AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185490 MtrunA17_Chr8g0351141 92.045 264 21 0 1 264 63 326 0.0 501
Msa1185490 MtrunA17_Chr8g0351121 84.791 263 39 1 2 264 98 359 1.50e-161 452
Msa1185490 MtrunA17_Chr8g0351111 62.835 261 97 0 4 264 63 323 1.30e-123 355
Msa1185490 MtrunA17_Chr7g0246361 58.301 259 94 3 5 263 45 289 5.59e-104 303
Msa1185490 MtrunA17_Chr4g0004681 46.512 258 133 1 7 264 58 310 1.46e-80 244
Msa1185490 MtrunA17_Chr4g0004711 45.977 261 133 2 7 264 58 313 5.19e-80 243
Msa1185490 MtrunA17_Chr4g0004721 44.828 261 136 2 7 264 59 314 2.62e-79 241
Msa1185490 MtrunA17_Chr2g0331641 47.490 259 133 2 7 264 58 314 4.74e-75 231
Msa1185490 MtrunA17_Chr4g0004741 44.444 261 137 2 7 264 58 313 1.28e-66 209
Msa1185490 MtrunA17_Chr3g0077771 28.723 282 166 7 3 259 104 375 2.86e-28 111
Msa1185490 MtrunA17_Chr1g0210971 26.953 256 167 2 24 259 94 349 6.52e-24 99.4
Msa1185490 MtrunA17_Chr4g0000511 26.336 262 170 7 17 262 152 406 3.95e-19 86.7
Msa1185490 MtrunA17_Chr1g0208141 27.234 235 156 6 17 243 119 346 7.37e-18 82.8
Msa1185490 MtrunA17_Chr6g0450811 24.242 264 171 8 6 250 111 364 1.82e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185490 AT2G45630.2 59.004 261 105 2 5 264 79 338 6.10e-110 321
Msa1185490 AT1G12550.1 59.023 266 100 2 2 263 60 320 8.43e-108 315
Msa1185490 AT1G79870.1 46.743 261 131 2 7 264 58 313 3.04e-79 242
Msa1185490 AT1G79870.2 44.186 258 123 2 7 264 58 294 9.24e-69 214
Msa1185490 AT5G28310.1 39.896 193 63 4 74 264 92 233 1.29e-32 119
Msa1185490 AT2G45630.1 57.303 89 37 1 5 93 79 166 3.01e-29 109
Msa1185490 AT1G72190.1 25.843 267 180 4 6 259 105 366 1.41e-27 109
Msa1185490 AT1G68010.1 27.344 256 166 2 24 259 94 349 7.33e-23 96.7
Msa1185490 AT1G68010.3 28.295 258 164 3 24 260 94 351 7.60e-23 96.3
Msa1185490 AT1G68010.2 27.237 257 166 3 24 259 94 350 3.27e-21 92.0
Msa1185490 AT1G17745.1 25.660 265 172 7 17 264 146 402 4.08e-20 90.1
Msa1185490 AT3G19480.1 27.668 253 172 5 17 263 110 357 9.84e-19 85.9
Msa1185490 AT4G34200.1 25.591 254 176 5 17 263 125 372 2.20e-18 84.7
Msa1185490 AT1G17745.2 24.042 287 176 7 17 264 146 429 2.97e-17 81.6
Msa1185490 AT5G14780.2 24.206 252 172 6 22 261 111 355 8.18e-17 79.7
Msa1185490 AT5G14780.3 24.206 252 172 6 22 261 99 343 8.83e-17 79.3
Msa1185490 AT5G14780.1 24.206 252 172 6 22 261 125 369 1.23e-16 79.0

Find 107 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGAAGATGTTGCTGATA+TGG 0.254694 8_1:-22696690 Msa1185490:CDS
AAGAACTCTTTAGGAACATT+AGG 0.281582 8_1:+22695191 None:intergenic
TTACTGGTGTTTCAGATATC+AGG 0.305036 8_1:-22695566 Msa1185490:intron
GAGAAGATGGGTTTATGATA+TGG 0.312632 8_1:+22696927 None:intergenic
TTGAGATATCCGGGGAGTTC+GGG 0.313544 8_1:+22696971 None:intergenic
TTTGAGATATCCGGGGAGTT+CGG 0.328260 8_1:+22696970 None:intergenic
TCCAATGAAAAGAACTCTTT+AGG 0.329921 8_1:+22695182 None:intergenic
GGACCGTGAAAGAATACTTT+TGG 0.335420 8_1:+22696995 None:intergenic
CATCTCCGCCATTCTCTGTA+TGG 0.338497 8_1:-22696855 Msa1185490:exon
