Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1130300 | XP_003626551.2 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1130300 | sp|A0A1J6KGJ9|JAR4_NICAT | 73.875 | 578 | 146 | 2 | 1 | 578 | 4 | 576 | 0.0 | 902 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1130300 | G7L419 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003300 | Msa1130300 | 0.801321 | 9.516206e-49 | -8.615850e-47 |
Msa0658570 | Msa1130300 | 0.807648 | 4.561190e-50 | -8.615850e-47 |
Msa0234440 | Msa1130300 | 0.829898 | 3.978704e-55 | -8.615850e-47 |
Msa1037620 | Msa1130300 | 0.971932 | 6.009349e-134 | -8.615850e-47 |
Msa0272730 | Msa1130300 | 0.836558 | 8.723266e-57 | -8.615850e-47 |
Msa0306810 | Msa1130300 | 0.804481 | 2.115605e-49 | -8.615850e-47 |
Msa1130300 | Msa1185310 | 0.816488 | 5.390036e-52 | -8.615850e-47 |
Msa1130300 | Msa1185320 | 0.823360 | 1.444588e-53 | -8.615850e-47 |
Msa1130300 | Msa1264330 | -0.800331 | 1.515553e-48 | -8.615850e-47 |
Msa1130300 | Msa1267610 | 0.833873 | 4.153537e-56 | -8.615850e-47 |
Msa1130300 | Msa1288340 | 0.806039 | 9.982332e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1130300 | MtrunA17_Chr7g0275471 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Msa1130300 | MtrunA17_Chr8g0347381 | 74.611 | 579 | 143 | 1 | 1 | 579 | 1 | 575 | 0.0 | 925 |
Msa1130300 | MtrunA17_Chr8g0347391 | 73.402 | 579 | 150 | 1 | 1 | 579 | 8 | 582 | 0.0 | 905 |
Msa1130300 | MtrunA17_Chr8g0347421 | 73.647 | 573 | 147 | 1 | 1 | 573 | 1 | 569 | 0.0 | 898 |
Msa1130300 | MtrunA17_Chr8g0347431 | 71.535 | 404 | 111 | 1 | 176 | 579 | 2 | 401 | 0.0 | 630 |
Msa1130300 | MtrunA17_Chr8g0352391 | 68.125 | 320 | 54 | 2 | 260 | 579 | 1 | 272 | 5.72e-148 | 427 |
Msa1130300 | MtrunA17_Chr5g0401641 | 39.931 | 581 | 338 | 6 | 5 | 578 | 15 | 591 | 6.24e-146 | 434 |
Msa1130300 | MtrunA17_Chr5g0421331 | 39.367 | 569 | 327 | 8 | 12 | 575 | 21 | 576 | 1.36e-136 | 409 |
Msa1130300 | MtrunA17_Chr8g0361551 | 35.919 | 593 | 358 | 9 | 1 | 575 | 1 | 589 | 2.40e-128 | 389 |
Msa1130300 | MtrunA17_Chr4g0022401 | 46.402 | 403 | 204 | 5 | 11 | 401 | 19 | 421 | 2.13e-127 | 380 |
Msa1130300 | MtrunA17_Chr2g0318991 | 36.254 | 582 | 348 | 8 | 12 | 575 | 15 | 591 | 5.96e-125 | 380 |
Msa1130300 | MtrunA17_Chr1g0195771 | 36.972 | 568 | 333 | 10 | 7 | 554 | 50 | 612 | 2.63e-118 | 364 |
Msa1130300 | MtrunA17_Chr4g0023301 | 35.223 | 494 | 304 | 7 | 92 | 576 | 6 | 492 | 8.58e-105 | 325 |
Msa1130300 | MtrunA17_Chr5g0401631 | 41.818 | 385 | 205 | 6 | 199 | 577 | 1 | 372 | 3.89e-102 | 314 |
Msa1130300 | MtrunA17_Chr1g0169871 | 82.955 | 176 | 30 | 0 | 318 | 493 | 139 | 314 | 2.74e-99 | 305 |
Msa1130300 | MtrunA17_Chr1g0169871 | 71.429 | 70 | 20 | 0 | 10 | 79 | 37 | 106 | 4.70e-24 | 103 |
Msa1130300 | MtrunA17_Chr7g0259291 | 34.669 | 574 | 339 | 15 | 11 | 561 | 5 | 565 | 4.23e-95 | 302 |
Msa1130300 | MtrunA17_Chr4g0022391 | 53.371 | 178 | 81 | 1 | 401 | 578 | 11 | 186 | 4.84e-63 | 205 |
Msa1130300 | MtrunA17_Chr8g0347441 | 68.182 | 132 | 42 | 0 | 1 | 132 | 1 | 132 | 2.69e-62 | 201 |
Msa1130300 | MtrunA17_Chr8g0352401 | 68.613 | 137 | 34 | 1 | 10 | 146 | 1 | 128 | 1.01e-59 | 194 |
Msa1130300 | MtrunA17_Chr7g0259401 | 35.055 | 271 | 143 | 7 | 140 | 408 | 10 | 249 | 6.94e-37 | 137 |
Msa1130300 | MtrunA17_Chr5g0401621 | 36.538 | 156 | 98 | 1 | 5 | 159 | 15 | 170 | 1.47e-23 | 98.2 |
Msa1130300 | MtrunA17_Chr4g0023291 | 44.706 | 85 | 47 | 0 | 9 | 93 | 28 | 112 | 1.10e-16 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1130300 | AT2G46370.4 | 63.746 | 582 | 200 | 5 | 1 | 578 | 12 | 586 | 0.0 | 793 |
Msa1130300 | AT2G46370.1 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
Msa1130300 | AT2G46370.2 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
Msa1130300 | AT2G46370.3 | 65.209 | 503 | 166 | 3 | 78 | 578 | 1 | 496 | 0.0 | 715 |
Msa1130300 | AT4G03400.2 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
Msa1130300 | AT4G03400.1 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
Msa1130300 | AT4G37390.1 | 38.302 | 577 | 342 | 8 | 12 | 578 | 22 | 594 | 1.89e-137 | 412 |
Msa1130300 | AT2G23170.1 | 38.087 | 575 | 339 | 7 | 12 | 578 | 21 | 586 | 1.52e-136 | 410 |
Msa1130300 | AT2G14960.1 | 38.609 | 575 | 330 | 8 | 12 | 578 | 21 | 580 | 1.72e-134 | 404 |
Msa1130300 | AT4G27260.1 | 38.169 | 579 | 335 | 8 | 12 | 575 | 26 | 596 | 2.62e-132 | 400 |
Msa1130300 | AT1G23160.1 | 38.621 | 580 | 324 | 11 | 12 | 576 | 16 | 578 | 4.30e-132 | 398 |
Msa1130300 | AT1G48660.2 | 37.282 | 574 | 336 | 9 | 14 | 575 | 7 | 568 | 1.38e-131 | 397 |
Msa1130300 | AT1G48660.1 | 37.128 | 571 | 338 | 8 | 14 | 575 | 7 | 565 | 2.44e-131 | 396 |
Msa1130300 | AT1G59500.1 | 38.342 | 579 | 333 | 10 | 12 | 578 | 22 | 588 | 4.37e-131 | 396 |
Msa1130300 | AT5G54510.1 | 36.797 | 587 | 352 | 8 | 3 | 575 | 15 | 596 | 6.08e-129 | 391 |
Msa1130300 | AT5G13320.3 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.08e-126 | 383 |
Msa1130300 | AT5G13320.1 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.08e-126 | 383 |
Msa1130300 | AT5G13320.2 | 37.050 | 583 | 339 | 10 | 8 | 575 | 20 | 589 | 3.43e-126 | 383 |
Msa1130300 | AT5G13360.1 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.41e-122 | 372 |
Msa1130300 | AT5G13360.2 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.41e-122 | 372 |
Msa1130300 | AT5G13360.3 | 36.780 | 590 | 347 | 10 | 1 | 575 | 79 | 657 | 6.23e-121 | 372 |
Msa1130300 | AT5G51470.1 | 36.907 | 569 | 337 | 8 | 11 | 569 | 9 | 565 | 2.72e-120 | 368 |
Msa1130300 | AT5G13370.1 | 36.486 | 592 | 347 | 12 | 1 | 575 | 1 | 580 | 4.01e-120 | 368 |
Msa1130300 | AT1G28130.1 | 36.410 | 585 | 341 | 11 | 17 | 575 | 17 | 596 | 9.02e-120 | 367 |
Msa1130300 | AT5G13350.1 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.62e-118 | 361 |
Msa1130300 | AT5G13350.2 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.62e-118 | 361 |
Msa1130300 | AT5G13380.1 | 36.054 | 588 | 354 | 10 | 1 | 575 | 31 | 609 | 4.23e-117 | 361 |
Msa1130300 | AT2G47750.1 | 37.113 | 582 | 348 | 11 | 5 | 575 | 3 | 577 | 1.19e-116 | 358 |
Msa1130300 | AT1G48670.1 | 32.042 | 568 | 318 | 9 | 16 | 575 | 10 | 517 | 2.08e-97 | 306 |
Msa1130300 | AT5G51470.2 | 36.383 | 481 | 286 | 6 | 98 | 569 | 6 | 475 | 2.65e-97 | 305 |
Msa1130300 | AT1G28130.2 | 36.748 | 449 | 257 | 8 | 150 | 575 | 9 | 453 | 7.83e-91 | 288 |
Msa1130300 | AT1G48670.2 | 36.165 | 412 | 245 | 5 | 172 | 575 | 5 | 406 | 5.45e-89 | 281 |
Msa1130300 | AT1G48690.1 | 35.263 | 190 | 114 | 6 | 14 | 200 | 7 | 190 | 1.32e-21 | 93.2 |
Find 151 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAATGCAAAGTACATTTA+TGG | 0.084381 | 7_3:+82422063 | Msa1130300:CDS |
CTATTACCACTATGTCTTTA+AGG | 0.098138 | 7_3:+82420902 | Msa1130300:CDS |
TCATTCCATGGTATATATTT+TGG | 0.122722 | 7_3:-82421048 | None:intergenic |
AGTATAGTATTAGGTAAAAT+TGG | 0.157891 | 7_3:-82417617 | None:intergenic |
ATTATTAGTAGAAGAGAAAT+TGG | 0.187935 | 7_3:+82424103 | Msa1130300:CDS |
CTCACTAGTAGTTCCTTAAT+TGG | 0.188333 | 7_3:+82417666 | Msa1130300:five_prime_UTR |
GGAAACACTCAAAAGAATTT+TGG | 0.206331 | 7_3:+82420717 | Msa1130300:CDS |
GCTGAATATTTGCAGAATTT+TGG | 0.212038 | 7_3:+82420754 | Msa1130300:CDS |
GCTGACTCTAATTCCAATTA+AGG | 0.212797 | 7_3:-82417679 | None:intergenic |
AGGTTCTATGGAACCATATT+TGG | 0.217500 | 7_3:+82422095 | Msa1130300:CDS |
TGGATTATGTTAGCTAGTTC+TGG | 0.251144 | 7_3:-82421988 | None:intergenic |
TATGCTGTGCTTCCTCAAAT+TGG | 0.269811 | 7_3:+82422231 | Msa1130300:CDS |
TACGTAGTTCCCTGGTTCTT+TGG | 0.271512 | 7_3:-82424159 | None:intergenic |
TGGCATTATGACAGGTTCTA+TGG | 0.272655 | 7_3:+82422083 | Msa1130300:CDS |
