AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1391750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1391750 MtrunA17_Chr7g0270071 97.007 568 15 1 1 568 1 566 0.0 1106
Msa1391750 MtrunA17_Chr4g0068311 38.785 428 196 13 144 568 52 416 3.94e-61 207
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1391750 AT2G47350.1 43.979 573 217 21 1 561 1 481 9.24e-114 347
Msa1391750 AT1G56460.1 41.278 579 244 18 1 560 1 502 1.60e-88 283
Msa1391750 AT1G56460.2 39.339 605 249 18 1 560 1 532 8.25e-84 271
Msa1391750 AT3G06660.1 43.231 458 188 16 109 561 29 419 1.85e-63 214
Msa1391750 AT1G56460.3 37.478 571 259 19 1 552 1 492 1.84e-60 209
Msa1391750 AT2G47350.2 38.344 459 182 19 1 447 1 370 1.01e-55 192

Find 169 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCTAGATGTGTTCTTTA+TGG 0.097216 tig0021446:-104001 None:intergenic
TTCGAAAAGCTCTCGTTTAT+CGG 0.231676 tig0021446:+103265 Msa1391750:CDS
ACTCTCTAGCGTCTCTAATA+TGG 0.265515 tig0021446:+104200 Msa1391750:CDS
GATTTCAAAAGGGGCGGATT+TGG 0.281044 tig0021446:+103943 Msa1391750:CDS
CTCTGTGATGATTGGATATA+TGG 0.290761 tig0021446:-102441 None:intergenic
GTGTTCTTGCTCCTGCTAAT+TGG 0.295171 tig0021446:+103024 Msa1391750:CDS
TTTGAATCCCGGTATTTATA+CGG 0.300042 tig0021446:-105647 None:intergenic
TGTCAATAGTCCTCCATTGC+TGG 0.317082 tig0021446:+105756 Msa1391750:three_prime_UTR
ACAGAATTACCTGTTGCTTT+TGG 0.329755 tig0021446:-103304 None:intergenic
TCTATGATAATACAGGCTTT+AGG 0.334370 tig0021446:+105814 Msa1391750:three_prime_UTR
GAATCCTGAGAGTACAAGTT+TGG 0.340010 tig0021446:+103118 Msa1391750:CDS
CCACAATATTTGTCACGTTA+AGG 0.353631 tig0021446:+105934 Msa1391750:three_prime_UTR
TCTGCATCTAACAGTGCTTC+AGG 0.354010 tig0021446:+103230 Msa1391750:CDS
AAACCTGTGCCAGATCTTCT+TGG 0.361784 tig0021446:-104853 None:intergenic
TATGAGGATGAAGTGGAATC+AGG 0.367393 tig0021446:+104300 Msa1391750:CDS
GCCGTGGCCTGCGCGATGGT+TGG 0.370228 tig0021446:-102779 None:intergenic
CCTTCCACGGAAGGCCTTTG+AGG 0.388383 tig0021446:-103921 None:intergenic
AATCCTGAGAGTACAAGTTT+GGG 0.390497 tig0021446:+103119 Msa1391750:CDS
TGATGCATGCTTCTCTGCTT+CGG 0.395089 tig0021446:-104964 None:intergenic
GGGCAGCTTCAAGATGGATT+GGG 0.397967 tig0021446:+103140 Msa1391750:CDS
GACTCTTACAACGCGTCAAC+GGG 0.398062 tig0021446:+104407 Msa1391750:CDS
AAAGGGGCGGATTTGGTGTC+GGG 0.399013 tig0021446:+103950 Msa1391750:CDS
CGTCAACGGGCCCTTCAATC+AGG 0.406481 tig0021446:+104420 Msa1391750:CDS
TGGCAGTTTGTGGCGGTTGA+CGG 0.410681 tig0021446:-102331 None:intergenic
ATGGATTGGGGAGTGAGAAC+AGG 0.411464 tig0021446:+103153 Msa1391750:CDS
ATGTTTATCTATGATAATAC+AGG 0.418861 tig0021446:+105807 Msa1391750:three_prime_UTR
TTAGGATCTACCCGGTTTGA+TGG 0.419286 tig0021446:+102726 Msa1391750:CDS
AAGCATCTTTGCCTGATTGA+AGG 0.423912 tig0021446:-104431 None:intergenic
TTCCGTGGAAGGATTTCAAA+AGG 0.429035 tig0021446:+103932 Msa1391750:CDS
TTGTGTTACTCAACCATCTT+CGG 0.429757 tig0021446:+102959 Msa1391750:CDS
AAAGAAGCGCCAAGAAGATC+TGG 0.434910 tig0021446:+104844 Msa1391750:CDS
GGCTTGGTGTTTATAATCGC+AGG 0.439814 tig0021446:-105053 None:intergenic
ATCATCATCAACACCTCCTT+CGG 0.442031 tig0021446:+102848 Msa1391750:CDS
TCCATCCAGTACACGTCGCT+TGG 0.442077 tig0021446:-104067 None:intergenic
AGTACCCAAGCGACGTGTAC+TGG 0.443147 tig0021446:+104062 Msa1391750:CDS
CGACCTTCAGGATCAGGAAT+AGG 0.445884 tig0021446:-102813 None:intergenic
TCAGGAATAGGCTGTGAATC+AGG 0.447013 tig0021446:-102801 None:intergenic
AGCGGCGCGATTAATAATAT+AGG 0.449054 tig0021446:+102485 Msa1391750:five_prime_UTR
CCACCTCGCGAGATGTGTGC+TGG 0.451336 tig0021446:+105608 Msa1391750:CDS
AAATCACGACCTTCAGGATC+AGG 0.453077 tig0021446:-102819 None:intergenic
CCTGGACAGCCTTGTAGCAT+TGG 0.453944 tig0021446:-105694 None:intergenic
ACTCTCTTGCTCTTACGAAC+AGG 0.456564 tig0021446:-104042 None:intergenic
CATTGCTGATACCATCAAAC+CGG 0.457258 tig0021446:-102737 None:intergenic
GCTGTCCAGGCGAAGACTAC+TGG 0.457917 tig0021446:+105707 Msa1391750:CDS
AGATATGTGATAGGTCCTAC+TGG 0.459612 tig0021446:+104996 Msa1391750:CDS
GTACAAATCCGTATAAATAC+CGG 0.462269 tig0021446:+105639 Msa1391750:CDS
CTTGCTCCTGCTAATTGGAA+AGG 0.463533 tig0021446:+103029 Msa1391750:CDS
CTAGAACCTTTCCAATTAGC+AGG 0.466538 tig0021446:-103035 None:intergenic
GGTGTCAAACTGAACTCAAC+TGG 0.467231 tig0021446:+102285 Msa1391750:five_prime_UTR
CGCAGGGATCCCCATTTCCT+CGG 0.468162 tig0021446:-105036 None:intergenic
TACTCACTTCTAGGTGGGGC+AGG 0.469584 tig0021446:-104498 None:intergenic
GGGGCAGCTTCAAGATGGAT+TGG 0.471719 tig0021446:+103139 Msa1391750:CDS
TTATAAACACCAAGCCCATC+AGG 0.472848 tig0021446:+105060 Msa1391750:CDS
GAAGTGGAATCAGGGTCTGC+TGG 0.477090 tig0021446:+104309 Msa1391750:CDS
GGAATCTGTTGATGTATTGA+TGG 0.477592 tig0021446:+104368 Msa1391750:CDS
TGAGGAATCTCTGTGATGAT+TGG 0.482112 tig0021446:-102449 None:intergenic