TTCAAATCGACAAGATAATT+AGG 0.338631 8_1:-22694748 Msa1185490:three_prime_UTR
TGGAAGTTGTGAGAAGGTTT+GGG 0.339589 8_1:+22696947 None:intergenic
AATTCAATCAACTATATAAC+TGG 0.342058 8_1:+22695044 None:intergenic
TTCATTGCTTCAGCAGAATC+TGG 0.342838 8_1:+22694665 None:intergenic
TGAAGAGAGGGAAGAGAAGA+TGG 0.346374 8_1:+22696914 None:intergenic
GGTTCAGTCGCCTGCATCTT+GGG 0.351274 8_1:-22696603 Msa1185490:CDS
ATGGAAGTTGTGAGAAGGTT+TGG 0.357334 8_1:+22696946 None:intergenic
ATGTCGGCGACGGGGAATTC+AGG 0.363897 8_1:-22696735 Msa1185490:CDS
TGATATGGCTGTGGCTTTGT+TGG 0.364353 8_1:-22696675 Msa1185490:CDS
TGAGATTGGAGGTGCTGGTT+TGG 0.372193 8_1:-22695231 Msa1185490:CDS
AGGGAGAAGGTGGAGAATTT+CGG 0.376049 8_1:+22696814 None:intergenic
AGGTTTGGGTTTGAGATATC+CGG 0.377280 8_1:+22696961 None:intergenic
AAAGATTGGAATTGTTGGTC+TGG 0.384913 8_1:-22695540 Msa1185490:CDS
TTGAGAAAGCCAAATAAAAC+GGG 0.385338 8_1:+22695013 None:intergenic
ACAGAAGTCATGTTGGCATT+AGG 0.391006 8_1:-22695332 Msa1185490:CDS
TGTTGATGAACTTCTTCTAA+AGG 0.401734 8_1:+22694692 None:intergenic
TTTGAGAAAGCCAAATAAAA+CGG 0.409771 8_1:+22695012 None:intergenic
TGCTTAGTAAATGTTCTAGT+TGG 0.412128 8_1:-22694910 Msa1185490:three_prime_UTR
CTTAACTTCAGAGTCACATA+TGG 0.415771 8_1:-22695129 Msa1185490:CDS
CTTACTCAATATAGCTGATA+AGG 0.416673 8_1:+22694801 None:intergenic
GAGGTCAATGTGATTAGTTC+CGG 0.424802 8_1:+22696763 None:intergenic
ATTGTTGGTCTGGGAAGAAT+TGG 0.427657 8_1:-22695530 Msa1185490:CDS
AGGTGCTCTCATTGATGAAA+AGG 0.435320 8_1:-22695279 Msa1185490:CDS
TGTTTGATTGAAAATGAGAT+TGG 0.437530 8_1:-22695245 Msa1185490:CDS
CTCCCAAAAGTATTCTTTCA+CGG 0.439453 8_1:-22696998 Msa1185490:five_prime_UTR
TGGGAGATTCTTTGTTTCAT+CGG 0.451982 8_1:+22697015 None:intergenic
TCTAACACAGTGGAATAGTA+AGG 0.453055 8_1:+22695425 None:intergenic
AAGATTGGAATTGTTGGTCT+GGG 0.454839 8_1:-22695539 Msa1185490:CDS
TGTTGACAATGTGCCTCGTT+TGG 0.459122 8_1:+22695354 None:intergenic
AACTAGAACATTTACTAAGC+AGG 0.461295 8_1:+22694912 None:intergenic
ATCTCCGCCATTCTCTGTAT+GGG 0.461637 8_1:-22696854 Msa1185490:exon
GCAAAGAGGCTTGAAACATT+CGG 0.463871 8_1:-22695497 Msa1185490:CDS
CCTCGACGTATGTCGGCGAC+GGG 0.472804 8_1:-22696744 Msa1185490:CDS
GGAAGCGTTGTGAGGGTTGG+TGG 0.478456 8_1:+22696880 None:intergenic
CATACAGAGAATGGCGGAGA+TGG 0.484443 8_1:+22696856 None:intergenic
GGTTTGGGTTTGAGATATCC+GGG 0.484535 8_1:+22696962 None:intergenic
AGGTTCAGTCGCCTGCATCT+TGG 0.488282 8_1:-22696604 Msa1185490:CDS
GAAGAGAGGGAAGAGAAGAT+GGG 0.502879 8_1:+22696915 None:intergenic
TAGTAAATGTTCTAGTTGGA+TGG 0.504439 8_1:-22694906 Msa1185490:three_prime_UTR
GTGGCTTTGTTGGTTGATGT+TGG 0.505017 8_1:-22696665 Msa1185490:CDS
TAGTAAGGGTACGAAACTAA+TGG 0.505628 8_1:+22695440 None:intergenic
GAAAATGAGATTGGAGGTGC+TGG 0.505907 8_1:-22695236 Msa1185490:CDS
TTCATCATGACCTCCAGTGC+CGG 0.509827 8_1:-22696782 Msa1185490:CDS
CACTGGAGGTCATGATGAAA+CGG 0.512733 8_1:+22696786 None:intergenic
GGAATTCAGGTCGCTAACGC+TGG 0.514772 8_1:-22696722 Msa1185490:CDS
