557-18587576 | Msa1183350:three_prime_UTR | 60.0% | |
| AGCGGAGAAGAAGTAGCCGG+CGG | - | chr8_1:18587617-18587636 | Msa1183350:three_prime_UTR | 60.0% | |
| GAGAAGAAGTAGCCGGCGGT+GGG | - | chr8_1:18587621-18587640 | Msa1183350:three_prime_UTR | 60.0% | |
| ACCGGAGAAGAATTCGCCGG+TGG | - | chr8_1:18587651-18587670 | Msa1183350:three_prime_UTR | 60.0% | |
| GGAGAAGAATTCGCCGGTGG+TGG | - | chr8_1:18587654-18587673 | Msa1183350:three_prime_UTR | 60.0% | |
| !! | GAATTCGCCGGTGGTGGGAT+TGG | - | chr8_1:18587660-18587679 | Msa1183350:three_prime_UTR | 60.0% |
| ! | CAAAGCTGTGGTGGAGACGC+AGG | - | chr8_1:18588379-18588398 | Msa1183350:three_prime_UTR | 60.0% |
| ! | GGTGGAGACGCAGGTGGTTT+TGG | - | chr8_1:18588388-18588407 | Msa1183350:three_prime_UTR | 60.0% |
| GCGTGGAAGGAAGATGGTGC+AGG | - | chr8_1:18589735-18589754 | Msa1183350:intron | 60.0% | |
| AAGAGGGGGTTGAGGGGGAG+TGG | - | chr8_1:18587538-18587557 | Msa1183350:three_prime_UTR | 65.0% | |
| AGAGGGGGTTGAGGGGGAGT+GGG | - | chr8_1:18587539-18587558 | Msa1183350:three_prime_UTR | 65.0% | |
| GGGGAGTGGGAGAGAGAGAG+AGG | - | chr8_1:18587552-18587571 | Msa1183350:three_prime_UTR | 65.0% | |
| ACCGGAGAAGAAGTCGCCGG+CGG | - | chr8_1:18587583-18587602 | Msa1183350:three_prime_UTR | 65.0% | |
| ACCGCCGGCGACTTCTTCTC+CGG | + | chr8_1:18587587-18587606 | None:intergenic | 65.0% | |
| AAGAAGTCGCCGGCGGTGGA+AGG | - | chr8_1:18587590-18587609 | Msa1183350:three_prime_UTR | 65.0% | |
| AGAAGTCGCCGGCGGTGGAA+GGG | - | chr8_1:18587591-18587610 | Msa1183350:three_prime_UTR | 65.0% | |
| GGAGAAGAAGTAGCCGGCGG+TGG | - | chr8_1:18587620-18587639 | Msa1183350:three_prime_UTR | 65.0% | |
| AAGAAGTAGCCGGCGGTGGG+AGG | - | chr8_1:18587624-18587643 | Msa1183350:three_prime_UTR | 65.0% | |
| AGAAGTAGCCGGCGGTGGGA+GGG | - | chr8_1:18587625-18587644 | Msa1183350:three_prime_UTR | 65.0% | |
| ! | AGCTGTGGTGGAGACGCAGG+TGG | - | chr8_1:18588382-18588401 | Msa1183350:three_prime_UTR | 65.0% |
| CGGCGTGTCTGTGTCGTGTC+TGG | + | chr8_1:18592088-18592107 | None:intergenic | 65.0% | |
| GGAGAAGAAGTCGCCGGCGG+TGG | - | chr8_1:18587586-18587605 | Msa1183350:three_prime_UTR | 70.0% | |
| CCGCTACTCCCTTCCACCGC+CGG | + | chr8_1:18587602-18587621 | None:intergenic | 70.0% | |
| CCGGCGGTGGAAGGGAGTAG+CGG | - | chr8_1:18587599-18587618 | Msa1183350:three_prime_UTR | 70.0% | |
| CCGGTACTCCCTCCCACCGC+CGG | + | chr8_1:18587636-18587655 | None:intergenic | 75.0% | |
| ! | CCGGCGGTGGGAGGGAGTAC+CGG | - | chr8_1:18587633-18587652 | Msa1183350:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 18587479 | 18592438 | 18587479 | ID=Msa1183350;Name=Msa1183350 |
| chr8_1 | mRNA | 18587479 | 18592438 | 18587479 | ID=Msa1183350-mRNA-1;Parent=Msa1183350;Name=Msa1183350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=227|0.90|0.91|1|0.45|0.58|12|2159|88 |
| chr8_1 | exon | 18587479 | 18588689 | 18587479 | ID=Msa1183350-mRNA-1:exon:7165;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18588819 | 18588854 | 18588819 | ID=Msa1183350-mRNA-1:exon:7164;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18589014 | 18589044 | 18589014 | ID=Msa1183350-mRNA-1:exon:7163;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18589120 | 18589405 | 18589120 | ID=Msa1183350-mRNA-1:exon:7162;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18589514 | 18589686 | 18589514 | ID=Msa1183350-mRNA-1:exon:7161;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18589921 | 18590236 | 18589921 | ID=Msa1183350-mRNA-1:exon:7160;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18590342 | 18590379 | 18590342 | ID=Msa1183350-mRNA-1:exon:7159;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18590673 | 18590735 | 18590673 | ID=Msa1183350-mRNA-1:exon:7158;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18590834 | 18590969 | 18590834 | ID=Msa1183350-mRNA-1:exon:7157;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18591517 | 18591586 | 18591517 | ID=Msa1183350-mRNA-1:exon:7156;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18591672 | 18591705 | 18591672 | ID=Msa1183350-mRNA-1:exon:7155;Parent=Msa1183350-mRNA-1 |
| chr8_1 | exon | 18592180 | 18592438 | 18592180 | ID=Msa1183350-mRNA-1:exon:7154;Parent=Msa1183350-mRNA-1 |
| chr8_1 | five_prime_UTR | 18592212 | 18592438 | 18592212 | ID=Msa1183350-mRNA-1:five_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | CDS | 18592180 | 18592211 | 18592180 | ID=Msa1183350-mRNA-1:cds;Parent=Msa1183350-mRNA-1 |
| chr8_1 | CDS | 18591672 | 18591705 | 18591672 | ID=Msa1183350-mRNA-1:cds;Parent=Msa1183350-mRNA-1 |
| chr8_1 | CDS | 18591517 | 18591586 | 18591517 | ID=Msa1183350-mRNA-1:cds;Parent=Msa1183350-mRNA-1 |
| chr8_1 | CDS | 18590839 | 18590969 | 18590839 | ID=Msa1183350-mRNA-1:cds;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18590834 | 18590838 | 18590834 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18590673 | 18590735 | 18590673 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18590342 | 18590379 | 18590342 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18589921 | 18590236 | 18589921 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18589514 | 18589686 | 18589514 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18589120 | 18589405 | 18589120 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18589014 | 18589044 | 18589014 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18588819 | 18588854 | 18588819 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| chr8_1 | three_prime_UTR | 18587479 | 18588689 | 18587479 | ID=Msa1183350-mRNA-1:three_prime_utr;Parent=Msa1183350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
