Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125050 | sp|P48489|PP1_ORYSJ | 82.119 | 302 | 53 | 1 | 1 | 301 | 15 | 316 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125050 | O65846 | 100.000 | 310 | 0 | 0 | 1 | 310 | 1 | 310 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003300 | Msa0125050 | 0.800242 | 1.579670e-48 | -8.615850e-47 |
| Msa0029850 | Msa0125050 | 0.959804 | 7.569332e-118 | -8.615850e-47 |
| Msa0038020 | Msa0125050 | 0.816083 | 6.640598e-52 | -8.615850e-47 |
| Msa0042550 | Msa0125050 | 0.811505 | 6.769716e-51 | -8.615850e-47 |
| Msa0048000 | Msa0125050 | 0.811716 | 6.091568e-51 | -8.615850e-47 |
| Msa0050380 | Msa0125050 | 0.801446 | 8.972068e-49 | -8.615850e-47 |
| Msa0050930 | Msa0125050 | 0.801766 | 7.711100e-49 | -8.615850e-47 |
| Msa0076700 | Msa0125050 | 0.819661 | 1.033187e-52 | -8.615850e-47 |
| Msa0077180 | Msa0125050 | 0.952324 | 3.092582e-110 | -8.615850e-47 |
| Msa0077450 | Msa0125050 | 0.805327 | 1.408502e-49 | -8.615850e-47 |
| Msa0085720 | Msa0125050 | 0.846184 | 2.547484e-59 | -8.615850e-47 |
| Msa0102120 | Msa0125050 | 0.804586 | 2.011565e-49 | -8.615850e-47 |
| Msa0117770 | Msa0125050 | 0.812278 | 4.595217e-51 | -8.615850e-47 |
| Msa0124550 | Msa0125050 | 0.842112 | 3.155094e-58 | -8.615850e-47 |
| Msa0125050 | Msa0130970 | 0.800268 | 1.561135e-48 | -8.615850e-47 |
| Msa0125050 | Msa0137570 | 0.828968 | 6.692701e-55 | -8.615850e-47 |
| Msa0125050 | Msa0137870 | 0.809120 | 2.214138e-50 | -8.615850e-47 |
| Msa0125050 | Msa0140510 | -0.816297 | 5.947759e-52 | -8.615850e-47 |
| Msa0125050 | Msa0140860 | 0.805635 | 1.213978e-49 | -8.615850e-47 |
| Msa0125050 | Msa0144790 | 0.809250 | 2.076315e-50 | -8.615850e-47 |
| Msa0125050 | Msa0169820 | 0.950773 | 8.227305e-109 | -8.615850e-47 |
| Msa0125050 | Msa0170140 | 0.811244 | 7.714938e-51 | -8.615850e-47 |
| Msa0125050 | Msa0175050 | 0.828876 | 7.043689e-55 | -8.615850e-47 |
| Msa0125050 | Msa0178510 | 0.826868 | 2.141378e-54 | -8.615850e-47 |
| Msa0125050 | Msa0178860 | -0.825914 | 3.614922e-54 | -8.615850e-47 |
| Msa0125050 | Msa0182570 | 0.810674 | 1.024756e-50 | -8.615850e-47 |
| Msa0125050 | Msa0183010 | -0.860846 | 1.553303e-63 | -8.615850e-47 |
| Msa0125050 | Msa0187060 | 0.800411 | 1.459514e-48 | -8.615850e-47 |
| Msa0125050 | Msa0187220 | 0.827652 | 1.390006e-54 | -8.615850e-47 |
| Msa0125050 | Msa0189030 | 0.804275 | 2.335737e-49 | -8.615850e-47 |
| Msa0125050 | Msa0199800 | -0.844702 | 6.417034e-59 | -8.615850e-47 |
| Msa0125050 | Msa0202800 | 0.802033 | 6.797591e-49 | -8.615850e-47 |
| Msa0125050 | Msa0213040 | 0.847099 | 1.432523e-59 | -8.615850e-47 |
| Msa0125050 | Msa0219240 | 0.802052 | 6.735732e-49 | -8.615850e-47 |
| Msa0125050 | Msa0226180 | 0.820766 | 5.765384e-53 | -8.615850e-47 |
| Msa0125050 | Msa0230640 | -0.866562 | 2.604710e-65 | -8.615850e-47 |
| Msa0125050 | Msa0236420 | 0.805493 | 1.299897e-49 | -8.615850e-47 |
| Msa0125050 | Msa0243710 | 0.801575 | 8.440915e-49 | -8.615850e-47 |
| Msa0125050 | Msa0249560 | 0.811352 | 7.307588e-51 | -8.615850e-47 |
| Msa0125050 | Msa0253340 | 0.846065 | 2.744137e-59 | -8.615850e-47 |
| Msa0125050 | Msa0260810 | 0.806171 | 9.365388e-50 | -8.615850e-47 |
| Msa0125050 | Msa0266240 | 0.855637 | 5.518372e-62 | -8.615850e-47 |
| Msa0125050 | Msa0270960 | 0.804925 | 1.709370e-49 | -8.615850e-47 |
| Msa0125050 | Msa0271580 | 0.817821 | 2.703167e-52 | -8.615850e-47 |
| Msa0125050 | Msa0271650 | 0.814024 | 1.901328e-51 | -8.615850e-47 |
| Msa0125050 | Msa0277420 | 0.807693 | 4.461688e-50 | -8.615850e-47 |
| Msa0125050 | Msa0287700 | 0.817372 | 3.411999e-52 | -8.615850e-47 |
| Msa0125050 | Msa0292170 | 0.868985 | 4.343821e-66 | -8.615850e-47 |
| Msa0125050 | Msa0299580 | 0.800646 | 1.306943e-48 | -8.615850e-47 |
| Msa0125050 | Msa0304840 | 0.815919 | 7.223692e-52 | -8.615850e-47 |
| Msa0125050 | Msa0306210 | -0.801954 | 7.056291e-49 | -8.615850e-47 |
| Msa0125050 | Msa0309270 | 0.809208 | 2.119741e-50 | -8.615850e-47 |
| Msa0125050 | Msa0317270 | 0.800318 | 1.524707e-48 | -8.615850e-47 |
| Msa0125050 | Msa0322680 | 0.812013 | 5.248182e-51 | -8.615850e-47 |
| Msa0125050 | Msa0326520 | 0.807888 | 4.055277e-50 | -8.615850e-47 |
| Msa0125050 | Msa0330390 | 0.821410 | 4.097359e-53 | -8.615850e-47 |
| Msa0125050 | Msa0340170 | 0.809803 | 1.579664e-50 | -8.615850e-47 |
| Msa0125050 | Msa0341230 | 0.824186 | 9.251735e-54 | -8.615850e-47 |
| Msa0125050 | Msa0344690 | -0.838399 | 2.943297e-57 | -8.615850e-47 |
| Msa0125050 | Msa0350320 | -0.822401 | 2.415845e-53 | -8.615850e-47 |
| Msa0125050 | Msa0366210 | 0.823713 | 1.194541e-53 | -8.615850e-47 |
| Msa0125050 | Msa0376590 | 0.817081 | 3.968124e-52 | -8.615850e-47 |
| Msa0125050 | Msa0376910 | 0.824227 | 9.050512e-54 | -8.615850e-47 |
| Msa0125050 | Msa0377440 | 0.806964 | 6.369102e-50 | -8.615850e-47 |
| Msa0125050 | Msa0379640 | 0.802615 | 5.157643e-49 | -8.615850e-47 |
| Msa0125050 | Msa0381600 | -0.837762 | 4.293649e-57 | -8.615850e-47 |
| Msa0125050 | Msa0387280 | 0.803944 | 2.737385e-49 | -8.615850e-47 |
| Msa0125050 | Msa0387810 | 0.802978 | 4.340675e-49 | -8.615850e-47 |
| Msa0125050 | Msa0389610 | -0.803115 | 4.066036e-49 | -8.615850e-47 |
| Msa0125050 | Msa0389810 | 0.824393 | 8.270815e-54 | -8.615850e-47 |
| Msa0125050 | Msa0390960 | 0.827391 | 1.605389e-54 | -8.615850e-47 |
| Msa0125050 | Msa0392040 | -0.804673 | 1.929523e-49 | -8.615850e-47 |
| Msa0125050 | Msa0394260 | 0.811952 | 5.411412e-51 | -8.615850e-47 |
| Msa0125050 | Msa0394340 | 0.806174 | 9.348248e-50 | -8.615850e-47 |
| Msa0125050 | Msa0412840 | 0.812503 | 4.102784e-51 | -8.615850e-47 |
| Msa0125050 | Msa0426900 | 0.812448 | 4.218637e-51 | -8.615850e-47 |
| Msa0125050 | Msa0433410 | -0.846968 | 1.555787e-59 | -8.615850e-47 |
| Msa0125050 | Msa0436370 | 0.828186 | 1.034088e-54 | -8.615850e-47 |
| Msa0125050 | Msa0444750 | -0.831793 | 1.364693e-55 | -8.615850e-47 |
| Msa0125050 | Msa0458440 | 0.801112 | 1.049812e-48 | -8.615850e-47 |
| Msa0125050 | Msa0467930 | 0.812965 | 3.250181e-51 | -8.615850e-47 |
| Msa0125050 | Msa0468130 | 0.810165 | 1.320245e-50 | -8.615850e-47 |
| Msa0125050 | Msa0469940 | -0.841697 | 4.059597e-58 | -8.615850e-47 |