GGCGGAATCATAGTGAATGT+TGG 0.516959 8_1:-22695305 Msa1185490:CDS
GATATGTTATGTACAATAAG+TGG 0.521544 8_1:-22694970 Msa1185490:three_prime_UTR
AATGTGATTAGTTCCGGCAC+TGG 0.522357 8_1:+22696769 None:intergenic
GCATGATATCATACAACTCT+CGG 0.528430 8_1:-22695472 Msa1185490:CDS
TATGGGTATCTGCCAACTTG+TGG 0.528506 8_1:-22695111 Msa1185490:CDS
CTTTGTTGGTTGATGTTGGT+AGG 0.535021 8_1:-22696661 Msa1185490:CDS
GTCATGTTGGCATTAGGAAA+AGG 0.535996 8_1:-22695326 Msa1185490:CDS
GTCATGATGAAACGGAGGCA+AGG 0.537685 8_1:+22696794 None:intergenic
GGAGGAAGCGTTGTGAGGGT+TGG 0.539878 8_1:+22696877 None:intergenic
ATTGCTTCAGCAGAATCTGG+TGG 0.551300 8_1:+22694668 None:intergenic
ACATTGACCTCGACGTATGT+CGG 0.552622 8_1:-22696751 Msa1185490:CDS
AGTGGAAAATCCCAAGATGC+AGG 0.552755 8_1:+22696593 None:intergenic
CACGGTCCACCCGAACTCCC+CGG 0.553004 8_1:-22696980 Msa1185490:five_prime_UTR
TCATGATGAAACGGAGGCAA+GGG 0.556509 8_1:+22696795 None:intergenic
ACAGAGAATGGCGGAGATGG+AGG 0.560373 8_1:+22696859 None:intergenic
AGATATCCGGGGAGTTCGGG+TGG 0.564287 8_1:+22696974 None:intergenic
TTGATTGAAAATGAGATTGG+AGG 0.564611 8_1:-22695242 Msa1185490:CDS
AAATGTTCTAGTTGGATGGA+AGG 0.565991 8_1:-22694902 Msa1185490:three_prime_UTR
GTAGAGACCCATACAGAGAA+TGG 0.566297 8_1:+22696847 None:intergenic
GGATATGAATCGGTGAAGAG+AGG 0.567951 8_1:+22696901 None:intergenic
GGAGAATTTCGGCGTTGAGA+GGG 0.572565 8_1:+22696825 None:intergenic
ACTAGAACATTTACTAAGCA+GGG 0.575220 8_1:+22694913 None:intergenic
AGATGTTGCTGATATGGCTG+TGG 0.577311 8_1:-22696684 Msa1185490:CDS
ATCATAGTGAATGTTGGAAG+AGG 0.578453 8_1:-22695299 Msa1185490:CDS
GATATGAATCGGTGAAGAGA+GGG 0.578455 8_1:+22696902 None:intergenic
GGAAGATTTCAGCTGCGGAT+CGG 0.579779 8_1:-22696640 Msa1185490:CDS
ATGATATGGAAGTTGTGAGA+AGG 0.580179 8_1:+22696941 None:intergenic
GTGATTAGTTCCGGCACTGG+AGG 0.582358 8_1:+22696772 None:intergenic
AGATGGAGGAAGCGTTGTGA+GGG 0.583632 8_1:+22696873 None:intergenic
TTAACTTCAGAGTCACATAT+GGG 0.586174 8_1:-22695128 Msa1185490:CDS
TGAAACGGAGGCAAGGGAGA+AGG 0.587990 8_1:+22696801 None:intergenic
AACGGAGGCAAGGGAGAAGG+TGG 0.589396 8_1:+22696804 None:intergenic
AGACAGCTGCATGAGGTGAA+AGG 0.593691 8_1:+22695150 None:intergenic
TGGAGAATTTCGGCGTTGAG+AGG 0.594027 8_1:+22696824 None:intergenic
GAGGGTTGGTGGATATGAAT+CGG 0.596256 8_1:+22696891 None:intergenic
GAGATGGAGGAAGCGTTGTG+AGG 0.625480 8_1:+22696872 None:intergenic
GTGATTTAAACGACCAAACG+AGG 0.626563 8_1:-22695367 Msa1185490:CDS
CTAACACAGTGGAATAGTAA+GGG 0.627854 8_1:+22695426 None:intergenic
TTGCAGACCTTAGAACCAAG+TGG 0.630404 8_1:+22696575 None:intergenic
TGGTAGGAAGATTTCAGCTG+CGG 0.633217 8_1:-22696645 Msa1185490:CDS
TATATAACTGGAGTGATCAG+AGG 0.634789 8_1:+22695056 None:intergenic
TGTCAACACAGAAGTCATGT+TGG 0.641258 8_1:-22695339 Msa1185490:CDS
TTGGCTTAGAAGTTGCAAAG+AGG 0.643774 8_1:-22695511 Msa1185490:CDS
GAAGTTAAGACAGCTGCATG+AGG 0.653941 8_1:+22695143 None:intergenic
TGGATGGAAGGTATACATGA+TGG 0.665111 8_1:-22694890 Msa1185490:three_prime_UTR