AGGTAAAATTGGGAAATAAT+TGG | 0.274739 | 7_3:-82417606 | None:intergenic |
TCAGAGCCTTTGAACAAGTT+TGG | 0.276112 | 7_3:+82421869 | Msa1130300:CDS |
TTTCAGGTTTATACAGGTAT+AGG | 0.281287 | 7_3:+82423937 | Msa1130300:intron |
CTTGATCATTACCTTGGATT+AGG | 0.281601 | 7_3:+82424347 | Msa1130300:CDS |
CCTTAGAACTTCGGGTTGTT+AGG | 0.281656 | 7_3:+82424303 | Msa1130300:CDS |
CTTAAAGACATAGTGGTAAT+AGG | 0.285904 | 7_3:-82420901 | None:intergenic |
CAGGGAACTACGTAATCTTC+TGG | 0.286130 | 7_3:+82424168 | Msa1130300:CDS |
AGTCCAGATGAAGTGATATT+TGG | 0.291634 | 7_3:+82421739 | Msa1130300:CDS |
CCTAACAACCCGAAGTTCTA+AGG | 0.305448 | 7_3:-82424303 | None:intergenic |
TCAAGAATTCTACAGATAAA+AGG | 0.326689 | 7_3:-82420847 | None:intergenic |
CAGAGACAGAGTATAGTATT+AGG | 0.329230 | 7_3:-82417626 | None:intergenic |
CAGAGCCTTTGAACAAGTTT+GGG | 0.335203 | 7_3:+82421870 | Msa1130300:CDS |
ATGTTAGCTAGTTCTGGATT+TGG | 0.354156 | 7_3:-82421982 | None:intergenic |
TTTATCTGTAGAATTCTTGA+TGG | 0.355516 | 7_3:+82420850 | Msa1130300:CDS |
ACTAAATTTCAGGTTTATAC+AGG | 0.363189 | 7_3:+82423931 | Msa1130300:intron |
TATTGGAGCCTTAGAACTTC+GGG | 0.374940 | 7_3:+82424295 | Msa1130300:CDS |
GGGGATGTGGTAAAAGTTAT+GGG | 0.377506 | 7_3:+82423963 | Msa1130300:CDS |
GAAGTTGAAGATTCTTTGTT+GGG | 0.382616 | 7_3:-82417472 | None:intergenic |
TCTCGTAAAGTCAACTCTAT+TGG | 0.387723 | 7_3:+82424278 | Msa1130300:CDS |
CCTACCTGCCCAAGTATATT+CGG | 0.392294 | 7_3:+82424618 | Msa1130300:three_prime_UTR |
AAGGCTTTAAACTTCATATA+CGG | 0.393788 | 7_3:+82421604 | Msa1130300:CDS |
CTACGAATAAACTTTAGTTC+TGG | 0.395325 | 7_3:-82424002 | None:intergenic |
AGTAGGTGGTGTGTTGTTTG+TGG | 0.395439 | 7_3:-82417552 | None:intergenic |
AGCAAACAGTTCAAAACAAA+AGG | 0.397243 | 7_3:+82421628 | Msa1130300:CDS |
CCTTTGTGTACTGCTGACTA+TGG | 0.399568 | 7_3:+82422147 | Msa1130300:CDS |
TGAAGTTGAAGATTCTTTGT+TGG | 0.401210 | 7_3:-82417473 | None:intergenic |
CCATAAATGTACTTTGCATT+GGG | 0.403210 | 7_3:-82422063 | None:intergenic |
GATGTATAGGATTAAGCAAC+TGG | 0.406579 | 7_3:+82422016 | Msa1130300:CDS |
ATAGATGACAATATAATGAT+TGG | 0.410685 | 7_3:-82421774 | None:intergenic |
GCCATAAATGTACTTTGCAT+TGG | 0.412688 | 7_3:-82422064 | None:intergenic |
TTCATTGCATGTTTGTAAGA+TGG | 0.414552 | 7_3:-82421694 | None:intergenic |
AATAAATGAAAATGAAATGA+TGG | 0.414928 | 7_3:-82417503 | None:intergenic |
ATAATCCACAAAAGATGTAT+AGG | 0.416203 | 7_3:+82422003 | Msa1130300:CDS |
TTAAAACAGCCGAATATACT+TGG | 0.419782 | 7_3:-82424627 | None:intergenic |
TGGGAGATGGAATAGTAAAT+TGG | 0.421018 | 7_3:-82417453 | None:intergenic |
ACAGCATAAGTTGCCAATTC+AGG | 0.421103 | 7_3:-82422216 | None:intergenic |
TATTGAAGAAAGTGACCAAT+TGG | 0.422937 | 7_3:-82417729 | None:intergenic |
CTGTTGAAGGGGTGTGAGTT+AGG | 0.424996 | 7_3:+82420608 | Msa1130300:five_prime_UTR |
GCTAAAGAAAACTCTGTTGA+AGG | 0.425278 | 7_3:+82420595 | Msa1130300:five_prime_UTR |
TTTCCGCGAGGAAGTTCAAT+TGG | 0.426349 | 7_3:+82421810 | Msa1130300:CDS |
AGGGGATGTGGTAAAAGTTA+TGG | 0.432684 | 7_3:+82423962 | Msa1130300:CDS |
CCGCCAAATATCACTTCATC+TGG | 0.432735 | 7_3:-82421742 | None:intergenic |
AAGTGACCAATTGGATGAAA+AGG | 0.438836 | 7_3:-82417720 | None:intergenic |
GTATAGTATTAGGTAAAATT+GGG | 0.439650 | 7_3:-82417616 | None:intergenic |
TACATTTATGGCATTATGAC+AGG | 0.440289 | 7_3:+82422075 | Msa1130300:CDS |
AAACCACAATGCAGATATAT+CGG | 0.444589 | 7_3:+82421082 | Msa1130300:CDS |
AAGATTCTTGATCATTACCT+TGG | 0.449111 | 7_3:+82424341 | Msa1130300:CDS |
TTAGTTCTGGAGTTGAGTTA+TGG | 0.454186 | 7_3:-82423989 | None:intergenic |
ATTGTTATGACCACTCCAAC+AGG | 0.456262 | 7_3:+82422363 | Msa1130300:CDS |
ATGGCTAGTAGTAGAGTAGT+AGG | 0.461090 | 7_3:-82417569 | None:intergenic |
CTAGTGAGTTTGTGTATGTA+TGG | 0.461123 | 7_3:-82417651 | None:intergenic |
CTATTGGAGCCTTAGAACTT+CGG | 0.462174 | 7_3:+82424294 | Msa1130300:CDS |
CAGGTATAGGCTAGGGGATG+TGG | 0.467515 | 7_3:+82423950 | Msa1130300:CDS |
GAAGATTCTTTGTTGGGAGA+TGG | 0.468160 | 7_3:-82417466 | None:intergenic |
TGCAGTTCTGGCACTACGCA+AGG | 0.476283 | 7_3:+82421021 | Msa1130300:intron |
AACAAAACATGTGGAGTGGT+TGG | 0.476869 | 7_3:-82417416 | None:intergenic |
GAACTTCGGGTTGTTAGGAA+AGG | 0.487975 | 7_3:+82424308 | Msa1130300:CDS |
ATGAAAATGAAATGATGGGT+TGG | 0.489675 | 7_3:-82417498 | None:intergenic |
AACTCAAAGTAACCAATTTG+AGG | 0.491446 | 7_3:-82422243 | None:intergenic |
ATCTTACAAACATGCAATGA+AGG | 0.492223 | 7_3:+82421696 | Msa1130300:CDS |
GCAAACAGTTCAAAACAAAA+GGG | 0.492256 | 7_3:+82421629 | Msa1130300:CDS |
CTAAAGAAAACTCTGTTGAA+GGG | 0.498544 | 7_3:+82420596 | Msa1130300:five_prime_UTR |
GAGTGAATGCTGCAACTGTT+TGG | 0.498901 | 7_3:+82424223 | Msa1130300:CDS |
CCTTTGTGTTAATCCTCAGC+CGG | 0.501458 | 7_3:+82422302 | Msa1130300:CDS |
AATTACTAAAGATGCAGAAA+GGG | 0.503049 | 7_3:+82420687 | Msa1130300:CDS |
CAGAAGATTACGTAGTTCCC+TGG | 0.503210 | 7_3:-82424167 | None:intergenic |
GTTTATACAGGTATAGGCTA+GGG | 0.505461 | 7_3:+82423943 | Msa1130300:CDS |
TCAGTGAGTCCCACCGGCTG+AGG | 0.514095 | 7_3:-82422315 | None:intergenic |
TCAAACAATTCATCATTCCA+TGG | 0.514252 | 7_3:-82421060 | None:intergenic |
CTCTTCCCAAACTTGTTCAA+AGG | 0.517970 | 7_3:-82421875 | None:intergenic |
AGATGAAGACCTGTTCCTAT+AGG | 0.519223 | 7_3:-82421115 | None:intergenic |
GACATAGCAGTTCGAATGGA+GGG | 0.520344 | 7_3:-82421946 | None:intergenic |
AGGGAACTACGTAATCTTCT+GGG | 0.522975 | 7_3:+82424169 | Msa1130300:CDS |
CCTGTTCCTATAGGCAAAAG+AGG | 0.524965 | 7_3:-82421106 | None:intergenic |
TAATCTTCTGGGAAATCAGT+GGG | 0.525589 | 7_3:+82424180 | Msa1130300:CDS |
GGTTTATACAGGTATAGGCT+AGG | 0.526104 | 7_3:+82423942 | Msa1130300:intron |
TAATTACTAAAGATGCAGAA+AGG | 0.529649 | 7_3:+82420686 | Msa1130300:CDS |
TTGTGTTAATCCTCAGCCGG+TGG | 0.532157 | 7_3:+82422305 | Msa1130300:CDS |
CCAGATGAAGTGATATTTGG+CGG | 0.533852 | 7_3:+82421742 | Msa1130300:CDS |
TGAAAATGAAATGATGGGTT+GGG | 0.537697 | 7_3:-82417497 | None:intergenic |
GATGCTTCTCCCATTCTCAC+TGG | 0.537832 | 7_3:+82420874 | Msa1130300:CDS |
GCTGACTATGGAGCTTCTGA+AGG | 0.543026 | 7_3:+82422159 | Msa1130300:CDS |
GTAAAACTGAGGCACTATGC+AGG | 0.551972 | 7_3:+82422117 | Msa1130300:CDS |
GGAAATAATTGGTTGTGACT+TGG | 0.554414 | 7_3:-82417595 | None:intergenic |
ACTAAATTCTCTGCCACCCC+AGG | 0.556766 | 7_3:+82417767 | Msa1130300:five_prime_UTR |
GGACTCACTGAGGTTAAAGT+TGG | 0.561408 | 7_3:+82422327 | Msa1130300:CDS |
TTTAGACATAGCAGTTCGAA+TGG | 0.562118 | 7_3:-82421950 | None:intergenic |
GAAAGATTTACAGTTAGCCG+TGG | 0.563252 | 7_3:+82424067 | Msa1130300:CDS |
AAGTCTTTGTGAGTAGCTAG+TGG | 0.565261 | 7_3:-82420820 | None:intergenic |
CTTTGTAATGATATAAGAGA+AGG | 0.565767 | 7_3:+82421898 | Msa1130300:CDS |
ACTAGCTACTCACAAAGACT+TGG | 0.569122 | 7_3:+82420822 | Msa1130300:CDS |
GTTGATTTATCCAAAGAACC+AGG | 0.570837 | 7_3:+82424149 | Msa1130300:CDS |
ACAGCCGAATATACTTGGGC+AGG | 0.572353 | 7_3:-82424622 | None:intergenic |
TCATTCTCAAGCTGTGTGAG+AGG | 0.572827 | 7_3:-82422270 | None:intergenic |
ACAACACCTTAAAGACATAG+TGG | 0.579090 | 7_3:-82420908 | None:intergenic |
AGATGCAGAAAGGGTTCAGA+GGG | 0.579727 | 7_3:+82420696 | Msa1130300:CDS |
TGTGTAGGACCTACACATCT+TGG | 0.580216 | 7_3:-82424395 | None:intergenic |
TAACAGCTGTTCCTAATCCA+AGG | 0.581897 | 7_3:-82424358 | None:intergenic |
GGAAGCCAAAATATATACCA+TGG | 0.582732 | 7_3:+82421043 | Msa1130300:CDS |
TAAAACAGCCGAATATACTT+GGG | 0.584009 | 7_3:-82424626 | None:intergenic |
TATAAAACACCAAGATGTGT+AGG | 0.586504 | 7_3:+82424386 | Msa1130300:CDS |
ACTATGGAGCTTCTGAAGGG+TGG | 0.586810 | 7_3:+82422163 | Msa1130300:CDS |
CCGAATATACTTGGGCAGGT+AGG | 0.588559 | 7_3:-82424618 | None:intergenic |
ATAGGATTAAGCAACTGGTA+TGG | 0.589066 | 7_3:+82422021 | Msa1130300:CDS |
