Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037620 | XP_003626551.2 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037620 | sp|A0A1J6KGJ9|JAR4_NICAT | 73.875 | 578 | 146 | 2 | 1 | 578 | 4 | 576 | 0.0 | 902 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037620 | G7L419 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003300 | Msa1037620 | 0.811695 | 6.156518e-51 | -8.615850e-47 |
Msa0013920 | Msa1037620 | 0.807462 | 4.996235e-50 | -8.615850e-47 |
Msa0029000 | Msa1037620 | -0.814744 | 1.318176e-51 | -8.615850e-47 |
Msa0658570 | Msa1037620 | 0.816255 | 6.075692e-52 | -8.615850e-47 |
Msa0784270 | Msa1037620 | 0.819493 | 1.128115e-52 | -8.615850e-47 |
Msa0234440 | Msa1037620 | 0.844322 | 8.121216e-59 | -8.615850e-47 |
Msa0443290 | Msa1037620 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
Msa1037620 | Msa1130300 | 0.971932 | 6.009349e-134 | -8.615850e-47 |
Msa1037620 | Msa1184550 | 0.806989 | 6.291840e-50 | -8.615850e-47 |
Msa1037620 | Msa1185310 | 0.810370 | 1.192352e-50 | -8.615850e-47 |
Msa1037620 | Msa1185320 | 0.823199 | 1.575421e-53 | -8.615850e-47 |
Msa1037620 | Msa1264330 | -0.822320 | 2.523634e-53 | -8.615850e-47 |
Msa1037620 | Msa1267610 | 0.830587 | 2.700783e-55 | -8.615850e-47 |
Msa1037620 | Msa1288340 | 0.832490 | 9.176897e-56 | -8.615850e-47 |
Msa1037620 | Msa1376890 | 0.805848 | 1.094701e-49 | -8.615850e-47 |
Msa1037620 | Msa1433150 | -0.803437 | 3.488386e-49 | -8.615850e-47 |
Msa1037620 | Msa1459050 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
Msa0272730 | Msa1037620 | 0.834963 | 2.211039e-56 | -8.615850e-47 |
Msa0306810 | Msa1037620 | 0.806217 | 9.156640e-50 | -8.615850e-47 |
Msa0490870 | Msa1037620 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037620 | MtrunA17_Chr7g0275471 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
Msa1037620 | MtrunA17_Chr8g0347381 | 74.611 | 579 | 143 | 1 | 1 | 579 | 1 | 575 | 0.0 | 925 |
Msa1037620 | MtrunA17_Chr8g0347391 | 73.402 | 579 | 150 | 1 | 1 | 579 | 8 | 582 | 0.0 | 905 |
Msa1037620 | MtrunA17_Chr8g0347421 | 73.647 | 573 | 147 | 1 | 1 | 573 | 1 | 569 | 0.0 | 898 |
Msa1037620 | MtrunA17_Chr8g0347431 | 71.535 | 404 | 111 | 1 | 176 | 579 | 2 | 401 | 0.0 | 630 |
Msa1037620 | MtrunA17_Chr8g0352391 | 68.125 | 320 | 54 | 2 | 260 | 579 | 1 | 272 | 5.72e-148 | 427 |
Msa1037620 | MtrunA17_Chr5g0401641 | 39.931 | 581 | 338 | 6 | 5 | 578 | 15 | 591 | 6.24e-146 | 434 |
Msa1037620 | MtrunA17_Chr5g0421331 | 39.367 | 569 | 327 | 8 | 12 | 575 | 21 | 576 | 1.36e-136 | 409 |
Msa1037620 | MtrunA17_Chr8g0361551 | 35.919 | 593 | 358 | 9 | 1 | 575 | 1 | 589 | 2.40e-128 | 389 |
Msa1037620 | MtrunA17_Chr4g0022401 | 46.402 | 403 | 204 | 5 | 11 | 401 | 19 | 421 | 2.13e-127 | 380 |
Msa1037620 | MtrunA17_Chr2g0318991 | 36.254 | 582 | 348 | 8 | 12 | 575 | 15 | 591 | 5.96e-125 | 380 |
Msa1037620 | MtrunA17_Chr1g0195771 | 36.972 | 568 | 333 | 10 | 7 | 554 | 50 | 612 | 2.63e-118 | 364 |
Msa1037620 | MtrunA17_Chr4g0023301 | 35.223 | 494 | 304 | 7 | 92 | 576 | 6 | 492 | 8.58e-105 | 325 |
Msa1037620 | MtrunA17_Chr5g0401631 | 41.818 | 385 | 205 | 6 | 199 | 577 | 1 | 372 | 3.89e-102 | 314 |
Msa1037620 | MtrunA17_Chr1g0169871 | 82.955 | 176 | 30 | 0 | 318 | 493 | 139 | 314 | 2.74e-99 | 305 |
Msa1037620 | MtrunA17_Chr1g0169871 | 71.429 | 70 | 20 | 0 | 10 | 79 | 37 | 106 | 4.70e-24 | 103 |
Msa1037620 | MtrunA17_Chr7g0259291 | 34.669 | 574 | 339 | 15 | 11 | 561 | 5 | 565 | 4.23e-95 | 302 |
Msa1037620 | MtrunA17_Chr4g0022391 | 53.371 | 178 | 81 | 1 | 401 | 578 | 11 | 186 | 4.84e-63 | 205 |
Msa1037620 | MtrunA17_Chr8g0347441 | 68.182 | 132 | 42 | 0 | 1 | 132 | 1 | 132 | 2.69e-62 | 201 |
Msa1037620 | MtrunA17_Chr8g0352401 | 68.613 | 137 | 34 | 1 | 10 | 146 | 1 | 128 | 1.01e-59 | 194 |
Msa1037620 | MtrunA17_Chr7g0259401 | 35.055 | 271 | 143 | 7 | 140 | 408 | 10 | 249 | 6.94e-37 | 137 |
Msa1037620 | MtrunA17_Chr5g0401621 | 36.538 | 156 | 98 | 1 | 5 | 159 | 15 | 170 | 1.47e-23 | 98.2 |
Msa1037620 | MtrunA17_Chr4g0023291 | 44.706 | 85 | 47 | 0 | 9 | 93 | 28 | 112 | 1.10e-16 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037620 | AT2G46370.4 | 63.746 | 582 | 200 | 5 | 1 | 578 | 12 | 586 | 0.0 | 793 |
Msa1037620 | AT2G46370.1 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
Msa1037620 | AT2G46370.2 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
Msa1037620 | AT2G46370.3 | 65.209 | 503 | 166 | 3 | 78 | 578 | 1 | 496 | 0.0 | 715 |
Msa1037620 | AT4G03400.2 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
Msa1037620 | AT4G03400.1 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
Msa1037620 | AT4G37390.1 | 38.302 | 577 | 342 | 8 | 12 | 578 | 22 | 594 | 1.89e-137 | 412 |
Msa1037620 | AT2G23170.1 | 38.087 | 575 | 339 | 7 | 12 | 578 | 21 | 586 | 1.52e-136 | 410 |
Msa1037620 | AT2G14960.1 | 38.609 | 575 | 330 | 8 | 12 | 578 | 21 | 580 | 1.72e-134 | 404 |
Msa1037620 | AT4G27260.1 | 38.169 | 579 | 335 | 8 | 12 | 575 | 26 | 596 | 2.62e-132 | 400 |
Msa1037620 | AT1G23160.1 | 38.621 | 580 | 324 | 11 | 12 | 576 | 16 | 578 | 4.30e-132 | 398 |
Msa1037620 | AT1G48660.2 | 37.282 | 574 | 336 | 9 | 14 | 575 | 7 | 568 | 1.38e-131 | 397 |
Msa1037620 | AT1G48660.1 | 37.128 | 571 | 338 | 8 | 14 | 575 | 7 | 565 | 2.44e-131 | 396 |
Msa1037620 | AT1G59500.1 | 38.342 | 579 | 333 | 10 | 12 | 578 | 22 | 588 | 4.37e-131 | 396 |
Msa1037620 | AT5G54510.1 | 36.797 | 587 | 352 | 8 | 3 | 575 | 15 | 596 | 6.08e-129 | 391 |
Msa1037620 | AT5G13320.3 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.08e-126 | 383 |
Msa1037620 | AT5G13320.1 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.08e-126 | 383 |
Msa1037620 | AT5G13320.2 | 37.050 | 583 | 339 | 10 | 8 | 575 | 20 | 589 | 3.43e-126 | 383 |
Msa1037620 | AT5G13360.1 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.41e-122 | 372 |
Msa1037620 | AT5G13360.2 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.41e-122 | 372 |
Msa1037620 | AT5G13360.3 | 36.780 | 590 | 347 | 10 | 1 | 575 | 79 | 657 | 6.23e-121 | 372 |
Msa1037620 | AT5G51470.1 | 36.907 | 569 | 337 | 8 | 11 | 569 | 9 | 565 | 2.72e-120 | 368 |
Msa1037620 | AT5G13370.1 | 36.486 | 592 | 347 | 12 | 1 | 575 | 1 | 580 | 4.01e-120 | 368 |
Msa1037620 | AT1G28130.1 | 36.410 | 585 | 341 | 11 | 17 | 575 | 17 | 596 | 9.02e-120 | 367 |
Msa1037620 | AT5G13350.1 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.62e-118 | 361 |
Msa1037620 | AT5G13350.2 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.62e-118 | 361 |
Msa1037620 | AT5G13380.1 | 36.054 | 588 | 354 | 10 | 1 | 575 | 31 | 609 | 4.23e-117 | 361 |
Msa1037620 | AT2G47750.1 | 37.113 | 582 | 348 | 11 | 5 | 575 | 3 | 577 | 1.19e-116 | 358 |
Msa1037620 | AT1G48670.1 | 32.042 | 568 | 318 | 9 | 16 | 575 | 10 | 517 | 2.08e-97 | 306 |
Msa1037620 | AT5G51470.2 | 36.383 | 481 | 286 | 6 | 98 | 569 | 6 | 475 | 2.65e-97 | 305 |
Msa1037620 | AT1G28130.2 | 36.748 | 449 | 257 | 8 | 150 | 575 | 9 | 453 | 7.83e-91 | 288 |
Msa1037620 | AT1G48670.2 | 36.165 | 412 | 245 | 5 | 172 | 575 | 5 | 406 | 5.45e-89 | 281 |
Msa1037620 | AT1G48690.1 | 35.263 | 190 | 114 | 6 | 14 | 200 | 7 | 190 | 1.32e-21 | 93.2 |
Find 151 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAATGCAAAGTACATTTA+TGG | 0.084381 | 7_1:-74315018 | Msa1037620:CDS |
CTATTACCACTATGTCTTTA+AGG | 0.098138 | 7_1:-74316179 | Msa1037620:intron |
TCATTCCATGGTATATATTT+TGG | 0.122722 | 7_1:+74316033 | None:intergenic |
AGTATAGTATTAGGTAAAAT+TGG | 0.157891 | 7_1:+74319463 | None:intergenic |
ATTATTAGTAGAAGAGAAAT+TGG | 0.187935 | 7_1:-74312915 | Msa1037620:CDS |