ATGTTGGCATTAGGAAAAGG+CGG 0.693207 8_1:-22695323 Msa1185490:CDS
CTCGACGTATGTCGGCGACG+GGG 0.693787 8_1:-22696743 Msa1185490:CDS
ACAACAGAGAATGAGTACAC+TGG 0.694649 8_1:+22695388 None:intergenic
TGGAGGTCATGATGAAACGG+AGG 0.697117 8_1:+22696789 None:intergenic
GTTTGGGTTTGAGATATCCG+GGG 0.699938 8_1:+22696963 None:intergenic
GAGACCCATACAGAGAATGG+CGG 0.703371 8_1:+22696850 None:intergenic
TGAGAAAGCCAAATAAAACG+GGG 0.709007 8_1:+22695014 None:intergenic
TGTTGCAAGCTCTAACACAG+TGG 0.748331 8_1:+22695415 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAGTAGATTATCAAAAA+TGG + chr8_1:22695776-22695795 None:intergenic 15.0%
!! TTAAAGTAGATTATCAAAAA+TGG + chr8_1:22695776-22695795 None:intergenic 15.0%
!! ATTAATGATAAACTGAATGA+TGG - chr8_1:22695409-22695428 Msa1185490:CDS 20.0%
!! TTTGAAAGTTAAGATAACTA+TGG - chr8_1:22695573-22695592 Msa1185490:intron 20.0%
!!! TTTGATAATAAACATGTTAC+TGG - chr8_1:22696113-22696132 Msa1185490:intron 20.0%
!! AATTCAATCAACTATATAAC+TGG + chr8_1:22696654-22696673 None:intergenic 20.0%
!! ATTAATGATAAACTGAATGA+TGG - chr8_1:22695409-22695428 Msa1185490:CDS 20.0%
!! TTTGAAAGTTAAGATAACTA+TGG - chr8_1:22695573-22695592 Msa1185490:intron 20.0%
!!! TTTGATAATAAACATGTTAC+TGG - chr8_1:22696113-22696132 Msa1185490:intron 20.0%
!! AATTCAATCAACTATATAAC+TGG + chr8_1:22696654-22696673 None:intergenic 20.0%
!!! TTGTTTTTCTAACATCATGT+GGG + chr8_1:22695335-22695354 None:intergenic 25.0%
!! ATCAAAGTTGTCTTTTCAAA+TGG - chr8_1:22695363-22695382 Msa1185490:CDS 25.0%
! GTAGTGTTTGATAAAGTTAA+CGG - chr8_1:22695456-22695475 Msa1185490:CDS 25.0%
!!! ATTTGTCAGCTAGTTTTATT+AGG + chr8_1:22695513-22695532 None:intergenic 25.0%
! TCAAAAATGGCTATAAGATT+TGG + chr8_1:22695763-22695782 None:intergenic 25.0%
! CTTAGCTTATATTTATTCTC+TGG - chr8_1:22695802-22695821 Msa1185490:intron 25.0%
! AAAGTGAATTTCTATCTACT+AGG + chr8_1:22695914-22695933 None:intergenic 25.0%
!!! GGGAAAAACATATTTTGATA+GGG - chr8_1:22695994-22696013 Msa1185490:intron 25.0%
! TGTTTGATTGAAAATGAGAT+TGG - chr8_1:22696450-22696469 Msa1185490:intron 25.0%
! TTTGAGAAAGCCAAATAAAA+CGG + chr8_1:22696686-22696705 None:intergenic 25.0%
! GATATGTTATGTACAATAAG+TGG - chr8_1:22696725-22696744 Msa1185490:CDS 25.0%
! TTCAAATCGACAAGATAATT+AGG - chr8_1:22696947-22696966 Msa1185490:five_prime_UTR 25.0%
!!! TTGTTTTTCTAACATCATGT+GGG + chr8_1:22695335-22695354 None:intergenic 25.0%
!! ATCAAAGTTGTCTTTTCAAA+TGG - chr8_1:22695363-22695382 Msa1185490:CDS 25.0%
! GTAGTGTTTGATAAAGTTAA+CGG - chr8_1:22695456-22695475 Msa1185490:CDS 25.0%
!!! ATTTGTCAGCTAGTTTTATT+AGG + chr8_1:22695513-22695532 None:intergenic 25.0%
! TCAAAAATGGCTATAAGATT+TGG + chr8_1:22695763-22695782 None:intergenic 25.0%
! CTTAGCTTATATTTATTCTC+TGG - chr8_1:22695802-22695821 Msa1185490:intron 25.0%
! AAAGTGAATTTCTATCTACT+AGG + chr8_1:22695914-22695933 None:intergenic 25.0%
!!! GGGAAAAACATATTTTGATA+GGG - chr8_1:22695994-22696013 Msa1185490:intron 25.0%
! TGTTTGATTGAAAATGAGAT+TGG - chr8_1:22696450-22696469 Msa1185490:intron 25.0%