CAGAACTAAAGTTTATTCGT+AGG | 0.592685 | 7_3:+82424003 | Msa1130300:CDS |
TTATATTGTCATCTATTATG+CGG | 0.600773 | 7_3:+82421781 | Msa1130300:CDS |
ACAGTTAGCCGTGGAAGCAG+CGG | 0.606164 | 7_3:+82424076 | Msa1130300:CDS |
TTAACCTCAGTGAGTCCCAC+CGG | 0.608632 | 7_3:-82422321 | None:intergenic |
AGACATAGCAGTTCGAATGG+AGG | 0.608831 | 7_3:-82421947 | None:intergenic |
AGCAGTTCGAATGGAGGGAA+CGG | 0.609463 | 7_3:-82421941 | None:intergenic |
GACCAATTGGATGAAAAGGA+AGG | 0.612578 | 7_3:-82417716 | None:intergenic |
GCATAAGTTGCCAATTCAGG+TGG | 0.614033 | 7_3:-82422213 | None:intergenic |
ATAAATGAAAATGAAATGAT+GGG | 0.615841 | 7_3:-82417502 | None:intergenic |
TGAGTACTTACCTGTTGGAG+TGG | 0.617705 | 7_3:-82422373 | None:intergenic |
ACAATAATAACAATCGACAT+TGG | 0.619144 | 7_3:+82424485 | Msa1130300:three_prime_UTR |
TAAAGAAAACTCTGTTGAAG+GGG | 0.621449 | 7_3:+82420597 | Msa1130300:five_prime_UTR |
GCAGTTCTGGCACTACGCAA+GGG | 0.622048 | 7_3:+82421022 | Msa1130300:intron |
GCTAGTAGTAGAGTAGTAGG+TGG | 0.630535 | 7_3:-82417566 | None:intergenic |
GTAATCTTCTGGGAAATCAG+TGG | 0.631300 | 7_3:+82424179 | Msa1130300:CDS |
AAGATGCAGAAAGGGTTCAG+AGG | 0.633150 | 7_3:+82420695 | Msa1130300:CDS |
AAAGTTTATAGTACCTGGGG+TGG | 0.633453 | 7_3:-82417780 | None:intergenic |
CTGACTATGGAGCTTCTGAA+GGG | 0.645246 | 7_3:+82422160 | Msa1130300:CDS |
CCATAGTCAGCAGTACACAA+AGG | 0.646601 | 7_3:-82422147 | None:intergenic |
GGTCCGATATATCTGCATTG+TGG | 0.647561 | 7_3:-82421085 | None:intergenic |
TTTATACAGGTATAGGCTAG+GGG | 0.649562 | 7_3:+82423944 | Msa1130300:CDS |
ATTGGTTGTGACTTGGCACA+TGG | 0.650294 | 7_3:-82417588 | None:intergenic |
CAAACAGTTCAAAACAAAAG+GGG | 0.653886 | 7_3:+82421630 | Msa1130300:CDS |
TTGATTTATCCAAAGAACCA+GGG | 0.653926 | 7_3:+82424150 | Msa1130300:CDS |
GAAAGTGAAAGAGTTTAACA+TGG | 0.667358 | 7_3:+82420639 | Msa1130300:CDS |
CCGGCTGAGGATTAACACAA+AGG | 0.670791 | 7_3:-82422302 | None:intergenic |
AACCATATTTGGTAAAACTG+AGG | 0.675088 | 7_3:+82422106 | Msa1130300:CDS |
AAACAGTTCAAAACAAAAGG+GGG | 0.677242 | 7_3:+82421631 | Msa1130300:CDS |
GTTCTTTGGATAAATCAACA+TGG | 0.683092 | 7_3:-82424145 | None:intergenic |
TGCAACACAATGTTGTGTGT+AGG | 0.700702 | 7_3:-82424410 | None:intergenic |
TCAGCCGGTGGGACTCACTG+AGG | 0.714814 | 7_3:+82422317 | Msa1130300:CDS |
AATCTTCTGGGAAATCAGTG+GGG | 0.735072 | 7_3:+82424181 | Msa1130300:CDS |
ATACCAATTGAACTTCCTCG+CGG | 0.744188 | 7_3:-82421813 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAAAAAAAAAAAAAAAAA+AGG | + | chr7_3:82424546-82424565 | Msa1130300:three_prime_UTR | 0.0% |
!! | AAAAAAAAAAAAAAAAAAAA+GGG | + | chr7_3:82424547-82424566 | Msa1130300:three_prime_UTR | 0.0% |
!!! | TTTAAAATTTTACAAAATCA+CGG | - | chr7_3:82417997-82418016 | None:intergenic | 10.0% |
!!! | AGTATTTTATGTTTAATTTT+GGG | - | chr7_3:82418980-82418999 | None:intergenic | 10.0% |
!!! | AAGTATTTTATGTTTAATTT+TGG | - | chr7_3:82418981-82419000 | None:intergenic | 10.0% |
!!! | ATAATAAACATTTTTTTTGA+AGG | + | chr7_3:82419706-82419725 | Msa1130300:intron | 10.0% |
!! | ATAATAAACATGTTAAATAA+AGG | + | chr7_3:82419739-82419758 | Msa1130300:intron | 10.0% |
!! | AACTATAAAAAAAATTTACA+GGG | - | chr7_3:82420287-82420306 | None:intergenic | 10.0% |
!! | AAACTATAAAAAAAATTTAC+AGG | - | chr7_3:82420286-82420305 | None:intergenic | 10.0% |
!!! | AATTCTTTTTTTATAGTTTT+TGG | - | chr7_3:82420223-82420242 | None:intergenic | 10.0% |
!!! | TTTTTTTTTAACTAAAACTA+AGG | - | chr7_3:82424536-82424555 | None:intergenic | 10.0% |
!! | ATAAATGAAAATGAAATGAT+GGG | - | chr7_3:82417505-82417524 | None:intergenic | 15.0% |
!! | AATAAATGAAAATGAAATGA+TGG | - | chr7_3:82417506-82417525 | None:intergenic | 15.0% |
!!! | AAATTTTACTAGAAAAAACT+TGG | - | chr7_3:82417909-82417928 | None:intergenic | 15.0% |
!! | TAAGCTATATAAATGTTAAA+AGG | - | chr7_3:82418408-82418427 | None:intergenic | 15.0% |
!!! | TTTTAAAGAATTTTTCATGT+TGG | + | chr7_3:82418527-82418546 | Msa1130300:intron | 15.0% |
!! | ATTTAAACATCATGAAATTA+CGG | - | chr7_3:82419116-82419135 | None:intergenic | 15.0% |
!!! | TAATTTTAGAATGTTCTTTT+TGG | + | chr7_3:82419188-82419207 | Msa1130300:intron | 15.0% |
!! | TATTATCTTTGAATAGATAA+GGG | - | chr7_3:82419692-82419711 | None:intergenic | 15.0% |
!! | TTATTATCTTTGAATAGATA+AGG | - | chr7_3:82419693-82419712 | None:intergenic | 15.0% |
!! | AAACTATAAAAAAATTTGCA+AGG | - | chr7_3:82419875-82419894 | None:intergenic | 15.0% |
!!! | GCAAATTTTTTTATAGTTTT+TGG | + | chr7_3:82419876-82419895 | Msa1130300:intron | 15.0% |
!! | CTATAAAAAAAAAATTTGCA+GGG | - | chr7_3:82419935-82419954 | None:intergenic | 15.0% |
!! | ACTATAAAAAAAAAATTTGC+AGG | - | chr7_3:82419936-82419955 | None:intergenic | 15.0% |
!!! | ATTTATTTAAGGCTAAAATA+TGG | - | chr7_3:82420351-82420370 | None:intergenic | 15.0% |
!! | TGAATAAAGAACAATAAAAA+TGG | - | chr7_3:82421207-82421226 | None:intergenic | 15.0% |
!! | TATTCTATAGATACTATTTA+TGG | - | chr7_3:82421463-82421482 | None:intergenic | 15.0% |
!! | AAAATAGAAGAAAAAAACAT+AGG | - | chr7_3:82421489-82421508 | None:intergenic | 15.0% |
!!! | TTTTATTGATTGAAATTCAT+AGG | + | chr7_3:82422568-82422587 | Msa1130300:intron | 15.0% |
!!! | TTTATTGATTGAAATTCATA+GGG | + | chr7_3:82422569-82422588 | Msa1130300:intron | 15.0% |
!!! | AATTTTTCTACTGTATATTT+CGG | + | chr7_3:82423019-82423038 | Msa1130300:intron | 15.0% |
!!! | TGCTATATTTTAATCTTATT+AGG | - | chr7_3:82423473-82423492 | None:intergenic | 15.0% |
!! | AATAAAGTAATAGATATTCT+TGG | + | chr7_3:82423745-82423764 | Msa1130300:intron | 15.0% |
!! | TTCTTAATGAATATTTGAAT+TGG | - | chr7_3:82423870-82423889 | None:intergenic | 15.0% |
!! | GTATAGTATTAGGTAAAATT+GGG | - | chr7_3:82417619-82417638 | None:intergenic | 20.0% |
!! | AGTATAGTATTAGGTAAAAT+TGG | - | chr7_3:82417620-82417639 | None:intergenic | 20.0% |
!!! | GCTTTGTATTTTAAATCTTA+CGG | + | chr7_3:82417866-82417885 | Msa1130300:intron | 20.0% |
!! | ATTACTAATAAGTGCATATT+TGG | - | chr7_3:82418079-82418098 | None:intergenic | 20.0% |
!! | TAATAATCAACCAATCAAAT+TGG | - | chr7_3:82418249-82418268 | None:intergenic | 20.0% |
!!! | TTTTTTGTTTCTTTTGAAGT+AGG | + | chr7_3:82418355-82418374 | Msa1130300:intron | 20.0% |
!! | TTAAAAGGAGTTAAAATGAA+CGG | - | chr7_3:82418393-82418412 | None:intergenic | 20.0% |
!!! | CTTTTTTTTAACCTTTATTG+TGG | + | chr7_3:82418449-82418468 | Msa1130300:intron | 20.0% |
!!! | GTTTGCATATGAATTTTATT+TGG | + | chr7_3:82418502-82418521 | Msa1130300:intron | 20.0% |
!! | AGGATAATATCAGTAAAATA+AGG | - | chr7_3:82418933-82418952 | None:intergenic | 20.0% |
!! | ATCAATTTCATGAAATTTCA+TGG | + | chr7_3:82419087-82419106 | Msa1130300:intron | 20.0% |
!! | TTTCCAAATTGTAGTAATTA+GGG | - | chr7_3:82419611-82419630 | None:intergenic | 20.0% |
!!! | TTTTCCAAATTGTAGTAATT+AGG | - | chr7_3:82419612-82419631 | None:intergenic | 20.0% |
!! | GTTAAATAAAGGCTAAAATA+TGG | + | chr7_3:82419750-82419769 | Msa1130300:intron | 20.0% |
!!! | TCAAAAACAAAATTTTTAGC+AGG | + | chr7_3:82420195-82420214 | Msa1130300:intron | 20.0% |
!! | ACTATAAAAAAAGAATTGCA+TGG | + | chr7_3:82420226-82420245 | Msa1130300:intron | 20.0% |
!!! | GTATTATAAGTACATTGTTT+TGG | - | chr7_3:82420466-82420485 | None:intergenic | 20.0% |
!!! | TTTTAATACAAGATGATGAT+TGG | - | chr7_3:82420541-82420560 | None:intergenic | 20.0% |
!! | CATCATCTTGTATTAAAATT+TGG | + | chr7_3:82420543-82420562 | Msa1130300:intron | 20.0% |
!!! | TCTTTATTTCTGATATTTGT+TGG | + | chr7_3:82421152-82421171 | Msa1130300:intron | 20.0% |
!!! | CTTTATTTCTGATATTTGTT+GGG | + | chr7_3:82421153-82421172 | Msa1130300:intron | 20.0% |
!! | AACAATAAAAATGGTATACA+AGG | - | chr7_3:82421198-82421217 | None:intergenic | 20.0% |