| Msa0125050 | Msa0471900 | 0.830102 | 3.547104e-55 | -8.615850e-47 |
| Msa0125050 | Msa0472960 | -0.822144 | 2.771379e-53 | -8.615850e-47 |
| Msa0125050 | Msa0477130 | -0.821231 | 4.506403e-53 | -8.615850e-47 |
| Msa0125050 | Msa0482180 | 0.818608 | 1.793914e-52 | -8.615850e-47 |
| Msa0125050 | Msa0482190 | -0.835486 | 1.631998e-56 | -8.615850e-47 |
| Msa0125050 | Msa0484780 | 0.807503 | 4.897249e-50 | -8.615850e-47 |
| Msa0125050 | Msa0485490 | 0.808154 | 3.559954e-50 | -8.615850e-47 |
| Msa0125050 | Msa0485500 | -0.834303 | 3.240195e-56 | -8.615850e-47 |
| Msa0125050 | Msa0486170 | -0.816614 | 5.050123e-52 | -8.615850e-47 |
| Msa0125050 | Msa0516370 | 0.805495 | 1.298491e-49 | -8.615850e-47 |
| Msa0125050 | Msa0517650 | 0.802385 | 5.753860e-49 | -8.615850e-47 |
| Msa0125050 | Msa0518380 | 0.812561 | 3.984861e-51 | -8.615850e-47 |
| Msa0125050 | Msa0526670 | -0.814070 | 1.857815e-51 | -8.615850e-47 |
| Msa0125050 | Msa0526940 | 0.806237 | 9.070739e-50 | -8.615850e-47 |
| Msa0125050 | Msa0530650 | 0.827497 | 1.514619e-54 | -8.615850e-47 |
| Msa0125050 | Msa0536220 | 0.818822 | 1.604182e-52 | -8.615850e-47 |
| Msa0125050 | Msa0567020 | 0.810930 | 9.021975e-51 | -8.615850e-47 |
| Msa0125050 | Msa0572420 | 0.828120 | 1.072350e-54 | -8.615850e-47 |
| Msa0125050 | Msa0572480 | 0.825790 | 3.867229e-54 | -8.615850e-47 |
| Msa0125050 | Msa0574850 | 0.836098 | 1.141904e-56 | -8.615850e-47 |
| Msa0125050 | Msa0580000 | 0.804814 | 1.802999e-49 | -8.615850e-47 |
| Msa0125050 | Msa0580180 | 0.809389 | 1.939009e-50 | -8.615850e-47 |
| Msa0125050 | Msa0587190 | 0.817351 | 3.449332e-52 | -8.615850e-47 |
| Msa0125050 | Msa0613460 | 0.820022 | 8.543536e-53 | -8.615850e-47 |
| Msa0125050 | Msa0615340 | 0.805616 | 1.225067e-49 | -8.615850e-47 |
| Msa0125050 | Msa0618360 | 0.804644 | 1.956974e-49 | -8.615850e-47 |
| Msa0125050 | Msa0621750 | -0.832418 | 9.562969e-56 | -8.615850e-47 |
| Msa0125050 | Msa0626990 | 0.821941 | 3.089476e-53 | -8.615850e-47 |
| Msa0125050 | Msa0627350 | 0.823625 | 1.252582e-53 | -8.615850e-47 |
| Msa0125050 | Msa0628740 | 0.809409 | 1.919932e-50 | -8.615850e-47 |
| Msa0125050 | Msa0631990 | 0.809130 | 2.202597e-50 | -8.615850e-47 |
| Msa0125050 | Msa0651190 | 0.801167 | 1.023199e-48 | -8.615850e-47 |
| Msa0125050 | Msa0658570 | 0.833496 | 5.158819e-56 | -8.615850e-47 |
| Msa0125050 | Msa0666140 | 0.803254 | 3.804840e-49 | -8.615850e-47 |
| Msa0125050 | Msa0667740 | 0.807735 | 4.370886e-50 | -8.615850e-47 |
| Msa0125050 | Msa0670660 | 0.809862 | 1.534018e-50 | -8.615850e-47 |
| Msa0125050 | Msa0672690 | 0.806468 | 8.107561e-50 | -8.615850e-47 |
| Msa0125050 | Msa0679550 | 0.808613 | 2.841947e-50 | -8.615850e-47 |
| Msa0125050 | Msa0688070 | 0.821765 | 3.392342e-53 | -8.615850e-47 |
| Msa0125050 | Msa0693380 | 0.813914 | 2.011205e-51 | -8.615850e-47 |
| Msa0125050 | Msa0698360 | 0.803909 | 2.783634e-49 | -8.615850e-47 |
| Msa0125050 | Msa0703780 | 0.825650 | 4.176350e-54 | -8.615850e-47 |
| Msa0125050 | Msa0705190 | 0.805626 | 1.218916e-49 | -8.615850e-47 |
| Msa0125050 | Msa0709160 | 0.817925 | 2.560481e-52 | -8.615850e-47 |
| Msa0125050 | Msa0715410 | 0.800309 | 1.530728e-48 | -8.615850e-47 |
| Msa0125050 | Msa0721280 | 0.804392 | 2.208247e-49 | -8.615850e-47 |
| Msa0125050 | Msa0722070 | 0.803158 | 3.983935e-49 | -8.615850e-47 |
| Msa0125050 | Msa0724560 | 0.837493 | 5.030910e-57 | -8.615850e-47 |
| Msa0125050 | Msa0731180 | 0.821265 | 4.426205e-53 | -8.615850e-47 |
| Msa0125050 | Msa0747260 | 0.804585 | 2.013176e-49 | -8.615850e-47 |
| Msa0125050 | Msa0751210 | 0.803628 | 3.184057e-49 | -8.615850e-47 |
| Msa0125050 | Msa0751850 | 0.810270 | 1.252921e-50 | -8.615850e-47 |
| Msa0125050 | Msa0763890 | 0.803518 | 3.355107e-49 | -8.615850e-47 |
| Msa0125050 | Msa0771580 | 0.806704 | 7.227173e-50 | -8.615850e-47 |
| Msa0125050 | Msa0773310 | 0.800351 | 1.501302e-48 | -8.615850e-47 |
| Msa0125050 | Msa0793240 | 0.817515 | 3.168203e-52 | -8.615850e-47 |
| Msa0125050 | Msa0801740 | 0.831255 | 1.851332e-55 | -8.615850e-47 |
| Msa0125050 | Msa0803590 | 0.828932 | 6.826799e-55 | -8.615850e-47 |
| Msa0125050 | Msa0805420 | 0.804782 | 1.831174e-49 | -8.615850e-47 |
| Msa0125050 | Msa0807030 | 0.824356 | 8.437790e-54 | -8.615850e-47 |
| Msa0125050 | Msa0817460 | 0.803180 | 3.943089e-49 | -8.615850e-47 |
| Msa0125050 | Msa0831150 | 0.802222 | 6.214565e-49 | -8.615850e-47 |
| Msa0125050 | Msa0831590 | 0.811148 | 8.092664e-51 | -8.615850e-47 |
| Msa0125050 | Msa0831850 | 0.823224 | 1.554375e-53 | -8.615850e-47 |
| Msa0125050 | Msa0832090 | 0.808583 | 2.884693e-50 | -8.615850e-47 |
| Msa0125050 | Msa0832970 | 0.814524 | 1.474912e-51 | -8.615850e-47 |
| Msa0125050 | Msa0842770 | 0.813037 | 3.134506e-51 | -8.615850e-47 |
| Msa0125050 | Msa0844320 | 0.803186 | 3.931156e-49 | -8.615850e-47 |
| Msa0125050 | Msa0847880 | 0.800593 | 1.339934e-48 | -8.615850e-47 |
| Msa0125050 | Msa0848900 | 0.835065 | 2.084179e-56 | -8.615850e-47 |
| Msa0125050 | Msa0864470 | -0.805975 | 1.029636e-49 | -8.615850e-47 |
| Msa0125050 | Msa0866410 | 0.804305 | 2.301981e-49 | -8.615850e-47 |
| Msa0125050 | Msa0876360 | 0.818344 | 2.058696e-52 | -8.615850e-47 |
| Msa0125050 | Msa0876850 | -0.800866 | 1.178913e-48 | -8.615850e-47 |
| Msa0125050 | Msa0892570 | 0.816524 | 5.291461e-52 | -8.615850e-47 |
| Msa0125050 | Msa0924310 | 0.806142 | 9.497828e-50 | -8.615850e-47 |
| Msa0125050 | Msa0942080 | -0.801361 | 9.338188e-49 | -8.615850e-47 |
| Msa0125050 | Msa0946280 | -0.819785 | 9.676069e-53 | -8.615850e-47 |
| Msa0125050 | Msa0957870 | 0.808126 | 3.609616e-50 | -8.615850e-47 |
| Msa0125050 | Msa0978700 | 0.804972 | 1.671301e-49 | -8.615850e-47 |
| Msa0125050 | Msa0981310 | 0.825319 | 5.000461e-54 | -8.615850e-47 |
| Msa0125050 | Msa0982240 | 0.828193 | 1.029761e-54 | -8.615850e-47 |
| Msa0125050 | Msa0982270 | 0.811919 | 5.502728e-51 | -8.615850e-47 |
| Msa0125050 | Msa1005410 | 0.819192 | 1.321289e-52 | -8.615850e-47 |
| Msa0125050 | Msa1006000 | 0.801490 | 8.783894e-49 | -8.615850e-47 |
| Msa0125050 | Msa1006850 | 0.846048 | 2.773597e-59 | -8.615850e-47 |
| Msa0125050 | Msa1008750 | 0.817157 | 3.814710e-52 | -8.615850e-47 |
| Msa0125050 | Msa1021510 | 0.841929 | 3.526129e-58 | -8.615850e-47 |