GGAAACACTCAAAAGAATTT+TGG | 0.206331 | 7_1:-74316364 | Msa1037620:CDS |
GCTGAATATTTGCAGAATTT+TGG | 0.212038 | 7_1:-74316327 | Msa1037620:CDS |
GCTGACTCTAATTCCAATTA+AGG | 0.212797 | 7_1:+74319404 | None:intergenic |
AGGTTCTATGGAACCATATT+TGG | 0.217500 | 7_1:-74314986 | Msa1037620:CDS |
AAACTCACTAGTTCCTTAAT+TGG | 0.243859 | 7_1:-74319417 | Msa1037620:five_prime_UTR |
TGGATTATGTTAGCTAGTTC+TGG | 0.251144 | 7_1:+74315093 | None:intergenic |
TATGCTGTGCTTCCTCAAAT+TGG | 0.269811 | 7_1:-74314850 | Msa1037620:CDS |
TACGTAGTTCCCTGGTTCTT+TGG | 0.271512 | 7_1:+74312859 | None:intergenic |
TGGCATTATGACAGGTTCTA+TGG | 0.272655 | 7_1:-74314998 | Msa1037620:CDS |
AGGTAAAATTGGGAAATAAT+TGG | 0.274739 | 7_1:+74319474 | None:intergenic |
TCAGAGCCTTTGAACAAGTT+TGG | 0.276112 | 7_1:-74315212 | Msa1037620:CDS |
TTTCAGGTTTATACAGGTAT+AGG | 0.281287 | 7_1:-74313081 | Msa1037620:intron |
CTTGATCATTACCTTGGATT+AGG | 0.281601 | 7_1:-74312671 | Msa1037620:CDS |
CCTTAGAACTTCGGGTTGTT+AGG | 0.281656 | 7_1:-74312715 | Msa1037620:CDS |
CTTAAAGACATAGTGGTAAT+AGG | 0.285904 | 7_1:+74316180 | None:intergenic |
CAGGGAACTACGTAATCTTC+TGG | 0.286130 | 7_1:-74312850 | Msa1037620:CDS |
AGTCCAGATGAAGTGATATT+TGG | 0.291634 | 7_1:-74315342 | Msa1037620:CDS |
CCTAACAACCCGAAGTTCTA+AGG | 0.305448 | 7_1:+74312715 | None:intergenic |
TCAAGAATTCTACAGATAAA+AGG | 0.326689 | 7_1:+74316234 | None:intergenic |
CAGAGACAGAGTATAGTATT+AGG | 0.329230 | 7_1:+74319454 | None:intergenic |
CAGAGCCTTTGAACAAGTTT+GGG | 0.335203 | 7_1:-74315211 | Msa1037620:CDS |
ATGTTAGCTAGTTCTGGATT+TGG | 0.354156 | 7_1:+74315099 | None:intergenic |
TTTATCTGTAGAATTCTTGA+TGG | 0.355516 | 7_1:-74316231 | Msa1037620:CDS |
ACTAAATTTCAGGTTTATAC+AGG | 0.363189 | 7_1:-74313087 | Msa1037620:intron |
TATTGGAGCCTTAGAACTTC+GGG | 0.374940 | 7_1:-74312723 | Msa1037620:CDS |
GGGGATGTGGTAAAAGTTAT+GGG | 0.377506 | 7_1:-74313055 | Msa1037620:CDS |
GAAGTTGAAGATTCTTTGTT+GGG | 0.382616 | 7_1:+74319604 | None:intergenic |
TCTCGTAAAGTCAACTCTAT+TGG | 0.387723 | 7_1:-74312740 | Msa1037620:CDS |
CCTACCTGCCCAAGTATATT+CGG | 0.392294 | 7_1:-74312404 | Msa1037620:three_prime_UTR |
AAGGCTTTAAACTTCATATA+CGG | 0.393788 | 7_1:-74315477 | Msa1037620:CDS |
CTACGAATAAACTTTAGTTC+TGG | 0.395325 | 7_1:+74313016 | None:intergenic |
AGCAAACAGTTCAAAACAAA+AGG | 0.397243 | 7_1:-74315453 | Msa1037620:CDS |
CCTTTGTGTACTGCTGACTA+TGG | 0.399568 | 7_1:-74314934 | Msa1037620:CDS |
TGAAGTTGAAGATTCTTTGT+TGG | 0.401210 | 7_1:+74319603 | None:intergenic |
CCATAAATGTACTTTGCATT+GGG | 0.403210 | 7_1:+74315018 | None:intergenic |
GATGTATAGGATTAAGCAAC+TGG | 0.406579 | 7_1:-74315065 | Msa1037620:CDS |
ATAGATGACAATATAATGAT+TGG | 0.410685 | 7_1:+74315307 | None:intergenic |
GCCATAAATGTACTTTGCAT+TGG | 0.412688 | 7_1:+74315017 | None:intergenic |
TTCATTGCATGTTTGTAAGA+TGG | 0.414552 | 7_1:+74315387 | None:intergenic |
AATAAATGAAAATGAAATGA+TGG | 0.414928 | 7_1:+74319573 | None:intergenic |
ATAATCCACAAAAGATGTAT+AGG | 0.416203 | 7_1:-74315078 | Msa1037620:CDS |
TTAAAACAGCCGAATATACT+TGG | 0.419782 | 7_1:+74312395 | None:intergenic |
TGGGAGATGGAATAGTAAAT+TGG | 0.421018 | 7_1:+74319623 | None:intergenic |
ACAGCATAAGTTGCCAATTC+AGG | 0.421103 | 7_1:+74314865 | None:intergenic |
TATTGAAGAAAGTGACCAAT+TGG | 0.422937 | 7_1:+74319354 | None:intergenic |
CTGTTGAAGGGGTGTGAGTT+AGG | 0.424996 | 7_1:-74316473 | Msa1037620:five_prime_UTR |
GCTAAAGAAAACTCTGTTGA+AGG | 0.425278 | 7_1:-74316486 | Msa1037620:five_prime_UTR |
TTTCCGCGAGGAAGTTCAAT+TGG | 0.426349 | 7_1:-74315271 | Msa1037620:CDS |
AAAATTCTTGATCATTACCT+TGG | 0.430567 | 7_1:-74312677 | Msa1037620:CDS |
AGGGGATGTGGTAAAAGTTA+TGG | 0.432684 | 7_1:-74313056 | Msa1037620:CDS |
CCGCCAAATATCACTTCATC+TGG | 0.432735 | 7_1:+74315339 | None:intergenic |
AAGTGACCAATTGGATGAAA+AGG | 0.438836 | 7_1:+74319363 | None:intergenic |
GTATAGTATTAGGTAAAATT+GGG | 0.439650 | 7_1:+74319464 | None:intergenic |
TACATTTATGGCATTATGAC+AGG | 0.440289 | 7_1:-74315006 | Msa1037620:CDS |
AAACCACAATGCAGATATAT+CGG | 0.444589 | 7_1:-74315999 | Msa1037620:CDS |
TTAGTTCTGGAGTTGAGTTA+TGG | 0.454186 | 7_1:+74313029 | None:intergenic |
CTAGTGAGTTTGTGTATGTA+TGG | 0.454889 | 7_1:+74319429 | None:intergenic |
ATTGTTATGACCACTCCAAC+AGG | 0.456262 | 7_1:-74314718 | Msa1037620:intron |
ATGGCTAGTAGTAGAGTAGT+AGG | 0.461090 | 7_1:+74319511 | None:intergenic |
CTATTGGAGCCTTAGAACTT+CGG | 0.462174 | 7_1:-74312724 | Msa1037620:CDS |
CAGGTATAGGCTAGGGGATG+TGG | 0.467515 | 7_1:-74313068 | Msa1037620:CDS |
GAAGATTCTTTGTTGGGAGA+TGG | 0.468160 | 7_1:+74319610 | None:intergenic |
TGCAGTTCTGGCACTACGCA+AGG | 0.476283 | 7_1:-74316060 | Msa1037620:intron |
AACAAAACATGTGGAGTGGT+TGG | 0.476869 | 7_1:+74319660 | None:intergenic |
GAACTTCGGGTTGTTAGGAA+AGG | 0.487975 | 7_1:-74312710 | Msa1037620:CDS |
ATGAAAATGAAATGATGGGT+TGG | 0.489675 | 7_1:+74319578 | None:intergenic |
AACTCAAAGTAACCAATTTG+AGG | 0.491446 | 7_1:+74314838 | None:intergenic |
ATCTTACAAACATGCAATGA+AGG | 0.492223 | 7_1:-74315385 | Msa1037620:CDS |
GCAAACAGTTCAAAACAAAA+GGG | 0.492256 | 7_1:-74315452 | Msa1037620:CDS |
CTAAAGAAAACTCTGTTGAA+GGG | 0.498544 | 7_1:-74316485 | Msa1037620:five_prime_UTR |
GAGTGAATGCTGCAACTGTT+TGG | 0.498901 | 7_1:-74312795 | Msa1037620:CDS |
CCTTTGTGTTAATCCTCAGC+CGG | 0.501458 | 7_1:-74314779 | Msa1037620:CDS |
AATTACTAAAGATGCAGAAA+GGG | 0.503049 | 7_1:-74316394 | Msa1037620:CDS |
CAGAAGATTACGTAGTTCCC+TGG | 0.503210 | 7_1:+74312851 | None:intergenic |
GTTTATACAGGTATAGGCTA+GGG | 0.505461 | 7_1:-74313075 | Msa1037620:CDS |
TCAGTGAGTCCCACCGGCTG+AGG | 0.514095 | 7_1:+74314766 | None:intergenic |
TCAAACAATTCATCATTCCA+TGG | 0.514252 | 7_1:+74316021 | None:intergenic |
CTCTTCCCAAACTTGTTCAA+AGG | 0.517970 | 7_1:+74315206 | None:intergenic |
AGATGAAGACCTGTTCCTAT+AGG | 0.519223 | 7_1:+74315966 | None:intergenic |
GAGTAGTAGGTGGTGTGTTG+TGG | 0.519698 | 7_1:+74319524 | None:intergenic |
GACATAGCAGTTCGAATGGA+GGG | 0.520344 | 7_1:+74315135 | None:intergenic |
AGGGAACTACGTAATCTTCT+GGG | 0.522975 | 7_1:-74312849 | Msa1037620:CDS |
CCTGTTCCTATAGGCAAAAG+AGG | 0.524965 | 7_1:+74315975 | None:intergenic |
TAATCTTCTGGGAAATCAGT+GGG | 0.525589 | 7_1:-74312838 | Msa1037620:CDS |
GGTTTATACAGGTATAGGCT+AGG | 0.526104 | 7_1:-74313076 | Msa1037620:CDS |
TAATTACTAAAGATGCAGAA+AGG | 0.529649 | 7_1:-74316395 | Msa1037620:CDS |
TTGTGTTAATCCTCAGCCGG+TGG | 0.532157 | 7_1:-74314776 | Msa1037620:CDS |
CCAGATGAAGTGATATTTGG+CGG | 0.533852 | 7_1:-74315339 | Msa1037620:CDS |
TGAAAATGAAATGATGGGTT+GGG | 0.537697 | 7_1:+74319579 | None:intergenic |
GATGCTTCTCCCATTCTCAC+TGG | 0.537832 | 7_1:-74316207 | Msa1037620:CDS |
GCTGACTATGGAGCTTCTGA+AGG | 0.543026 | 7_1:-74314922 | Msa1037620:CDS |
GTAAAACTGAGGCACTATGC+AGG | 0.551972 | 7_1:-74314964 | Msa1037620:CDS |
GGAAATAATTGGTTGTGACT+TGG | 0.554414 | 7_1:+74319485 | None:intergenic |
ACTAAATTCTCTGCCACCCC+AGG | 0.556766 | 7_1:-74319316 | Msa1037620:intron |
GGACTCACTGAGGTTAAAGT+TGG | 0.561408 | 7_1:-74314754 | Msa1037620:CDS |
TTTAGACATAGCAGTTCGAA+TGG | 0.562118 | 7_1:+74315131 | None:intergenic |
GAAAGATTTACAGTTAGCCG+TGG | 0.563252 | 7_1:-74312951 | Msa1037620:CDS |
AAGTCTTTGTGAGTAGCTAG+TGG | 0.565261 | 7_1:+74316261 | None:intergenic |
CTTTGTAATGATATAAGAGA+AGG | 0.565767 | 7_1:-74315183 | Msa1037620:CDS |
ACTAGCTACTCACAAAGACT+TGG | 0.569122 | 7_1:-74316259 | Msa1037620:CDS |
GTTGATTTATCCAAAGAACC+AGG | 0.570837 | 7_1:-74312869 | Msa1037620:CDS |
ACAGCCGAATATACTTGGGC+AGG | 0.572353 | 7_1:+74312400 | None:intergenic |
TCATTCTCAAGCTGTGTGAG+AGG | 0.572827 | 7_1:+74314811 | None:intergenic |
ACAACACCTTAAAGACATAG+TGG | 0.579090 | 7_1:+74316173 | None:intergenic |