!! | ATAGATGACAATATAATGAT+TGG | - | chr7_3:82421777-82421796 | None:intergenic | 20.0% |
!! | TTATATTGTCATCTATTATG+CGG | + | chr7_3:82421781-82421800 | Msa1130300:CDS | 20.0% |
!!! | TTATTGATTGAAATTCATAG+GGG | + | chr7_3:82422570-82422589 | Msa1130300:intron | 20.0% |
!! | GAATATAAATTAAATGCTCT+TGG | + | chr7_3:82423041-82423060 | Msa1130300:intron | 20.0% |
!! | AAAATGAAAAAAGTAACCTA+AGG | - | chr7_3:82423069-82423088 | None:intergenic | 20.0% |
!! | TGTTACATCATTTAACATTA+GGG | - | chr7_3:82423181-82423200 | None:intergenic | 20.0% |
!! | TTGTTACATCATTTAACATT+AGG | - | chr7_3:82423182-82423201 | None:intergenic | 20.0% |
!! | TTTAAATCTGTAATGATGTA+TGG | + | chr7_3:82423290-82423309 | Msa1130300:intron | 20.0% |
!! | TGTTAAAATCGTAATTGAAA+GGG | - | chr7_3:82423320-82423339 | None:intergenic | 20.0% |
!! | TTGTTAAAATCGTAATTGAA+AGG | - | chr7_3:82423321-82423340 | None:intergenic | 20.0% |
!! | GAAAATATTTATAATGCTTC+TGG | + | chr7_3:82423344-82423363 | Msa1130300:intron | 20.0% |
!! | ATTATTAGTAGAAGAGAAAT+TGG | + | chr7_3:82424103-82424122 | Msa1130300:CDS | 20.0% |
!!! | GTTTCATTTTTTTATAAGCA+TGG | + | chr7_3:82424588-82424607 | Msa1130300:three_prime_UTR | 20.0% |
! | AGGTAAAATTGGGAAATAAT+TGG | - | chr7_3:82417609-82417628 | None:intergenic | 25.0% |
! | ATACTAGTACTAGAAGATAA+AGG | - | chr7_3:82417822-82417841 | None:intergenic | 25.0% |
!! | AGATTTAAAATACAAAGCAG+TGG | - | chr7_3:82417864-82417883 | None:intergenic | 25.0% |
! | TATGCACTTATTAGTAATAG+AGG | + | chr7_3:82418081-82418100 | Msa1130300:intron | 25.0% |
! | GAAGGAAGAAAATAGAAAAA+GGG | - | chr7_3:82418168-82418187 | None:intergenic | 25.0% |
! | TGAAGGAAGAAAATAGAAAA+AGG | - | chr7_3:82418169-82418188 | None:intergenic | 25.0% |
! | TCTTCCTTCAAACATTTATT+TGG | + | chr7_3:82418179-82418198 | Msa1130300:intron | 25.0% |
! | AGTACCAAATAAATGTTTGA+AGG | - | chr7_3:82418186-82418205 | None:intergenic | 25.0% |
! | TCAAACATTTATTTGGTACT+TGG | + | chr7_3:82418186-82418205 | Msa1130300:intron | 25.0% |
! | AAGGTTAAAAAAAAGACACA+TGG | - | chr7_3:82418444-82418463 | None:intergenic | 25.0% |
! | AAGAGAAATTTCCACAATAA+AGG | - | chr7_3:82418463-82418482 | None:intergenic | 25.0% |
! | ATGTAGCAATTGCTAAATTA+AGG | + | chr7_3:82418590-82418609 | Msa1130300:intron | 25.0% |
! | GGAACATTAATAACCAATTT+AGG | - | chr7_3:82418686-82418705 | None:intergenic | 25.0% |
! | TCAAAACTACTATTACTACT+AGG | + | chr7_3:82418715-82418734 | Msa1130300:intron | 25.0% |
! | CAAAACTACTATTACTACTA+GGG | + | chr7_3:82418716-82418735 | Msa1130300:intron | 25.0% |
! | AAAACTACTATTACTACTAG+GGG | + | chr7_3:82418717-82418736 | Msa1130300:intron | 25.0% |
!!! | AATAAGGTCGGATATTTTTT+CGG | - | chr7_3:82418795-82418814 | None:intergenic | 25.0% |
! | AAAAAATATCCGACCTTATT+TGG | + | chr7_3:82418795-82418814 | Msa1130300:intron | 25.0% |
! | GAAATTTCATGAAATTGATG+TGG | - | chr7_3:82419086-82419105 | None:intergenic | 25.0% |
!!! | TGTTTTAATTTCAGTTTGCA+TGG | + | chr7_3:82419143-82419162 | Msa1130300:intron | 25.0% |
!!! | AAGTTGTTTTTGAAGAATGA+TGG | + | chr7_3:82419279-82419298 | Msa1130300:intron | 25.0% |
! | TTCCAAATTGTAGTAATTAG+GGG | - | chr7_3:82419610-82419629 | None:intergenic | 25.0% |
!! | TTCGATGTAACCTTTATTTA+CGG | + | chr7_3:82419664-82419683 | Msa1130300:intron | 25.0% |
! | TAAAGGCTAAAATATGGTAT+TGG | + | chr7_3:82419756-82419775 | Msa1130300:intron | 25.0% |
!!! | TCCTGCAAAATTTTTGTTTT+TGG | + | chr7_3:82419962-82419981 | Msa1130300:intron | 25.0% |
!! | TCCAAAAACAAAAATTTTGC+AGG | - | chr7_3:82419966-82419985 | None:intergenic | 25.0% |
! | TGACAAATCATCACATAATT+GGG | - | chr7_3:82420002-82420021 | None:intergenic | 25.0% |
!!! | AAAACTGACCTATTTTTGTA+GGG | + | chr7_3:82420258-82420277 | Msa1130300:intron | 25.0% |
! | TTAAGGCTAAAATATGGAAT+TGG | - | chr7_3:82420345-82420364 | None:intergenic | 25.0% |
! | CTTAAATAAATATACACGCA+CGG | + | chr7_3:82420360-82420379 | Msa1130300:intron | 25.0% |
! | GGGATAAATAAATACAAACA+TGG | - | chr7_3:82420423-82420442 | None:intergenic | 25.0% |
! | TAATTACTAAAGATGCAGAA+AGG | + | chr7_3:82420686-82420705 | Msa1130300:CDS | 25.0% |
! | AATTACTAAAGATGCAGAAA+GGG | + | chr7_3:82420687-82420706 | Msa1130300:CDS | 25.0% |
! | TCAAGAATTCTACAGATAAA+AGG | - | chr7_3:82420850-82420869 | None:intergenic | 25.0% |
! | TTTATCTGTAGAATTCTTGA+TGG | + | chr7_3:82420850-82420869 | Msa1130300:CDS | 25.0% |
!! | TCATTCCATGGTATATATTT+TGG | - | chr7_3:82421051-82421070 | None:intergenic | 25.0% |
!! | TTTTCCGTTGTTTATACAAT+CGG | - | chr7_3:82421282-82421301 | None:intergenic | 25.0% |
! | AGAGAGTTTCCTATAAAAAA+TGG | + | chr7_3:82421580-82421599 | Msa1130300:intron | 25.0% |
! | GAGAGTTTCCTATAAAAAAT+GGG | + | chr7_3:82421581-82421600 | Msa1130300:intron | 25.0% |
!!! | AAGGCTTTAAACTTCATATA+CGG | + | chr7_3:82421604-82421623 | Msa1130300:CDS | 25.0% |
! | CTTTGTAATGATATAAGAGA+AGG | + | chr7_3:82421898-82421917 | Msa1130300:CDS | 25.0% |
! | ATAATCCACAAAAGATGTAT+AGG | + | chr7_3:82422003-82422022 | Msa1130300:CDS | 25.0% |
!! | TTAATCCTATACATCTTTTG+TGG | - | chr7_3:82422011-82422030 | None:intergenic | 25.0% |
!! | TTCAACATACTCTCTTTTAT+TGG | - | chr7_3:82422647-82422666 | None:intergenic | 25.0% |
!! | CATTTCTCTTTCATTTTGAA+CGG | + | chr7_3:82422819-82422838 | Msa1130300:intron | 25.0% |
! | GTTACATCATTTAACATTAG+GGG | - | chr7_3:82423180-82423199 | None:intergenic | 25.0% |
! | TGTTAAATGATGTAACAAAG+TGG | + | chr7_3:82423184-82423203 | Msa1130300:intron | 25.0% |
! | TATTTAAACTGCTGTAAATC+TGG | - | chr7_3:82423254-82423273 | None:intergenic | 25.0% |
!! | CATCATTACAGATTTAAAAC+TGG | - | chr7_3:82423288-82423307 | None:intergenic | 25.0% |
!! | TGGATGTATTTTATTATGCT+TGG | + | chr7_3:82423392-82423411 | Msa1130300:intron | 25.0% |
!! | ATGTATTTTATTATGCTTGG+TGG | + | chr7_3:82423395-82423414 | Msa1130300:intron | 25.0% |
! | CAATCAGTATGAATAAAAGA+TGG | - | chr7_3:82423426-82423445 | None:intergenic | 25.0% |
!! | TTATTTAATCGAGCTTTTCT+TGG | + | chr7_3:82423540-82423559 | Msa1130300:intron | 25.0% |
! | TATATTGTGCACATTCAATA+CGG | - | chr7_3:82423828-82423847 | None:intergenic | 25.0% |
!!! | ACTAAATTTCAGGTTTATAC+AGG | + | chr7_3:82423931-82423950 | Msa1130300:intron | 25.0% |
! | ACAATAATAACAATCGACAT+TGG | + | chr7_3:82424485-82424504 | Msa1130300:three_prime_UTR | 25.0% |
AACTCCAAAAACAAAACATG+TGG | - | chr7_3:82417428-82417447 | None:intergenic | 30.0% | |
GAAGTTGAAGATTCTTTGTT+GGG | - | chr7_3:82417475-82417494 | None:intergenic | 30.0% | |
TGAAGTTGAAGATTCTTTGT+TGG | - | chr7_3:82417476-82417495 | None:intergenic | 30.0% | |
!! | TGAAAATGAAATGATGGGTT+GGG | - | chr7_3:82417500-82417519 | None:intergenic | 30.0% |
!! | ATGAAAATGAAATGATGGGT+TGG | - | chr7_3:82417501-82417520 | None:intergenic | 30.0% |
TATTGAAGAAAGTGACCAAT+TGG | - | chr7_3:82417732-82417751 | None:intergenic | 30.0% | |
AGCTAAAGTTTATAGTACCT+GGG | - | chr7_3:82417787-82417806 | None:intergenic | 30.0% | |
AAGCTAAAGTTTATAGTACC+TGG | - | chr7_3:82417788-82417807 | None:intergenic | 30.0% | |
CAGATGAATTAGTGTATGTT+TGG | + | chr7_3:82417945-82417964 | Msa1130300:intron | 30.0% | |
CAATAAGAGTGGTAAAATCA+AGG | - | chr7_3:82418051-82418070 | None:intergenic | 30.0% | |
AGAGTAATAGTGGTAGAAAA+TGG | - | chr7_3:82418120-82418139 | None:intergenic | 30.0% | |
! | TTTTCTACCACTATTACTCT+AGG | + | chr7_3:82418120-82418139 | Msa1130300:intron | 30.0% |
! | CTAGAATGATAATGACAAGT+AGG | - | chr7_3:82418215-82418234 | None:intergenic | 30.0% |
CTTGTCATTATCATTCTAGA+TGG | + | chr7_3:82418216-82418235 | Msa1130300:intron | 30.0% | |
!!! | TTGTTTCTTTTGAAGTAGGT+AGG | + | chr7_3:82418359-82418378 | Msa1130300:intron | 30.0% |