! TTTGAGAAAGCCAAATAAAA+CGG + chr8_1:22696686-22696705 None:intergenic 25.0%
! GATATGTTATGTACAATAAG+TGG - chr8_1:22696725-22696744 Msa1185490:CDS 25.0%
! TTCAAATCGACAAGATAATT+AGG - chr8_1:22696947-22696966 Msa1185490:five_prime_UTR 25.0%
!! CTTGTTTTTCTAACATCATG+TGG + chr8_1:22695336-22695355 None:intergenic 30.0%
CACATGATGTTAGAAAAACA+AGG - chr8_1:22695334-22695353 Msa1185490:CDS 30.0%
AATTTCAAGGTCATAGAAGA+TGG + chr8_1:22695735-22695754 None:intergenic 30.0%
!! AGATTTGGTTGGTAATTTCA+AGG + chr8_1:22695748-22695767 None:intergenic 30.0%
! AAATGGCTATAAGATTTGGT+TGG + chr8_1:22695759-22695778 None:intergenic 30.0%
!!! GGGGAAAAACATATTTTGAT+AGG - chr8_1:22695993-22696012 Msa1185490:intron 30.0%
! TCATACTAGTGGCATTTTAA+AGG + chr8_1:22696039-22696058 None:intergenic 30.0%
! CATGTCTATTTTCATACTAG+TGG + chr8_1:22696050-22696069 None:intergenic 30.0%
CAGATATCAGGAAAAAAGAT+TGG - chr8_1:22696141-22696160 Msa1185490:intron 30.0%
GGAAAAAAGATTGGAATTGT+TGG - chr8_1:22696150-22696169 Msa1185490:intron 30.0%
TTGATTGAAAATGAGATTGG+AGG - chr8_1:22696453-22696472 Msa1185490:intron 30.0%
! AAGAACTCTTTAGGAACATT+AGG + chr8_1:22696507-22696526 None:intergenic 30.0%
! TCCTAAAGAGTTCTTTTCAT+TGG - chr8_1:22696512-22696531 Msa1185490:intron 30.0%
TCCAATGAAAAGAACTCTTT+AGG + chr8_1:22696516-22696535 None:intergenic 30.0%
TTAACTTCAGAGTCACATAT+GGG - chr8_1:22696567-22696586 Msa1185490:intron 30.0%
! TCAAATTTTGTTCCACAAGT+TGG + chr8_1:22696599-22696618 None:intergenic 30.0%
TTGAGAAAGCCAAATAAAAC+GGG + chr8_1:22696685-22696704 None:intergenic 30.0%
ACTAGAACATTTACTAAGCA+GGG + chr8_1:22696785-22696804 None:intergenic 30.0%
AACTAGAACATTTACTAAGC+AGG + chr8_1:22696786-22696805 None:intergenic 30.0%
TGCTTAGTAAATGTTCTAGT+TGG - chr8_1:22696785-22696804 Msa1185490:CDS 30.0%
! TAGTAAATGTTCTAGTTGGA+TGG - chr8_1:22696789-22696808 Msa1185490:CDS 30.0%
CTTACTCAATATAGCTGATA+AGG + chr8_1:22696897-22696916 None:intergenic 30.0%
! TGTTGATGAACTTCTTCTAA+AGG + chr8_1:22697006-22697025 None:intergenic 30.0%
!! CTTGTTTTTCTAACATCATG+TGG + chr8_1:22695336-22695355 None:intergenic 30.0%
CACATGATGTTAGAAAAACA+AGG - chr8_1:22695334-22695353 Msa1185490:CDS 30.0%
AATTTCAAGGTCATAGAAGA+TGG + chr8_1:22695735-22695754 None:intergenic 30.0%
!! AGATTTGGTTGGTAATTTCA+AGG + chr8_1:22695748-22695767 None:intergenic 30.0%
! AAATGGCTATAAGATTTGGT+TGG + chr8_1:22695759-22695778 None:intergenic 30.0%
!!! GGGGAAAAACATATTTTGAT+AGG - chr8_1:22695993-22696012 Msa1185490:intron 30.0%
! TCATACTAGTGGCATTTTAA+AGG + chr8_1:22696039-22696058 None:intergenic 30.0%
! CATGTCTATTTTCATACTAG+TGG + chr8_1:22696050-22696069 None:intergenic 30.0%
CAGATATCAGGAAAAAAGAT+TGG - chr8_1:22696141-22696160 Msa1185490:intron 30.0%
GGAAAAAAGATTGGAATTGT+TGG - chr8_1:22696150-22696169 Msa1185490:intron 30.0%
TTGATTGAAAATGAGATTGG+AGG - chr8_1:22696453-22696472 Msa1185490:intron 30.0%
! AAGAACTCTTTAGGAACATT+AGG + chr8_1:22696507-22696526 None:intergenic 30.0%