| Msa0125050 | Msa1029060 | -0.802024 | 6.824660e-49 | -8.615850e-47 |
| Msa0125050 | Msa1031770 | 0.819977 | 8.748414e-53 | -8.615850e-47 |
| Msa0125050 | Msa1040520 | 0.828965 | 6.705897e-55 | -8.615850e-47 |
| Msa0125050 | Msa1041600 | -0.813059 | 3.100801e-51 | -8.615850e-47 |
| Msa0125050 | Msa1063420 | 0.800713 | 1.266599e-48 | -8.615850e-47 |
| Msa0125050 | Msa1068200 | -0.828498 | 8.693838e-55 | -8.615850e-47 |
| Msa0125050 | Msa1070840 | 0.820336 | 7.239705e-53 | -8.615850e-47 |
| Msa0125050 | Msa1075080 | -0.844478 | 7.373723e-59 | -8.615850e-47 |
| Msa0125050 | Msa1075220 | -0.825838 | 3.767394e-54 | -8.615850e-47 |
| Msa0125050 | Msa1080160 | 0.800264 | 1.563902e-48 | -8.615850e-47 |
| Msa0125050 | Msa1080330 | -0.807169 | 5.762725e-50 | -8.615850e-47 |
| Msa0125050 | Msa1084260 | 0.809938 | 1.477628e-50 | -8.615850e-47 |
| Msa0125050 | Msa1090260 | 0.808847 | 2.532440e-50 | -8.615850e-47 |
| Msa0125050 | Msa1092090 | 0.803369 | 3.602538e-49 | -8.615850e-47 |
| Msa0125050 | Msa1098250 | 0.825720 | 4.018616e-54 | -8.615850e-47 |
| Msa0125050 | Msa1098270 | 0.835008 | 2.154691e-56 | -8.615850e-47 |
| Msa0125050 | Msa1100480 | 0.851994 | 6.175329e-61 | -8.615850e-47 |
| Msa0125050 | Msa1105190 | 0.813808 | 2.122016e-51 | -8.615850e-47 |
| Msa0125050 | Msa1105500 | 0.844476 | 7.385236e-59 | -8.615850e-47 |
| Msa0125050 | Msa1109820 | 0.805206 | 1.493072e-49 | -8.615850e-47 |
| Msa0125050 | Msa1116130 | -0.808200 | 3.481652e-50 | -8.615850e-47 |
| Msa0125050 | Msa1118760 | 0.828226 | 1.011216e-54 | -8.615850e-47 |
| Msa0125050 | Msa1124540 | -0.830613 | 2.661138e-55 | -8.615850e-47 |
| Msa0125050 | Msa1127770 | 0.830503 | 2.831379e-55 | -8.615850e-47 |
| Msa0125050 | Msa1130530 | 0.801535 | 8.603043e-49 | -8.615850e-47 |
| Msa0125050 | Msa1135880 | 0.820894 | 5.388237e-53 | -8.615850e-47 |
| Msa0125050 | Msa1139000 | -0.822430 | 2.378704e-53 | -8.615850e-47 |
| Msa0125050 | Msa1144720 | -0.824259 | 8.893254e-54 | -8.615850e-47 |
| Msa0125050 | Msa1156150 | -0.808087 | 3.678409e-50 | -8.615850e-47 |
| Msa0125050 | Msa1156340 | -0.824157 | 9.397813e-54 | -8.615850e-47 |
| Msa0125050 | Msa1158660 | 0.813899 | 2.026641e-51 | -8.615850e-47 |
| Msa0125050 | Msa1162550 | -0.837338 | 5.512272e-57 | -8.615850e-47 |
| Msa0125050 | Msa1163590 | -0.817448 | 3.280898e-52 | -8.615850e-47 |
| Msa0125050 | Msa1166500 | -0.811638 | 6.334507e-51 | -8.615850e-47 |
| Msa0125050 | Msa1170800 | 0.823387 | 1.423346e-53 | -8.615850e-47 |
| Msa0125050 | Msa1174310 | 0.838487 | 2.793131e-57 | -8.615850e-47 |
| Msa0125050 | Msa1177780 | 0.845677 | 3.497733e-59 | -8.615850e-47 |
| Msa0125050 | Msa1183100 | -0.825934 | 3.575304e-54 | -8.615850e-47 |
| Msa0125050 | Msa1183350 | 0.802230 | 6.192351e-49 | -8.615850e-47 |
| Msa0125050 | Msa1199070 | 0.807326 | 5.339968e-50 | -8.615850e-47 |
| Msa0125050 | Msa1201560 | 0.803637 | 3.170196e-49 | -8.615850e-47 |
| Msa0125050 | Msa1202770 | -0.834047 | 3.755381e-56 | -8.615850e-47 |
| Msa0125050 | Msa1207380 | 0.822898 | 1.851604e-53 | -8.615850e-47 |
| Msa0125050 | Msa1207420 | 0.805164 | 1.523438e-49 | -8.615850e-47 |
| Msa0125050 | Msa1224480 | 0.821167 | 4.662694e-53 | -8.615850e-47 |
| Msa0125050 | Msa1224580 | -0.819654 | 1.036613e-52 | -8.615850e-47 |
| Msa0125050 | Msa1225730 | -0.807459 | 5.002979e-50 | -8.615850e-47 |
| Msa0125050 | Msa1227330 | 0.802737 | 4.866806e-49 | -8.615850e-47 |
| Msa0125050 | Msa1230830 | 0.811352 | 7.308490e-51 | -8.615850e-47 |
| Msa0125050 | Msa1235400 | 0.839789 | 1.283941e-57 | -8.615850e-47 |
| Msa0125050 | Msa1257600 | 0.823282 | 1.505981e-53 | -8.615850e-47 |
| Msa0125050 | Msa1257800 | -0.808463 | 3.059554e-50 | -8.615850e-47 |
| Msa0125050 | Msa1258370 | 0.812198 | 4.782309e-51 | -8.615850e-47 |
| Msa0125050 | Msa1258380 | -0.835725 | 1.419593e-56 | -8.615850e-47 |
| Msa0125050 | Msa1270660 | 0.827553 | 1.467786e-54 | -8.615850e-47 |
| Msa0125050 | Msa1270730 | 0.821771 | 3.381567e-53 | -8.615850e-47 |
| Msa0125050 | Msa1276510 | 0.814250 | 1.695281e-51 | -8.615850e-47 |
| Msa0125050 | Msa1295540 | -0.817695 | 2.886368e-52 | -8.615850e-47 |
| Msa0125050 | Msa1297290 | 0.803459 | 3.451258e-49 | -8.615850e-47 |
| Msa0125050 | Msa1305350 | 0.815072 | 1.114617e-51 | -8.615850e-47 |
| Msa0125050 | Msa1307740 | 0.820892 | 5.395253e-53 | -8.615850e-47 |
| Msa0125050 | Msa1314770 | 0.836413 | 9.497332e-57 | -8.615850e-47 |
| Msa0125050 | Msa1333730 | 0.809579 | 1.765030e-50 | -8.615850e-47 |
| Msa0125050 | Msa1335230 | 0.819401 | 1.184118e-52 | -8.615850e-47 |
| Msa0125050 | Msa1335710 | 0.806453 | 8.167284e-50 | -8.615850e-47 |
| Msa0125050 | Msa1341810 | 0.817188 | 3.754457e-52 | -8.615850e-47 |
| Msa0125050 | Msa1348470 | -0.814213 | 1.727065e-51 | -8.615850e-47 |
| Msa0125050 | Msa1350720 | 0.806467 | 8.112521e-50 | -8.615850e-47 |
| Msa0125050 | Msa1357890 | 0.802737 | 4.867146e-49 | -8.615850e-47 |
| Msa0125050 | Msa1359920 | 0.809012 | 2.335012e-50 | -8.615850e-47 |
| Msa0125050 | Msa1360240 | 0.841371 | 4.948124e-58 | -8.615850e-47 |
| Msa0125050 | Msa1364370 | 0.826236 | 3.030654e-54 | -8.615850e-47 |
| Msa0125050 | Msa1366300 | 0.805149 | 1.534422e-49 | -8.615850e-47 |
| Msa0125050 | Msa1372150 | 0.826277 | 2.963964e-54 | -8.615850e-47 |
| Msa0125050 | Msa1373350 | 0.806548 | 7.796246e-50 | -8.615850e-47 |
| Msa0125050 | Msa1376130 | 0.804342 | 2.262146e-49 | -8.615850e-47 |
| Msa0125050 | Msa1376160 | -0.825453 | 4.649554e-54 | -8.615850e-47 |
| Msa0125050 | Msa1376890 | 0.835427 | 1.689213e-56 | -8.615850e-47 |
| Msa0125050 | Msa1376930 | 0.836938 | 6.978075e-57 | -8.615850e-47 |
| Msa0125050 | Msa1377570 | 0.811198 | 7.891638e-51 | -8.615850e-47 |
| Msa0125050 | Msa1378230 | 0.804406 | 2.193497e-49 | -8.615850e-47 |
| Msa0125050 | Msa1378940 | 0.821597 | 3.710284e-53 | -8.615850e-47 |
| Msa0125050 | Msa1379590 | 0.834518 | 2.860916e-56 | -8.615850e-47 |
| Msa0125050 | Msa1379850 | 0.828595 | 8.237337e-55 | -8.615850e-47 |
| Msa0125050 | Msa1385000 | 0.802262 | 6.096992e-49 | -8.615850e-47 |
| Msa0125050 | Msa1392700 | 0.806821 | 6.827348e-50 | -8.615850e-47 |
| Msa0125050 | Msa1393770 | -0.803091 | 4.112642e-49 | -8.615850e-47 |