CCATCCAGTACACGTCGCTT+GGG 0.482402 tig0021446:-104066 None:intergenic
GAGTGAGAACAGGGTTAAGA+AGG 0.483255 tig0021446:+103163 Msa1391750:CDS
TTCGTGTATATCGTCTCCAC+AGG 0.485611 tig0021446:+105888 Msa1391750:three_prime_UTR
ATCATAGATAAACATATTGA+CGG 0.486183 tig0021446:-105799 None:intergenic
AAAAGGGGCGGATTTGGTGT+CGG 0.491074 tig0021446:+103949 Msa1391750:CDS
TTTCACCAGTAGTCTTCGCC+TGG 0.491636 tig0021446:-105712 None:intergenic
TCTAACAGTGCTTCAGGAAG+CGG 0.493879 tig0021446:+103236 Msa1391750:CDS
TGACTCTTACAACGCGTCAA+CGG 0.495079 tig0021446:+104406 Msa1391750:CDS
CCAATGCTACAAGGCTGTCC+AGG 0.496964 tig0021446:+105694 Msa1391750:CDS
GCAATGCTGTGAGGAGGAAG+AGG 0.500162 tig0021446:+102754 Msa1391750:CDS
AGCATCTTTGCCTGATTGAA+GGG 0.500386 tig0021446:-104430 None:intergenic
TCATCAAGGTCAGGCAAAGA+TGG 0.509231 tig0021446:+104234 Msa1391750:CDS
GCTTGAAGATACAGATTATG+AGG 0.510025 tig0021446:+104284 Msa1391750:CDS
TTATACGGATTTGTACATGA+TGG 0.510873 tig0021446:-105632 None:intergenic
GACAGCAGCTCCTCTTCTGT+AGG 0.513010 tig0021446:-104598 None:intergenic
AATGATGGTTATGATAATAC+TGG 0.513052 tig0021446:+102906 Msa1391750:CDS
AAATTTGAAGAAAATTATGA+AGG 0.513060 tig0021446:-102373 None:intergenic
AGCTTGATACCTGATGGGCT+TGG 0.515448 tig0021446:-105069 None:intergenic
ATGTATTGATGGACACTAAG+AGG 0.516625 tig0021446:+104379 Msa1391750:CDS
TGCCCCAAACTTGTACTCTC+AGG 0.517224 tig0021446:-103122 None:intergenic
CCTCAAAGGCCTTCCGTGGA+AGG 0.517260 tig0021446:+103921 Msa1391750:CDS
GAGACTGCAAAGAGGAACCT+TGG 0.517832 tig0021446:-105672 None:intergenic
TATGGTGCAACGCAATTATG+TGG 0.520643 tig0021446:-102423 None:intergenic
CCGCTTTAAGAGCATAATTG+AGG 0.520945 tig0021446:-102467 None:intergenic
TTATCAGCAGCTTCCTCCGA+AGG 0.522047 tig0021446:-102864 None:intergenic
TTTACGCCTAATGGCAGCCT+CGG 0.523022 tig0021446:-104629 None:intergenic
CTCCGTCCACTAGCCGAAGA+TGG 0.525607 tig0021446:-102972 None:intergenic
AATACCATCAGATATGTGAT+AGG 0.526976 tig0021446:+104987 Msa1391750:CDS
GCAAGTTGAGAAGGCTGCTA+GGG 0.527308 tig0021446:+104654 Msa1391750:CDS
GCGTAAAATGCAAGTTGAGA+AGG 0.527598 tig0021446:+104645 Msa1391750:CDS
CCTTAACGTGACAAATATTG+TGG 0.528998 tig0021446:-105934 None:intergenic
AGTTTGGGGCAGCTTCAAGA+TGG 0.531243 tig0021446:+103134 Msa1391750:CDS
TCCGTGGAAGGATTTCAAAA+GGG 0.531352 tig0021446:+103933 Msa1391750:CDS
GCTAAGAAGCGAGGCCTCAA+AGG 0.533528 tig0021446:+103907 Msa1391750:CDS
AATGCTGCCTCATCAAGGTC+AGG 0.537706 tig0021446:+104225 Msa1391750:CDS
CAATATACTCACTTCTAGGT+GGG 0.538644 tig0021446:-104503 None:intergenic
GTAATAGAAGCCAGCAATGG+AGG 0.539964 tig0021446:-105766 None:intergenic
AGGCCTCGCTTCTTAGCAGA+CGG 0.539987 tig0021446:-103901 None:intergenic
AAAAGAGAAGCCTACAGAAG+AGG 0.541543 tig0021446:+104588 Msa1391750:CDS
GCAGGGATCCCCATTTCCTC+GGG 0.542465 tig0021446:-105035 None:intergenic
GCACACATCTCGCGAGGTGG+AGG 0.545738 tig0021446:-105605 None:intergenic
TACAGATTATGAGGATGAAG+TGG 0.546851 tig0021446:+104293 Msa1391750:CDS
TGGATTGGGGAGTGAGAACA+GGG 0.547165 tig0021446:+103154 Msa1391750:CDS
TACTTGGTCAAGATTCTAGC+AGG 0.548008 tig0021446:+104801 Msa1391750:CDS
TTGCAGTCTCCAATGCTACA+AGG 0.548799 tig0021446:+105685 Msa1391750:CDS
GGGGCAGGAGGTAATCCATT+GGG 0.549140 tig0021446:-104483 None:intergenic
AATAATAGACGGAGCAGTGA+AGG 0.554175 tig0021446:+103002 Msa1391750:CDS
AACTGGTCGGAAAACAGAAA+CGG 0.556431 tig0021446:+102302 Msa1391750:five_prime_UTR
TGACAAATGACAACATCAGC+TGG 0.558226 tig0021446:-105738 None:intergenic
AAGAAGGTTAAACTCAAGGT+TGG 0.559367 tig0021446:+103179 Msa1391750:CDS
GGGAAGGAAGAGACGTCGAT+GGG 0.560352 tig0021446:+103970 Msa1391750:CDS
TGCAAGTTGAGAAGGCTGCT+AGG 0.561618 tig0021446:+104653 Msa1391750:CDS
GGTTAAGAAGGTTAAACTCA+AGG 0.564843 tig0021446:+103175 Msa1391750:CDS
AGTTTAATCGAGTTTCCCAA+TGG 0.564889 tig0021446:+104468 Msa1391750:CDS
AAGGTTAAACTCAAGGTTGG+TGG 0.565439 tig0021446:+103182 Msa1391750:CDS
ATGCTGATATATTTGGTGGA+AGG 0.565650 tig0021446:+103096 Msa1391750:CDS
AGAGGAGCCAACCATCGCGC+AGG 0.566100 tig0021446:+102772 Msa1391750:CDS
GGGCGGATTTGGTGTCGGGA+AGG 0.568133 tig0021446:+103954 Msa1391750:CDS
AAGAACACATCTAGCAAGCA+AGG 0.568724 tig0021446:+104006 Msa1391750:CDS
GTTTCTAGTGATGAGAATGA+TGG 0.569956 tig0021446:+102891 Msa1391750:CDS
ATCTTTGCCTGACCTTGATG+AGG 0.571415 tig0021446:-104232 None:intergenic
ATGAGGATGAAGTGGAATCA+GGG 0.574164 tig0021446:+104301 Msa1391750:CDS
AGAAAACCGAGGCTGCCATT+AGG 0.578455 tig0021446:+104623 Msa1391750:CDS
ACTCAACCATCTTCGGCTAG+TGG 0.578820 tig0021446:+102966 Msa1391750:CDS
AGGATAGCTTGATACCTGAT+GGG 0.578873 tig0021446:-105074 None:intergenic
TGGACAATGCTGCCTCATCA+AGG 0.579403 tig0021446:+104220 Msa1391750:CDS
CCCAAGCGACGTGTACTGGA+TGG 0.579720 tig0021446:+104066 Msa1391750:CDS
GGCAGCTTCAAGATGGATTG+GGG 0.581310 tig0021446:+103141 Msa1391750:CDS
CCGTGGAAGGATTTCAAAAG+GGG 0.581364 tig0021446:+103934 Msa1391750:CDS