AGATGCAGAAAGGGTTCAGA+GGG | 0.579727 | 7_1:-74316385 | Msa1037620:CDS |
TGTGTAGGACCTACACATCT+TGG | 0.580216 | 7_1:+74312623 | None:intergenic |
TAACAGCTGTTCCTAATCCA+AGG | 0.581897 | 7_1:+74312660 | None:intergenic |
GGAAGCCAAAATATATACCA+TGG | 0.582732 | 7_1:-74316038 | Msa1037620:CDS |
TAAAACAGCCGAATATACTT+GGG | 0.584009 | 7_1:+74312396 | None:intergenic |
TATAAAACACCAAGATGTGT+AGG | 0.586504 | 7_1:-74312632 | Msa1037620:CDS |
ACTATGGAGCTTCTGAAGGG+TGG | 0.586810 | 7_1:-74314918 | Msa1037620:CDS |
CCGAATATACTTGGGCAGGT+AGG | 0.588559 | 7_1:+74312404 | None:intergenic |
ATAGGATTAAGCAACTGGTA+TGG | 0.589066 | 7_1:-74315060 | Msa1037620:CDS |
CAGAACTAAAGTTTATTCGT+AGG | 0.592685 | 7_1:-74313015 | Msa1037620:CDS |
TTATATTGTCATCTATTATG+CGG | 0.600773 | 7_1:-74315300 | Msa1037620:CDS |
ACAGTTAGCCGTGGAAGCAG+CGG | 0.606164 | 7_1:-74312942 | Msa1037620:CDS |
TTAACCTCAGTGAGTCCCAC+CGG | 0.608632 | 7_1:+74314760 | None:intergenic |
AGACATAGCAGTTCGAATGG+AGG | 0.608831 | 7_1:+74315134 | None:intergenic |
AGCAGTTCGAATGGAGGGAA+CGG | 0.609463 | 7_1:+74315140 | None:intergenic |
GACCAATTGGATGAAAAGGA+AGG | 0.612578 | 7_1:+74319367 | None:intergenic |
GCATAAGTTGCCAATTCAGG+TGG | 0.614033 | 7_1:+74314868 | None:intergenic |
ATAAATGAAAATGAAATGAT+GGG | 0.615841 | 7_1:+74319574 | None:intergenic |
TGAGTACTTACCTGTTGGAG+TGG | 0.617705 | 7_1:+74314708 | None:intergenic |
ACAATAATAACAATCGACAT+TGG | 0.619144 | 7_1:-74312533 | Msa1037620:three_prime_UTR |
TAAAGAAAACTCTGTTGAAG+GGG | 0.621449 | 7_1:-74316484 | Msa1037620:five_prime_UTR |
GCAGTTCTGGCACTACGCAA+GGG | 0.622048 | 7_1:-74316059 | Msa1037620:intron |
GCTAGTAGTAGAGTAGTAGG+TGG | 0.630535 | 7_1:+74319514 | None:intergenic |
GTAATCTTCTGGGAAATCAG+TGG | 0.631300 | 7_1:-74312839 | Msa1037620:CDS |
AAGATGCAGAAAGGGTTCAG+AGG | 0.633150 | 7_1:-74316386 | Msa1037620:CDS |
AAAGTTTATAGTACCTGGGG+TGG | 0.633453 | 7_1:+74319303 | None:intergenic |
CTGACTATGGAGCTTCTGAA+GGG | 0.645246 | 7_1:-74314921 | Msa1037620:CDS |
CCATAGTCAGCAGTACACAA+AGG | 0.646601 | 7_1:+74314934 | None:intergenic |
GGTCCGATATATCTGCATTG+TGG | 0.647561 | 7_1:+74315996 | None:intergenic |
TTTATACAGGTATAGGCTAG+GGG | 0.649562 | 7_1:-74313074 | Msa1037620:CDS |
ATTGGTTGTGACTTGGCACA+TGG | 0.650294 | 7_1:+74319492 | None:intergenic |
CAAACAGTTCAAAACAAAAG+GGG | 0.653886 | 7_1:-74315451 | Msa1037620:CDS |
TTGATTTATCCAAAGAACCA+GGG | 0.653926 | 7_1:-74312868 | Msa1037620:CDS |
GAAAGTGAAAGAGTTTAACA+TGG | 0.667358 | 7_1:-74316442 | Msa1037620:CDS |
CCGGCTGAGGATTAACACAA+AGG | 0.670791 | 7_1:+74314779 | None:intergenic |
AACCATATTTGGTAAAACTG+AGG | 0.675088 | 7_1:-74314975 | Msa1037620:CDS |
AAACAGTTCAAAACAAAAGG+GGG | 0.677242 | 7_1:-74315450 | Msa1037620:CDS |
GTTCTTTGGATAAATCAACA+TGG | 0.683092 | 7_1:+74312873 | None:intergenic |
TGCAACACAATGTTGTGTGT+AGG | 0.700702 | 7_1:+74312608 | None:intergenic |
TCAGCCGGTGGGACTCACTG+AGG | 0.714814 | 7_1:-74314764 | Msa1037620:CDS |
AATCTTCTGGGAAATCAGTG+GGG | 0.735072 | 7_1:-74312837 | Msa1037620:CDS |
ATACCAATTGAACTTCCTCG+CGG | 0.744188 | 7_1:+74315268 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAAATTTTACAAAATCA+CGG | + | chr7_1:74312977-74312996 | None:intergenic | 10.0% |
!!! | ATAATAAACATTTTTTTTGA+AGG | - | chr7_1:74314686-74314705 | Msa1037620:intron | 10.0% |
!! | ATAATAAACATGTTAAATAA+AGG | - | chr7_1:74314719-74314738 | Msa1037620:CDS | 10.0% |
!! | AACTATAAAAAAAATTTACA+GGG | + | chr7_1:74314794-74314813 | None:intergenic | 10.0% |
!! | AAACTATAAAAAAAATTTAC+AGG | + | chr7_1:74314795-74314814 | None:intergenic | 10.0% |
!!! | AATTCTTTTTTTATAGTTTT+TGG | + | chr7_1:74315203-74315222 | None:intergenic | 10.0% |
!! | AATTAAGTAATAAATATTCT+TGG | - | chr7_1:74318789-74318808 | Msa1037620:intron | 10.0% |
!!! | TTTTTTTTTAACTAAAACTA+AGG | + | chr7_1:74319580-74319599 | None:intergenic | 10.0% |
!! | ATAAATGAAAATGAAATGAT+GGG | + | chr7_1:74312491-74312510 | None:intergenic | 15.0% |
!! | AATAAATGAAAATGAAATGA+TGG | + | chr7_1:74312492-74312511 | None:intergenic | 15.0% |
!!! | AAATTTTACTAGAAAAAACT+TGG | + | chr7_1:74312889-74312908 | None:intergenic | 15.0% |
!! | TAAGCTATATAAATGTTAAA+AGG | + | chr7_1:74313388-74313407 | None:intergenic | 15.0% |
!!! | TTTTAAAGAATTTTTCATGT+TGG | - | chr7_1:74313507-74313526 | Msa1037620:intron | 15.0% |
!! | ATTTAAACATCATGAAATTA+CGG | + | chr7_1:74314096-74314115 | None:intergenic | 15.0% |
!!! | TAATTTTAGAATGTTCTTTT+TGG | - | chr7_1:74314168-74314187 | Msa1037620:intron | 15.0% |
!! | TATTATCTTTGAATAGATAA+GGG | + | chr7_1:74314672-74314691 | None:intergenic | 15.0% |
!! | TTATTATCTTTGAATAGATA+AGG | + | chr7_1:74314673-74314692 | None:intergenic | 15.0% |
!! | AAACTATAAAAAAATTTGCA+AGG | + | chr7_1:74314855-74314874 | None:intergenic | 15.0% |
!!! | GCAAATTTTTTTATAGTTTT+TGG | - | chr7_1:74314856-74314875 | Msa1037620:CDS | 15.0% |
!! | CTATAAAAAAAAAATTTGCA+GGG | + | chr7_1:74314915-74314934 | None:intergenic | 15.0% |
!! | ACTATAAAAAAAAAATTTGC+AGG | + | chr7_1:74314916-74314935 | None:intergenic | 15.0% |
!!! | ATTTATTTAAGGCTAAAATA+TGG | + | chr7_1:74315332-74315351 | None:intergenic | 15.0% |
!! | TGAATAAAGAACAATAAAAA+TGG | + | chr7_1:74316188-74316207 | None:intergenic | 15.0% |
!! | TATTCTATAGATACTATTTA+TGG | + | chr7_1:74316444-74316463 | None:intergenic | 15.0% |
!! | AAAATAGAAGAAAAAAACAT+AGG | + | chr7_1:74316470-74316489 | None:intergenic | 15.0% |
!! | TAAAGAAAAACATCATAATA+AGG | - | chr7_1:74317527-74317546 | Msa1037620:intron | 15.0% |
!!! | TTTTATTGATTGAAATTCAT+AGG | - | chr7_1:74317597-74317616 | Msa1037620:intron | 15.0% |
!!! | TTTATTGATTGAAATTCATA+GGG | - | chr7_1:74317598-74317617 | Msa1037620:intron | 15.0% |
!!! | AATTTTTCTACTGTATATTT+CGG | - | chr7_1:74318048-74318067 | Msa1037620:intron | 15.0% |
!!! | TGCTATATTTTAATCTTATT+AGG | + | chr7_1:74318522-74318541 | None:intergenic | 15.0% |
!! | TTCTTAATGAATATTTGAAT+TGG | + | chr7_1:74318914-74318933 | None:intergenic | 15.0% |
!! | GTATAGTATTAGGTAAAATT+GGG | + | chr7_1:74312601-74312620 | None:intergenic | 20.0% |
!! | AGTATAGTATTAGGTAAAAT+TGG | + | chr7_1:74312602-74312621 | None:intergenic | 20.0% |
!!! | GCTTTGTATTTTAAATCTTA+CGG | - | chr7_1:74312846-74312865 | Msa1037620:CDS | 20.0% |
!! | ATTACTAATAAGTGCATATT+TGG | + | chr7_1:74313059-74313078 | None:intergenic | 20.0% |
!! | TAATAATCAACCAATCAAAT+TGG | + | chr7_1:74313229-74313248 | None:intergenic | 20.0% |
!!! | TTTTTTGTTTCTTTTGAAGT+AGG | - | chr7_1:74313335-74313354 | Msa1037620:intron | 20.0% |
!! | TTAAAAGGAGTTAAAATGAA+CGG | + | chr7_1:74313373-74313392 | None:intergenic | 20.0% |
!!! | CTTTTTTTTAACCTTTATTG+TGG | - | chr7_1:74313429-74313448 | Msa1037620:intron | 20.0% |
!!! | GTTTGCATATGAATTTTATT+TGG | - | chr7_1:74313482-74313501 | Msa1037620:intron | 20.0% |
!! | AGGATAATATCAGTAAAATA+AGG | + | chr7_1:74313913-74313932 | None:intergenic | 20.0% |
!! | ATCAATTTCATGAAATTTCA+TGG | - | chr7_1:74314067-74314086 | Msa1037620:intron | 20.0% |
!! | TTTCCAAATTGTAGTAATTA+GGG | + | chr7_1:74314591-74314610 | None:intergenic | 20.0% |
!!! | TTTTCCAAATTGTAGTAATT+AGG | + | chr7_1:74314592-74314611 | None:intergenic | 20.0% |
!! | GTTAAATAAAGGCTAAAATA+TGG | - | chr7_1:74314730-74314749 | Msa1037620:CDS | 20.0% |
!!! | TCAAAAACAAAATTTTTTGC+AGG | - | chr7_1:74315175-74315194 | Msa1037620:CDS | 20.0% |
!! | ACTATAAAAAAAGAATTGCA+TGG | - | chr7_1:74315206-74315225 | Msa1037620:CDS | 20.0% |
!!! | GTATTATAAGTACATTGTTT+TGG | + | chr7_1:74315447-74315466 | None:intergenic | 20.0% |
!!! | TTTTAATACAAGATGATGAT+TGG | + | chr7_1:74315522-74315541 | None:intergenic | 20.0% |