| Msa0125050 | Msa1394310 | 0.809280 | 2.045711e-50 | -8.615850e-47 |
| Msa0125050 | Msa1397120 | 0.825420 | 4.734077e-54 | -8.615850e-47 |
| Msa0125050 | Msa1398090 | 0.806257 | 8.980823e-50 | -8.615850e-47 |
| Msa0125050 | Msa1400070 | 0.802176 | 6.353304e-49 | -8.615850e-47 |
| Msa0125050 | Msa1403890 | 0.819828 | 9.462643e-53 | -8.615850e-47 |
| Msa0125050 | Msa1404240 | -0.834997 | 2.168101e-56 | -8.615850e-47 |
| Msa0125050 | Msa1407600 | 0.816284 | 5.986056e-52 | -8.615850e-47 |
| Msa0125050 | Msa1407650 | 0.818289 | 2.118421e-52 | -8.615850e-47 |
| Msa0125050 | Msa1417810 | -0.806808 | 6.872227e-50 | -8.615850e-47 |
| Msa0125050 | Msa1423820 | 0.814331 | 1.626733e-51 | -8.615850e-47 |
| Msa0125050 | Msa1424640 | 0.831074 | 2.051378e-55 | -8.615850e-47 |
| Msa0125050 | Msa1431060 | 0.800036 | 1.740091e-48 | -8.615850e-47 |
| Msa0125050 | Msa1433220 | 0.804711 | 1.894797e-49 | -8.615850e-47 |
| Msa0125050 | Msa1435400 | 0.833691 | 4.611150e-56 | -8.615850e-47 |
| Msa0125050 | Msa1437130 | 0.831211 | 1.897893e-55 | -8.615850e-47 |
| Msa0125050 | Msa1437910 | 0.812097 | 5.031210e-51 | -8.615850e-47 |
| Msa0125050 | Msa1440940 | 0.856339 | 3.440651e-62 | -8.615850e-47 |
| Msa0125050 | Msa1444250 | -0.846364 | 2.275705e-59 | -8.615850e-47 |
| Msa0125050 | Msa1445400 | -0.807059 | 6.082641e-50 | -8.615850e-47 |
| Msa0125050 | Msa1447150 | 0.835427 | 1.689213e-56 | -8.615850e-47 |
| Msa0125050 | Msa1449350 | -0.817386 | 3.387582e-52 | -8.615850e-47 |
| Msa0125050 | Msa1451620 | -0.835263 | 1.857996e-56 | -8.615850e-47 |
| Msa0125050 | Msa1459050 | 0.800007 | 1.763840e-48 | -8.615850e-47 |
| Msa0125050 | Msa1461810 | -0.815412 | 9.366105e-52 | -8.615850e-47 |
| Msa0125050 | Msa1462060 | 0.836790 | 7.609516e-57 | -8.615850e-47 |
| Msa0125050 | Msa1462070 | 0.815145 | 1.073817e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125050 | MtrunA17_Chr1g0186811 | 99.355 | 310 | 2 | 0 | 1 | 310 | 1 | 310 | 0.0 | 640 |
| Msa0125050 | MtrunA17_Chr1g0190121 | 83.871 | 310 | 50 | 0 | 1 | 310 | 1 | 310 | 0.0 | 566 |
| Msa0125050 | MtrunA17_Chr1g0167751 | 85.531 | 311 | 44 | 1 | 1 | 310 | 1 | 311 | 0.0 | 566 |
| Msa0125050 | MtrunA17_Chr7g0274931 | 84.839 | 310 | 47 | 0 | 1 | 310 | 1 | 310 | 0.0 | 564 |
| Msa0125050 | MtrunA17_Chr5g0436061 | 81.788 | 302 | 54 | 1 | 1 | 301 | 17 | 318 | 0.0 | 526 |
| Msa0125050 | MtrunA17_Chr8g0387541 | 75.728 | 309 | 74 | 1 | 1 | 308 | 1 | 309 | 0.0 | 510 |
| Msa0125050 | MtrunA17_Chr8g0334361 | 77.586 | 290 | 65 | 0 | 6 | 295 | 4 | 293 | 1.68e-177 | 493 |
| Msa0125050 | MtrunA17_Chr7g0272371 | 74.026 | 308 | 74 | 2 | 1 | 308 | 5 | 306 | 2.47e-173 | 483 |
| Msa0125050 | MtrunA17_Chr7g0268381 | 48.175 | 274 | 140 | 2 | 26 | 298 | 27 | 299 | 1.63e-94 | 283 |
| Msa0125050 | MtrunA17_Chr5g0445011 | 47.687 | 281 | 143 | 2 | 26 | 305 | 17 | 294 | 3.65e-94 | 281 |
| Msa0125050 | MtrunA17_Chr8g0364041 | 48.175 | 274 | 140 | 2 | 26 | 298 | 20 | 292 | 6.30e-93 | 278 |
| Msa0125050 | MtrunA17_Chr8g0378521 | 45.608 | 296 | 152 | 3 | 4 | 298 | 7 | 294 | 1.87e-92 | 277 |
| Msa0125050 | MtrunA17_Chr5g0415261 | 48.175 | 274 | 140 | 2 | 26 | 298 | 20 | 292 | 1.32e-91 | 275 |
| Msa0125050 | MtrunA17_Chr1g0165341 | 45.247 | 263 | 141 | 3 | 25 | 285 | 15 | 276 | 1.62e-89 | 270 |
| Msa0125050 | MtrunA17_Chr4g0025471 | 47.869 | 305 | 140 | 8 | 9 | 295 | 649 | 952 | 1.60e-83 | 271 |
| Msa0125050 | MtrunA17_Chr2g0322121 | 46.584 | 322 | 151 | 9 | 9 | 312 | 644 | 962 | 1.86e-83 | 271 |
| Msa0125050 | MtrunA17_Chr3g0097231 | 45.059 | 253 | 132 | 4 | 33 | 279 | 195 | 446 | 8.73e-73 | 232 |
| Msa0125050 | MtrunA17_Chr2g0330311 | 42.642 | 265 | 143 | 6 | 22 | 279 | 211 | 473 | 2.25e-66 | 216 |
| Msa0125050 | MtrunA17_Chr2g0330331 | 42.520 | 254 | 138 | 5 | 33 | 279 | 60 | 312 | 1.06e-61 | 200 |
| Msa0125050 | MtrunA17_Chr1g0196211 | 47.449 | 196 | 95 | 4 | 108 | 295 | 2 | 197 | 2.43e-51 | 170 |
| Msa0125050 | MtrunA17_Chr8g0369981 | 31.746 | 315 | 148 | 10 | 33 | 281 | 100 | 413 | 1.49e-38 | 142 |
| Msa0125050 | MtrunA17_Chr1g0196221 | 46.491 | 114 | 52 | 2 | 3 | 107 | 522 | 635 | 6.12e-24 | 102 |
| Msa0125050 | MtrunA17_Chr2g0330011 | 36.134 | 119 | 66 | 4 | 31 | 140 | 232 | 349 | 7.02e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125050 | AT2G39840.1 | 79.739 | 306 | 61 | 1 | 1 | 305 | 14 | 319 | 0.0 | 527 |
| Msa0125050 | AT5G43380.1 | 78.065 | 310 | 68 | 0 | 1 | 310 | 1 | 310 | 0.0 | 520 |
| Msa0125050 | AT2G29400.1 | 80.592 | 304 | 55 | 3 | 1 | 301 | 15 | 317 | 0.0 | 518 |
| Msa0125050 | AT5G43380.2 | 78.065 | 310 | 68 | 0 | 1 | 310 | 1 | 310 | 0.0 | 518 |
| Msa0125050 | AT5G43380.3 | 78.065 | 310 | 68 | 0 | 1 | 310 | 1 | 310 | 0.0 | 518 |
| Msa0125050 | AT5G59160.3 | 79.208 | 303 | 61 | 2 | 1 | 301 | 9 | 311 | 0.0 | 516 |
| Msa0125050 | AT5G59160.2 | 79.208 | 303 | 61 | 2 | 1 | 301 | 9 | 311 | 0.0 | 516 |
| Msa0125050 | AT5G59160.1 | 79.208 | 303 | 61 | 2 | 1 | 301 | 9 | 311 | 0.0 | 516 |
| Msa0125050 | AT1G64040.1 | 77.597 | 308 | 68 | 1 | 1 | 307 | 1 | 308 | 0.0 | 514 |
| Msa0125050 | AT3G46820.1 | 77.228 | 303 | 67 | 1 | 1 | 301 | 9 | 311 | 0.0 | 505 |
| Msa0125050 | AT4G11240.1 | 73.052 | 308 | 82 | 1 | 1 | 307 | 1 | 308 | 2.94e-177 | 493 |
| Msa0125050 | AT5G27840.1 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 5.26e-174 | 485 |
| Msa0125050 | AT5G27840.4 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 5.90e-174 | 485 |
| Msa0125050 | AT5G27840.2 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 7.37e-174 | 485 |
| Msa0125050 | AT5G27840.3 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 7.37e-174 | 485 |
| Msa0125050 | AT3G05580.1 | 76.190 | 294 | 68 | 1 | 1 | 294 | 9 | 300 | 9.77e-172 | 479 |
| Msa0125050 | AT3G05580.2 | 75.203 | 246 | 59 | 1 | 1 | 246 | 9 | 252 | 3.53e-139 | 394 |
| Msa0125050 | AT5G55260.1 | 48.043 | 281 | 142 | 2 | 26 | 305 | 17 | 294 | 2.46e-96 | 287 |
| Msa0125050 | AT2G42500.1 | 48.540 | 274 | 139 | 2 | 26 | 298 | 27 | 299 | 2.01e-95 | 285 |
| Msa0125050 | AT3G58500.1 | 47.810 | 274 | 141 | 2 | 26 | 298 | 27 | 299 | 6.52e-94 | 281 |
| Msa0125050 | AT1G69960.1 | 46.284 | 296 | 150 | 3 | 4 | 298 | 6 | 293 | 3.30e-93 | 280 |