AAAAGCTCTCGTTTATCGGA+CGG 0.583457 tig0021446:+103269 Msa1391750:CDS
CGGGAAGGAAGAGACGTCGA+TGG 0.584552 tig0021446:+103969 Msa1391750:CDS
ATAGGCTGTGAATCAGGCCG+TGG 0.585794 tig0021446:-102795 None:intergenic
ATGATGCTGATGATGAGATT+CGG 0.588715 tig0021446:+104100 Msa1391750:CDS
AGGACCTATCACATATCTGA+TGG 0.590688 tig0021446:-104991 None:intergenic
GAGATGAAGAAGAATCAAGC+AGG 0.591792 tig0021446:+104166 Msa1391750:CDS
AGGGTCTGCTGGAGAGCAAG+AGG 0.591977 tig0021446:+104320 Msa1391750:CDS
AACCATCTTCGGCTAGTGGA+CGG 0.593376 tig0021446:+102970 Msa1391750:CDS
TAGGCTAGAGCAATTACTGA+AGG 0.593639 tig0021446:+105833 Msa1391750:three_prime_UTR
GTATATCGTCTCCACAGGGA+TGG 0.596848 tig0021446:+105893 Msa1391750:three_prime_UTR
TGGGGCAGGAGGTAATCCAT+TGG 0.599381 tig0021446:-104484 None:intergenic
CAGCCTATTCCTGATCCTGA+AGG 0.600249 tig0021446:+102810 Msa1391750:CDS
CCTCAATTATGCTCTTAAAG+CGG 0.602289 tig0021446:+102467 Msa1391750:five_prime_UTR
TGGAAGGATTTCAAAAGGGG+CGG 0.606104 tig0021446:+103937 Msa1391750:CDS
TGTATTGATGGACACTAAGA+GGG 0.606879 tig0021446:+104380 Msa1391750:CDS
GCGCCAAGAAGATCTGGCAC+AGG 0.611439 tig0021446:+104850 Msa1391750:CDS
GAAGGCTGCTAGGGAATCTG+AGG 0.612819 tig0021446:+104663 Msa1391750:CDS
TCAGCAGCTTCCTCCGAAGG+AGG 0.613860 tig0021446:-102861 None:intergenic
TACAAATCCGTATAAATACC+GGG 0.613891 tig0021446:+105640 Msa1391750:CDS
ATCATCAACACCTCCTTCGG+AGG 0.618324 tig0021446:+102851 Msa1391750:CDS
GGAGTAGTTTAAATAATAGA+CGG 0.619459 tig0021446:+102991 Msa1391750:CDS
TGGAAGATTTAGGATCTACC+CGG 0.621580 tig0021446:+102718 Msa1391750:CDS
GAGGCCTCAAAGGCCTTCCG+TGG 0.622312 tig0021446:+103917 Msa1391750:CDS
AATATACTCACTTCTAGGTG+GGG 0.622996 tig0021446:-104502 None:intergenic
GAAGGAGGTGTTGATGATGA+TGG 0.623293 tig0021446:-102846 None:intergenic
GCTTGGTGTTTATAATCGCA+GGG 0.625642 tig0021446:-105052 None:intergenic
TAAGTAATAGAAGCCAGCAA+TGG 0.626262 tig0021446:-105769 None:intergenic
ACAATATACTCACTTCTAGG+TGG 0.626612 tig0021446:-104504 None:intergenic
GATATGTGATAGGTCCTACT+GGG 0.638043 tig0021446:+104997 Msa1391750:CDS
TCACTTCTAGGTGGGGCAGG+AGG 0.639183 tig0021446:-104495 None:intergenic
TCAAACTGAACTCAACTGGT+CGG 0.642265 tig0021446:+102289 Msa1391750:five_prime_UTR
GATAGGTCCTACTGGGACAG+TGG 0.650564 tig0021446:+105004 Msa1391750:CDS
TCTCCGTCTGCTAAGAAGCG+AGG 0.650811 tig0021446:+103898 Msa1391750:CDS
AAAGTCACCACTGTCCCAGT+AGG 0.661585 tig0021446:-105011 None:intergenic
ATTGCTGATACCATCAAACC+GGG 0.666876 tig0021446:-102736 None:intergenic
GTATCAGCAATGCTGTGAGG+AGG 0.670655 tig0021446:+102748 Msa1391750:CDS
TCGTGTATATCGTCTCCACA+GGG 0.672837 tig0021446:+105889 Msa1391750:three_prime_UTR
GGAAGGAAGAGACGTCGATG+GGG 0.684156 tig0021446:+103971 Msa1391750:CDS
ATCCTGAGAGTACAAGTTTG+GGG 0.689240 tig0021446:+103120 Msa1391750:CDS
TAGCATTGGAGACTGCAAAG+AGG 0.704536 tig0021446:-105680 None:intergenic
AAGATGGTTGAGTAACACAA+TGG 0.709439 tig0021446:-102956 None:intergenic
GCTGCTGTCAAAGAAAACCG+AGG 0.714689 tig0021446:+104612 Msa1391750:CDS
TAAGTGATACACCATCCCTG+TGG 0.750311 tig0021446:-105904 None:intergenic
ATGGTATCAGCAATGCTGTG+AGG 0.773928 tig0021446:+102745 Msa1391750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGAAGAAAATTATGA+AGG - tig0021446:102376-102395 None:intergenic 15.0%
!!! AGAATTTGATTTTTATGTAA+AGG + tig0021446:102657-102676 Msa1391750:five_prime_UTR 15.0%
!! ATATATCATTTATGGTTATT+CGG + tig0021446:103347-103366 Msa1391750:intron 15.0%
!!! GTATTTAGATTTTACTTTTA+TGG + tig0021446:103746-103765 Msa1391750:intron 15.0%
!! TTATAAGTTAAAAAGGATAA+AGG - tig0021446:103818-103837 None:intergenic 15.0%
!!! GCAAAAAAATAAGTTTTTGA+TGG + tig0021446:102698-102717 Msa1391750:exon 20.0%
!! TATCGCTTATATATCATTTA+TGG + tig0021446:103339-103358 Msa1391750:intron 20.0%
!! AAATCTATGATAACTTATCA+AGG - tig0021446:103438-103457 None:intergenic 20.0%
!!! CTTTTATGGAAAAATATTTG+CGG + tig0021446:103760-103779 Msa1391750:intron 20.0%
!!! ATGGGTTTTATAAGTTAAAA+AGG - tig0021446:103825-103844 None:intergenic 20.0%
!!! TCCATTTAAATTCATTTTCT+AGG + tig0021446:104760-104779 Msa1391750:intron 20.0%
!! AATAATTGTTGTGAAAATCA+TGG - tig0021446:105255-105274 None:intergenic 20.0%
!!! ATGATTTTCACAACAATTAT+TGG + tig0021446:105254-105273 Msa1391750:intron 20.0%
!!! TGATTTTCACAACAATTATT+GGG + tig0021446:105255-105274 Msa1391750:intron 20.0%
!! TTTCGCAAATAAAATAAGAA+GGG + tig0021446:105371-105390 Msa1391750:intron 20.0%
!! ATCATAGATAAACATATTGA+CGG - tig0021446:105802-105821 None:intergenic 20.0%
!! ATGTTTATCTATGATAATAC+AGG + tig0021446:105807-105826 Msa1391750:three_prime_UTR 20.0%
! AAAATTATGAAGGAAAAACC+TGG - tig0021446:102366-102385 None:intergenic 25.0%
!!! TTTTTTTTCTTCATTAGCAG+CGG + tig0021446:102530-102549 Msa1391750:five_prime_UTR 25.0%