!! | CATCATCTTGTATTAAAATT+TGG | - | chr7_1:74315524-74315543 | Msa1037620:intron | 20.0% |
!!! | TCTTTATTTCTGATATTTGT+TGG | - | chr7_1:74316133-74316152 | Msa1037620:intron | 20.0% |
!!! | CTTTATTTCTGATATTTGTT+GGG | - | chr7_1:74316134-74316153 | Msa1037620:intron | 20.0% |
!! | AACAATAAAAATGGTATACA+AGG | + | chr7_1:74316179-74316198 | None:intergenic | 20.0% |
!! | ATAGATGACAATATAATGAT+TGG | + | chr7_1:74316758-74316777 | None:intergenic | 20.0% |
!! | TTATATTGTCATCTATTATG+CGG | - | chr7_1:74316762-74316781 | Msa1037620:intron | 20.0% |
!!! | TTATTGATTGAAATTCATAG+GGG | - | chr7_1:74317599-74317618 | Msa1037620:intron | 20.0% |
!! | GAATATAAATTAAATGCTCT+TGG | - | chr7_1:74318070-74318089 | Msa1037620:intron | 20.0% |
!! | AAAATGAAAAAAGTAACCTA+AGG | + | chr7_1:74318098-74318117 | None:intergenic | 20.0% |
!! | TGTTACATCATTTAACATTA+GGG | + | chr7_1:74318210-74318229 | None:intergenic | 20.0% |
!! | TTGTTACATCATTTAACATT+AGG | + | chr7_1:74318211-74318230 | None:intergenic | 20.0% |
!!! | TATTTAAACTGCTTTAAATC+TGG | + | chr7_1:74318283-74318302 | None:intergenic | 20.0% |
!! | TTTAAATCTGTAATGATGTA+TGG | - | chr7_1:74318319-74318338 | Msa1037620:intron | 20.0% |
!! | TGTTAAAATCGTAATTGAAA+GGG | + | chr7_1:74318349-74318368 | None:intergenic | 20.0% |
!! | TTGTTAAAATCGTAATTGAA+AGG | + | chr7_1:74318350-74318369 | None:intergenic | 20.0% |
!! | GAAAATATTTATAATGCTTC+TGG | - | chr7_1:74318373-74318392 | Msa1037620:intron | 20.0% |
!! | ATGAATAAACTTGTCTAATT+TGG | + | chr7_1:74318467-74318486 | None:intergenic | 20.0% |
!! | ATTATTAGTAGAAGAGAAAT+TGG | - | chr7_1:74319147-74319166 | Msa1037620:intron | 20.0% |
!!! | GTTTCATTTTTTTATAAGCA+TGG | - | chr7_1:74319628-74319647 | Msa1037620:five_prime_UTR | 20.0% |
! | AGGTAAAATTGGGAAATAAT+TGG | + | chr7_1:74312591-74312610 | None:intergenic | 25.0% |
! | ATACTAGTACTAGAAGATAA+AGG | + | chr7_1:74312801-74312820 | None:intergenic | 25.0% |
!! | AGATTTAAAATACAAAGCAG+TGG | + | chr7_1:74312844-74312863 | None:intergenic | 25.0% |
! | TATGCACTTATTAGTAATAG+AGG | - | chr7_1:74313061-74313080 | Msa1037620:CDS | 25.0% |
! | GAAGGAAGAAAATAGAAAAA+GGG | + | chr7_1:74313148-74313167 | None:intergenic | 25.0% |
! | TGAAGGAAGAAAATAGAAAA+AGG | + | chr7_1:74313149-74313168 | None:intergenic | 25.0% |
! | TCTTCCTTCAAACATTTATT+TGG | - | chr7_1:74313159-74313178 | Msa1037620:intron | 25.0% |
! | AGTACCAAATAAATGTTTGA+AGG | + | chr7_1:74313166-74313185 | None:intergenic | 25.0% |
! | TCAAACATTTATTTGGTACT+TGG | - | chr7_1:74313166-74313185 | Msa1037620:intron | 25.0% |
! | AAGGTTAAAAAAAAGACACA+TGG | + | chr7_1:74313424-74313443 | None:intergenic | 25.0% |
! | AAGAGAAATTTCCACAATAA+AGG | + | chr7_1:74313443-74313462 | None:intergenic | 25.0% |
! | ATGTAGCAATTGCTAAATTA+AGG | - | chr7_1:74313570-74313589 | Msa1037620:intron | 25.0% |
! | GGAACATTAATAACCAATTT+AGG | + | chr7_1:74313666-74313685 | None:intergenic | 25.0% |
! | TCAAAACTACTATTACTACT+AGG | - | chr7_1:74313695-74313714 | Msa1037620:intron | 25.0% |
! | CAAAACTACTATTACTACTA+GGG | - | chr7_1:74313696-74313715 | Msa1037620:intron | 25.0% |
! | AAAACTACTATTACTACTAG+GGG | - | chr7_1:74313697-74313716 | Msa1037620:intron | 25.0% |
!!! | AATAAGGTCGGATATTTTTT+CGG | + | chr7_1:74313775-74313794 | None:intergenic | 25.0% |
! | AAAAAATATCCGACCTTATT+TGG | - | chr7_1:74313775-74313794 | Msa1037620:intron | 25.0% |
! | GAAATTTCATGAAATTGATG+TGG | + | chr7_1:74314066-74314085 | None:intergenic | 25.0% |
!!! | TGTTTTAATTTCAGTTTGCA+TGG | - | chr7_1:74314123-74314142 | Msa1037620:intron | 25.0% |
!!! | AAGTTGTTTTTGAAGAATGA+TGG | - | chr7_1:74314259-74314278 | Msa1037620:intron | 25.0% |
! | TTCCAAATTGTAGTAATTAG+GGG | + | chr7_1:74314590-74314609 | None:intergenic | 25.0% |
!! | TTCGATGTAACCTTTATTTA+CGG | - | chr7_1:74314644-74314663 | Msa1037620:intron | 25.0% |
! | TAAAGGCTAAAATATGGTAT+TGG | - | chr7_1:74314736-74314755 | Msa1037620:CDS | 25.0% |
!!! | TCCTGCAAAATTTTTGTTTT+TGG | - | chr7_1:74314942-74314961 | Msa1037620:CDS | 25.0% |
!! | TCCAAAAACAAAAATTTTGC+AGG | + | chr7_1:74314946-74314965 | None:intergenic | 25.0% |
! | TGACAAATCATCACATAATT+GGG | + | chr7_1:74314982-74315001 | None:intergenic | 25.0% |
!!! | AAAACTGACCTATTTTTGTA+GGG | - | chr7_1:74315238-74315257 | Msa1037620:CDS | 25.0% |
! | TTAAGGCTAAAATATGGAAT+TGG | + | chr7_1:74315326-74315345 | None:intergenic | 25.0% |
! | CTTAAATAAATATACACGCA+CGG | - | chr7_1:74315341-74315360 | Msa1037620:CDS | 25.0% |
! | GGGATAAATAAATACAAACA+TGG | + | chr7_1:74315404-74315423 | None:intergenic | 25.0% |
! | TAATTACTAAAGATGCAGAA+AGG | - | chr7_1:74315667-74315686 | Msa1037620:intron | 25.0% |
! | AATTACTAAAGATGCAGAAA+GGG | - | chr7_1:74315668-74315687 | Msa1037620:intron | 25.0% |
! | TCAAGAATTCTACAGATAAA+AGG | + | chr7_1:74315831-74315850 | None:intergenic | 25.0% |
! | TTTATCTGTAGAATTCTTGA+TGG | - | chr7_1:74315831-74315850 | Msa1037620:intron | 25.0% |
!! | TCATTCCATGGTATATATTT+TGG | + | chr7_1:74316032-74316051 | None:intergenic | 25.0% |
!! | TTTTCCGTTGTTTATACAAT+CGG | + | chr7_1:74316263-74316282 | None:intergenic | 25.0% |
! | AGAGAGTTTCCTATAAAAAA+TGG | - | chr7_1:74316561-74316580 | Msa1037620:intron | 25.0% |
! | GAGAGTTTCCTATAAAAAAT+GGG | - | chr7_1:74316562-74316581 | Msa1037620:intron | 25.0% |
!!! | AAGGCTTTAAACTTCATATA+CGG | - | chr7_1:74316585-74316604 | Msa1037620:intron | 25.0% |
! | CTTTGTAATGATATAAGAGA+AGG | - | chr7_1:74316879-74316898 | Msa1037620:intron | 25.0% |
! | ATAATCCACAAAAGATGTAT+AGG | - | chr7_1:74316984-74317003 | Msa1037620:intron | 25.0% |
!! | TTAATCCTATACATCTTTTG+TGG | + | chr7_1:74316992-74317011 | None:intergenic | 25.0% |
! | AATGAAGAAAAAAGTAGTTG+TGG | + | chr7_1:74317464-74317483 | None:intergenic | 25.0% |
!! | TTCAACATACTCTCTTTTAT+TGG | + | chr7_1:74317676-74317695 | None:intergenic | 25.0% |
!! | CATTTCTCTTTCATTTTGAA+CGG | - | chr7_1:74317848-74317867 | Msa1037620:intron | 25.0% |
! | GTTACATCATTTAACATTAG+GGG | + | chr7_1:74318209-74318228 | None:intergenic | 25.0% |
! | TGTTAAATGATGTAACAAAG+TGG | - | chr7_1:74318213-74318232 | Msa1037620:intron | 25.0% |
!! | CATCATTACAGATTTAAAAC+TGG | + | chr7_1:74318317-74318336 | None:intergenic | 25.0% |
!! | TGGATGTATTTTATTATGCT+TGG | - | chr7_1:74318421-74318440 | Msa1037620:intron | 25.0% |
!! | ATGTATTTTATTATGCTTGG+TGG | - | chr7_1:74318424-74318443 | Msa1037620:intron | 25.0% |
!! | TTATTTAATCGAGCTTTTCT+TGG | - | chr7_1:74318589-74318608 | Msa1037620:intron | 25.0% |
!!! | ACTAAATTTCAGGTTTATAC+AGG | - | chr7_1:74318975-74318994 | Msa1037620:intron | 25.0% |
! | AAAATTCTTGATCATTACCT+TGG | - | chr7_1:74319385-74319404 | Msa1037620:five_prime_UTR | 25.0% |
! | ACAATAATAACAATCGACAT+TGG | - | chr7_1:74319529-74319548 | Msa1037620:five_prime_UTR | 25.0% |
AACTCCAAAAACAAAACATG+TGG | + | chr7_1:74312414-74312433 | None:intergenic | 30.0% | |
GAAGTTGAAGATTCTTTGTT+GGG | + | chr7_1:74312461-74312480 | None:intergenic | 30.0% | |
TGAAGTTGAAGATTCTTTGT+TGG | + | chr7_1:74312462-74312481 | None:intergenic | 30.0% | |
!! | TGAAAATGAAATGATGGGTT+GGG | + | chr7_1:74312486-74312505 | None:intergenic | 30.0% |
!! | ATGAAAATGAAATGATGGGT+TGG | + | chr7_1:74312487-74312506 | None:intergenic | 30.0% |
AAACTCACTAGTTCCTTAAT+TGG | - | chr7_1:74312645-74312664 | Msa1037620:CDS | 30.0% | |
TATTGAAGAAAGTGACCAAT+TGG | + | chr7_1:74312711-74312730 | None:intergenic | 30.0% | |
AGCTAAAGTTTATAGTACCT+GGG | + | chr7_1:74312766-74312785 | None:intergenic | 30.0% | |
AAGCTAAAGTTTATAGTACC+TGG | + | chr7_1:74312767-74312786 | None:intergenic | 30.0% | |
CAGATGAATTAGTGTATGTT+TGG | - | chr7_1:74312925-74312944 | Msa1037620:CDS | 30.0% | |