! TCCTAAAGAGTTCTTTTCAT+TGG - chr8_1:22696512-22696531 Msa1185490:intron 30.0%
TCCAATGAAAAGAACTCTTT+AGG + chr8_1:22696516-22696535 None:intergenic 30.0%
TTAACTTCAGAGTCACATAT+GGG - chr8_1:22696567-22696586 Msa1185490:intron 30.0%
! TCAAATTTTGTTCCACAAGT+TGG + chr8_1:22696599-22696618 None:intergenic 30.0%
TTGAGAAAGCCAAATAAAAC+GGG + chr8_1:22696685-22696704 None:intergenic 30.0%
ACTAGAACATTTACTAAGCA+GGG + chr8_1:22696785-22696804 None:intergenic 30.0%
AACTAGAACATTTACTAAGC+AGG + chr8_1:22696786-22696805 None:intergenic 30.0%
TGCTTAGTAAATGTTCTAGT+TGG - chr8_1:22696785-22696804 Msa1185490:CDS 30.0%
! TAGTAAATGTTCTAGTTGGA+TGG - chr8_1:22696789-22696808 Msa1185490:CDS 30.0%
CTTACTCAATATAGCTGATA+AGG + chr8_1:22696897-22696916 None:intergenic 30.0%
! TGTTGATGAACTTCTTCTAA+AGG + chr8_1:22697006-22697025 None:intergenic 30.0%
! TGGGAGATTCTTTGTTTCAT+CGG + chr8_1:22694683-22694702 None:intergenic 35.0%
!! CTCCCAAAAGTATTCTTTCA+CGG - chr8_1:22694697-22694716 Msa1185490:three_prime_UTR 35.0%
! GACCGTGAAAGAATACTTTT+GGG + chr8_1:22694702-22694721 None:intergenic 35.0%
ATGATATGGAAGTTGTGAGA+AGG + chr8_1:22694757-22694776 None:intergenic 35.0%
! GAGAAGATGGGTTTATGATA+TGG + chr8_1:22694771-22694790 None:intergenic 35.0%
! TTCTGAAGATGTTGCTGATA+TGG - chr8_1:22695005-22695024 Msa1185490:three_prime_UTR 35.0%
CAAATGTATACAACCTCCAT+TGG - chr8_1:22695218-22695237 Msa1185490:CDS 35.0%
TCACTTATTCACTATTCGCT+AGG + chr8_1:22695269-22695288 None:intergenic 35.0%
!! CTAGTGGCATTTTAAAGGTA+AGG + chr8_1:22696034-22696053 None:intergenic 35.0%
TTACTGGTGTTTCAGATATC+AGG - chr8_1:22696129-22696148 Msa1185490:intron 35.0%
AAAGATTGGAATTGTTGGTC+TGG - chr8_1:22696155-22696174 Msa1185490:intron 35.0%
! AAGATTGGAATTGTTGGTCT+GGG - chr8_1:22696156-22696175 Msa1185490:intron 35.0%
GCATGATATCATACAACTCT+CGG - chr8_1:22696223-22696242 Msa1185490:intron 35.0%
! TAGTAAGGGTACGAAACTAA+TGG + chr8_1:22696258-22696277 None:intergenic 35.0%
CTAACACAGTGGAATAGTAA+GGG + chr8_1:22696272-22696291 None:intergenic 35.0%
TCTAACACAGTGGAATAGTA+AGG + chr8_1:22696273-22696292 None:intergenic 35.0%
ATCATAGTGAATGTTGGAAG+AGG - chr8_1:22696396-22696415 Msa1185490:intron 35.0%
CTTAACTTCAGAGTCACATA+TGG - chr8_1:22696566-22696585 Msa1185490:intron 35.0%
TATATAACTGGAGTGATCAG+AGG + chr8_1:22696642-22696661 None:intergenic 35.0%
!! TGTTTCTTCCCCGTTTTATT+TGG - chr8_1:22696673-22696692 Msa1185490:CDS 35.0%
TGAGAAAGCCAAATAAAACG+GGG + chr8_1:22696684-22696703 None:intergenic 35.0%
! AAATGTTCTAGTTGGATGGA+AGG - chr8_1:22696793-22696812 Msa1185490:CDS 35.0%
! TGGGAGATTCTTTGTTTCAT+CGG + chr8_1:22694683-22694702 None:intergenic 35.0%
!! CTCCCAAAAGTATTCTTTCA+CGG - chr8_1:22694697-22694716 Msa1185490:three_prime_UTR 35.0%
! GACCGTGAAAGAATACTTTT+GGG + chr8_1:22694702-22694721 None:intergenic 35.0%
ATGATATGGAAGTTGTGAGA+AGG + chr8_1:22694757-22694776 None:intergenic 35.0%
! GAGAAGATGGGTTTATGATA+TGG + chr8_1:22694771-22694790 None:intergenic 35.0%