!! AAGTTTTTGATGGAAGATTT+AGG + tig0021446:102708-102727 Msa1391750:exon 25.0%
! AATGATGGTTATGATAATAC+TGG + tig0021446:102906-102925 Msa1391750:CDS 25.0%
!! GAGATTAAATTCTTTTCTCT+TGG - tig0021446:102934-102953 None:intergenic 25.0%
! GGAGTAGTTTAAATAATAGA+CGG + tig0021446:102991-103010 Msa1391750:CDS 25.0%
! TCGAAAAATGCTGATATATT+TGG + tig0021446:103089-103108 Msa1391750:CDS 25.0%
! AAAAATGCTGATATATTTGG+TGG + tig0021446:103092-103111 Msa1391750:CDS 25.0%
! TTTAGGTGAAAACACTTAAA+CGG - tig0021446:103391-103410 None:intergenic 25.0%
! ATAAGAAAAAGAAAAAGCAG+AGG + tig0021446:104343-104362 Msa1391750:CDS 25.0%
!! TTTTGTTCTCTCTAAATTAC+AGG + tig0021446:104691-104710 Msa1391750:intron 25.0%
! GCCTAGAAAATGAATTTAAA+TGG - tig0021446:104764-104783 None:intergenic 25.0%
! TTTATAAAACTGTTCTTTGC+AGG + tig0021446:104932-104951 Msa1391750:intron 25.0%
! GTTTCGCAAATAAAATAAGA+AGG + tig0021446:105370-105389 Msa1391750:intron 25.0%
! CAAATAAAATAAGAAGGGAA+AGG + tig0021446:105376-105395 Msa1391750:intron 25.0%
!!! GAAAAACCTGGAGAATTTTT+TGG - tig0021446:102354-102373 None:intergenic 30.0%
CACCTAAAAGTTTACACTTT+AGG + tig0021446:103403-103422 Msa1391750:intron 30.0%
! CTCCTAAAGTGTAAACTTTT+AGG - tig0021446:103408-103427 None:intergenic 30.0%
! AGTTTACACTTTAGGAGATT+TGG + tig0021446:103411-103430 Msa1391750:intron 30.0%
TAAGCAACACTATATAGAGT+GGG + tig0021446:103480-103499 Msa1391750:intron 30.0%
TTTGTTTCACGAGAATATTG+AGG + tig0021446:103688-103707 Msa1391750:intron 30.0%
TTTGATCAACACGATCAAAT+GGG - tig0021446:103843-103862 None:intergenic 30.0%
ATTTGATCAACACGATCAAA+TGG - tig0021446:103844-103863 None:intergenic 30.0%
AGTACAATATACTCACTTCT+AGG - tig0021446:104510-104529 None:intergenic 30.0%
AAATCCAACGAACATAATGA+GGG - tig0021446:104724-104743 None:intergenic 30.0%
AAAATCCAACGAACATAATG+AGG - tig0021446:104725-104744 None:intergenic 30.0%
GAAGCTATCAGAAAAATACT+TGG + tig0021446:104785-104804 Msa1391750:CDS 30.0%
AATACCATCAGATATGTGAT+AGG + tig0021446:104987-105006 Msa1391750:CDS 30.0%
ACATACATAAACAAGTTACC+AGG - tig0021446:105132-105151 None:intergenic 30.0%
!! GGTAACTTGTTTATGTATGT+TGG + tig0021446:105132-105151 Msa1391750:intron 30.0%
TTTATGTATGTTGGCAAACT+TGG + tig0021446:105141-105160 Msa1391750:intron 30.0%
GCAAACTTGGAGAAAAAAAA+TGG + tig0021446:105154-105173 Msa1391750:intron 30.0%
ATGGAAACAACTAAAACCAA+AGG - tig0021446:105236-105255 None:intergenic 30.0%
ACATAACAAAAAGAATCCTC+AGG - tig0021446:105352-105371 None:intergenic 30.0%
ATCATAATCAGTCTTCATCA+TGG - tig0021446:105490-105509 None:intergenic 30.0%
TTATACGGATTTGTACATGA+TGG - tig0021446:105635-105654 None:intergenic 30.0%
GTACAAATCCGTATAAATAC+CGG + tig0021446:105639-105658 Msa1391750:CDS 30.0%
TACAAATCCGTATAAATACC+GGG + tig0021446:105640-105659 Msa1391750:CDS 30.0%
TTTGAATCCCGGTATTTATA+CGG - tig0021446:105650-105669 None:intergenic 30.0%
TCTATGATAATACAGGCTTT+AGG + tig0021446:105814-105833 Msa1391750:three_prime_UTR 30.0%
!!! AATTTTTTGGCAGTTTGTGG+CGG - tig0021446:102341-102360 None:intergenic 35.0%
!!! GAGAATTTTTTGGCAGTTTG+TGG - tig0021446:102344-102363 None:intergenic 35.0%
AAACTGCCAAAAAATTCTCC+AGG + tig0021446:102345-102364 Msa1391750:five_prime_UTR 35.0%
CTCTGTGATGATTGGATATA+TGG - tig0021446:102444-102463 None:intergenic 35.0%
CCTCAATTATGCTCTTAAAG+CGG + tig0021446:102467-102486 Msa1391750:five_prime_UTR 35.0%
!! GTTTCTAGTGATGAGAATGA+TGG + tig0021446:102891-102910 Msa1391750:CDS 35.0%
AAGATGGTTGAGTAACACAA+TGG - tig0021446:102959-102978 None:intergenic 35.0%
! TTGTGTTACTCAACCATCTT+CGG + tig0021446:102959-102978 Msa1391750:CDS 35.0%
! ATGCTGATATATTTGGTGGA+AGG + tig0021446:103096-103115 Msa1391750:CDS 35.0%
! AATCCTGAGAGTACAAGTTT+GGG + tig0021446:103119-103138 Msa1391750:CDS 35.0%
GGTTAAGAAGGTTAAACTCA+AGG + tig0021446:103175-103194 Msa1391750:CDS 35.0%
AAGAAGGTTAAACTCAAGGT+TGG + tig0021446:103179-103198 Msa1391750:CDS 35.0%
TTCGAAAAGCTCTCGTTTAT+CGG + tig0021446:103265-103284 Msa1391750:CDS 35.0%
!!! ACAGAATTACCTGTTGCTTT+TGG - tig0021446:103307-103326 None:intergenic 35.0%
GTAAGCAACACTATATAGAG+TGG + tig0021446:103479-103498 Msa1391750:intron 35.0%
CAAAAGTTATTTGGGCTTGA+AGG - tig0021446:103524-103543 None:intergenic 35.0%
CCCTCATGCAAAAGTTATTT+GGG - tig0021446:103532-103551 None:intergenic 35.0%
! CCCAAATAACTTTTGCATGA+GGG + tig0021446:103529-103548 Msa1391750:intron 35.0%
! CCAAATAACTTTTGCATGAG+GGG + tig0021446:103530-103549 Msa1391750:intron 35.0%
! CAAATAACTTTTGCATGAGG+GGG + tig0021446:103531-103550 Msa1391750:intron 35.0%
! AAATAACTTTTGCATGAGGG+GGG + tig0021446:103532-103551 Msa1391750:intron 35.0%
TCGATGCATATTATGGACAT+TGG + tig0021446:103601-103620 Msa1391750:intron 35.0%
TCAAAACGCCAAATATCGTA+CGG - tig0021446:103627-103646 None:intergenic 35.0%
CTTGCTAGATGTGTTCTTTA+TGG - tig0021446:104004-104023 None:intergenic 35.0%