| Msa0125050 | AT4G26720.1 | 45.230 | 283 | 146 | 2 | 26 | 299 | 17 | 299 | 7.72e-93 | 278 |
| Msa0125050 | AT1G10430.2 | 45.608 | 296 | 152 | 3 | 4 | 298 | 5 | 292 | 3.90e-92 | 276 |
| Msa0125050 | AT1G10430.1 | 45.608 | 296 | 152 | 3 | 4 | 298 | 5 | 292 | 3.90e-92 | 276 |
| Msa0125050 | AT1G59830.1 | 46.284 | 296 | 150 | 3 | 4 | 298 | 5 | 292 | 6.65e-92 | 276 |
| Msa0125050 | AT3G19980.1 | 45.247 | 263 | 141 | 3 | 25 | 285 | 15 | 276 | 4.95e-89 | 269 |
| Msa0125050 | AT1G50370.1 | 44.867 | 263 | 142 | 3 | 25 | 285 | 15 | 276 | 7.56e-89 | 268 |
| Msa0125050 | AT5G55260.2 | 41.925 | 322 | 142 | 3 | 26 | 305 | 17 | 335 | 6.84e-88 | 267 |
| Msa0125050 | AT4G03080.1 | 46.774 | 310 | 148 | 7 | 3 | 295 | 524 | 833 | 2.59e-83 | 269 |
| Msa0125050 | AT2G27210.2 | 47.213 | 305 | 142 | 8 | 9 | 295 | 650 | 953 | 5.94e-82 | 268 |
| Msa0125050 | AT2G27210.1 | 47.213 | 305 | 142 | 8 | 9 | 295 | 655 | 958 | 6.28e-82 | 268 |
| Msa0125050 | AT1G08420.2 | 45.963 | 322 | 153 | 9 | 9 | 312 | 661 | 979 | 2.51e-81 | 266 |
| Msa0125050 | AT1G08420.1 | 45.963 | 322 | 153 | 9 | 9 | 312 | 666 | 984 | 2.64e-81 | 266 |
| Msa0125050 | AT1G59830.2 | 49.004 | 251 | 119 | 3 | 4 | 253 | 5 | 247 | 5.04e-81 | 247 |
| Msa0125050 | AT1G03445.2 | 44.268 | 314 | 147 | 9 | 26 | 315 | 476 | 785 | 4.25e-79 | 256 |
| Msa0125050 | AT1G03445.1 | 46.831 | 284 | 134 | 7 | 26 | 294 | 476 | 757 | 1.04e-78 | 255 |
| Msa0125050 | AT2G42500.2 | 49.321 | 221 | 110 | 2 | 79 | 298 | 33 | 252 | 4.53e-75 | 232 |
| Msa0125050 | AT2G42810.1 | 44.664 | 253 | 133 | 4 | 33 | 279 | 197 | 448 | 9.04e-70 | 225 |
| Msa0125050 | AT2G42810.5 | 44.664 | 253 | 133 | 4 | 33 | 279 | 197 | 448 | 9.04e-70 | 225 |
| Msa0125050 | AT2G42810.4 | 44.664 | 253 | 133 | 4 | 33 | 279 | 197 | 448 | 9.04e-70 | 225 |
| Msa0125050 | AT2G42810.3 | 44.664 | 253 | 133 | 4 | 33 | 279 | 250 | 501 | 2.58e-69 | 225 |
| Msa0125050 | AT2G42810.2 | 44.664 | 253 | 133 | 4 | 33 | 279 | 251 | 502 | 2.69e-69 | 225 |
| Msa0125050 | AT2G42500.4 | 48.299 | 147 | 72 | 3 | 26 | 168 | 27 | 173 | 2.89e-44 | 150 |
| Msa0125050 | AT2G42500.5 | 47.403 | 154 | 75 | 4 | 26 | 175 | 27 | 178 | 9.46e-44 | 148 |
| Msa0125050 | AT2G42500.3 | 50.360 | 139 | 65 | 3 | 26 | 160 | 27 | 165 | 1.44e-43 | 147 |
| Msa0125050 | AT5G63870.1 | 30.473 | 338 | 168 | 11 | 33 | 303 | 52 | 389 | 9.83e-36 | 134 |
| Msa0125050 | AT5G63870.2 | 30.473 | 338 | 168 | 11 | 33 | 303 | 52 | 389 | 9.83e-36 | 134 |
| Msa0125050 | AT1G48120.1 | 29.412 | 340 | 168 | 9 | 31 | 300 | 628 | 965 | 9.41e-30 | 120 |
| Msa0125050 | AT5G63870.3 | 31.200 | 250 | 132 | 6 | 33 | 242 | 52 | 301 | 5.50e-29 | 113 |
| Msa0125050 | AT5G10900.3 | 33.491 | 212 | 117 | 8 | 55 | 245 | 225 | 433 | 1.85e-22 | 98.2 |
| Msa0125050 | AT5G10900.2 | 33.491 | 212 | 117 | 8 | 55 | 245 | 225 | 433 | 1.99e-22 | 98.2 |
| Msa0125050 | AT5G10900.1 | 33.491 | 212 | 117 | 8 | 55 | 245 | 225 | 433 | 2.30e-22 | 98.2 |
Find 67 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCATCTATCATATTAT+TGG | 0.141420 | 1_3:+53256000 | Msa0125050:intron |
| TCAAATTCTCCACAGTAATT+AGG | 0.241896 | 1_3:-53255222 | None:intergenic |
| GTCTATTATGTGACCTCTTA+TGG | 0.268848 | 1_3:+53254910 | Msa0125050:CDS |
| AAATCCGTAGATACGGTTTA+TGG | 0.280200 | 1_3:-53254700 | None:intergenic |
| TGGAAAACAAATTAGAAATA+TGG | 0.286603 | 1_3:+53253187 | Msa0125050:exon |
| TGGAATTGAAATGATATTAT+AGG | 0.288763 | 1_3:-53253010 | None:intergenic |
| AATATACCACAGATCTTAAT+AGG | 0.298021 | 1_3:-53253365 | None:intergenic |
| TGATTTAAATCGTGTAATTC+AGG | 0.302882 | 1_3:-53254846 | None:intergenic |
| ATGATCTTGATTTGATTTGC+AGG | 0.337705 | 1_3:+53255030 | Msa0125050:CDS |
| GGAATTGAAATGATATTATA+GGG | 0.356186 | 1_3:-53253009 | None:intergenic |
| CCGTGTGAAGTTCCTGAATC+TGG | 0.374187 | 1_3:+53254888 | Msa0125050:CDS |
| ATCAAACTTTATATTGTCCT+TGG | 0.375218 | 1_3:+53253167 | Msa0125050:five_prime_UTR |
| GGAAACAATATGTCTTCTTC+TGG | 0.378431 | 1_3:+53254617 | Msa0125050:CDS |
| CGTGGAGTTTCATATACATT+TGG | 0.381055 | 1_3:+53254975 | Msa0125050:CDS |
| TAGTAGTGATGTTCGTGGTT+GGG | 0.384770 | 1_3:+53254941 | Msa0125050:CDS |
| TTTGATTTGCAGGGCTCATC+AGG | 0.392866 | 1_3:+53255040 | Msa0125050:CDS |
| ATTCGTGGTTACCCCTTAGA+AGG | 0.394389 | 1_3:-53254671 | None:intergenic |
| TTGTTGATGGTATTATCAAT+AGG | 0.402079 | 1_3:+53253219 | Msa0125050:CDS |
| AAGAGGAGAGAGGAGAATAA+AGG | 0.413729 | 1_3:-53252975 | None:intergenic |
| TCACATAATAGACCAGATTC+AGG | 0.431932 | 1_3:-53254900 | None:intergenic |
| GAAAGCTGAACCTGCTTCCC+TGG | 0.443268 | 1_3:-53253263 | None:intergenic |
| AGTAGTGATGTTCGTGGTTG+GGG | 0.445269 | 1_3:+53254942 | Msa0125050:CDS |
| TATATTCGAATGAATTCAAA+TGG | 0.447104 | 1_3:-53253048 | None:intergenic |
| ATGGAACGTGGAGTTGTTGA+TGG | 0.454585 | 1_3:+53253206 | Msa0125050:CDS |
| TGATCGCGGAAAACAAAGTC+TGG | 0.454667 | 1_3:+53254596 | Msa0125050:CDS |
| AAGAGGAAGACCAGGGAAGC+AGG | 0.459465 | 1_3:+53253253 | Msa0125050:CDS |
| GGAGATACAATGTGAAGCTA+TGG | 0.485510 | 1_3:+53254739 | Msa0125050:CDS |
| CAACCACGAACATCACTACT+AGG | 0.486128 | 1_3:-53254939 | None:intergenic |
| GCCTCTAGTTTCAAGAGATT+AGG | 0.495023 | 1_3:-53253341 | None:intergenic |
| AAGAAACTCTTTAACCCTAT+CGG | 0.496948 | 1_3:-53255000 | None:intergenic |
| AATAGGTTACTTGAAGTAAG+AGG | 0.499906 | 1_3:+53253236 | Msa0125050:CDS |
| CTAGTAGTGATGTTCGTGGT+TGG | 0.504572 | 1_3:+53254940 | Msa0125050:CDS |
| AAAGCTTATAAGAAGAGTAG+TGG | 0.505031 | 1_3:-53253081 | None:intergenic |
| TACTAGGATCAGACCATAAG+AGG | 0.507611 | 1_3:-53254923 | None:intergenic |
| TGATCTTGATTTGATTTGCA+GGG | 0.513485 | 1_3:+53255031 | Msa0125050:CDS |
| ATAGGGAAGAGAAGGAAAAG+AGG | 0.515936 | 1_3:-53252992 | None:intergenic |
| GTCAATATTCCGACCTTCTG+AGG | 0.519601 | 1_3:+53254514 | Msa0125050:CDS |
| ATGATATTATAGGGAAGAGA+AGG | 0.520199 | 1_3:-53253000 | None:intergenic |
| AGAGAAGGAAAAGAGGAGAG+AGG | 0.521148 | 1_3:-53252985 | None:intergenic |
| CTTGAAGTAAGAGGAAGACC+AGG | 0.522885 | 1_3:+53253245 | Msa0125050:CDS |
| ATATACATTTGGTGCCGATA+GGG | 0.527545 | 1_3:+53254986 | Msa0125050:CDS |
| CTAGTTTCAAGAGATTAGGC+TGG | 0.529287 | 1_3:-53253337 | None:intergenic |
| CATCATAAAATCCGTAGATA+CGG | 0.530362 | 1_3:-53254707 | None:intergenic |
| CATATACATTTGGTGCCGAT+AGG | 0.532156 | 1_3:+53254985 | Msa0125050:CDS |