! TTCTGAAGATGTTGCTGATA+TGG - chr8_1:22695005-22695024 Msa1185490:three_prime_UTR 35.0%
CAAATGTATACAACCTCCAT+TGG - chr8_1:22695218-22695237 Msa1185490:CDS 35.0%
TCACTTATTCACTATTCGCT+AGG + chr8_1:22695269-22695288 None:intergenic 35.0%
!! CTAGTGGCATTTTAAAGGTA+AGG + chr8_1:22696034-22696053 None:intergenic 35.0%
TTACTGGTGTTTCAGATATC+AGG - chr8_1:22696129-22696148 Msa1185490:intron 35.0%
AAAGATTGGAATTGTTGGTC+TGG - chr8_1:22696155-22696174 Msa1185490:intron 35.0%
! AAGATTGGAATTGTTGGTCT+GGG - chr8_1:22696156-22696175 Msa1185490:intron 35.0%
GCATGATATCATACAACTCT+CGG - chr8_1:22696223-22696242 Msa1185490:intron 35.0%
! TAGTAAGGGTACGAAACTAA+TGG + chr8_1:22696258-22696277 None:intergenic 35.0%
CTAACACAGTGGAATAGTAA+GGG + chr8_1:22696272-22696291 None:intergenic 35.0%
TCTAACACAGTGGAATAGTA+AGG + chr8_1:22696273-22696292 None:intergenic 35.0%
ATCATAGTGAATGTTGGAAG+AGG - chr8_1:22696396-22696415 Msa1185490:intron 35.0%
CTTAACTTCAGAGTCACATA+TGG - chr8_1:22696566-22696585 Msa1185490:intron 35.0%
TATATAACTGGAGTGATCAG+AGG + chr8_1:22696642-22696661 None:intergenic 35.0%
!! TGTTTCTTCCCCGTTTTATT+TGG - chr8_1:22696673-22696692 Msa1185490:CDS 35.0%
TGAGAAAGCCAAATAAAACG+GGG + chr8_1:22696684-22696703 None:intergenic 35.0%
! AAATGTTCTAGTTGGATGGA+AGG - chr8_1:22696793-22696812 Msa1185490:CDS 35.0%
! GGACCGTGAAAGAATACTTT+TGG + chr8_1:22694703-22694722 None:intergenic 40.0%
! AGGTTTGGGTTTGAGATATC+CGG + chr8_1:22694737-22694756 None:intergenic 40.0%
TGGAAGTTGTGAGAAGGTTT+GGG + chr8_1:22694751-22694770 None:intergenic 40.0%
ATGGAAGTTGTGAGAAGGTT+TGG + chr8_1:22694752-22694771 None:intergenic 40.0%
GATATGAATCGGTGAAGAGA+GGG + chr8_1:22694796-22694815 None:intergenic 40.0%
! GAGGTCAATGTGATTAGTTC+CGG + chr8_1:22694935-22694954 None:intergenic 40.0%
! CTTTGTTGGTTGATGTTGGT+AGG - chr8_1:22695034-22695053 Msa1185490:three_prime_UTR 40.0%
!!! GGATTTTCCACTTGGTTCTA+AGG - chr8_1:22695113-22695132 Msa1185490:CDS 40.0%
CTCCATTGGACAAAAAGTAG+CGG - chr8_1:22695232-22695251 Msa1185490:CDS 40.0%
!!! ATCCGCTACTTTTTGTCCAA+TGG + chr8_1:22695237-22695256 None:intergenic 40.0%
CATGTGGGTATGAGACAAAA+TGG + chr8_1:22695320-22695339 None:intergenic 40.0%
! ATTGTTGGTCTGGGAAGAAT+TGG - chr8_1:22696165-22696184 Msa1185490:intron 40.0%
TTGGCTTAGAAGTTGCAAAG+AGG - chr8_1:22696184-22696203 Msa1185490:intron 40.0%
GCAAAGAGGCTTGAAACATT+CGG - chr8_1:22696198-22696217 Msa1185490:intron 40.0%
ACAACAGAGAATGAGTACAC+TGG + chr8_1:22696310-22696329 None:intergenic 40.0%
GTGATTTAAACGACCAAACG+AGG - chr8_1:22696328-22696347 Msa1185490:intron 40.0%
TGTCAACACAGAAGTCATGT+TGG - chr8_1:22696356-22696375 Msa1185490:intron 40.0%
ACAGAAGTCATGTTGGCATT+AGG - chr8_1:22696363-22696382 Msa1185490:intron 40.0%
GTCATGTTGGCATTAGGAAA+AGG - chr8_1:22696369-22696388 Msa1185490:intron 40.0%
ATGTTGGCATTAGGAAAAGG+CGG - chr8_1:22696372-22696391 Msa1185490:intron 40.0%
AGGTGCTCTCATTGATGAAA+AGG - chr8_1:22696416-22696435 Msa1185490:intron 40.0%
! TGGATGGAAGGTATACATGA+TGG - chr8_1:22696805-22696824 Msa1185490:CDS 40.0%