! ATGATGCTGATGATGAGATT+CGG + tig0021446:104100-104119 Msa1391750:CDS 35.0%
GCTTGAAGATACAGATTATG+AGG + tig0021446:104284-104303 Msa1391750:CDS 35.0%
TACAGATTATGAGGATGAAG+TGG + tig0021446:104293-104312 Msa1391750:CDS 35.0%
GAAAAAGAAAAAGCAGAGGA+AGG + tig0021446:104347-104366 Msa1391750:CDS 35.0%
GGAATCTGTTGATGTATTGA+TGG + tig0021446:104368-104387 Msa1391750:CDS 35.0%
! ATGTATTGATGGACACTAAG+AGG + tig0021446:104379-104398 Msa1391750:CDS 35.0%
! TGTATTGATGGACACTAAGA+GGG + tig0021446:104380-104399 Msa1391750:CDS 35.0%
AGTTTAATCGAGTTTCCCAA+TGG + tig0021446:104468-104487 Msa1391750:CDS 35.0%
AATATACTCACTTCTAGGTG+GGG - tig0021446:104505-104524 None:intergenic 35.0%
CAATATACTCACTTCTAGGT+GGG - tig0021446:104506-104525 None:intergenic 35.0%
ACAATATACTCACTTCTAGG+TGG - tig0021446:104507-104526 None:intergenic 35.0%
! AACTTGCATTTTACGCCTAA+TGG - tig0021446:104641-104660 None:intergenic 35.0%
AATCCAACGAACATAATGAG+GGG - tig0021446:104723-104742 None:intergenic 35.0%
! ATGTTCGTTGGATTTTACAC+TGG + tig0021446:104729-104748 Msa1391750:intron 35.0%
TACCAGGAAGATAGTTTAAC+AGG - tig0021446:105116-105135 None:intergenic 35.0%
CGCATTGCTAATTTGATGTA+TGG + tig0021446:105308-105327 Msa1391750:intron 35.0%
! ACTCATGTTGCAAGTTTGTT+TGG + tig0021446:105522-105541 Msa1391750:intron 35.0%
ACTGATATCATTAGCAGAGA+AGG - tig0021446:105567-105586 None:intergenic 35.0%
TAAGTAATAGAAGCCAGCAA+TGG - tig0021446:105772-105791 None:intergenic 35.0%
CCTTAACGTGACAAATATTG+TGG - tig0021446:105937-105956 None:intergenic 35.0%
CCACAATATTTGTCACGTTA+AGG + tig0021446:105934-105953 Msa1391750:three_prime_UTR 35.0%
TCAAACTGAACTCAACTGGT+CGG + tig0021446:102289-102308 Msa1391750:five_prime_UTR 40.0%
AACTGGTCGGAAAACAGAAA+CGG + tig0021446:102302-102321 Msa1391750:five_prime_UTR 40.0%
TATGGTGCAACGCAATTATG+TGG - tig0021446:102426-102445 None:intergenic 40.0%
TGAGGAATCTCTGTGATGAT+TGG - tig0021446:102452-102471 None:intergenic 40.0%
!! CCGCTTTAAGAGCATAATTG+AGG - tig0021446:102470-102489 None:intergenic 40.0%
AGCGGCGCGATTAATAATAT+AGG + tig0021446:102485-102504 Msa1391750:five_prime_UTR 40.0%
! TGGAAGATTTAGGATCTACC+CGG + tig0021446:102718-102737 Msa1391750:CDS 40.0%
ATTGCTGATACCATCAAACC+GGG - tig0021446:102739-102758 None:intergenic 40.0%
CATTGCTGATACCATCAAAC+CGG - tig0021446:102740-102759 None:intergenic 40.0%
ATCATCATCAACACCTCCTT+CGG + tig0021446:102848-102867 Msa1391750:CDS 40.0%
AATAATAGACGGAGCAGTGA+AGG + tig0021446:103002-103021 Msa1391750:CDS 40.0%
CTAGAACCTTTCCAATTAGC+AGG - tig0021446:103038-103057 None:intergenic 40.0%
! GAATCCTGAGAGTACAAGTT+TGG + tig0021446:103118-103137 Msa1391750:CDS 40.0%
! ATCCTGAGAGTACAAGTTTG+GGG + tig0021446:103120-103139 Msa1391750:CDS 40.0%
AAGGTTAAACTCAAGGTTGG+TGG + tig0021446:103182-103201 Msa1391750:CDS 40.0%
AAAAGCTCTCGTTTATCGGA+CGG + tig0021446:103269-103288 Msa1391750:CDS 40.0%
GAAGGATACGATCAATGTTC+AGG - tig0021446:103506-103525 None:intergenic 40.0%
! GCCCAAATAACTTTTGCATG+AGG + tig0021446:103528-103547 Msa1391750:intron 40.0%
CCCCTCATGCAAAAGTTATT+TGG - tig0021446:103533-103552 None:intergenic 40.0%
! CAGTTGGCTAAACTTTTAGG+CGG - tig0021446:103581-103600 None:intergenic 40.0%
! CGACAGTTGGCTAAACTTTT+AGG - tig0021446:103584-103603 None:intergenic 40.0%
! CCATAATATGCATCGACAGT+TGG - tig0021446:103597-103616 None:intergenic 40.0%
CCAACTGTCGATGCATATTA+TGG + tig0021446:103594-103613 Msa1391750:intron 40.0%
ATGTGTCTGCAAGCATTCTA+GGG + tig0021446:103724-103743 Msa1391750:intron 40.0%
!!! TTTTGAAATCCTTCCACGGA+AGG - tig0021446:103933-103952 None:intergenic 40.0%
TTCCGTGGAAGGATTTCAAA+AGG + tig0021446:103932-103951 Msa1391750:CDS 40.0%
TCCGTGGAAGGATTTCAAAA+GGG + tig0021446:103933-103952 Msa1391750:CDS 40.0%
AAGAACACATCTAGCAAGCA+AGG + tig0021446:104006-104025 Msa1391750:CDS 40.0%
GAGATGAAGAAGAATCAAGC+AGG + tig0021446:104166-104185 Msa1391750:CDS 40.0%
ACTCTCTAGCGTCTCTAATA+TGG + tig0021446:104200-104219 Msa1391750:CDS 40.0%
TATGAGGATGAAGTGGAATC+AGG + tig0021446:104300-104319 Msa1391750:CDS 40.0%
ATGAGGATGAAGTGGAATCA+GGG + tig0021446:104301-104320 Msa1391750:CDS 40.0%
AGCATCTTTGCCTGATTGAA+GGG - tig0021446:104433-104452 None:intergenic 40.0%
AAGCATCTTTGCCTGATTGA+AGG - tig0021446:104434-104453 None:intergenic 40.0%
AAAAGAGAAGCCTACAGAAG+AGG + tig0021446:104588-104607 Msa1391750:CDS 40.0%
! GCGTAAAATGCAAGTTGAGA+AGG + tig0021446:104645-104664 Msa1391750:CDS 40.0%
ATCCAACGAACATAATGAGG+GGG - tig0021446:104722-104741 None:intergenic 40.0%
TACTTGGTCAAGATTCTAGC+AGG + tig0021446:104801-104820 Msa1391750:CDS 40.0%
AAACTGTTCTTTGCAGGAGA+AGG + tig0021446:104938-104957 Msa1391750:intron 40.0%
AGGACCTATCACATATCTGA+TGG - tig0021446:104994-105013 None:intergenic 40.0%
AGATATGTGATAGGTCCTAC+TGG + tig0021446:104996-105015 Msa1391750:CDS 40.0%
GATATGTGATAGGTCCTACT+GGG + tig0021446:104997-105016 Msa1391750:CDS 40.0%