CAATAAGAGTGGTAAAATCA+AGG | + | chr7_1:74313031-74313050 | None:intergenic | 30.0% | |
AGAGTAATAGTGGTAGAAAA+TGG | + | chr7_1:74313100-74313119 | None:intergenic | 30.0% | |
! | TTTTCTACCACTATTACTCT+AGG | - | chr7_1:74313100-74313119 | Msa1037620:intron | 30.0% |
! | CTAGAATGATAATGACAAGT+AGG | + | chr7_1:74313195-74313214 | None:intergenic | 30.0% |
CTTGTCATTATCATTCTAGA+TGG | - | chr7_1:74313196-74313215 | Msa1037620:intron | 30.0% | |
!!! | TTGTTTCTTTTGAAGTAGGT+AGG | - | chr7_1:74313339-74313358 | Msa1037620:intron | 30.0% |
!!! | TAGTAGTTTTGAGAAAGTGA+AGG | + | chr7_1:74313687-74313706 | None:intergenic | 30.0% |
!!! | GATATTTTTTCGGTTTGGTT+CGG | + | chr7_1:74313765-74313784 | None:intergenic | 30.0% |
GTTTCAAACCTAACCAAATA+AGG | + | chr7_1:74313791-74313810 | None:intergenic | 30.0% | |
!! | ATAAGGAGTGTTGTTATCAT+CGG | + | chr7_1:74313896-74313915 | None:intergenic | 30.0% |
! | GTTGATAAATGATGCATGTA+TGG | - | chr7_1:74314204-74314223 | Msa1037620:intron | 30.0% |
!! | TTTGAAGAATGATGGATGAA+TGG | - | chr7_1:74314267-74314286 | Msa1037620:intron | 30.0% |
! | TCGATGTAACCTTTATTTAC+GGG | - | chr7_1:74314645-74314664 | Msa1037620:intron | 30.0% |
!! | TTTTTGGTCCATGCAAAAAT+AGG | - | chr7_1:74314812-74314831 | Msa1037620:CDS | 30.0% |
!!! | AAAACTGACCTATTTTTGCA+TGG | + | chr7_1:74314823-74314842 | None:intergenic | 30.0% |
GACAAATCATCACATAATTG+GGG | + | chr7_1:74314981-74315000 | None:intergenic | 30.0% | |
GTGACAAATCATCACATAAT+TGG | + | chr7_1:74314983-74315002 | None:intergenic | 30.0% | |
TGACAAATCATCACATAACT+GGG | - | chr7_1:74315138-74315157 | Msa1037620:CDS | 30.0% | |
! | CTACAAAAATAGGTCAGTTT+TGG | + | chr7_1:74315239-74315258 | None:intergenic | 30.0% |
!!! | CAAAACTGACCTATTTTTGT+AGG | - | chr7_1:74315237-74315256 | Msa1037620:CDS | 30.0% |
!! | TTTTTGGTCCCTACAAAAAT+AGG | + | chr7_1:74315249-74315268 | None:intergenic | 30.0% |
! | TAAAACTGACCTATTTTGCA+GGG | - | chr7_1:74315299-74315318 | Msa1037620:CDS | 30.0% |
CGTGCGTGTATATTTATTTA+AGG | + | chr7_1:74315343-74315362 | None:intergenic | 30.0% | |
!! | AACATGGTCATTGATTTCTA+TGG | + | chr7_1:74315388-74315407 | None:intergenic | 30.0% |
TATACAGTGGTAGAAAAAGT+GGG | + | chr7_1:74315424-74315443 | None:intergenic | 30.0% | |
!!! | TACATTGTTTTGGTATACAG+TGG | + | chr7_1:74315437-74315456 | None:intergenic | 30.0% |
! | ATAGTCAATTTTTGACAGTG+AGG | + | chr7_1:74315496-74315515 | None:intergenic | 30.0% |
CTAAAGAAAACTCTGTTGAA+GGG | - | chr7_1:74315577-74315596 | Msa1037620:intron | 30.0% | |
TAAAGAAAACTCTGTTGAAG+GGG | - | chr7_1:74315578-74315597 | Msa1037620:intron | 30.0% | |
GAAAGTGAAAGAGTTTAACA+TGG | - | chr7_1:74315620-74315639 | Msa1037620:intron | 30.0% | |
! | GGAAACACTCAAAAGAATTT+TGG | - | chr7_1:74315698-74315717 | Msa1037620:intron | 30.0% |
! | GCTGAATATTTGCAGAATTT+TGG | - | chr7_1:74315735-74315754 | Msa1037620:intron | 30.0% |
CTTAAAGACATAGTGGTAAT+AGG | + | chr7_1:74315885-74315904 | None:intergenic | 30.0% | |
CTATTACCACTATGTCTTTA+AGG | - | chr7_1:74315883-74315902 | Msa1037620:intron | 30.0% | |
TCAAGGACTAATTAGATGAA+GGG | + | chr7_1:74315948-74315967 | None:intergenic | 30.0% | |
TTCAAGGACTAATTAGATGA+AGG | + | chr7_1:74315949-74315968 | None:intergenic | 30.0% | |
AGCGAAAATTTATGAGTTCA+AGG | + | chr7_1:74315965-74315984 | None:intergenic | 30.0% | |
TCAAACAATTCATCATTCCA+TGG | + | chr7_1:74316044-74316063 | None:intergenic | 30.0% | |
AAACCACAATGCAGATATAT+CGG | - | chr7_1:74316063-74316082 | Msa1037620:intron | 30.0% | |
ATAAACAACGGAAAATGATG+CGG | - | chr7_1:74316268-74316287 | Msa1037620:CDS | 30.0% | |
CAACTGTCAAATGTTATAGT+TGG | - | chr7_1:74316412-74316431 | Msa1037620:CDS | 30.0% | |
GTTTCCTATAAAAAATGGGA+AGG | - | chr7_1:74316566-74316585 | Msa1037620:intron | 30.0% | |
!!! | AAAGCCTTCCCATTTTTTAT+AGG | + | chr7_1:74316573-74316592 | None:intergenic | 30.0% |
AGCAAACAGTTCAAAACAAA+AGG | - | chr7_1:74316609-74316628 | Msa1037620:intron | 30.0% | |
GCAAACAGTTCAAAACAAAA+GGG | - | chr7_1:74316610-74316629 | Msa1037620:intron | 30.0% | |
CAAACAGTTCAAAACAAAAG+GGG | - | chr7_1:74316611-74316630 | Msa1037620:intron | 30.0% | |
AAACAGTTCAAAACAAAAGG+GGG | - | chr7_1:74316612-74316631 | Msa1037620:intron | 30.0% | |
TTCATTGCATGTTTGTAAGA+TGG | + | chr7_1:74316678-74316697 | None:intergenic | 30.0% | |
ATCTTACAAACATGCAATGA+AGG | - | chr7_1:74316677-74316696 | Msa1037620:intron | 30.0% | |
CCATAAATGTACTTTGCATT+GGG | + | chr7_1:74317047-74317066 | None:intergenic | 30.0% | |
TACATTTATGGCATTATGAC+AGG | - | chr7_1:74317056-74317075 | Msa1037620:intron | 30.0% | |
AACCATATTTGGTAAAACTG+AGG | - | chr7_1:74317087-74317106 | Msa1037620:intron | 30.0% | |
AACTCAAAGTAACCAATTTG+AGG | + | chr7_1:74317227-74317246 | None:intergenic | 30.0% | |
ATAATTGAGTACTTACCTGT+TGG | + | chr7_1:74317362-74317381 | None:intergenic | 30.0% | |
GTAAGTACTCAATTATTGTC+CGG | - | chr7_1:74317366-74317385 | Msa1037620:intron | 30.0% | |
ATGTGGGTCACATATATATT+TGG | + | chr7_1:74317630-74317649 | None:intergenic | 30.0% | |
TAGATCACATCAAATCATGT+GGG | + | chr7_1:74317646-74317665 | None:intergenic | 30.0% | |
ATAGATCACATCAAATCATG+TGG | + | chr7_1:74317647-74317666 | None:intergenic | 30.0% | |
ACCATAAAACATTTCACAAC+TGG | - | chr7_1:74318025-74318044 | Msa1037620:intron | 30.0% | |
! | TCCAGTTGTGAAATGTTTTA+TGG | + | chr7_1:74318029-74318048 | None:intergenic | 30.0% |
TTTAACATTAGGGGTCAAAA+AGG | + | chr7_1:74318200-74318219 | None:intergenic | 30.0% | |
!! | TATAAAAGTGCCATGAATCA+TGG | + | chr7_1:74318670-74318689 | None:intergenic | 30.0% |
ATGAAATTATGATGTGTCCT+TGG | + | chr7_1:74318743-74318762 | None:intergenic | 30.0% | |
AACCTGAAATTTAGTCACAA+AGG | + | chr7_1:74318970-74318989 | None:intergenic | 30.0% | |
!! | TTTCAGGTTTATACAGGTAT+AGG | - | chr7_1:74318981-74319000 | Msa1037620:intron | 30.0% |
! | CTACGAATAAACTTTAGTTC+TGG | + | chr7_1:74319049-74319068 | None:intergenic | 30.0% |
CAGAACTAAAGTTTATTCGT+AGG | - | chr7_1:74319047-74319066 | Msa1037620:intron | 30.0% | |
GTTCTTTGGATAAATCAACA+TGG | + | chr7_1:74319192-74319211 | None:intergenic | 30.0% | |
TTGATTTATCCAAAGAACCA+GGG | - | chr7_1:74319194-74319213 | Msa1037620:intron | 30.0% | |
TATAAAACACCAAGATGTGT+AGG | - | chr7_1:74319430-74319449 | Msa1037620:five_prime_UTR | 30.0% | |
CAAAAACAAAACATGTGGAG+TGG | + | chr7_1:74312409-74312428 | None:intergenic | 35.0% | |
!!! | CACTCCACATGTTTTGTTTT+TGG | - | chr7_1:74312407-74312426 | Msa1037620:three_prime_UTR | 35.0% |
TGGGAGATGGAATAGTAAAT+TGG | + | chr7_1:74312442-74312461 | None:intergenic | 35.0% | |
GGAAATAATTGGTTGTGACT+TGG | + | chr7_1:74312580-74312599 | None:intergenic | 35.0% | |
CAGAGACAGAGTATAGTATT+AGG | + | chr7_1:74312611-74312630 | None:intergenic | 35.0% | |
CTAGTGAGTTTGTGTATGTA+TGG | + | chr7_1:74312636-74312655 | None:intergenic | 35.0% | |
! | GCTGACTCTAATTCCAATTA+AGG | + | chr7_1:74312661-74312680 | None:intergenic | 35.0% |
! | AACCTTCCTTTTCATCCAAT+TGG | - | chr7_1:74312693-74312712 | Msa1037620:CDS | 35.0% |
AAGTGACCAATTGGATGAAA+AGG | + | chr7_1:74312702-74312721 | None:intergenic | 35.0% | |
GCTAAAGTTTATAGTACCTG+GGG | + | chr7_1:74312765-74312784 | None:intergenic | 35.0% | |
!! | ATTTGGACTAGCAATAAGAG+TGG | + | chr7_1:74313042-74313061 | None:intergenic | 35.0% |
TTTGATGCCTAGAGTAATAG+TGG | + | chr7_1:74313110-74313129 | None:intergenic | 35.0% | |
!! | TGGCTCTAATCCAATTTGAT+TGG | - | chr7_1:74313216-74313235 | Msa1037620:intron | 35.0% |
GATCTTTGCTAAGCCTAAAT+TGG | - | chr7_1:74313650-74313669 | Msa1037620:intron | 35.0% | |
! | ATATCCGACCTTATTTGGTT+AGG | - | chr7_1:74313780-74313799 | Msa1037620:intron | 35.0% |