!!! | TAGTAGTTTTGAGAAAGTGA+AGG | - | chr7_3:82418707-82418726 | None:intergenic | 30.0% |
!!! | GATATTTTTTCGGTTTGGTT+CGG | - | chr7_3:82418785-82418804 | None:intergenic | 30.0% |
GTTTCAAACCTAACCAAATA+AGG | - | chr7_3:82418811-82418830 | None:intergenic | 30.0% | |
!! | ATAAGGAGTGTTGTTATCAT+CGG | - | chr7_3:82418916-82418935 | None:intergenic | 30.0% |
! | GTTGATAAATGATGCATGTA+TGG | + | chr7_3:82419224-82419243 | Msa1130300:intron | 30.0% |
!! | TTTGAAGAATGATGGATGAA+TGG | + | chr7_3:82419287-82419306 | Msa1130300:intron | 30.0% |
! | TCGATGTAACCTTTATTTAC+GGG | + | chr7_3:82419665-82419684 | Msa1130300:intron | 30.0% |
!! | TTTTTGGTCCATGCAAAAAT+AGG | + | chr7_3:82419832-82419851 | Msa1130300:intron | 30.0% |
!!! | AAAACTGACCTATTTTTGCA+TGG | - | chr7_3:82419843-82419862 | None:intergenic | 30.0% |
GACAAATCATCACATAATTG+GGG | - | chr7_3:82420001-82420020 | None:intergenic | 30.0% | |
GTGACAAATCATCACATAAT+TGG | - | chr7_3:82420003-82420022 | None:intergenic | 30.0% | |
TGACAAATCATCACATAACT+GGG | + | chr7_3:82420158-82420177 | Msa1130300:intron | 30.0% | |
! | CTACAAAAATAGGTCAGTTT+TGG | - | chr7_3:82420259-82420278 | None:intergenic | 30.0% |
!!! | CAAAACTGACCTATTTTTGT+AGG | + | chr7_3:82420257-82420276 | Msa1130300:intron | 30.0% |
!! | TTTTTGGTCCCTACAAAAAT+AGG | - | chr7_3:82420269-82420288 | None:intergenic | 30.0% |
! | TAAAACTGACCTATTTTGCA+GGG | + | chr7_3:82420318-82420337 | Msa1130300:intron | 30.0% |
CGTGCGTGTATATTTATTTA+AGG | - | chr7_3:82420362-82420381 | None:intergenic | 30.0% | |
!! | AACATGGTCATTGATTTCTA+TGG | - | chr7_3:82420407-82420426 | None:intergenic | 30.0% |
TATACAGTGGTAGAAAAAGT+GGG | - | chr7_3:82420443-82420462 | None:intergenic | 30.0% | |
!!! | TACATTGTTTTGGTATACAG+TGG | - | chr7_3:82420456-82420475 | None:intergenic | 30.0% |
! | ATAGTCAATTTTTGACAGTG+AGG | - | chr7_3:82420515-82420534 | None:intergenic | 30.0% |
CTAAAGAAAACTCTGTTGAA+GGG | + | chr7_3:82420596-82420615 | Msa1130300:five_prime_UTR | 30.0% | |
TAAAGAAAACTCTGTTGAAG+GGG | + | chr7_3:82420597-82420616 | Msa1130300:five_prime_UTR | 30.0% | |
GAAAGTGAAAGAGTTTAACA+TGG | + | chr7_3:82420639-82420658 | Msa1130300:CDS | 30.0% | |
! | GGAAACACTCAAAAGAATTT+TGG | + | chr7_3:82420717-82420736 | Msa1130300:CDS | 30.0% |
! | GCTGAATATTTGCAGAATTT+TGG | + | chr7_3:82420754-82420773 | Msa1130300:CDS | 30.0% |
CTTAAAGACATAGTGGTAAT+AGG | - | chr7_3:82420904-82420923 | None:intergenic | 30.0% | |
CTATTACCACTATGTCTTTA+AGG | + | chr7_3:82420902-82420921 | Msa1130300:CDS | 30.0% | |
TCAAGGACTAATTAGATGAA+GGG | - | chr7_3:82420967-82420986 | None:intergenic | 30.0% | |
TTCAAGGACTAATTAGATGA+AGG | - | chr7_3:82420968-82420987 | None:intergenic | 30.0% | |
AGCGAAAATTTATGAGTTCA+AGG | - | chr7_3:82420984-82421003 | None:intergenic | 30.0% | |
TCAAACAATTCATCATTCCA+TGG | - | chr7_3:82421063-82421082 | None:intergenic | 30.0% | |
AAACCACAATGCAGATATAT+CGG | + | chr7_3:82421082-82421101 | Msa1130300:CDS | 30.0% | |
ATAAACAACGGAAAATGATG+CGG | + | chr7_3:82421287-82421306 | Msa1130300:intron | 30.0% | |
CAACTGTCAAATGTTATAGT+TGG | + | chr7_3:82421431-82421450 | Msa1130300:intron | 30.0% | |
GTTTCCTATAAAAAATGGGA+AGG | + | chr7_3:82421585-82421604 | Msa1130300:CDS | 30.0% | |
!!! | AAAGCCTTCCCATTTTTTAT+AGG | - | chr7_3:82421592-82421611 | None:intergenic | 30.0% |
AGCAAACAGTTCAAAACAAA+AGG | + | chr7_3:82421628-82421647 | Msa1130300:CDS | 30.0% | |
GCAAACAGTTCAAAACAAAA+GGG | + | chr7_3:82421629-82421648 | Msa1130300:CDS | 30.0% | |
CAAACAGTTCAAAACAAAAG+GGG | + | chr7_3:82421630-82421649 | Msa1130300:CDS | 30.0% | |
AAACAGTTCAAAACAAAAGG+GGG | + | chr7_3:82421631-82421650 | Msa1130300:CDS | 30.0% | |
TTCATTGCATGTTTGTAAGA+TGG | - | chr7_3:82421697-82421716 | None:intergenic | 30.0% | |
ATCTTACAAACATGCAATGA+AGG | + | chr7_3:82421696-82421715 | Msa1130300:CDS | 30.0% | |
CCATAAATGTACTTTGCATT+GGG | - | chr7_3:82422066-82422085 | None:intergenic | 30.0% | |
TACATTTATGGCATTATGAC+AGG | + | chr7_3:82422075-82422094 | Msa1130300:CDS | 30.0% | |
AACCATATTTGGTAAAACTG+AGG | + | chr7_3:82422106-82422125 | Msa1130300:CDS | 30.0% | |
AACTCAAAGTAACCAATTTG+AGG | - | chr7_3:82422246-82422265 | None:intergenic | 30.0% | |
ATAATTGAGTACTTACCTGT+TGG | - | chr7_3:82422381-82422400 | None:intergenic | 30.0% | |
GTAAGTACTCAATTATTGTC+CGG | + | chr7_3:82422385-82422404 | Msa1130300:intron | 30.0% | |
TTAAATCTGATAGTAGTCCT+TGG | - | chr7_3:82422468-82422487 | None:intergenic | 30.0% | |
! | TATCAGATTTAACTTTCCCA+TGG | + | chr7_3:82422476-82422495 | Msa1130300:intron | 30.0% |
TGAAACTTGTGTTAAAGAGT+GGG | - | chr7_3:82422537-82422556 | None:intergenic | 30.0% | |
TTGAAACTTGTGTTAAAGAG+TGG | - | chr7_3:82422538-82422557 | None:intergenic | 30.0% | |
ATGTGGGTCACATATATATT+TGG | - | chr7_3:82422601-82422620 | None:intergenic | 30.0% | |
ACCATAAAACATTTCACAAC+TGG | + | chr7_3:82422996-82423015 | Msa1130300:intron | 30.0% | |
! | TCCAGTTGTGAAATGTTTTA+TGG | - | chr7_3:82423000-82423019 | None:intergenic | 30.0% |
TTTAACATTAGGGGTCAAAA+AGG | - | chr7_3:82423171-82423190 | None:intergenic | 30.0% | |
!!! | TGCTATGTCATTTTCAACTT+TGG | + | chr7_3:82423598-82423617 | Msa1130300:intron | 30.0% |
!! | TATAAAAGTGCCATGAATCA+TGG | - | chr7_3:82423626-82423645 | None:intergenic | 30.0% |
AACCTGAAATTTAGTCACAA+AGG | - | chr7_3:82423926-82423945 | None:intergenic | 30.0% | |
!! | TTTCAGGTTTATACAGGTAT+AGG | + | chr7_3:82423937-82423956 | Msa1130300:intron | 30.0% |
! | CTACGAATAAACTTTAGTTC+TGG | - | chr7_3:82424005-82424024 | None:intergenic | 30.0% |
CAGAACTAAAGTTTATTCGT+AGG | + | chr7_3:82424003-82424022 | Msa1130300:CDS | 30.0% | |
GTTCTTTGGATAAATCAACA+TGG | - | chr7_3:82424148-82424167 | None:intergenic | 30.0% | |
TTGATTTATCCAAAGAACCA+GGG | + | chr7_3:82424150-82424169 | Msa1130300:CDS | 30.0% | |
AAGATTCTTGATCATTACCT+TGG | + | chr7_3:82424341-82424360 | Msa1130300:CDS | 30.0% | |
TATAAAACACCAAGATGTGT+AGG | + | chr7_3:82424386-82424405 | Msa1130300:CDS | 30.0% | |
CAAAAACAAAACATGTGGAG+TGG | - | chr7_3:82417423-82417442 | None:intergenic | 35.0% | |
!!! | CACTCCACATGTTTTGTTTT+TGG | + | chr7_3:82417421-82417440 | Msa1130300:five_prime_UTR | 35.0% |
TGGGAGATGGAATAGTAAAT+TGG | - | chr7_3:82417456-82417475 | None:intergenic | 35.0% | |
GGAAATAATTGGTTGTGACT+TGG | - | chr7_3:82417598-82417617 | None:intergenic | 35.0% | |
CAGAGACAGAGTATAGTATT+AGG | - | chr7_3:82417629-82417648 | None:intergenic | 35.0% | |
CTAGTGAGTTTGTGTATGTA+TGG | - | chr7_3:82417654-82417673 | None:intergenic | 35.0% | |
CTCACTAGTAGTTCCTTAAT+TGG | + | chr7_3:82417666-82417685 | Msa1130300:five_prime_UTR | 35.0% | |
! | GCTGACTCTAATTCCAATTA+AGG | - | chr7_3:82417682-82417701 | None:intergenic | 35.0% |
! | AACCTTCCTTTTCATCCAAT+TGG | + | chr7_3:82417714-82417733 | Msa1130300:five_prime_UTR | 35.0% |
AAGTGACCAATTGGATGAAA+AGG | - | chr7_3:82417723-82417742 | None:intergenic | 35.0% | |
GCTAAAGTTTATAGTACCTG+GGG | - | chr7_3:82417786-82417805 | None:intergenic | 35.0% | |
!! | ATTTGGACTAGCAATAAGAG+TGG | - | chr7_3:82418062-82418081 | None:intergenic | 35.0% |
TTTGATGCCTAGAGTAATAG+TGG | - | chr7_3:82418130-82418149 | None:intergenic | 35.0% | |
!! | TGGCTCTAATCCAATTTGAT+TGG | + | chr7_3:82418236-82418255 | Msa1130300:intron | 35.0% |
GATCTTTGCTAAGCCTAAAT+TGG | + | chr7_3:82418670-82418689 | Msa1130300:intron | 35.0% | |
! | ATATCCGACCTTATTTGGTT+AGG | + | chr7_3:82418800-82418819 | Msa1130300:intron | 35.0% |
CAAACCTAACCAAATAAGGT+CGG | - | chr7_3:82418807-82418826 | None:intergenic | 35.0% | |
TGAACCAAACCAAACTAGAT+CGG | - | chr7_3:82418853-82418872 | None:intergenic | 35.0% | |