!! GCTTGGTGTTTATAATCGCA+GGG - tig0021446:105055-105074 None:intergenic 40.0%
TTATAAACACCAAGCCCATC+AGG + tig0021446:105060-105079 Msa1391750:CDS 40.0%
AGGATAGCTTGATACCTGAT+GGG - tig0021446:105077-105096 None:intergenic 40.0%
TAGGATAGCTTGATACCTGA+TGG - tig0021446:105078-105097 None:intergenic 40.0%
CAGGTCACATGCATCAAATT+AGG - tig0021446:105097-105116 None:intergenic 40.0%
GACCTGTTAAACTATCTTCC+TGG + tig0021446:105111-105130 Msa1391750:intron 40.0%
!! TTAAAGCAAAGGCACTCACT+CGG - tig0021446:105449-105468 None:intergenic 40.0%
CGAGGAAACAGTTAAAGCAA+AGG - tig0021446:105460-105479 None:intergenic 40.0%
CTTCATCATGGTCAAAATCG+AGG - tig0021446:105478-105497 None:intergenic 40.0%
ATACCGGGATTCAAAAACCA+AGG + tig0021446:105655-105674 Msa1391750:CDS 40.0%
!! GAACCTTGGTTTTTGAATCC+CGG - tig0021446:105661-105680 None:intergenic 40.0%
TGACAAATGACAACATCAGC+TGG - tig0021446:105741-105760 None:intergenic 40.0%
TAGGCTAGAGCAATTACTGA+AGG + tig0021446:105833-105852 Msa1391750:three_prime_UTR 40.0%
GGTGTCAAACTGAACTCAAC+TGG + tig0021446:102285-102304 Msa1391750:five_prime_UTR 45.0%
! TTAGGATCTACCCGGTTTGA+TGG + tig0021446:102726-102745 Msa1391750:CDS 45.0%
ATGGTATCAGCAATGCTGTG+AGG + tig0021446:102745-102764 Msa1391750:CDS 45.0%
TCAGGAATAGGCTGTGAATC+AGG - tig0021446:102804-102823 None:intergenic 45.0%
AAATCACGACCTTCAGGATC+AGG - tig0021446:102822-102841 None:intergenic 45.0%
!! GAAGGAGGTGTTGATGATGA+TGG - tig0021446:102849-102868 None:intergenic 45.0%
GTGTTCTTGCTCCTGCTAAT+TGG + tig0021446:103024-103043 Msa1391750:CDS 45.0%
CTTGCTCCTGCTAATTGGAA+AGG + tig0021446:103029-103048 Msa1391750:CDS 45.0%
GAGTGAGAACAGGGTTAAGA+AGG + tig0021446:103163-103182 Msa1391750:CDS 45.0%
TCTGCATCTAACAGTGCTTC+AGG + tig0021446:103230-103249 Msa1391750:CDS 45.0%
TCTAACAGTGCTTCAGGAAG+CGG + tig0021446:103236-103255 Msa1391750:CDS 45.0%
!!! ATTACCTGTTGCTTTTGGCG+CGG - tig0021446:103302-103321 None:intergenic 45.0%
! TTGGCTAAACTTTTAGGCGG+AGG - tig0021446:103578-103597 None:intergenic 45.0%
GACATTGGCCGTACGATATT+TGG + tig0021446:103616-103635 Msa1391750:intron 45.0%
GATGTGTCTGCAAGCATTCT+AGG + tig0021446:103723-103742 Msa1391750:intron 45.0%
!!! CCCCTTTTGAAATCCTTCCA+CGG - tig0021446:103937-103956 None:intergenic 45.0%
CCGTGGAAGGATTTCAAAAG+GGG + tig0021446:103934-103953 Msa1391750:CDS 45.0%
TGGAAGGATTTCAAAAGGGG+CGG + tig0021446:103937-103956 Msa1391750:CDS 45.0%
! GATTTCAAAAGGGGCGGATT+TGG + tig0021446:103943-103962 Msa1391750:CDS 45.0%
ACTCTCTTGCTCTTACGAAC+AGG - tig0021446:104045-104064 None:intergenic 45.0%
ATCTTTGCCTGACCTTGATG+AGG - tig0021446:104235-104254 None:intergenic 45.0%
TCATCAAGGTCAGGCAAAGA+TGG + tig0021446:104234-104253 Msa1391750:CDS 45.0%
TGACTCTTACAACGCGTCAA+CGG + tig0021446:104406-104425 Msa1391750:CDS 45.0%
TTCCCCCTCATTATGTTCGT+TGG + tig0021446:104717-104736 Msa1391750:intron 45.0%
TTCTAGCAGGAAAAAGCGAG+AGG + tig0021446:104814-104833 Msa1391750:CDS 45.0%
!! AAAGAAGCGCCAAGAAGATC+TGG + tig0021446:104844-104863 Msa1391750:CDS 45.0%
AAACCTGTGCCAGATCTTCT+TGG - tig0021446:104856-104875 None:intergenic 45.0%
AAGAAGATCTGGCACAGGTT+TGG + tig0021446:104855-104874 Msa1391750:intron 45.0%
TGATGCATGCTTCTCTGCTT+CGG - tig0021446:104967-104986 None:intergenic 45.0%
! GTGACTTTTCCCGAGGAAAT+GGG + tig0021446:105026-105045 Msa1391750:CDS 45.0%
! TGACTTTTCCCGAGGAAATG+GGG + tig0021446:105027-105046 Msa1391750:CDS 45.0%
!! GGCTTGGTGTTTATAATCGC+AGG - tig0021446:105056-105075 None:intergenic 45.0%
CAAATCTCTGTGTTCGCCTT+TGG + tig0021446:105217-105236 Msa1391750:intron 45.0%
CCTCAGGAAGATAGACAAAC+AGG - tig0021446:105336-105355 None:intergenic 45.0%
CCTGTTTGTCTATCTTCCTG+AGG + tig0021446:105333-105352 Msa1391750:intron 45.0%
! TAGCATTGGAGACTGCAAAG+AGG - tig0021446:105683-105702 None:intergenic 45.0%
TTGCAGTCTCCAATGCTACA+AGG + tig0021446:105685-105704 Msa1391750:CDS 45.0%
TGTCAATAGTCCTCCATTGC+TGG + tig0021446:105756-105775 Msa1391750:three_prime_UTR 45.0%
GTAATAGAAGCCAGCAATGG+AGG - tig0021446:105769-105788 None:intergenic 45.0%
TTCGTGTATATCGTCTCCAC+AGG + tig0021446:105888-105907 Msa1391750:three_prime_UTR 45.0%
TCGTGTATATCGTCTCCACA+GGG + tig0021446:105889-105908 Msa1391750:three_prime_UTR 45.0%
TAAGTGATACACCATCCCTG+TGG - tig0021446:105907-105926 None:intergenic 45.0%
GTATCAGCAATGCTGTGAGG+AGG + tig0021446:102748-102767 Msa1391750:CDS 50.0%
CAGCCTATTCCTGATCCTGA+AGG + tig0021446:102810-102829 Msa1391750:CDS 50.0%
CGACCTTCAGGATCAGGAAT+AGG - tig0021446:102816-102835 None:intergenic 50.0%
GGCGAAAAATCACGACCTTC+AGG - tig0021446:102828-102847 None:intergenic 50.0%
ATCATCAACACCTCCTTCGG+AGG + tig0021446:102851-102870 Msa1391750:CDS 50.0%
TTATCAGCAGCTTCCTCCGA+AGG - tig0021446:102867-102886 None:intergenic 50.0%
ACTCAACCATCTTCGGCTAG+TGG + tig0021446:102966-102985 Msa1391750:CDS 50.0%