CAAACCTAACCAAATAAGGT+CGG | + | chr7_1:74313787-74313806 | None:intergenic | 35.0% | |
TGAACCAAACCAAACTAGAT+CGG | + | chr7_1:74313833-74313852 | None:intergenic | 35.0% | |
!! | ATCTAGTTTGGTTTGGTTCA+TGG | - | chr7_1:74313833-74313852 | Msa1037620:intron | 35.0% |
TGAAGATGAGAGAAAGTGAA+TGG | + | chr7_1:74313990-74314009 | None:intergenic | 35.0% | |
CATGAAATTGATGTGGTTGA+CGG | + | chr7_1:74314059-74314078 | None:intergenic | 35.0% | |
!! | AATGATGGATGAATGGATCT+TGG | - | chr7_1:74314274-74314293 | Msa1037620:intron | 35.0% |
AGAAACCGAACCAAACTAAT+CGG | + | chr7_1:74314466-74314485 | None:intergenic | 35.0% | |
! | TGTAGTAATTAGGGGTGTAA+CGG | + | chr7_1:74314582-74314601 | None:intergenic | 35.0% |
CACCCCTAATTACTACAATT+TGG | - | chr7_1:74314585-74314604 | Msa1037620:intron | 35.0% | |
CTTTAGTGTTCCTATCTCAA+AGG | - | chr7_1:74314621-74314640 | Msa1037620:intron | 35.0% | |
!! | TTACATCGAACCTTTGAGAT+AGG | + | chr7_1:74314634-74314653 | None:intergenic | 35.0% |
! | CAAAACTGACCTATTTTGCA+GGG | + | chr7_1:74314763-74314782 | None:intergenic | 35.0% |
!! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr7_1:74314872-74314891 | Msa1037620:CDS | 35.0% |
!!! | AAAACTGGCCTATTTTTGCA+GGG | + | chr7_1:74314883-74314902 | None:intergenic | 35.0% |
!!! | TTGTCACTTTTGTGCATATG+TGG | - | chr7_1:74314996-74315015 | Msa1037620:CDS | 35.0% |
GTGACAAATCATCACATAAC+TGG | - | chr7_1:74315137-74315156 | Msa1037620:CDS | 35.0% | |
GACAAATCATCACATAACTG+GGG | - | chr7_1:74315139-74315158 | Msa1037620:CDS | 35.0% | |
! | CTAAAACTGACCTATTTTGC+AGG | - | chr7_1:74315298-74315317 | Msa1037620:CDS | 35.0% |
GTATACAGTGGTAGAAAAAG+TGG | + | chr7_1:74315425-74315444 | None:intergenic | 35.0% | |
GCTAAAGAAAACTCTGTTGA+AGG | - | chr7_1:74315576-74315595 | Msa1037620:intron | 35.0% | |
!!! | TTGCAGAATTTTGGTCTTGA+TGG | - | chr7_1:74315744-74315763 | Msa1037620:intron | 35.0% |
! | ATAGGTTTTCCAGTGAGAAT+GGG | + | chr7_1:74315867-74315886 | None:intergenic | 35.0% |
! | AATAGGTTTTCCAGTGAGAA+TGG | + | chr7_1:74315868-74315887 | None:intergenic | 35.0% |
ACAACACCTTAAAGACATAG+TGG | + | chr7_1:74315892-74315911 | None:intergenic | 35.0% | |
CAAGGACTAATTAGATGAAG+GGG | + | chr7_1:74315947-74315966 | None:intergenic | 35.0% | |
GGAAGCCAAAATATATACCA+TGG | - | chr7_1:74316024-74316043 | Msa1037620:CDS | 35.0% | |
ATCGGCTACTAAACTATGAT+TGG | + | chr7_1:74316245-74316264 | None:intergenic | 35.0% | |
GTAGCCGATTGTATAAACAA+CGG | - | chr7_1:74316256-74316275 | Msa1037620:CDS | 35.0% | |
! | TACCATGCCTTTTTGCTAAT+TGG | - | chr7_1:74316508-74316527 | Msa1037620:intron | 35.0% |
! | CCTTTTTGCTAATTGGAGTT+GGG | - | chr7_1:74316515-74316534 | Msa1037620:intron | 35.0% |
AGTCCAGATGAAGTGATATT+TGG | - | chr7_1:74316720-74316739 | Msa1037620:intron | 35.0% | |
TTTAGACATAGCAGTTCGAA+TGG | + | chr7_1:74316934-74316953 | None:intergenic | 35.0% | |
!! | ATGTTAGCTAGTTCTGGATT+TGG | + | chr7_1:74316966-74316985 | None:intergenic | 35.0% |
TGGATTATGTTAGCTAGTTC+TGG | + | chr7_1:74316972-74316991 | None:intergenic | 35.0% | |
GATGTATAGGATTAAGCAAC+TGG | - | chr7_1:74316997-74317016 | Msa1037620:intron | 35.0% | |
ATAGGATTAAGCAACTGGTA+TGG | - | chr7_1:74317002-74317021 | Msa1037620:intron | 35.0% | |
CCCAATGCAAAGTACATTTA+TGG | - | chr7_1:74317044-74317063 | Msa1037620:intron | 35.0% | |
GCCATAAATGTACTTTGCAT+TGG | + | chr7_1:74317048-74317067 | None:intergenic | 35.0% | |
AGGTTCTATGGAACCATATT+TGG | - | chr7_1:74317076-74317095 | Msa1037620:intron | 35.0% | |
! | TGCCTCAGTTTTACCAAATA+TGG | + | chr7_1:74317092-74317111 | None:intergenic | 35.0% |
! | CCAATTCAGGTGGAATTTTT+GGG | + | chr7_1:74317187-74317206 | None:intergenic | 35.0% |
GTACTAGTGTATTACTACCA+AGG | - | chr7_1:74317437-74317456 | Msa1037620:intron | 35.0% | |
AAAAAAGTAGTTGTGGTCCT+TGG | + | chr7_1:74317457-74317476 | None:intergenic | 35.0% | |
! | ACTTGTGTTAAAGAGTGTGT+TGG | + | chr7_1:74317556-74317575 | None:intergenic | 35.0% |
GATTTACACGTAAGAGAGTA+GGG | + | chr7_1:74317886-74317905 | None:intergenic | 35.0% | |
TGATTTACACGTAAGAGAGT+AGG | + | chr7_1:74317887-74317906 | None:intergenic | 35.0% | |
GCAAAACAATGTTTGTGGTT+TGG | + | chr7_1:74317965-74317984 | None:intergenic | 35.0% | |
AAGTGGCAAAACAATGTTTG+TGG | + | chr7_1:74317970-74317989 | None:intergenic | 35.0% | |
!! | TTTTGCCACTTACTATGAGT+AGG | - | chr7_1:74317979-74317998 | Msa1037620:intron | 35.0% |
GAGATGCTTGAAGTTTAAGT+AGG | - | chr7_1:74318160-74318179 | Msa1037620:intron | 35.0% | |
! | GCTTTTCTTGGAGTTGAAAT+TGG | - | chr7_1:74318601-74318620 | Msa1037620:intron | 35.0% |
! | TGCTATGTCCTTTTCAACTT+TGG | - | chr7_1:74318642-74318661 | Msa1037620:intron | 35.0% |
TCATGGAACCAAAGTTGAAA+AGG | + | chr7_1:74318653-74318672 | None:intergenic | 35.0% | |
! | AACTTTGGTTCCATGATTCA+TGG | - | chr7_1:74318657-74318676 | Msa1037620:intron | 35.0% |
TGTTGATATAACCTATGCCA+AGG | - | chr7_1:74318723-74318742 | Msa1037620:intron | 35.0% | |
! | GATTTTCAGCAAAGTCTCAT+TGG | - | chr7_1:74318827-74318846 | Msa1037620:intron | 35.0% |
CACCTTTGTGACTAAATTTC+AGG | - | chr7_1:74318965-74318984 | Msa1037620:intron | 35.0% | |
GTTTATACAGGTATAGGCTA+GGG | - | chr7_1:74318987-74319006 | Msa1037620:intron | 35.0% | |
TTTATACAGGTATAGGCTAG+GGG | - | chr7_1:74318988-74319007 | Msa1037620:intron | 35.0% | |
!! | TTAGTTCTGGAGTTGAGTTA+TGG | + | chr7_1:74319036-74319055 | None:intergenic | 35.0% |
! | GTTGATTTATCCAAAGAACC+AGG | - | chr7_1:74319193-74319212 | Msa1037620:intron | 35.0% |
! | TAATCTTCTGGGAAATCAGT+GGG | - | chr7_1:74319224-74319243 | Msa1037620:intron | 35.0% |
TCTCGTAAAGTCAACTCTAT+TGG | - | chr7_1:74319322-74319341 | Msa1037620:five_prime_UTR | 35.0% | |
CTTGATCATTACCTTGGATT+AGG | - | chr7_1:74319391-74319410 | Msa1037620:five_prime_UTR | 35.0% | |
GAAGATTCTTTGTTGGGAGA+TGG | + | chr7_1:74312455-74312474 | None:intergenic | 40.0% | |
ATGGCTAGTAGTAGAGTAGT+AGG | + | chr7_1:74312554-74312573 | None:intergenic | 40.0% | |
GACCAATTGGATGAAAAGGA+AGG | + | chr7_1:74312698-74312717 | None:intergenic | 40.0% | |
AAAGTTTATAGTACCTGGGG+TGG | + | chr7_1:74312762-74312781 | None:intergenic | 40.0% | |
TACAAAGCAGTGGTAACTGT+GGG | + | chr7_1:74312834-74312853 | None:intergenic | 40.0% | |
ATACAAAGCAGTGGTAACTG+TGG | + | chr7_1:74312835-74312854 | None:intergenic | 40.0% | |
! | ATTACTACTAGGGGTGTAAG+TGG | - | chr7_1:74313706-74313725 | Msa1037620:intron | 40.0% |
!! | TTTGGTTCGGTTTGGACTTT+CGG | + | chr7_1:74313752-74313771 | None:intergenic | 40.0% |
!!! | TTTTTCGGTTTGGTTCGGTT+TGG | + | chr7_1:74313760-74313779 | None:intergenic | 40.0% |
!!! | GGTCGGATATTTTTTCGGTT+TGG | + | chr7_1:74313770-74313789 | None:intergenic | 40.0% |
! | TAGATCGGTTTCGATTGGTT+CGG | + | chr7_1:74313818-74313837 | None:intergenic | 40.0% |
! | CAAACTAGATCGGTTTCGAT+TGG | + | chr7_1:74313823-74313842 | None:intergenic | 40.0% |
CAATCGAAACCGATCTAGTT+TGG | - | chr7_1:74313821-74313840 | Msa1037620:intron | 40.0% | |
! | GAAACCGATCTAGTTTGGTT+TGG | - | chr7_1:74313826-74313845 | Msa1037620:intron | 40.0% |
! | TTATCATCGGATCGGTTCAT+CGG | + | chr7_1:74313883-74313902 | None:intergenic | 40.0% |
! | GAGTGTTGTTATCATCGGAT+CGG | + | chr7_1:74313891-74313910 | None:intergenic | 40.0% |
TCCTACCACACACAAACTTA+TGG | - | chr7_1:74313929-74313948 | Msa1037620:intron | 40.0% | |
ACCATAAGTTTGTGTGTGGT+AGG | + | chr7_1:74313933-74313952 | None:intergenic | 40.0% | |
CCTAACCATAAGTTTGTGTG+TGG | + | chr7_1:74313937-74313956 | None:intergenic | 40.0% | |
CCACACACAAACTTATGGTT+AGG | - | chr7_1:74313934-74313953 | Msa1037620:intron | 40.0% | |
ATGAAAGAGTCTGACTGATG+AGG | + | chr7_1:74314013-74314032 | None:intergenic | 40.0% | |