| TTGTTGCAGGTTGTGGAAGA+CGG | 0.543349 | 1_3:+53255153 | Msa0125050:intron |
| GTGCTTCCAAAGCTAAACTT+AGG | 0.544982 | 1_3:-53255321 | None:intergenic |
| CTCGAAAAGCCTCAGAAGGT+CGG | 0.552388 | 1_3:-53254523 | None:intergenic |
| ATGTTACCAGGAGATATTCA+CGG | 0.557094 | 1_3:+53254492 | Msa0125050:intron |
| GGTTTATGGAAGCACATTCG+TGG | 0.557667 | 1_3:-53254686 | None:intergenic |
| TGTGGAGAATTTGACAATGC+TGG | 0.567360 | 1_3:+53255231 | Msa0125050:CDS |
| TTTCAATTGTTTGCCTGTGG+CGG | 0.574441 | 1_3:+53254779 | Msa0125050:CDS |
| GCTTCCATAAACCGTATCTA+CGG | 0.579276 | 1_3:+53254696 | Msa0125050:CDS |
| GAAAAGATTATTTGTATGCA+TGG | 0.580156 | 1_3:+53254813 | Msa0125050:CDS |
| ATAAAGGTGATGATGATACA+TGG | 0.590344 | 1_3:-53252959 | None:intergenic |
| GATCCTAGTAGTGATGTTCG+TGG | 0.596697 | 1_3:+53254936 | Msa0125050:CDS |
| TCATCAATGAGAGCCGCCAC+AGG | 0.602243 | 1_3:-53254792 | None:intergenic |
| GGTTGGGGAGAAAGCGAGCG+TGG | 0.603320 | 1_3:+53254957 | Msa0125050:CDS |
| TTGTTTCAATTGTTTGCCTG+TGG | 0.606705 | 1_3:+53254776 | Msa0125050:CDS |
| CAAATTAGAAATATGGAACG+TGG | 0.634209 | 1_3:+53253194 | Msa0125050:exon |
| AATAAATAATTCGAGCGAGG+AGG | 0.639135 | 1_3:-53254558 | None:intergenic |
| CCAGATTCAGGAACTTCACA+CGG | 0.648649 | 1_3:-53254888 | None:intergenic |
| GAGGCACCTATTAAGATCTG+TGG | 0.649585 | 1_3:+53253359 | Msa0125050:CDS |
| CGTACTCGAAAAGCCTCAGA+AGG | 0.657790 | 1_3:-53254527 | None:intergenic |
| TTAGGAGACTATGTTGATCG+CGG | 0.661259 | 1_3:+53254582 | Msa0125050:CDS |
| GCCTAATCTCTTGAAACTAG+AGG | 0.671584 | 1_3:+53253340 | Msa0125050:CDS |
| TTGAAGTAAGAGGAAGACCA+GGG | 0.672507 | 1_3:+53253246 | Msa0125050:CDS |
| AAGATTATTTGTATGCATGG+TGG | 0.686892 | 1_3:+53254816 | Msa0125050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTGATTTAATTAGTAT+AGG | + | chr1_3:53253420-53253439 | Msa0125050:intron | 10.0% |
| !! | TCAATTATATTTATCATAAT+TGG | + | chr1_3:53253484-53253503 | Msa0125050:intron | 10.0% |
| !!! | TTTAATTAAGATTAATTTTG+AGG | + | chr1_3:53254296-53254315 | Msa0125050:intron | 10.0% |
| !! | CATACAAAGTAAATTATATA+TGG | + | chr1_3:53253689-53253708 | Msa0125050:intron | 15.0% |
| !! | AAAAAAATTATGTATTGTCT+AGG | + | chr1_3:53253725-53253744 | Msa0125050:intron | 15.0% |
| !! | AAAAAATTATGTATTGTCTA+GGG | + | chr1_3:53253726-53253745 | Msa0125050:intron | 15.0% |
| !!! | CTTTAAAAACTTTTATATTG+CGG | + | chr1_3:53253960-53253979 | Msa0125050:intron | 15.0% |
| !! | AAATATGATACTAGAAAATT+TGG | - | chr1_3:53254412-53254431 | None:intergenic | 15.0% |
| !! | TTATGTATAAACTTAGAATT+TGG | - | chr1_3:53255109-53255128 | None:intergenic | 15.0% |
| !! | TTCTAAGTTTATACATAATA+AGG | + | chr1_3:53255111-53255130 | Msa0125050:intron | 15.0% |
| !!! | AGTATGTCTTTTAAAAAAAA+AGG | - | chr1_3:53255521-53255540 | None:intergenic | 15.0% |
| !!! | TAAATATTTCTTTCTTTTGA+TGG | + | chr1_3:53255792-53255811 | Msa0125050:intron | 15.0% |
| !! | GGAATTGAAATGATATTATA+GGG | - | chr1_3:53253012-53253031 | None:intergenic | 20.0% |
| !! | TGGAATTGAAATGATATTAT+AGG | - | chr1_3:53253013-53253032 | None:intergenic | 20.0% |
| !! | TATATTCGAATGAATTCAAA+TGG | - | chr1_3:53253051-53253070 | None:intergenic | 20.0% |
| !!! | TATTTCTAATTTGTTTTCCA+AGG | - | chr1_3:53253187-53253206 | None:intergenic | 20.0% |
| !! | TGGAAAACAAATTAGAAATA+TGG | + | chr1_3:53253187-53253206 | Msa0125050:exon | 20.0% |
| !! | TAATAGTTAAAGAGAGAAAA+AGG | - | chr1_3:53253513-53253532 | None:intergenic | 20.0% |
| !!! | TTACAAATTTTAAAGTGACA+CGG | + | chr1_3:53253530-53253549 | Msa0125050:intron | 20.0% |
| !!! | TCTAAAATTGTTTTAATGTC+AGG | - | chr1_3:53253651-53253670 | None:intergenic | 20.0% |
| !!! | TAGTATTTTTTATATTTGCC+AGG | + | chr1_3:53253864-53253883 | Msa0125050:intron | 20.0% |
| !! | TGAAACAAGAATGAATAATT+AGG | - | chr1_3:53254215-53254234 | None:intergenic | 20.0% |
| !! | TCTTAATTAAACTTAATGAG+AGG | - | chr1_3:53254287-53254306 | None:intergenic | 20.0% |
| !!! | TAAAAACTTTTTCCTTCTAA+GGG | + | chr1_3:53254659-53254678 | Msa0125050:CDS | 20.0% |
| !!! | GATTTTATGATGAATGTAAA+AGG | + | chr1_3:53254718-53254737 | Msa0125050:CDS | 20.0% |
| !!! | TTTTGAATATGTAATCTCAA+GGG | - | chr1_3:53255497-53255516 | None:intergenic | 20.0% |
| !!! | ATTTTGAATATGTAATCTCA+AGG | - | chr1_3:53255498-53255517 | None:intergenic | 20.0% |
| !! | AGATTCATCTATCATATTAT+TGG | + | chr1_3:53256000-53256019 | Msa0125050:intron | 20.0% |
| ! | ATCAAACTTTATATTGTCCT+TGG | + | chr1_3:53253167-53253186 | Msa0125050:five_prime_UTR | 25.0% |
| !!! | TTGTTGATGGTATTATCAAT+AGG | + | chr1_3:53253219-53253238 | Msa0125050:CDS | 25.0% |
| ! | AATATACCACAGATCTTAAT+AGG | - | chr1_3:53253368-53253387 | None:intergenic | 25.0% |
| !!! | AGGATTTAATTTGTATACGT+CGG | + | chr1_3:53253440-53253459 | Msa0125050:intron | 25.0% |
| !!! | AGTTTTTAAAGTCTATGCAA+TGG | - | chr1_3:53253951-53253970 | None:intergenic | 25.0% |
| ! | CATCAGTTTAATTAGAATTG+TGG | - | chr1_3:53254170-53254189 | None:intergenic | 25.0% |
| ! | CAATTCTAATTAAACTGATG+TGG | + | chr1_3:53254170-53254189 | Msa0125050:intron | 25.0% |
| ! | AGGTGAAATATCAAATATGT+TGG | - | chr1_3:53254356-53254375 | None:intergenic | 25.0% |
| ! | AAAAATAAATAATTCGAGCG+AGG | - | chr1_3:53254564-53254583 | None:intergenic | 25.0% |
| !!! | CGCTCGAATTATTTATTTTT+AGG | + | chr1_3:53254564-53254583 | Msa0125050:CDS | 25.0% |
| !! | CTTAGAAGGAAAAAGTTTTT+AGG | - | chr1_3:53254660-53254679 | None:intergenic | 25.0% |
| !!! | CTAAAAACTTTTTCCTTCTA+AGG | + | chr1_3:53254658-53254677 | Msa0125050:CDS | 25.0% |
| !!! | AAAAACTTTTTCCTTCTAAG+GGG | + | chr1_3:53254660-53254679 | Msa0125050:CDS | 25.0% |
| ! | GAAAAGATTATTTGTATGCA+TGG | + | chr1_3:53254813-53254832 | Msa0125050:CDS | 25.0% |
| ! | TGATTTAAATCGTGTAATTC+AGG | - | chr1_3:53254849-53254868 | None:intergenic | 25.0% |
| !! | TGTAATTTTCTTTTTGTTGC+AGG | + | chr1_3:53255140-53255159 | Msa0125050:intron | 25.0% |
| !! | GATATCTAATGTTTGAAATG+TGG | + | chr1_3:53255689-53255708 | Msa0125050:intron | 25.0% |
| !!! | GTGTCATTTTTCTTTTCTTT+TGG | + | chr1_3:53255863-53255882 | Msa0125050:intron | 25.0% |
| ! | ATAAAGGTGATGATGATACA+TGG | - | chr1_3:53252962-53252981 | None:intergenic | 30.0% |
| ATGATATTATAGGGAAGAGA+AGG | - | chr1_3:53253003-53253022 | None:intergenic | 30.0% | |