!! | ATCTAGTTTGGTTTGGTTCA+TGG | + | chr7_3:82418853-82418872 | Msa1130300:intron | 35.0% |
TGAAGATGAGAGAAAGTGAA+TGG | - | chr7_3:82419010-82419029 | None:intergenic | 35.0% | |
CATGAAATTGATGTGGTTGA+CGG | - | chr7_3:82419079-82419098 | None:intergenic | 35.0% | |
!! | AATGATGGATGAATGGATCT+TGG | + | chr7_3:82419294-82419313 | Msa1130300:intron | 35.0% |
AGAAACCGAACCAAACTAAT+CGG | - | chr7_3:82419486-82419505 | None:intergenic | 35.0% | |
! | TGTAGTAATTAGGGGTGTAA+CGG | - | chr7_3:82419602-82419621 | None:intergenic | 35.0% |
CACCCCTAATTACTACAATT+TGG | + | chr7_3:82419605-82419624 | Msa1130300:intron | 35.0% | |
CTTTAGTGTTCCTATCTCAA+AGG | + | chr7_3:82419641-82419660 | Msa1130300:intron | 35.0% | |
!! | TTACATCGAACCTTTGAGAT+AGG | - | chr7_3:82419654-82419673 | None:intergenic | 35.0% |
! | CAAAACTGACCTATTTTGCA+GGG | - | chr7_3:82419783-82419802 | None:intergenic | 35.0% |
!! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr7_3:82419892-82419911 | Msa1130300:intron | 35.0% |
!!! | AAAACTGGCCTATTTTTGCA+GGG | - | chr7_3:82419903-82419922 | None:intergenic | 35.0% |
!!! | TTGTCACTTTTGTGCATATG+TGG | + | chr7_3:82420016-82420035 | Msa1130300:intron | 35.0% |
GTGACAAATCATCACATAAC+TGG | + | chr7_3:82420157-82420176 | Msa1130300:intron | 35.0% | |
GACAAATCATCACATAACTG+GGG | + | chr7_3:82420159-82420178 | Msa1130300:intron | 35.0% | |
! | CTAAAACTGACCTATTTTGC+AGG | + | chr7_3:82420317-82420336 | Msa1130300:intron | 35.0% |
GTATACAGTGGTAGAAAAAG+TGG | - | chr7_3:82420444-82420463 | None:intergenic | 35.0% | |
GCTAAAGAAAACTCTGTTGA+AGG | + | chr7_3:82420595-82420614 | Msa1130300:five_prime_UTR | 35.0% | |
!!! | TTGCAGAATTTTGGTCTTGA+TGG | + | chr7_3:82420763-82420782 | Msa1130300:CDS | 35.0% |
! | ATAGGTTTTCCAGTGAGAAT+GGG | - | chr7_3:82420886-82420905 | None:intergenic | 35.0% |
! | AATAGGTTTTCCAGTGAGAA+TGG | - | chr7_3:82420887-82420906 | None:intergenic | 35.0% |
ACAACACCTTAAAGACATAG+TGG | - | chr7_3:82420911-82420930 | None:intergenic | 35.0% | |
CAAGGACTAATTAGATGAAG+GGG | - | chr7_3:82420966-82420985 | None:intergenic | 35.0% | |
GGAAGCCAAAATATATACCA+TGG | + | chr7_3:82421043-82421062 | Msa1130300:CDS | 35.0% | |
ATCGGCTACTAAACTATGAT+TGG | - | chr7_3:82421264-82421283 | None:intergenic | 35.0% | |
GTAGCCGATTGTATAAACAA+CGG | + | chr7_3:82421275-82421294 | Msa1130300:intron | 35.0% | |
! | TACCATGCCTTTTTGCTAAT+TGG | + | chr7_3:82421527-82421546 | Msa1130300:intron | 35.0% |
! | CCTTTTTGCTAATTGGAGTT+GGG | + | chr7_3:82421534-82421553 | Msa1130300:intron | 35.0% |
AGTCCAGATGAAGTGATATT+TGG | + | chr7_3:82421739-82421758 | Msa1130300:CDS | 35.0% | |
TTTAGACATAGCAGTTCGAA+TGG | - | chr7_3:82421953-82421972 | None:intergenic | 35.0% | |
!! | ATGTTAGCTAGTTCTGGATT+TGG | - | chr7_3:82421985-82422004 | None:intergenic | 35.0% |
TGGATTATGTTAGCTAGTTC+TGG | - | chr7_3:82421991-82422010 | None:intergenic | 35.0% | |
GATGTATAGGATTAAGCAAC+TGG | + | chr7_3:82422016-82422035 | Msa1130300:CDS | 35.0% | |
ATAGGATTAAGCAACTGGTA+TGG | + | chr7_3:82422021-82422040 | Msa1130300:CDS | 35.0% | |
CCCAATGCAAAGTACATTTA+TGG | + | chr7_3:82422063-82422082 | Msa1130300:CDS | 35.0% | |
GCCATAAATGTACTTTGCAT+TGG | - | chr7_3:82422067-82422086 | None:intergenic | 35.0% | |
AGGTTCTATGGAACCATATT+TGG | + | chr7_3:82422095-82422114 | Msa1130300:CDS | 35.0% | |
! | TGCCTCAGTTTTACCAAATA+TGG | - | chr7_3:82422111-82422130 | None:intergenic | 35.0% |
! | CCAATTCAGGTGGAATTTTT+GGG | - | chr7_3:82422206-82422225 | None:intergenic | 35.0% |
ATGAATCAGTACTACTACCA+AGG | + | chr7_3:82422448-82422467 | Msa1130300:intron | 35.0% | |
! | AGATTTAACTTTCCCATGGT+GGG | + | chr7_3:82422480-82422499 | Msa1130300:intron | 35.0% |
TATATGTGACCCACATGATT+TGG | + | chr7_3:82422605-82422624 | Msa1130300:intron | 35.0% | |
TAGATCACACCAAATCATGT+GGG | - | chr7_3:82422617-82422636 | None:intergenic | 35.0% | |
ATAGATCACACCAAATCATG+TGG | - | chr7_3:82422618-82422637 | None:intergenic | 35.0% | |
GATTTACACGTAAGAGAGTA+GGG | - | chr7_3:82422857-82422876 | None:intergenic | 35.0% | |
TGATTTACACGTAAGAGAGT+AGG | - | chr7_3:82422858-82422877 | None:intergenic | 35.0% | |
GCAAAACAATGTTTGTGGTT+TGG | - | chr7_3:82422936-82422955 | None:intergenic | 35.0% | |
AAGTGGCAAAACAATGTTTG+TGG | - | chr7_3:82422941-82422960 | None:intergenic | 35.0% | |
!! | TTTTGCCACTTACTATGAGT+AGG | + | chr7_3:82422950-82422969 | Msa1130300:intron | 35.0% |
ATCTACCTACTCATAGTAAG+TGG | - | chr7_3:82422958-82422977 | None:intergenic | 35.0% | |
GTAGATTGTTAGTGCAAGTT+TGG | + | chr7_3:82422972-82422991 | Msa1130300:intron | 35.0% | |
GAGATGCTTGAAGTTTAAGT+AGG | + | chr7_3:82423131-82423150 | Msa1130300:intron | 35.0% | |
! | GCTTTTCTTGGAGTTGAAAT+TGG | + | chr7_3:82423552-82423571 | Msa1130300:intron | 35.0% |
TGAAAATGACATAGCAGATG+AGG | - | chr7_3:82423594-82423613 | None:intergenic | 35.0% | |
! | AACTTTGGTTCCATGATTCA+TGG | + | chr7_3:82423613-82423632 | Msa1130300:intron | 35.0% |
TGTTGATATAACCTATGCCA+AGG | + | chr7_3:82423679-82423698 | Msa1130300:intron | 35.0% | |
ATGAAACTATGATGTGTCCT+TGG | - | chr7_3:82423699-82423718 | None:intergenic | 35.0% | |
! | GATTTTCAGCAAAGTCTCAT+TGG | + | chr7_3:82423783-82423802 | Msa1130300:intron | 35.0% |
CACCTTTGTGACTAAATTTC+AGG | + | chr7_3:82423921-82423940 | Msa1130300:intron | 35.0% | |
GTTTATACAGGTATAGGCTA+GGG | + | chr7_3:82423943-82423962 | Msa1130300:CDS | 35.0% | |
TTTATACAGGTATAGGCTAG+GGG | + | chr7_3:82423944-82423963 | Msa1130300:CDS | 35.0% | |
!! | TTAGTTCTGGAGTTGAGTTA+TGG | - | chr7_3:82423992-82424011 | None:intergenic | 35.0% |
! | GTTGATTTATCCAAAGAACC+AGG | + | chr7_3:82424149-82424168 | Msa1130300:CDS | 35.0% |
! | TAATCTTCTGGGAAATCAGT+GGG | + | chr7_3:82424180-82424199 | Msa1130300:CDS | 35.0% |
TCTCGTAAAGTCAACTCTAT+TGG | + | chr7_3:82424278-82424297 | Msa1130300:CDS | 35.0% | |
CTTGATCATTACCTTGGATT+AGG | + | chr7_3:82424347-82424366 | Msa1130300:CDS | 35.0% | |
GAAGATTCTTTGTTGGGAGA+TGG | - | chr7_3:82417469-82417488 | None:intergenic | 40.0% | |
ATGGCTAGTAGTAGAGTAGT+AGG | - | chr7_3:82417572-82417591 | None:intergenic | 40.0% | |
GACCAATTGGATGAAAAGGA+AGG | - | chr7_3:82417719-82417738 | None:intergenic | 40.0% | |
AAAGTTTATAGTACCTGGGG+TGG | - | chr7_3:82417783-82417802 | None:intergenic | 40.0% | |
TACAAAGCAGTGGTAACTGT+GGG | - | chr7_3:82417854-82417873 | None:intergenic | 40.0% | |
ATACAAAGCAGTGGTAACTG+TGG | - | chr7_3:82417855-82417874 | None:intergenic | 40.0% | |
! | ATTACTACTAGGGGTGTAAG+TGG | + | chr7_3:82418726-82418745 | Msa1130300:intron | 40.0% |
!! | TTTGGTTCGGTTTGGACTTT+CGG | - | chr7_3:82418772-82418791 | None:intergenic | 40.0% |
!!! | TTTTTCGGTTTGGTTCGGTT+TGG | - | chr7_3:82418780-82418799 | None:intergenic | 40.0% |
!!! | GGTCGGATATTTTTTCGGTT+TGG | - | chr7_3:82418790-82418809 | None:intergenic | 40.0% |
! | TAGATCGGTTTCGATTGGTT+CGG | - | chr7_3:82418838-82418857 | None:intergenic | 40.0% |
! | CAAACTAGATCGGTTTCGAT+TGG | - | chr7_3:82418843-82418862 | None:intergenic | 40.0% |
CAATCGAAACCGATCTAGTT+TGG | + | chr7_3:82418841-82418860 | Msa1130300:intron | 40.0% | |
! | GAAACCGATCTAGTTTGGTT+TGG | + | chr7_3:82418846-82418865 | Msa1130300:intron | 40.0% |
! | TTATCATCGGATCGGTTCAT+CGG | - | chr7_3:82418903-82418922 | None:intergenic | 40.0% |
! | GAGTGTTGTTATCATCGGAT+CGG | - | chr7_3:82418911-82418930 | None:intergenic | 40.0% |
TCCTACCACACACAAACTTA+TGG | + | chr7_3:82418949-82418968 | Msa1130300:intron | 40.0% | |
ACCATAAGTTTGTGTGTGGT+AGG | - | chr7_3:82418953-82418972 | None:intergenic | 40.0% | |
CCTAACCATAAGTTTGTGTG+TGG | - | chr7_3:82418957-82418976 | None:intergenic | 40.0% | |