AACCATCTTCGGCTAGTGGA+CGG + tig0021446:102970-102989 Msa1391750:CDS 50.0%
TGCCCCAAACTTGTACTCTC+AGG - tig0021446:103125-103144 None:intergenic 50.0%
! AGTTTGGGGCAGCTTCAAGA+TGG + tig0021446:103134-103153 Msa1391750:CDS 50.0%
! GGGCAGCTTCAAGATGGATT+GGG + tig0021446:103140-103159 Msa1391750:CDS 50.0%
!! GGCAGCTTCAAGATGGATTG+GGG + tig0021446:103141-103160 Msa1391750:CDS 50.0%
!! ATGGATTGGGGAGTGAGAAC+AGG + tig0021446:103153-103172 Msa1391750:CDS 50.0%
! TGGATTGGGGAGTGAGAACA+GGG + tig0021446:103154-103173 Msa1391750:CDS 50.0%
!! AAAAGGGGCGGATTTGGTGT+CGG + tig0021446:103949-103968 Msa1391750:CDS 50.0%
TGGACAATGCTGCCTCATCA+AGG + tig0021446:104220-104239 Msa1391750:CDS 50.0%
AATGCTGCCTCATCAAGGTC+AGG + tig0021446:104225-104244 Msa1391750:CDS 50.0%
GACTCTTACAACGCGTCAAC+GGG + tig0021446:104407-104426 Msa1391750:CDS 50.0%
GCTGCTGTCAAAGAAAACCG+AGG + tig0021446:104612-104631 Msa1391750:CDS 50.0%
AGAAAACCGAGGCTGCCATT+AGG + tig0021446:104623-104642 Msa1391750:CDS 50.0%
TTTACGCCTAATGGCAGCCT+CGG - tig0021446:104632-104651 None:intergenic 50.0%
! TGCAAGTTGAGAAGGCTGCT+AGG + tig0021446:104653-104672 Msa1391750:CDS 50.0%
! GCAAGTTGAGAAGGCTGCTA+GGG + tig0021446:104654-104673 Msa1391750:CDS 50.0%
AAAGTCACCACTGTCCCAGT+AGG - tig0021446:105014-105033 None:intergenic 50.0%
! GGTGACTTTTCCCGAGGAAA+TGG + tig0021446:105025-105044 Msa1391750:CDS 50.0%
!! AGCTTGATACCTGATGGGCT+TGG - tig0021446:105072-105091 None:intergenic 50.0%
GAGACTGCAAAGAGGAACCT+TGG - tig0021446:105675-105694 None:intergenic 50.0%
TTTCACCAGTAGTCTTCGCC+TGG - tig0021446:105715-105734 None:intergenic 50.0%
GTATATCGTCTCCACAGGGA+TGG + tig0021446:105893-105912 Msa1391750:three_prime_UTR 50.0%
TGGCAGTTTGTGGCGGTTGA+CGG - tig0021446:102334-102353 None:intergenic 55.0%
GCAATGCTGTGAGGAGGAAG+AGG + tig0021446:102754-102773 Msa1391750:CDS 55.0%
ATAGGCTGTGAATCAGGCCG+TGG - tig0021446:102798-102817 None:intergenic 55.0%
GGGGCAGCTTCAAGATGGAT+TGG + tig0021446:103139-103158 Msa1391750:CDS 55.0%
TCTCCGTCTGCTAAGAAGCG+AGG + tig0021446:103898-103917 Msa1391750:CDS 55.0%
AGGCCTCGCTTCTTAGCAGA+CGG - tig0021446:103904-103923 None:intergenic 55.0%
GCTAAGAAGCGAGGCCTCAA+AGG + tig0021446:103907-103926 Msa1391750:CDS 55.0%
!! AAAGGGGCGGATTTGGTGTC+GGG + tig0021446:103950-103969 Msa1391750:CDS 55.0%
GGGAAGGAAGAGACGTCGAT+GGG + tig0021446:103970-103989 Msa1391750:CDS 55.0%
GGAAGGAAGAGACGTCGATG+GGG + tig0021446:103971-103990 Msa1391750:CDS 55.0%
AGTACCCAAGCGACGTGTAC+TGG + tig0021446:104062-104081 Msa1391750:CDS 55.0%
CCATCCAGTACACGTCGCTT+GGG - tig0021446:104069-104088 None:intergenic 55.0%
TCCATCCAGTACACGTCGCT+TGG - tig0021446:104070-104089 None:intergenic 55.0%
GAAGTGGAATCAGGGTCTGC+TGG + tig0021446:104309-104328 Msa1391750:CDS 55.0%
GGGGCAGGAGGTAATCCATT+GGG - tig0021446:104486-104505 None:intergenic 55.0%
TGGGGCAGGAGGTAATCCAT+TGG - tig0021446:104487-104506 None:intergenic 55.0%
TACTCACTTCTAGGTGGGGC+AGG - tig0021446:104501-104520 None:intergenic 55.0%
GACAGCAGCTCCTCTTCTGT+AGG - tig0021446:104601-104620 None:intergenic 55.0%
GAAGGCTGCTAGGGAATCTG+AGG + tig0021446:104663-104682 Msa1391750:CDS 55.0%
AGATCTGGCACAGGTTTGGC+TGG + tig0021446:104859-104878 Msa1391750:intron 55.0%
GATCTGGCACAGGTTTGGCT+GGG + tig0021446:104860-104879 Msa1391750:intron 55.0%
GATAGGTCCTACTGGGACAG+TGG + tig0021446:105004-105023 Msa1391750:CDS 55.0%
! GACAGTGGTGACTTTTCCCG+AGG + tig0021446:105019-105038 Msa1391750:CDS 55.0%
! CCTGGACAGCCTTGTAGCAT+TGG - tig0021446:105697-105716 None:intergenic 55.0%
CCAATGCTACAAGGCTGTCC+AGG + tig0021446:105694-105713 Msa1391750:CDS 55.0%
TCAGCAGCTTCCTCCGAAGG+AGG - tig0021446:102864-102883 None:intergenic 60.0%
CTCCGTCCACTAGCCGAAGA+TGG - tig0021446:102975-102994 None:intergenic 60.0%
!!! CTGTTGCTTTTGGCGCGGTC+TGG - tig0021446:103297-103316 None:intergenic 60.0%
CAGACCGCGCCAAAAGCAAC+AGG + tig0021446:103295-103314 Msa1391750:CDS 60.0%
CCTTCCACGGAAGGCCTTTG+AGG - tig0021446:103924-103943 None:intergenic 60.0%
CCTCAAAGGCCTTCCGTGGA+AGG + tig0021446:103921-103940 Msa1391750:CDS 60.0%
CGGGAAGGAAGAGACGTCGA+TGG + tig0021446:103969-103988 Msa1391750:CDS 60.0%
CCCAAGCGACGTGTACTGGA+TGG + tig0021446:104066-104085 Msa1391750:CDS 60.0%
AGGGTCTGCTGGAGAGCAAG+AGG + tig0021446:104320-104339 Msa1391750:CDS 60.0%
CGTCAACGGGCCCTTCAATC+AGG + tig0021446:104420-104439 Msa1391750:CDS 60.0%
TCACTTCTAGGTGGGGCAGG+AGG - tig0021446:104498-104517 None:intergenic 60.0%
GCGCCAAGAAGATCTGGCAC+AGG + tig0021446:104850-104869 Msa1391750:CDS 60.0%
GCAGGGATCCCCATTTCCTC+GGG - tig0021446:105038-105057 None:intergenic 60.0%
CGCAGGGATCCCCATTTCCT+CGG - tig0021446:105039-105058 None:intergenic 60.0%
GCTGTCCAGGCGAAGACTAC+TGG + tig0021446:105707-105726 Msa1391750:CDS 60.0%
AGAGGAGCCAACCATCGCGC+AGG + tig0021446:102772-102791 Msa1391750:CDS 65.0%