| AATGGAAAAAGAGAAGATAG+TGG | - | chr1_3:53253033-53253052 | None:intergenic | 30.0% | |
| AAAGCTTATAAGAAGAGTAG+TGG | - | chr1_3:53253084-53253103 | None:intergenic | 30.0% | |
| CAAATTAGAAATATGGAACG+TGG | + | chr1_3:53253194-53253213 | Msa0125050:exon | 30.0% | |
| AATAGGTTACTTGAAGTAAG+AGG | + | chr1_3:53253236-53253255 | Msa0125050:CDS | 30.0% | |
| ! | TAATTTGTATACGTCGGTAA+AGG | + | chr1_3:53253446-53253465 | Msa0125050:intron | 30.0% |
| !! | TCGTCGTAACAAGTTTTATA+CGG | - | chr1_3:53253578-53253597 | None:intergenic | 30.0% |
| TCTCATTATTAAGCTATGTG+TGG | + | chr1_3:53253616-53253635 | Msa0125050:intron | 30.0% | |
| AAATTATGTATTGTCTAGGG+CGG | + | chr1_3:53253729-53253748 | Msa0125050:intron | 30.0% | |
| !! | TAAAGGTGTTACATAGGTAA+AGG | - | chr1_3:53253904-53253923 | None:intergenic | 30.0% |
| ! | TTTTATAGTTTAGCGAATCG+CGG | - | chr1_3:53254005-53254024 | None:intergenic | 30.0% |
| ! | ACTGTTGTTGTTATAGAAGT+AGG | + | chr1_3:53254061-53254080 | Msa0125050:intron | 30.0% |
| ! | CTGTTGTTGTTATAGAAGTA+GGG | + | chr1_3:53254062-53254081 | Msa0125050:intron | 30.0% |
| CTTAATCAAGATTGATCTTG+TGG | + | chr1_3:53254257-53254276 | Msa0125050:intron | 30.0% | |
| AACTCTACCTTAATGAAGAA+AGG | - | chr1_3:53254380-53254399 | None:intergenic | 30.0% | |
| TTGAAACAAGACATTAGCAT+AGG | - | chr1_3:53254466-53254485 | None:intergenic | 30.0% | |
| TTTCAATTCTCTATGTTACC+AGG | + | chr1_3:53254480-53254499 | Msa0125050:intron | 30.0% | |
| CATCATAAAATCCGTAGATA+CGG | - | chr1_3:53254710-53254729 | None:intergenic | 30.0% | |
| AAGATTATTTGTATGCATGG+TGG | + | chr1_3:53254816-53254835 | Msa0125050:CDS | 30.0% | |
| AAGAAACTCTTTAACCCTAT+CGG | - | chr1_3:53255003-53255022 | None:intergenic | 30.0% | |
| !! | ATGATCTTGATTTGATTTGC+AGG | + | chr1_3:53255030-53255049 | Msa0125050:CDS | 30.0% |
| !! | TGATCTTGATTTGATTTGCA+GGG | + | chr1_3:53255031-53255050 | Msa0125050:CDS | 30.0% |
| TCAAATTCTCCACAGTAATT+AGG | - | chr1_3:53255225-53255244 | None:intergenic | 30.0% | |
| ! | AACTTAGGCTTTTTATCAAG+AGG | - | chr1_3:53255309-53255328 | None:intergenic | 30.0% |
| ! | AAAAAGCCTAAGTTTAGCTT+TGG | + | chr1_3:53255315-53255334 | Msa0125050:CDS | 30.0% |
| CAAAATACCTTGAACTTTGT+TGG | - | chr1_3:53255369-53255388 | None:intergenic | 30.0% | |
| GTATATATCAGTTGTTCATG+AGG | - | chr1_3:53255568-53255587 | None:intergenic | 30.0% | |
| ATATTGTCAAACGCAATTGA+AGG | + | chr1_3:53255834-53255853 | Msa0125050:intron | 30.0% | |
| GCATTATTGAATCTAGAAAC+AGG | - | chr1_3:53255967-53255986 | None:intergenic | 30.0% | |
| !! | AGGGATTAAAGGTGTTACAT+AGG | - | chr1_3:53253910-53253929 | None:intergenic | 35.0% |
| TTGTTATAGAAGTAGGGAGT+AGG | + | chr1_3:53254068-53254087 | Msa0125050:intron | 35.0% | |
| TGTTATAGAAGTAGGGAGTA+GGG | + | chr1_3:53254069-53254088 | Msa0125050:intron | 35.0% | |
| !!! | ACTCTGAAAGCTCTGTTTTT+TGG | + | chr1_3:53254108-53254127 | Msa0125050:intron | 35.0% |
| !!! | TGAAAGCTCTGTTTTTTGGT+TGG | + | chr1_3:53254112-53254131 | Msa0125050:intron | 35.0% |
| AGCATATATCAGACCCTTTA+TGG | + | chr1_3:53254141-53254160 | Msa0125050:intron | 35.0% | |
| AGAATTGTGGAGTCCATAAA+GGG | - | chr1_3:53254157-53254176 | None:intergenic | 35.0% | |
| TAGAATTGTGGAGTCCATAA+AGG | - | chr1_3:53254158-53254177 | None:intergenic | 35.0% | |
| TCACCTACCTTTCTTCATTA+AGG | + | chr1_3:53254370-53254389 | Msa0125050:intron | 35.0% | |
| CTACCTTAATGAAGAAAGGT+AGG | - | chr1_3:53254376-53254395 | None:intergenic | 35.0% | |
| ATGTTACCAGGAGATATTCA+CGG | + | chr1_3:53254492-53254511 | Msa0125050:intron | 35.0% | |
| AATAAATAATTCGAGCGAGG+AGG | - | chr1_3:53254561-53254580 | None:intergenic | 35.0% | |
| GGAAACAATATGTCTTCTTC+TGG | + | chr1_3:53254617-53254636 | Msa0125050:CDS | 35.0% | |
| AAATCCGTAGATACGGTTTA+TGG | - | chr1_3:53254703-53254722 | None:intergenic | 35.0% | |
| TTGTTTCAATTGTTTGCCTG+TGG | + | chr1_3:53254776-53254795 | Msa0125050:CDS | 35.0% | |
| TCACATAATAGACCAGATTC+AGG | - | chr1_3:53254903-53254922 | None:intergenic | 35.0% | |
| GTCTATTATGTGACCTCTTA+TGG | + | chr1_3:53254910-53254929 | Msa0125050:CDS | 35.0% | |
| CGTGGAGTTTCATATACATT+TGG | + | chr1_3:53254975-53254994 | Msa0125050:CDS | 35.0% | |
| !! | ATATACATTTGGTGCCGATA+GGG | + | chr1_3:53254986-53255005 | Msa0125050:CDS | 35.0% |
| ! | TTTCTTTTTGTTGCAGGTTG+TGG | + | chr1_3:53255146-53255165 | Msa0125050:intron | 35.0% |
| ! | TTTTCAGCACCTAATTACTG+TGG | + | chr1_3:53255213-53255232 | Msa0125050:CDS | 35.0% |
| TAGTAGTCCAACAAAGTTCA+AGG | + | chr1_3:53255359-53255378 | Msa0125050:intron | 35.0% | |
| TATGCGGGAAAGTTGTAAAA+TGG | - | chr1_3:53255459-53255478 | None:intergenic | 35.0% | |
| ! | ATTTTACAACTTTCCCGCAT+AGG | + | chr1_3:53255458-53255477 | Msa0125050:intron | 35.0% |
| GAATATGTAATCTCAAGGGA+CGG | - | chr1_3:53255493-53255512 | None:intergenic | 35.0% | |
| ! | CAAAAAATGCTTGCTGAAAG+TGG | - | chr1_3:53255637-53255656 | None:intergenic | 35.0% |
| !!! | CACTTTCAGCAAGCATTTTT+TGG | + | chr1_3:53255635-53255654 | Msa0125050:intron | 35.0% |
| AATATTTAGCTGTCCCTGAA+GGG | - | chr1_3:53255780-53255799 | None:intergenic | 35.0% | |
| AAATATTTAGCTGTCCCTGA+AGG | - | chr1_3:53255781-53255800 | None:intergenic | 35.0% | |
| GCGTTTGACAATATTGTACA+AGG | - | chr1_3:53255828-53255847 | None:intergenic | 35.0% | |
| AAGAGGAGAGAGGAGAATAA+AGG | - | chr1_3:53252978-53252997 | None:intergenic | 40.0% | |
| ATAGGGAAGAGAAGGAAAAG+AGG | - | chr1_3:53252995-53253014 | None:intergenic | 40.0% | |
| TTGAAGTAAGAGGAAGACCA+GGG | + | chr1_3:53253246-53253265 | Msa0125050:CDS | 40.0% | |
| CTAGTTTCAAGAGATTAGGC+TGG | - | chr1_3:53253340-53253359 | None:intergenic | 40.0% | |
| GCCTAATCTCTTGAAACTAG+AGG | + | chr1_3:53253340-53253359 | Msa0125050:CDS | 40.0% | |
| ! | GCCTCTAGTTTCAAGAGATT+AGG | - | chr1_3:53253344-53253363 | None:intergenic | 40.0% |
| ATTTGCCAGGATTCGAAGTT+TGG | + | chr1_3:53253877-53253896 | Msa0125050:intron | 40.0% | |
| !!! | AGCTCTGTTTTTTGGTTGGT+AGG | + | chr1_3:53254116-53254135 | Msa0125050:intron | 40.0% |
| ! | ATGCTTTTCCCAACACTATG+TGG | + | chr1_3:53254440-53254459 | Msa0125050:intron | 40.0% |
| TATTGACCGTGAATATCTCC+TGG | - | chr1_3:53254501-53254520 | None:intergenic | 40.0% | |