CCACACACAAACTTATGGTT+AGG | + | chr7_3:82418954-82418973 | Msa1130300:intron | 40.0% | |
ATGAAAGAGTCTGACTGATG+AGG | - | chr7_3:82419033-82419052 | None:intergenic | 40.0% | |
!! | TTTGGATTGGTTCGGTTGAT+CGG | - | chr7_3:82419453-82419472 | None:intergenic | 40.0% |
!! | CCAAACTAATCGGTTTGGTT+CGG | - | chr7_3:82419476-82419495 | None:intergenic | 40.0% |
!! | CCAAACCGATTAGTTTGGTT+CGG | + | chr7_3:82419478-82419497 | Msa1130300:intron | 40.0% |
!! | TTCATCGGTTTGGATTGGTT+CGG | - | chr7_3:82419529-82419548 | None:intergenic | 40.0% |
!! | AAACCTTCATCGGTTTGGAT+TGG | - | chr7_3:82419534-82419553 | None:intergenic | 40.0% |
! | CAATGAAACCTTCATCGGTT+TGG | - | chr7_3:82419539-82419558 | None:intergenic | 40.0% |
CAAACCGATGAAGGTTTCAT+TGG | + | chr7_3:82419537-82419556 | Msa1130300:intron | 40.0% | |
CGAACCAATGAAACCTTCAT+CGG | - | chr7_3:82419544-82419563 | None:intergenic | 40.0% | |
! | CGATGAAGGTTTCATTGGTT+CGG | + | chr7_3:82419542-82419561 | Msa1130300:intron | 40.0% |
! | TAATTAGGGGTGTAACGGTT+CGG | - | chr7_3:82419597-82419616 | None:intergenic | 40.0% |
GATAAGGGTCCCGTAAATAA+AGG | - | chr7_3:82419677-82419696 | None:intergenic | 40.0% | |
! | CCAAAACTGACCTATTTTGC+AGG | - | chr7_3:82419784-82419803 | None:intergenic | 40.0% |
! | CCTGCAAAATAGGTCAGTTT+TGG | + | chr7_3:82419781-82419800 | Msa1130300:intron | 40.0% |
!!! | CAAAACTGGCCTATTTTTGC+AGG | - | chr7_3:82419904-82419923 | None:intergenic | 40.0% |
! | CTGCAAAAATAGGCCAGTTT+TGG | + | chr7_3:82419902-82419921 | Msa1130300:intron | 40.0% |
TCATCACATAATTGGGGTCA+GGG | - | chr7_3:82419995-82420014 | None:intergenic | 40.0% | |
ATCATCACATAATTGGGGTC+AGG | - | chr7_3:82419996-82420015 | None:intergenic | 40.0% | |
AAGTCTTTGTGAGTAGCTAG+TGG | - | chr7_3:82420823-82420842 | None:intergenic | 40.0% | |
ACTAGCTACTCACAAAGACT+TGG | + | chr7_3:82420822-82420841 | Msa1130300:CDS | 40.0% | |
AGATGAAGACCTGTTCCTAT+AGG | - | chr7_3:82421118-82421137 | None:intergenic | 40.0% | |
TGTTCATCAGTCATGCTATG+TGG | - | chr7_3:82421377-82421396 | None:intergenic | 40.0% | |
CTCCAATTAGCAAAAAGGCA+TGG | - | chr7_3:82421532-82421551 | None:intergenic | 40.0% | |
! | GCCTTTTTGCTAATTGGAGT+TGG | + | chr7_3:82421533-82421552 | Msa1130300:intron | 40.0% |
CCCAACTCCAATTAGCAAAA+AGG | - | chr7_3:82421537-82421556 | None:intergenic | 40.0% | |
ATAGGAAACTCTCTGCAGAA+AGG | - | chr7_3:82421574-82421593 | None:intergenic | 40.0% | |
CCAGATGAAGTGATATTTGG+CGG | + | chr7_3:82421742-82421761 | Msa1130300:CDS | 40.0% | |
ATACCAATTGAACTTCCTCG+CGG | - | chr7_3:82421816-82421835 | None:intergenic | 40.0% | |
TCAGAGCCTTTGAACAAGTT+TGG | + | chr7_3:82421869-82421888 | Msa1130300:CDS | 40.0% | |
CAGAGCCTTTGAACAAGTTT+GGG | + | chr7_3:82421870-82421889 | Msa1130300:CDS | 40.0% | |
! | CTCTTCCCAAACTTGTTCAA+AGG | - | chr7_3:82421878-82421897 | None:intergenic | 40.0% |
TTTGCATTGGGAAAAAGCTC+TGG | - | chr7_3:82422054-82422073 | None:intergenic | 40.0% | |
TGGCATTATGACAGGTTCTA+TGG | + | chr7_3:82422083-82422102 | Msa1130300:CDS | 40.0% | |
CCCAAAAATTCCACCTGAAT+TGG | + | chr7_3:82422203-82422222 | Msa1130300:CDS | 40.0% | |
! | GCCAATTCAGGTGGAATTTT+TGG | - | chr7_3:82422207-82422226 | None:intergenic | 40.0% |
ACAGCATAAGTTGCCAATTC+AGG | - | chr7_3:82422219-82422238 | None:intergenic | 40.0% | |
TATGCTGTGCTTCCTCAAAT+TGG | + | chr7_3:82422231-82422250 | Msa1130300:CDS | 40.0% | |
ATTGTTATGACCACTCCAAC+AGG | + | chr7_3:82422363-82422382 | Msa1130300:CDS | 40.0% | |
! | CAGATTTAACTTTCCCATGG+TGG | + | chr7_3:82422479-82422498 | Msa1130300:intron | 40.0% |
! | GATTTAACTTTCCCATGGTG+GGG | + | chr7_3:82422481-82422500 | Msa1130300:intron | 40.0% |
GTGGCATTTAGTATGGGAAA+GGG | - | chr7_3:82422515-82422534 | None:intergenic | 40.0% | |
AACTTGTGTTAAAGAGTGGG+TGG | - | chr7_3:82422534-82422553 | None:intergenic | 40.0% | |
! | TACGAATGTTACTTGCACTG+TGG | + | chr7_3:82422704-82422723 | Msa1130300:intron | 40.0% |
TTAAATGCTCTTGGCACCTT+AGG | + | chr7_3:82423050-82423069 | Msa1130300:intron | 40.0% | |
!! | TCTCTTAACTGTGCTACTTC+AGG | - | chr7_3:82423211-82423230 | None:intergenic | 40.0% |
TATGACACGTGCTTACTTTG+TGG | + | chr7_3:82423372-82423391 | Msa1130300:intron | 40.0% | |
GGTTTATACAGGTATAGGCT+AGG | + | chr7_3:82423942-82423961 | Msa1130300:intron | 40.0% | |
AGGGGATGTGGTAAAAGTTA+TGG | + | chr7_3:82423962-82423981 | Msa1130300:CDS | 40.0% | |
GGGGATGTGGTAAAAGTTAT+GGG | + | chr7_3:82423963-82423982 | Msa1130300:CDS | 40.0% | |
GAAAGATTTACAGTTAGCCG+TGG | + | chr7_3:82424067-82424086 | Msa1130300:CDS | 40.0% | |
AGGGAACTACGTAATCTTCT+GGG | + | chr7_3:82424169-82424188 | Msa1130300:CDS | 40.0% | |
! | GTAATCTTCTGGGAAATCAG+TGG | + | chr7_3:82424179-82424198 | Msa1130300:CDS | 40.0% |
! | AATCTTCTGGGAAATCAGTG+GGG | + | chr7_3:82424181-82424200 | Msa1130300:CDS | 40.0% |
CTATTGGAGCCTTAGAACTT+CGG | + | chr7_3:82424294-82424313 | Msa1130300:CDS | 40.0% | |
TATTGGAGCCTTAGAACTTC+GGG | + | chr7_3:82424295-82424314 | Msa1130300:CDS | 40.0% | |
TAACAGCTGTTCCTAATCCA+AGG | - | chr7_3:82424361-82424380 | None:intergenic | 40.0% | |
TGCAACACAATGTTGTGTGT+AGG | - | chr7_3:82424413-82424432 | None:intergenic | 40.0% | |
!! | AGTAGGTGGTGTGTTGTTTG+TGG | - | chr7_3:82417555-82417574 | None:intergenic | 45.0% |
GCTAGTAGTAGAGTAGTAGG+TGG | - | chr7_3:82417569-82417588 | None:intergenic | 45.0% | |
! | ATTGGTTGTGACTTGGCACA+TGG | - | chr7_3:82417591-82417610 | None:intergenic | 45.0% |
ACAAAGCAGTGGTAACTGTG+GGG | - | chr7_3:82417853-82417872 | None:intergenic | 45.0% | |
! | TACTAGGGGTGTAAGTGGTT+CGG | + | chr7_3:82418731-82418750 | Msa1130300:intron | 45.0% |
GTTTGGACTTTCGGTTTCGT+TGG | - | chr7_3:82418763-82418782 | None:intergenic | 45.0% | |
AATTGATGTGGTTGACGGCT+AGG | - | chr7_3:82419074-82419093 | None:intergenic | 45.0% | |
!! | TGGTTCGGTTTGGATTGGTT+CGG | - | chr7_3:82419461-82419480 | None:intergenic | 45.0% |
!! | CTAATCGGTTTGGTTCGGTT+TGG | - | chr7_3:82419471-82419490 | None:intergenic | 45.0% |
! | CCGAACCAAACCGATTAGTT+TGG | + | chr7_3:82419473-82419492 | Msa1130300:intron | 45.0% |
CCGAACCAAACTAATCGGTT+TGG | - | chr7_3:82419481-82419500 | None:intergenic | 45.0% | |
GAACCAATCCAAACCGATGA+AGG | + | chr7_3:82419528-82419547 | Msa1130300:intron | 45.0% | |
! | TGTAACGGTTCGGATTGGAT+TGG | - | chr7_3:82419587-82419606 | None:intergenic | 45.0% |
!! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr7_3:82419771-82419790 | Msa1130300:intron | 45.0% |
GCAGGGACTAAAACCAAAAC+TGG | - | chr7_3:82419918-82419937 | None:intergenic | 45.0% | |
TCATCACATAACTGGGGTCA+TGG | + | chr7_3:82420165-82420184 | Msa1130300:intron | 45.0% | |
CATCACATAACTGGGGTCAT+GGG | + | chr7_3:82420166-82420185 | Msa1130300:intron | 45.0% | |
GGAATTGGTCCCTGCAAAAT+AGG | - | chr7_3:82420330-82420349 | None:intergenic | 45.0% | |
AAGATGCAGAAAGGGTTCAG+AGG | + | chr7_3:82420695-82420714 | Msa1130300:CDS | 45.0% | |
AGATGCAGAAAGGGTTCAGA+GGG | + | chr7_3:82420696-82420715 | Msa1130300:CDS | 45.0% | |
GGTCCGATATATCTGCATTG+TGG | - | chr7_3:82421088-82421107 | None:intergenic | 45.0% | |
! | ATCGGACCTCTTTTGCCTAT+AGG | + | chr7_3:82421100-82421119 | Msa1130300:CDS | 45.0% |
CCTGTTCCTATAGGCAAAAG+AGG | - | chr7_3:82421109-82421128 | None:intergenic | 45.0% | |
! | CCTCTTTTGCCTATAGGAAC+AGG | + | chr7_3:82421106-82421125 | Msa1130300:CDS | 45.0% |
CCGCCAAATATCACTTCATC+TGG | - | chr7_3:82421745-82421764 | None:intergenic | 45.0% | |
TTTCCGCGAGGAAGTTCAAT+TGG | + | chr7_3:82421810-82421829 | Msa1130300:CDS | 45.0% | |
GACATAGCAGTTCGAATGGA+GGG | - | chr7_3:82421949-82421968 | None:intergenic | 45.0% | |
AGACATAGCAGTTCGAATGG+AGG | - | chr7_3:82421950-82421969 | None:intergenic | 45.0% | |