GAGGCCTCAAAGGCCTTCCG+TGG + tig0021446:103917-103936 Msa1391750:CDS 65.0%
!! GGGCGGATTTGGTGTCGGGA+AGG + tig0021446:103954-103973 Msa1391750:CDS 65.0%
GCACACATCTCGCGAGGTGG+AGG - tig0021446:105608-105627 None:intergenic 65.0%
CCAGCACACATCTCGCGAGG+TGG - tig0021446:105611-105630 None:intergenic 65.0%
CCACCTCGCGAGATGTGTGC+TGG + tig0021446:105608-105627 Msa1391750:CDS 65.0%
GGACCAGCACACATCTCGCG+AGG - tig0021446:105614-105633 None:intergenic 65.0%
GCCAACCATCGCGCAGGCCA+CGG + tig0021446:102778-102797 Msa1391750:CDS 70.0%
GCCGTGGCCTGCGCGATGGT+TGG - tig0021446:102782-102801 None:intergenic 75.0%
TCAGGCCGTGGCCTGCGCGA+TGG - tig0021446:102786-102805 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0021446 gene 102271 106014 102271 ID=Msa1391750;Name=Msa1391750
tig0021446 mRNA 102271 106014 102271 ID=Msa1391750-mRNA-1;Parent=Msa1391750;Name=Msa1391750-mRNA-1;_AED=0.03;_eAED=0.03;_QI=446|0.66|0.85|0.85|1|1|7|269|568
tig0021446 exon 102271 103316 102271 ID=Msa1391750-mRNA-1:exon:12811;Parent=Msa1391750-mRNA-1
tig0021446 exon 103877 104513 103877 ID=Msa1391750-mRNA-1:exon:12812;Parent=Msa1391750-mRNA-1
tig0021446 exon 104584 104684 104584 ID=Msa1391750-mRNA-1:exon:12813;Parent=Msa1391750-mRNA-1
tig0021446 exon 104782 104871 104782 ID=Msa1391750-mRNA-1:exon:12814;Parent=Msa1391750-mRNA-1
tig0021446 exon 104923 104928 104923 ID=Msa1391750-mRNA-1:exon:12815;Parent=Msa1391750-mRNA-1
tig0021446 exon 104954 105081 104954 ID=Msa1391750-mRNA-1:exon:12816;Parent=Msa1391750-mRNA-1
tig0021446 exon 105601 106014 105601 ID=Msa1391750-mRNA-1:exon:12817;Parent=Msa1391750-mRNA-1
tig0021446 five_prime_UTR 102271 102716 102271 ID=Msa1391750-mRNA-1:five_prime_utr;Parent=Msa1391750-mRNA-1
tig0021446 CDS 102717 103316 102717 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 CDS 103877 104513 103877 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 CDS 104584 104684 104584 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 CDS 104782 104871 104782 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 CDS 104923 104928 104923 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 CDS 104954 105081 104954 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 CDS 105601 105745 105601 ID=Msa1391750-mRNA-1:cds;Parent=Msa1391750-mRNA-1
tig0021446 three_prime_UTR 105746 106014 105746 ID=Msa1391750-mRNA-1:three_prime_utr;Parent=Msa1391750-mRNA-1
Gene Sequence

>Msa1391750

ATGGAAGATTTAGGATCTACCCGGTTTGATGGTATCAGCAATGCTGTGAGGAGGAAGAGGAGCCAACCATCGCGCAGGCCACGGCCTGATTCACAGCCTATTCCTGATCCTGAAGGTCGTGATTTTTCGCCATCATCATCAACACCTCCTTCGGAGGAAGCTGCTGATAAAGTTGTTTCTAGTGATGAGAATGATGGTTATGATAATACTGGTTCCAAGAGAAAAGAATTTAATCTCAACCATTGTGTTACTCAACCATCTTCGGCTAGTGGACGGAGTAGTTTAAATAATAGACGGAGCAGTGAAGGTGTTCTTGCTCCTGCTAATTGGAAAGGTTCTAGTAGCAAATTTAAAGATAGTTTTGATTCAGAGTCGAAAAATGCTGATATATTTGGTGGAAGGAATCCTGAGAGTACAAGTTTGGGGCAGCTTCAAGATGGATTGGGGAGTGAGAACAGGGTTAAGAAGGTTAAACTCAAGGTTGGTGGTGTGACACGTACGATACAAGCTAACTCTGCATCTAACAGTGCTTCAGGAAGCGGATCAACTTCGAAAAGCTCTCGTTTATCGGACGGCTCCAGACCGCGCCAAAAGCAACAGAGTAATTCAGACGATAATATTTCTCCGTCTGCTAAGAAGCGAGGCCTCAAAGGCCTTCCGTGGAAGGATTTCAAAAGGGGCGGATTTGGTGTCGGGAAGGAAGAGACGTCGATGGGGAAGATATCCATAAAGAACACATCTAGCAAGCAAGGAGACAAGTCTGAACCTGTTCGTAAGAGCAAGAGAGTACCCAAGCGACGTGTACTGGATGGAGAATTTGACGATGATGCTGATGATGAGATTCGGTACTTAGAAAAACTTAAAACATCAAAAGTTTCTGCAGTTTACAGAGATGAAGAAGAATCAAGCAGGAAACATCGAAAACTCTCTAGCGTCTCTAATATGGACAATGCTGCCTCATCAAGGTCAGGCAAAGATGGCAAGAAAAGATCTAGATCTGATAGAATGCTTGAAGATACAGATTATGAGGATGAAGTGGAATCAGGGTCTGCTGGAGAGCAAGAGGATAAGAAAAAGAAAAAGCAGAGGAAGGAATCTGTTGATGTATTGATGGACACTAAGAGGGAAATGACTCTTACAACGCGTCAACGGGCCCTTCAATCAGGCAAAGATGCTTCTGCATCTAATGCGAGTTTAATCGAGTTTCCCAATGGATTACCTCCTGCCCCACCTAGAAAGCAAAAAGAGAAGCCTACAGAAGAGGAGCTGCTGTCAAAGAAAACCGAGGCTGCCATTAGGCGTAAAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGATTCTAGCAGGAAAAAGCGAGAGGATAAAATAAAGAAGCGCCAAGAAGATCTGGCACAGCTTAGAGAGAAGGCAGCCGAAGCAGAGAAGCATGCATCAAATACCATCAGATATGTGATAGGTCCTACTGGGACAGTGGTGACTTTTCCCGAGGAAATGGGGATCCCTGCGATTATAAACACCAAGCCCATCAGTTATCCTCCACCTCGCGAGATGTGTGCTGGTCCATCATGTACAAATCCGTATAAATACCGGGATTCAAAAACCAAGGTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTCCAGGCGAAGACTACTGGTGAAATTACCAGCTGA

Protein sequence

>Msa1391750

MEDLGSTRFDGISNAVRRKRSQPSRRPRPDSQPIPDPEGRDFSPSSSTPPSEEAADKVVSSDENDGYDNTGSKRKEFNLNHCVTQPSSASGRSSLNNRRSSEGVLAPANWKGSSSKFKDSFDSESKNADIFGGRNPESTSLGQLQDGLGSENRVKKVKLKVGGVTRTIQANSASNSASGSGSTSKSSRLSDGSRPRQKQQSNSDDNISPSAKKRGLKGLPWKDFKRGGFGVGKEETSMGKISIKNTSSKQGDKSEPVRKSKRVPKRRVLDGEFDDDADDEIRYLEKLKTSKVSAVYRDEEESSRKHRKLSSVSNMDNAASSRSGKDGKKRSRSDRMLEDTDYEDEVESGSAGEQEDKKKKKQRKESVDVLMDTKREMTLTTRQRALQSGKDASASNASLIEFPNGLPPAPPRKQKEKPTEEELLSKKTEAAIRRKMQVEKAARESEAEAIRKILGQDSSRKKREDKIKKRQEDLAQLREKAAEAEKHASNTIRYVIGPTGTVVTFPEEMGIPAIINTKPISYPPPREMCAGPSCTNPYKYRDSKTKVPLCSLQCYKAVQAKTTGEITS*