!! | TTTGGATTGGTTCGGTTGAT+CGG | + | chr7_1:74314433-74314452 | None:intergenic | 40.0% |
!! | CCAAACTAATCGGTTTGGTT+CGG | + | chr7_1:74314456-74314475 | None:intergenic | 40.0% |
!! | CCAAACCGATTAGTTTGGTT+CGG | - | chr7_1:74314458-74314477 | Msa1037620:intron | 40.0% |
!! | TTCATCGGTTTGGATTGGTT+CGG | + | chr7_1:74314509-74314528 | None:intergenic | 40.0% |
!! | AAACCTTCATCGGTTTGGAT+TGG | + | chr7_1:74314514-74314533 | None:intergenic | 40.0% |
! | CAATGAAACCTTCATCGGTT+TGG | + | chr7_1:74314519-74314538 | None:intergenic | 40.0% |
CAAACCGATGAAGGTTTCAT+TGG | - | chr7_1:74314517-74314536 | Msa1037620:intron | 40.0% | |
CGAACCAATGAAACCTTCAT+CGG | + | chr7_1:74314524-74314543 | None:intergenic | 40.0% | |
! | CGATGAAGGTTTCATTGGTT+CGG | - | chr7_1:74314522-74314541 | Msa1037620:intron | 40.0% |
! | TAATTAGGGGTGTAACGGTT+CGG | + | chr7_1:74314577-74314596 | None:intergenic | 40.0% |
GATAAGGGTCCCGTAAATAA+AGG | + | chr7_1:74314657-74314676 | None:intergenic | 40.0% | |
! | CCAAAACTGACCTATTTTGC+AGG | + | chr7_1:74314764-74314783 | None:intergenic | 40.0% |
! | CCTGCAAAATAGGTCAGTTT+TGG | - | chr7_1:74314761-74314780 | Msa1037620:CDS | 40.0% |
!!! | CAAAACTGGCCTATTTTTGC+AGG | + | chr7_1:74314884-74314903 | None:intergenic | 40.0% |
! | CTGCAAAAATAGGCCAGTTT+TGG | - | chr7_1:74314882-74314901 | Msa1037620:CDS | 40.0% |
TCATCACATAATTGGGGTCA+GGG | + | chr7_1:74314975-74314994 | None:intergenic | 40.0% | |
ATCATCACATAATTGGGGTC+AGG | + | chr7_1:74314976-74314995 | None:intergenic | 40.0% | |
AAGTCTTTGTGAGTAGCTAG+TGG | + | chr7_1:74315804-74315823 | None:intergenic | 40.0% | |
ACTAGCTACTCACAAAGACT+TGG | - | chr7_1:74315803-74315822 | Msa1037620:intron | 40.0% | |
AGATGAAGACCTGTTCCTAT+AGG | + | chr7_1:74316099-74316118 | None:intergenic | 40.0% | |
TGTTCATCAGTCATGCTATG+TGG | + | chr7_1:74316358-74316377 | None:intergenic | 40.0% | |
CTCCAATTAGCAAAAAGGCA+TGG | + | chr7_1:74316513-74316532 | None:intergenic | 40.0% | |
! | GCCTTTTTGCTAATTGGAGT+TGG | - | chr7_1:74316514-74316533 | Msa1037620:intron | 40.0% |
CCCAACTCCAATTAGCAAAA+AGG | + | chr7_1:74316518-74316537 | None:intergenic | 40.0% | |
ATAGGAAACTCTCTGCAGAA+AGG | + | chr7_1:74316555-74316574 | None:intergenic | 40.0% | |
CCAGATGAAGTGATATTTGG+CGG | - | chr7_1:74316723-74316742 | Msa1037620:intron | 40.0% | |
ATACCAATTGAACTTCCTCG+CGG | + | chr7_1:74316797-74316816 | None:intergenic | 40.0% | |
TCAGAGCCTTTGAACAAGTT+TGG | - | chr7_1:74316850-74316869 | Msa1037620:intron | 40.0% | |
CAGAGCCTTTGAACAAGTTT+GGG | - | chr7_1:74316851-74316870 | Msa1037620:intron | 40.0% | |
! | CTCTTCCCAAACTTGTTCAA+AGG | + | chr7_1:74316859-74316878 | None:intergenic | 40.0% |
TTTGCATTGGGAAAAAGCTC+TGG | + | chr7_1:74317035-74317054 | None:intergenic | 40.0% | |
TGGCATTATGACAGGTTCTA+TGG | - | chr7_1:74317064-74317083 | Msa1037620:intron | 40.0% | |
CCCAAAAATTCCACCTGAAT+TGG | - | chr7_1:74317184-74317203 | Msa1037620:intron | 40.0% | |
! | GCCAATTCAGGTGGAATTTT+TGG | + | chr7_1:74317188-74317207 | None:intergenic | 40.0% |
ACAGCATAAGTTGCCAATTC+AGG | + | chr7_1:74317200-74317219 | None:intergenic | 40.0% | |
TATGCTGTGCTTCCTCAAAT+TGG | - | chr7_1:74317212-74317231 | Msa1037620:intron | 40.0% | |
ATTGTTATGACCACTCCAAC+AGG | - | chr7_1:74317344-74317363 | Msa1037620:intron | 40.0% | |
! | TGTGTTAAAGAGTGTGTTGG+TGG | + | chr7_1:74317553-74317572 | None:intergenic | 40.0% |
! | TACGAATGTTACTTGCACTG+TGG | - | chr7_1:74317733-74317752 | Msa1037620:intron | 40.0% |
TGGCGCATAGTATAAAACTG+TGG | - | chr7_1:74317753-74317772 | Msa1037620:intron | 40.0% | |
GGCGCATAGTATAAAACTGT+GGG | - | chr7_1:74317754-74317773 | Msa1037620:intron | 40.0% | |
ATCTGCCTACTCATAGTAAG+TGG | + | chr7_1:74317987-74318006 | None:intergenic | 40.0% | |
GCAGATTGTTAGTGCAAGTT+TGG | - | chr7_1:74318001-74318020 | Msa1037620:intron | 40.0% | |
TTAAATGCTCTTGGCACCTT+AGG | - | chr7_1:74318079-74318098 | Msa1037620:intron | 40.0% | |
!! | TCTCTTAACTGTGCTACTTC+AGG | + | chr7_1:74318240-74318259 | None:intergenic | 40.0% |
TATGACACGTGCTTACTTTG+TGG | - | chr7_1:74318401-74318420 | Msa1037620:intron | 40.0% | |
! | TTGGTGGTTTGACCATCTTT+GGG | - | chr7_1:74318440-74318459 | Msa1037620:intron | 40.0% |
GTCTAATTTGGTCCCAAAGA+TGG | + | chr7_1:74318455-74318474 | None:intergenic | 40.0% | |
TGAAAAGGACATAGCAGATG+AGG | + | chr7_1:74318638-74318657 | None:intergenic | 40.0% | |
TTATGATGTGTCCTTGGCAT+AGG | + | chr7_1:74318737-74318756 | None:intergenic | 40.0% | |
GGTTTATACAGGTATAGGCT+AGG | - | chr7_1:74318986-74319005 | Msa1037620:intron | 40.0% | |
AGGGGATGTGGTAAAAGTTA+TGG | - | chr7_1:74319006-74319025 | Msa1037620:intron | 40.0% | |
GGGGATGTGGTAAAAGTTAT+GGG | - | chr7_1:74319007-74319026 | Msa1037620:intron | 40.0% | |
GAAAGATTTACAGTTAGCCG+TGG | - | chr7_1:74319111-74319130 | Msa1037620:intron | 40.0% | |
AGGGAACTACGTAATCTTCT+GGG | - | chr7_1:74319213-74319232 | Msa1037620:intron | 40.0% | |
! | GTAATCTTCTGGGAAATCAG+TGG | - | chr7_1:74319223-74319242 | Msa1037620:intron | 40.0% |
! | AATCTTCTGGGAAATCAGTG+GGG | - | chr7_1:74319225-74319244 | Msa1037620:intron | 40.0% |
CTATTGGAGCCTTAGAACTT+CGG | - | chr7_1:74319338-74319357 | Msa1037620:five_prime_UTR | 40.0% | |
TATTGGAGCCTTAGAACTTC+GGG | - | chr7_1:74319339-74319358 | Msa1037620:five_prime_UTR | 40.0% | |
TAACAGCTGTTCCTAATCCA+AGG | + | chr7_1:74319405-74319424 | None:intergenic | 40.0% | |
TGCAACACAATGTTGTGTGT+AGG | + | chr7_1:74319457-74319476 | None:intergenic | 40.0% | |
GCTAGTAGTAGAGTAGTAGG+TGG | + | chr7_1:74312551-74312570 | None:intergenic | 45.0% | |
! | ATTGGTTGTGACTTGGCACA+TGG | + | chr7_1:74312573-74312592 | None:intergenic | 45.0% |
ACAAAGCAGTGGTAACTGTG+GGG | + | chr7_1:74312833-74312852 | None:intergenic | 45.0% | |
! | TACTAGGGGTGTAAGTGGTT+CGG | - | chr7_1:74313711-74313730 | Msa1037620:intron | 45.0% |
GTTTGGACTTTCGGTTTCGT+TGG | + | chr7_1:74313743-74313762 | None:intergenic | 45.0% | |
AATTGATGTGGTTGACGGCT+AGG | + | chr7_1:74314054-74314073 | None:intergenic | 45.0% | |
!! | TGGTTCGGTTTGGATTGGTT+CGG | + | chr7_1:74314441-74314460 | None:intergenic | 45.0% |
!! | CTAATCGGTTTGGTTCGGTT+TGG | + | chr7_1:74314451-74314470 | None:intergenic | 45.0% |
! | CCGAACCAAACCGATTAGTT+TGG | - | chr7_1:74314453-74314472 | Msa1037620:intron | 45.0% |
CCGAACCAAACTAATCGGTT+TGG | + | chr7_1:74314461-74314480 | None:intergenic | 45.0% | |
GAACCAATCCAAACCGATGA+AGG | - | chr7_1:74314508-74314527 | Msa1037620:intron | 45.0% | |
! | TGTAACGGTTCGGATTGGAT+TGG | + | chr7_1:74314567-74314586 | None:intergenic | 45.0% |
!! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr7_1:74314751-74314770 | Msa1037620:CDS | 45.0% |
GCAGGGACTAAAACCAAAAC+TGG | + | chr7_1:74314898-74314917 | None:intergenic | 45.0% | |
TCATCACATAACTGGGGTCA+TGG | - | chr7_1:74315145-74315164 | Msa1037620:CDS | 45.0% | |
CATCACATAACTGGGGTCAT+GGG | - | chr7_1:74315146-74315165 | Msa1037620:CDS | 45.0% | |
GGAATTGGTCCCTGCAAAAT+AGG | + | chr7_1:74315311-74315330 | None:intergenic | 45.0% | |
AAGATGCAGAAAGGGTTCAG+AGG | - | chr7_1:74315676-74315695 | Msa1037620:intron | 45.0% | |
AGATGCAGAAAGGGTTCAGA+GGG | - | chr7_1:74315677-74315696 | Msa1037620:intron | 45.0% | |
GGTCCGATATATCTGCATTG+TGG | + | chr7_1:74316069-74316088 | None:intergenic | 45.0% | |
! | ATCGGACCTCTTTTGCCTAT+AGG | - | chr7_1:74316081-74316100 | Msa1037620:intron | 45.0% |
CCTGTTCCTATAGGCAAAAG+AGG | + | chr7_1:74316090-74316109 | None:intergenic | 45.0% | |
! | CCTCTTTTGCCTATAGGAAC+AGG | - | chr7_1:74316087-74316106 | Msa1037620:intron | 45.0% |
CCGCCAAATATCACTTCATC+TGG | + | chr7_1:74316726-74316745 | None:intergenic | 45.0% | |