! | GTAAAACTGAGGCACTATGC+AGG | + | chr7_3:82422117-82422136 | Msa1130300:CDS | 45.0% |
CCATAGTCAGCAGTACACAA+AGG | - | chr7_3:82422150-82422169 | None:intergenic | 45.0% | |
! | CCTTTGTGTACTGCTGACTA+TGG | + | chr7_3:82422147-82422166 | Msa1130300:CDS | 45.0% |
CTGACTATGGAGCTTCTGAA+GGG | + | chr7_3:82422160-82422179 | Msa1130300:CDS | 45.0% | |
GCATAAGTTGCCAATTCAGG+TGG | - | chr7_3:82422216-82422235 | None:intergenic | 45.0% | |
TCATTCTCAAGCTGTGTGAG+AGG | - | chr7_3:82422273-82422292 | None:intergenic | 45.0% | |
CCTTTGTGTTAATCCTCAGC+CGG | + | chr7_3:82422302-82422321 | Msa1130300:CDS | 45.0% | |
GGACTCACTGAGGTTAAAGT+TGG | + | chr7_3:82422327-82422346 | Msa1130300:CDS | 45.0% | |
TGAGTACTTACCTGTTGGAG+TGG | - | chr7_3:82422376-82422395 | None:intergenic | 45.0% | |
GGTGGCATTTAGTATGGGAA+AGG | - | chr7_3:82422516-82422535 | None:intergenic | 45.0% | |
GAGTGGGTGGCATTTAGTAT+GGG | - | chr7_3:82422521-82422540 | None:intergenic | 45.0% | |
AGAGTGGGTGGCATTTAGTA+TGG | - | chr7_3:82422522-82422541 | None:intergenic | 45.0% | |
TGGCGCAGAGTATAAAACTG+TGG | + | chr7_3:82422724-82422743 | Msa1130300:intron | 45.0% | |
GGCGCAGAGTATAAAACTGT+GGG | + | chr7_3:82422725-82422744 | Msa1130300:intron | 45.0% | |
TGACATAGCAGATGAGGTCA+AGG | - | chr7_3:82423588-82423607 | None:intergenic | 45.0% | |
CTATGATGTGTCCTTGGCAT+AGG | - | chr7_3:82423693-82423712 | None:intergenic | 45.0% | |
! | TAATTTTGCCGCTGCTTCCA+CGG | - | chr7_3:82424087-82424106 | None:intergenic | 45.0% |
! | TACGTAGTTCCCTGGTTCTT+TGG | - | chr7_3:82424162-82424181 | None:intergenic | 45.0% |
CAGAAGATTACGTAGTTCCC+TGG | - | chr7_3:82424170-82424189 | None:intergenic | 45.0% | |
CAGGGAACTACGTAATCTTC+TGG | + | chr7_3:82424168-82424187 | Msa1130300:CDS | 45.0% | |
GAGTGAATGCTGCAACTGTT+TGG | + | chr7_3:82424223-82424242 | Msa1130300:CDS | 45.0% | |
! | GACAAGTCTTTTGTCGATGC+AGG | + | chr7_3:82424245-82424264 | Msa1130300:CDS | 45.0% |
CCTAACAACCCGAAGTTCTA+AGG | - | chr7_3:82424306-82424325 | None:intergenic | 45.0% | |
!! | CCTTAGAACTTCGGGTTGTT+AGG | + | chr7_3:82424303-82424322 | Msa1130300:CDS | 45.0% |
!! | GAACTTCGGGTTGTTAGGAA+AGG | + | chr7_3:82424308-82424327 | Msa1130300:CDS | 45.0% |
TGTGTAGGACCTACACATCT+TGG | - | chr7_3:82424398-82424417 | None:intergenic | 45.0% | |
CCTACCTGCCCAAGTATATT+CGG | + | chr7_3:82424618-82424637 | Msa1130300:three_prime_UTR | 45.0% | |
!!! | ATTTTATAAAATTTTTTTTG+GGG | - | chr7_3:82418275-82418294 | None:intergenic | 5.0% |
!!! | GATTTTATAAAATTTTTTTT+GGG | - | chr7_3:82418276-82418295 | None:intergenic | 5.0% |
!!! | TGATTTTATAAAATTTTTTT+TGG | - | chr7_3:82418277-82418296 | None:intergenic | 5.0% |
!!! | TTTTATAAAATCATTTTTAT+TGG | + | chr7_3:82418284-82418303 | Msa1130300:intron | 5.0% |
!!! | TAAATTTTTTTTATAGTTTT+TGG | + | chr7_3:82419816-82419835 | Msa1130300:intron | 5.0% |
!!! | AATTTTTTTTTTATAGTTTT+TGG | + | chr7_3:82419939-82419958 | Msa1130300:intron | 5.0% |
!!! | TAAATTTTTTTTATAGTTTT+TGG | - | chr7_3:82419816-82419835 | None:intergenic | 5.0% |
ACTAAATTCTCTGCCACCCC+AGG | + | chr7_3:82417767-82417786 | Msa1130300:five_prime_UTR | 50.0% | |
!! | GGATCGGTTCATCGGTTTCA+CGG | - | chr7_3:82418895-82418914 | None:intergenic | 50.0% |
!! | CGGTTTGGTTCGGTTTGGAT+TGG | - | chr7_3:82419466-82419485 | None:intergenic | 50.0% |
! | CTGTTGAAGGGGTGTGAGTT+AGG | + | chr7_3:82420608-82420627 | Msa1130300:five_prime_UTR | 50.0% |
GATGCTTCTCCCATTCTCAC+TGG | + | chr7_3:82420874-82420893 | Msa1130300:CDS | 50.0% | |
GAACCGTACTCTTGCAGTTC+TGG | + | chr7_3:82421009-82421028 | Msa1130300:intron | 50.0% | |
GTGCCAGAACTGCAAGAGTA+CGG | - | chr7_3:82421015-82421034 | None:intergenic | 50.0% | |
!! | ATGCGGACTAATTTTCCGCG+AGG | + | chr7_3:82421798-82421817 | Msa1130300:CDS | 50.0% |
AGCAGTTCGAATGGAGGGAA+CGG | - | chr7_3:82421944-82421963 | None:intergenic | 50.0% | |
GCTGACTATGGAGCTTCTGA+AGG | + | chr7_3:82422159-82422178 | Msa1130300:CDS | 50.0% | |
! | ACTATGGAGCTTCTGAAGGG+TGG | + | chr7_3:82422163-82422182 | Msa1130300:CDS | 50.0% |
CCGGCTGAGGATTAACACAA+AGG | - | chr7_3:82422305-82422324 | None:intergenic | 50.0% | |
TTGTGTTAATCCTCAGCCGG+TGG | + | chr7_3:82422305-82422324 | Msa1130300:CDS | 50.0% | |
TGTGTTAATCCTCAGCCGGT+GGG | + | chr7_3:82422306-82422325 | Msa1130300:CDS | 50.0% | |
TTAACCTCAGTGAGTCCCAC+CGG | - | chr7_3:82422324-82422343 | None:intergenic | 50.0% | |
TCCATTTGCTTCCCTAGACC+CGG | + | chr7_3:82422898-82422917 | Msa1130300:intron | 50.0% | |
CCGAATATACTTGGGCAGGT+AGG | - | chr7_3:82424621-82424640 | None:intergenic | 50.0% | |
! | AGGGGTGTAACGGTTCGGAT+TGG | - | chr7_3:82419592-82419611 | None:intergenic | 55.0% |
! | TGCAGTTCTGGCACTACGCA+AGG | + | chr7_3:82421021-82421040 | Msa1130300:intron | 55.0% |
! | GCAGTTCTGGCACTACGCAA+GGG | + | chr7_3:82421022-82421041 | Msa1130300:intron | 55.0% |
GGGTAAGAGTTCCCCACCAT+GGG | - | chr7_3:82422495-82422514 | None:intergenic | 55.0% | |
AGGGTAAGAGTTCCCCACCA+TGG | - | chr7_3:82422496-82422515 | None:intergenic | 55.0% | |
ACCGGGTCTAGGGAAGCAAA+TGG | - | chr7_3:82422902-82422921 | None:intergenic | 55.0% | |
ATTTGCTTCCCTAGACCCGG+TGG | + | chr7_3:82422901-82422920 | Msa1130300:intron | 55.0% | |
TCCATTGACCACCGGGTCTA+GGG | - | chr7_3:82422912-82422931 | None:intergenic | 55.0% | |
! | GTTTGGCTCCATTGACCACC+GGG | - | chr7_3:82422919-82422938 | None:intergenic | 55.0% |
! | GGTTTGGCTCCATTGACCAC+CGG | - | chr7_3:82422920-82422939 | None:intergenic | 55.0% |
CAGGTATAGGCTAGGGGATG+TGG | + | chr7_3:82423950-82423969 | Msa1130300:CDS | 55.0% | |
ACAGTTAGCCGTGGAAGCAG+CGG | + | chr7_3:82424076-82424095 | Msa1130300:CDS | 55.0% | |
TCCCTAGACCCGGTGGTCAA+TGG | + | chr7_3:82422908-82422927 | Msa1130300:intron | 60.0% | |
CTCCATTGACCACCGGGTCT+AGG | - | chr7_3:82422913-82422932 | None:intergenic | 60.0% | |
! | TCAGTGAGTCCCACCGGCTG+AGG | - | chr7_3:82422318-82422337 | None:intergenic | 65.0% |
TCAGCCGGTGGGACTCACTG+AGG | + | chr7_3:82422317-82422336 | Msa1130300:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 82417417 | 82424641 | 82417417 | ID=Msa1130300;Name=Msa1130300 |
chr7_3 | mRNA | 82417417 | 82424641 | 82417417 | ID=Msa1130300-mRNA-1;Parent=Msa1130300;Name=Msa1130300-mRNA-1;_AED=0.24;_eAED=0.24;_QI=414|1|1|1|0.75|0.6|5|157|579 |
chr7_3 | exon | 82417417 | 82417788 | 82417417 | ID=Msa1130300-mRNA-1:exon:24290;Parent=Msa1130300-mRNA-1 |
chr7_3 | exon | 82420589 | 82420923 | 82420589 | ID=Msa1130300-mRNA-1:exon:24291;Parent=Msa1130300-mRNA-1 |
chr7_3 | exon | 82421026 | 82421127 | 82421026 | ID=Msa1130300-mRNA-1:exon:24292;Parent=Msa1130300-mRNA-1 |
chr7_3 | exon | 82421582 | 82422384 | 82421582 | ID=Msa1130300-mRNA-1:exon:24293;Parent=Msa1130300-mRNA-1 |
chr7_3 | exon | 82423943 | 82424641 | 82423943 | ID=Msa1130300-mRNA-1:exon:24294;Parent=Msa1130300-mRNA-1 |
chr7_3 | five_prime_UTR | 82417417 | 82417788 | 82417417 | ID=Msa1130300-mRNA-1:five_prime_utr;Parent=Msa1130300-mRNA-1 |
chr7_3 | five_prime_UTR | 82420589 | 82420630 | 82420589 | ID=Msa1130300-mRNA-1:five_prime_utr;Parent=Msa1130300-mRNA-1 |
chr7_3 | CDS | 82420631 | 82420923 | 82420631 | ID=Msa1130300-mRNA-1:cds;Parent=Msa1130300-mRNA-1 |
chr7_3 | CDS | 82421026 | 82421127 | 82421026 | ID=Msa1130300-mRNA-1:cds;Parent=Msa1130300-mRNA-1 |
chr7_3 | CDS | 82421582 | 82422384 | 82421582 | ID=Msa1130300-mRNA-1:cds;Parent=Msa1130300-mRNA-1 |
chr7_3 | CDS | 82423943 | 82424484 | 82423943 | ID=Msa1130300-mRNA-1:cds;Parent=Msa1130300-mRNA-1 |
chr7_3 | three_prime_UTR | 82424485 | 82424641 | 82424485 | ID=Msa1130300-mRNA-1:three_prime_utr;Parent=Msa1130300-mRNA-1 |
Gene Sequence |
Protein sequence |