| TTAGGAGACTATGTTGATCG+CGG | + | chr1_3:53254582-53254601 | Msa0125050:CDS | 40.0% | |
| GCTTCCATAAACCGTATCTA+CGG | + | chr1_3:53254696-53254715 | Msa0125050:CDS | 40.0% | |
| GGAGATACAATGTGAAGCTA+TGG | + | chr1_3:53254739-53254758 | Msa0125050:CDS | 40.0% | |
| TTTCAATTGTTTGCCTGTGG+CGG | + | chr1_3:53254779-53254798 | Msa0125050:CDS | 40.0% | |
| TACTAGGATCAGACCATAAG+AGG | - | chr1_3:53254926-53254945 | None:intergenic | 40.0% | |
| TAGTAGTGATGTTCGTGGTT+GGG | + | chr1_3:53254941-53254960 | Msa0125050:CDS | 40.0% | |
| !! | CATATACATTTGGTGCCGAT+AGG | + | chr1_3:53254985-53255004 | Msa0125050:CDS | 40.0% |
| TGTGGAGAATTTGACAATGC+TGG | + | chr1_3:53255231-53255250 | Msa0125050:CDS | 40.0% | |
| GTGCTTCCAAAGCTAAACTT+AGG | - | chr1_3:53255324-53255343 | None:intergenic | 40.0% | |
| ! | AAAATGCTTGCTGAAAGTGG+AGG | - | chr1_3:53255634-53255653 | None:intergenic | 40.0% |
| GGTGCTAAAGAATGACTTGA+TGG | + | chr1_3:53255656-53255675 | Msa0125050:intron | 40.0% | |
| ! | GTTTGAAATGTGGCCAAAGT+TGG | + | chr1_3:53255699-53255718 | Msa0125050:intron | 40.0% |
| CTTTCTTTCCAAGCCAACTT+TGG | - | chr1_3:53255715-53255734 | None:intergenic | 40.0% | |
| AGAGAAGGAAAAGAGGAGAG+AGG | - | chr1_3:53252988-53253007 | None:intergenic | 45.0% | |
| ATGGAACGTGGAGTTGTTGA+TGG | + | chr1_3:53253206-53253225 | Msa0125050:CDS | 45.0% | |
| CTTGAAGTAAGAGGAAGACC+AGG | + | chr1_3:53253245-53253264 | Msa0125050:CDS | 45.0% | |
| ! | GAGGCACCTATTAAGATCTG+TGG | + | chr1_3:53253359-53253378 | Msa0125050:CDS | 45.0% |
| GCTTGCAAATACAGCTGATG+TGG | + | chr1_3:53253775-53253794 | Msa0125050:intron | 45.0% | |
| AAGGTCCAAACTTCGAATCC+TGG | - | chr1_3:53253885-53253904 | None:intergenic | 45.0% | |
| CGGTTGAGCTAAGGGATTAA+AGG | - | chr1_3:53253921-53253940 | None:intergenic | 45.0% | |
| GTAGGGAGTAGGGATCAAAT+TGG | + | chr1_3:53254079-53254098 | Msa0125050:intron | 45.0% | |
| AGCATAGGCCACATAGTGTT+GGG | - | chr1_3:53254451-53254470 | None:intergenic | 45.0% | |
| TAGCATAGGCCACATAGTGT+TGG | - | chr1_3:53254452-53254471 | None:intergenic | 45.0% | |
| GTCAATATTCCGACCTTCTG+AGG | + | chr1_3:53254514-53254533 | Msa0125050:CDS | 45.0% | |
| !!! | CTTCTGAGGCTTTTCGAGTA+CGG | + | chr1_3:53254528-53254547 | Msa0125050:CDS | 45.0% |
| TGATCGCGGAAAACAAAGTC+TGG | + | chr1_3:53254596-53254615 | Msa0125050:CDS | 45.0% | |
| ATTCGTGGTTACCCCTTAGA+AGG | - | chr1_3:53254674-53254693 | None:intergenic | 45.0% | |
| ! | GGTTTATGGAAGCACATTCG+TGG | - | chr1_3:53254689-53254708 | None:intergenic | 45.0% |
| CCAGATTCAGGAACTTCACA+CGG | - | chr1_3:53254891-53254910 | None:intergenic | 45.0% | |
| GATCCTAGTAGTGATGTTCG+TGG | + | chr1_3:53254936-53254955 | Msa0125050:CDS | 45.0% | |
| CAACCACGAACATCACTACT+AGG | - | chr1_3:53254942-53254961 | None:intergenic | 45.0% | |
| CTAGTAGTGATGTTCGTGGT+TGG | + | chr1_3:53254940-53254959 | Msa0125050:CDS | 45.0% | |
| AGTAGTGATGTTCGTGGTTG+GGG | + | chr1_3:53254942-53254961 | Msa0125050:CDS | 45.0% | |
| !! | TTTGATTTGCAGGGCTCATC+AGG | + | chr1_3:53255040-53255059 | Msa0125050:CDS | 45.0% |
| TTGTTGCAGGTTGTGGAAGA+CGG | + | chr1_3:53255153-53255172 | Msa0125050:intron | 45.0% | |
| TGAATGCACAACTTGCACTG+AGG | + | chr1_3:53255395-53255414 | Msa0125050:intron | 45.0% | |
| ACAACTTGCACTGAGGTAGA+GGG | + | chr1_3:53255402-53255421 | Msa0125050:intron | 45.0% | |
| AAATGTGGCCAAAGTTGGCT+TGG | + | chr1_3:53255704-53255723 | Msa0125050:intron | 45.0% | |
| AAGTCTCTGCTTTACCCTTC+AGG | + | chr1_3:53255763-53255782 | Msa0125050:intron | 45.0% | |
| AGTCTCTGCTTTACCCTTCA+GGG | + | chr1_3:53255764-53255783 | Msa0125050:intron | 45.0% | |
| GTCTATGCAATGGCATCGCT+CGG | - | chr1_3:53253941-53253960 | None:intergenic | 50.0% | |
| CTCGAAAAGCCTCAGAAGGT+CGG | - | chr1_3:53254526-53254545 | None:intergenic | 50.0% | |
| CGTACTCGAAAAGCCTCAGA+AGG | - | chr1_3:53254530-53254549 | None:intergenic | 50.0% | |
| CCGTGTGAAGTTCCTGAATC+TGG | + | chr1_3:53254888-53254907 | Msa0125050:CDS | 50.0% | |
| CACAACTTGCACTGAGGTAG+AGG | + | chr1_3:53255401-53255420 | Msa0125050:intron | 50.0% | |
| ACGGAGTACAAAGCCTATGC+GGG | - | chr1_3:53255474-53255493 | None:intergenic | 50.0% | |
| GACGGAGTACAAAGCCTATG+CGG | - | chr1_3:53255475-53255494 | None:intergenic | 50.0% | |
| AAGAGGAAGACCAGGGAAGC+AGG | + | chr1_3:53253253-53253272 | Msa0125050:CDS | 55.0% | |
| GAAAGCTGAACCTGCTTCCC+TGG | - | chr1_3:53253266-53253285 | None:intergenic | 55.0% | |
| ! | TGTCTAGGGCGGTTGCAGTT+AGG | + | chr1_3:53253740-53253759 | Msa0125050:intron | 55.0% |
| GCATCGCTCGGTTGAGCTAA+GGG | - | chr1_3:53253929-53253948 | None:intergenic | 55.0% | |
| !!! | CTGAGGCTTTTCGAGTACGG+TGG | + | chr1_3:53254531-53254550 | Msa0125050:CDS | 55.0% |
| TCATCAATGAGAGCCGCCAC+AGG | - | chr1_3:53254795-53254814 | None:intergenic | 55.0% | |
| GGCATCGCTCGGTTGAGCTA+AGG | - | chr1_3:53253930-53253949 | None:intergenic | 60.0% | |
| GGTTGGGGAGAAAGCGAGCG+TGG | + | chr1_3:53254957-53254976 | Msa0125050:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 53252958 | 53256041 | 53252958 | ID=Msa0125050;Name=Msa0125050 |
| chr1_3 | mRNA | 53252958 | 53256041 | 53252958 | ID=Msa0125050-mRNA-1;Parent=Msa0125050;Name=Msa0125050-mRNA-1;_AED=0.20;_eAED=0.21;_QI=248|0.66|0.5|1|0.66|0.5|4|0|322 |
| chr1_3 | exon | 53252958 | 53253380 | 53252958 | ID=Msa0125050-mRNA-1:exon:16330;Parent=Msa0125050-mRNA-1 |
| chr1_3 | exon | 53254502 | 53255061 | 53254502 | ID=Msa0125050-mRNA-1:exon:16331;Parent=Msa0125050-mRNA-1 |
| chr1_3 | exon | 53255162 | 53255355 | 53255162 | ID=Msa0125050-mRNA-1:exon:16332;Parent=Msa0125050-mRNA-1 |
| chr1_3 | exon | 53256002 | 53256041 | 53256002 | ID=Msa0125050-mRNA-1:exon:16333;Parent=Msa0125050-mRNA-1 |
| chr1_3 | five_prime_UTR | 53252958 | 53253205 | 53252958 | ID=Msa0125050-mRNA-1:five_prime_utr;Parent=Msa0125050-mRNA-1 |
| chr1_3 | CDS | 53253206 | 53253380 | 53253206 | ID=Msa0125050-mRNA-1:cds;Parent=Msa0125050-mRNA-1 |
| chr1_3 | CDS | 53254502 | 53255061 | 53254502 | ID=Msa0125050-mRNA-1:cds;Parent=Msa0125050-mRNA-1 |
| chr1_3 | CDS | 53255162 | 53255355 | 53255162 | ID=Msa0125050-mRNA-1:cds;Parent=Msa0125050-mRNA-1 |
| chr1_3 | CDS | 53256002 | 53256041 | 53256002 | ID=Msa0125050-mRNA-1:cds;Parent=Msa0125050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