TTTCCGCGAGGAAGTTCAAT+TGG | - | chr7_1:74316791-74316810 | Msa1037620:intron | 45.0% | |
GACATAGCAGTTCGAATGGA+GGG | + | chr7_1:74316930-74316949 | None:intergenic | 45.0% | |
AGACATAGCAGTTCGAATGG+AGG | + | chr7_1:74316931-74316950 | None:intergenic | 45.0% | |
! | GTAAAACTGAGGCACTATGC+AGG | - | chr7_1:74317098-74317117 | Msa1037620:intron | 45.0% |
CCATAGTCAGCAGTACACAA+AGG | + | chr7_1:74317131-74317150 | None:intergenic | 45.0% | |
! | CCTTTGTGTACTGCTGACTA+TGG | - | chr7_1:74317128-74317147 | Msa1037620:intron | 45.0% |
CTGACTATGGAGCTTCTGAA+GGG | - | chr7_1:74317141-74317160 | Msa1037620:intron | 45.0% | |
GCATAAGTTGCCAATTCAGG+TGG | + | chr7_1:74317197-74317216 | None:intergenic | 45.0% | |
TCATTCTCAAGCTGTGTGAG+AGG | + | chr7_1:74317254-74317273 | None:intergenic | 45.0% | |
CCTTTGTGTTAATCCTCAGC+CGG | - | chr7_1:74317283-74317302 | Msa1037620:intron | 45.0% | |
GGACTCACTGAGGTTAAAGT+TGG | - | chr7_1:74317308-74317327 | Msa1037620:intron | 45.0% | |
TGAGTACTTACCTGTTGGAG+TGG | + | chr7_1:74317357-74317376 | None:intergenic | 45.0% | |
TCATACTGCGAATGTGATGC+TGG | - | chr7_1:74317483-74317502 | Msa1037620:intron | 45.0% | |
! | CTTGGTGGTTTGACCATCTT+TGG | - | chr7_1:74318439-74318458 | Msa1037620:intron | 45.0% |
! | TAATTTTGCCGCTGCTTCCA+CGG | + | chr7_1:74319131-74319150 | None:intergenic | 45.0% |
! | TACGTAGTTCCCTGGTTCTT+TGG | + | chr7_1:74319206-74319225 | None:intergenic | 45.0% |
CAGAAGATTACGTAGTTCCC+TGG | + | chr7_1:74319214-74319233 | None:intergenic | 45.0% | |
CAGGGAACTACGTAATCTTC+TGG | - | chr7_1:74319212-74319231 | Msa1037620:intron | 45.0% | |
GAGTGAATGCTGCAACTGTT+TGG | - | chr7_1:74319267-74319286 | Msa1037620:intron | 45.0% | |
! | GACAAGTCTTTTGTCGATGC+AGG | - | chr7_1:74319289-74319308 | Msa1037620:intron | 45.0% |
CCTAACAACCCGAAGTTCTA+AGG | + | chr7_1:74319350-74319369 | None:intergenic | 45.0% | |
!! | CCTTAGAACTTCGGGTTGTT+AGG | - | chr7_1:74319347-74319366 | Msa1037620:five_prime_UTR | 45.0% |
!! | GAACTTCGGGTTGTTAGGAA+AGG | - | chr7_1:74319352-74319371 | Msa1037620:five_prime_UTR | 45.0% |
TGTGTAGGACCTACACATCT+TGG | + | chr7_1:74319442-74319461 | None:intergenic | 45.0% | |
CCTACCTGCCCAAGTATATT+CGG | - | chr7_1:74319658-74319677 | Msa1037620:five_prime_UTR | 45.0% | |
!!! | ATTTTATAAAATTTTTTTTG+GGG | + | chr7_1:74313255-74313274 | None:intergenic | 5.0% |
!!! | GATTTTATAAAATTTTTTTT+GGG | + | chr7_1:74313256-74313275 | None:intergenic | 5.0% |
!!! | TGATTTTATAAAATTTTTTT+TGG | + | chr7_1:74313257-74313276 | None:intergenic | 5.0% |
!!! | TTTTATAAAATCATTTTTAT+TGG | - | chr7_1:74313264-74313283 | Msa1037620:intron | 5.0% |
!!! | TAAATTTTTTTTATAGTTTT+TGG | - | chr7_1:74314796-74314815 | Msa1037620:CDS | 5.0% |
!!! | AATTTTTTTTTTATAGTTTT+TGG | - | chr7_1:74314919-74314938 | Msa1037620:CDS | 5.0% |
!!! | AAATTTTTTTTTATAGTTTT+TGG | + | chr7_1:74315265-74315284 | None:intergenic | 5.0% |
!! | AGTTAAAAAAAAAAAAAAAA+AGG | - | chr7_1:74319587-74319606 | Msa1037620:five_prime_UTR | 5.0% |
GAGTAGTAGGTGGTGTGTTG+TGG | + | chr7_1:74312541-74312560 | None:intergenic | 50.0% | |
ACTAAATTCTCTGCCACCCC+AGG | - | chr7_1:74312746-74312765 | Msa1037620:CDS | 50.0% | |
!! | GGATCGGTTCATCGGTTTCA+CGG | + | chr7_1:74313875-74313894 | None:intergenic | 50.0% |
!! | CGGTTTGGTTCGGTTTGGAT+TGG | + | chr7_1:74314446-74314465 | None:intergenic | 50.0% |
! | CTGTTGAAGGGGTGTGAGTT+AGG | - | chr7_1:74315589-74315608 | Msa1037620:intron | 50.0% |
GATGCTTCTCCCATTCTCAC+TGG | - | chr7_1:74315855-74315874 | Msa1037620:intron | 50.0% | |
GAACCGTACTCTTGCAGTTC+TGG | - | chr7_1:74315990-74316009 | Msa1037620:CDS | 50.0% | |
GTGCCAGAACTGCAAGAGTA+CGG | + | chr7_1:74315996-74316015 | None:intergenic | 50.0% | |
!! | ATGCGGACTAATTTTCCGCG+AGG | - | chr7_1:74316779-74316798 | Msa1037620:intron | 50.0% |
AGCAGTTCGAATGGAGGGAA+CGG | + | chr7_1:74316925-74316944 | None:intergenic | 50.0% | |
GCTGACTATGGAGCTTCTGA+AGG | - | chr7_1:74317140-74317159 | Msa1037620:intron | 50.0% | |
! | ACTATGGAGCTTCTGAAGGG+TGG | - | chr7_1:74317144-74317163 | Msa1037620:intron | 50.0% |
CCGGCTGAGGATTAACACAA+AGG | + | chr7_1:74317286-74317305 | None:intergenic | 50.0% | |
TTGTGTTAATCCTCAGCCGG+TGG | - | chr7_1:74317286-74317305 | Msa1037620:intron | 50.0% | |
TGTGTTAATCCTCAGCCGGT+GGG | - | chr7_1:74317287-74317306 | Msa1037620:intron | 50.0% | |
TTAACCTCAGTGAGTCCCAC+CGG | + | chr7_1:74317305-74317324 | None:intergenic | 50.0% | |
ACTGGGTCTAGGGAAGCAAA+TGG | + | chr7_1:74317931-74317950 | None:intergenic | 50.0% | |
ATTTGCTTCCCTAGACCCAG+TGG | - | chr7_1:74317930-74317949 | Msa1037620:intron | 50.0% | |
TCCATTGACCACTGGGTCTA+GGG | + | chr7_1:74317941-74317960 | None:intergenic | 50.0% | |
! | GTTTGGCTCCATTGACCACT+GGG | + | chr7_1:74317948-74317967 | None:intergenic | 50.0% |
GGACATAGCAGATGAGGTCA+AGG | + | chr7_1:74318632-74318651 | None:intergenic | 50.0% | |
CCGAATATACTTGGGCAGGT+AGG | + | chr7_1:74319661-74319680 | None:intergenic | 50.0% | |
! | AGGGGTGTAACGGTTCGGAT+TGG | + | chr7_1:74314572-74314591 | None:intergenic | 55.0% |
! | TGCAGTTCTGGCACTACGCA+AGG | - | chr7_1:74316002-74316021 | Msa1037620:CDS | 55.0% |
! | GCAGTTCTGGCACTACGCAA+GGG | - | chr7_1:74316003-74316022 | Msa1037620:CDS | 55.0% |
ACTGCGAATGTGATGCTGGC+AGG | - | chr7_1:74317487-74317506 | Msa1037620:intron | 55.0% | |
TCCCTAGACCCAGTGGTCAA+TGG | - | chr7_1:74317937-74317956 | Msa1037620:intron | 55.0% | |
CTCCATTGACCACTGGGTCT+AGG | + | chr7_1:74317942-74317961 | None:intergenic | 55.0% | |
! | GGTTTGGCTCCATTGACCAC+TGG | + | chr7_1:74317949-74317968 | None:intergenic | 55.0% |
CAGGTATAGGCTAGGGGATG+TGG | - | chr7_1:74318994-74319013 | Msa1037620:intron | 55.0% | |
ACAGTTAGCCGTGGAAGCAG+CGG | - | chr7_1:74319120-74319139 | Msa1037620:intron | 55.0% | |
! | TCAGTGAGTCCCACCGGCTG+AGG | + | chr7_1:74317299-74317318 | None:intergenic | 65.0% |
TCAGCCGGTGGGACTCACTG+AGG | - | chr7_1:74317298-74317317 | Msa1037620:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 74312403 | 74319681 | 74312403 | ID=Msa1037620;Name=Msa1037620 |
chr7_1 | mRNA | 74312403 | 74319681 | 74312403 | ID=Msa1037620-mRNA-1;Parent=Msa1037620;Name=Msa1037620-mRNA-1;_AED=0.11;_eAED=0.11;_QI=407|1|1|1|0.75|0.6|5|153|579 |
chr7_1 | exon | 74312403 | 74313097 | 74312403 | ID=Msa1037620-mRNA-1:exon:18712;Parent=Msa1037620-mRNA-1 |
chr7_1 | exon | 74314719 | 74315521 | 74314719 | ID=Msa1037620-mRNA-1:exon:18711;Parent=Msa1037620-mRNA-1 |
chr7_1 | exon | 74315976 | 74316077 | 74315976 | ID=Msa1037620-mRNA-1:exon:18710;Parent=Msa1037620-mRNA-1 |
chr7_1 | exon | 74316180 | 74316514 | 74316180 | ID=Msa1037620-mRNA-1:exon:18709;Parent=Msa1037620-mRNA-1 |
chr7_1 | exon | 74319317 | 74319681 | 74319317 | ID=Msa1037620-mRNA-1:exon:18708;Parent=Msa1037620-mRNA-1 |
chr7_1 | five_prime_UTR | 74319317 | 74319681 | 74319317 | ID=Msa1037620-mRNA-1:five_prime_utr;Parent=Msa1037620-mRNA-1 |
chr7_1 | five_prime_UTR | 74316473 | 74316514 | 74316473 | ID=Msa1037620-mRNA-1:five_prime_utr;Parent=Msa1037620-mRNA-1 |
chr7_1 | CDS | 74316180 | 74316472 | 74316180 | ID=Msa1037620-mRNA-1:cds;Parent=Msa1037620-mRNA-1 |
chr7_1 | CDS | 74315976 | 74316077 | 74315976 | ID=Msa1037620-mRNA-1:cds;Parent=Msa1037620-mRNA-1 |
chr7_1 | CDS | 74314719 | 74315521 | 74314719 | ID=Msa1037620-mRNA-1:cds;Parent=Msa1037620-mRNA-1 |
chr7_1 | CDS | 74312556 | 74313097 | 74312556 | ID=Msa1037620-mRNA-1:cds;Parent=Msa1037620-mRNA-1 |
chr7_1 | three_prime_UTR | 74312403 | 74312555 | 74312403 | ID=Msa1037620-mRNA-1:three_prime_utr;Parent=Msa1037620-mRNA-1 |
Gene Sequence |
Protein sequence |