! GGACCGTGAAAGAATACTTT+TGG + chr8_1:22694703-22694722 None:intergenic 40.0%
! AGGTTTGGGTTTGAGATATC+CGG + chr8_1:22694737-22694756 None:intergenic 40.0%
TGGAAGTTGTGAGAAGGTTT+GGG + chr8_1:22694751-22694770 None:intergenic 40.0%
ATGGAAGTTGTGAGAAGGTT+TGG + chr8_1:22694752-22694771 None:intergenic 40.0%
GATATGAATCGGTGAAGAGA+GGG + chr8_1:22694796-22694815 None:intergenic 40.0%
! GAGGTCAATGTGATTAGTTC+CGG + chr8_1:22694935-22694954 None:intergenic 40.0%
! CTTTGTTGGTTGATGTTGGT+AGG - chr8_1:22695034-22695053 Msa1185490:three_prime_UTR 40.0%
!!! GGATTTTCCACTTGGTTCTA+AGG - chr8_1:22695113-22695132 Msa1185490:CDS 40.0%
CTCCATTGGACAAAAAGTAG+CGG - chr8_1:22695232-22695251 Msa1185490:CDS 40.0%
!!! ATCCGCTACTTTTTGTCCAA+TGG + chr8_1:22695237-22695256 None:intergenic 40.0%
CATGTGGGTATGAGACAAAA+TGG + chr8_1:22695320-22695339 None:intergenic 40.0%
! ATTGTTGGTCTGGGAAGAAT+TGG - chr8_1:22696165-22696184 Msa1185490:intron 40.0%
TTGGCTTAGAAGTTGCAAAG+AGG - chr8_1:22696184-22696203 Msa1185490:intron 40.0%
GCAAAGAGGCTTGAAACATT+CGG - chr8_1:22696198-22696217 Msa1185490:intron 40.0%
ACAACAGAGAATGAGTACAC+TGG + chr8_1:22696310-22696329 None:intergenic 40.0%
GTGATTTAAACGACCAAACG+AGG - chr8_1:22696328-22696347 Msa1185490:intron 40.0%
TGTCAACACAGAAGTCATGT+TGG - chr8_1:22696356-22696375 Msa1185490:intron 40.0%
ACAGAAGTCATGTTGGCATT+AGG - chr8_1:22696363-22696382 Msa1185490:intron 40.0%
GTCATGTTGGCATTAGGAAA+AGG - chr8_1:22696369-22696388 Msa1185490:intron 40.0%
ATGTTGGCATTAGGAAAAGG+CGG - chr8_1:22696372-22696391 Msa1185490:intron 40.0%
AGGTGCTCTCATTGATGAAA+AGG - chr8_1:22696416-22696435 Msa1185490:intron 40.0%
! TGGATGGAAGGTATACATGA+TGG - chr8_1:22696805-22696824 Msa1185490:CDS 40.0%
! TTTGAGATATCCGGGGAGTT+CGG + chr8_1:22694728-22694747 None:intergenic 45.0%
! GTTTGGGTTTGAGATATCCG+GGG + chr8_1:22694735-22694754 None:intergenic 45.0%
! GGTTTGGGTTTGAGATATCC+GGG + chr8_1:22694736-22694755 None:intergenic 45.0%
GAAGAGAGGGAAGAGAAGAT+GGG + chr8_1:22694783-22694802 None:intergenic 45.0%
TGAAGAGAGGGAAGAGAAGA+TGG + chr8_1:22694784-22694803 None:intergenic 45.0%
GGATATGAATCGGTGAAGAG+AGG + chr8_1:22694797-22694816 None:intergenic 45.0%
!! GAGGGTTGGTGGATATGAAT+CGG + chr8_1:22694807-22694826 None:intergenic 45.0%
ATCTCCGCCATTCTCTGTAT+GGG - chr8_1:22694841-22694860 Msa1185490:three_prime_UTR 45.0%
GTAGAGACCCATACAGAGAA+TGG + chr8_1:22694851-22694870 None:intergenic 45.0%
AGGGAGAAGGTGGAGAATTT+CGG + chr8_1:22694884-22694903 None:intergenic 45.0%
TCATGATGAAACGGAGGCAA+GGG + chr8_1:22694903-22694922 None:intergenic 45.0%
CACTGGAGGTCATGATGAAA+CGG + chr8_1:22694912-22694931 None:intergenic 45.0%
! AATGTGATTAGTTCCGGCAC+TGG + chr8_1:22694929-22694948 None:intergenic 45.0%
ACATTGACCTCGACGTATGT+CGG - chr8_1:22694944-22694963 Msa1185490:three_prime_UTR 45.0%
AGATGTTGCTGATATGGCTG+TGG - chr8_1:22695011-22695030 Msa1185490:three_prime_UTR 45.0%
!! TGATATGGCTGTGGCTTTGT+TGG - chr8_1:22695020-22695039 Msa1185490:three_prime_UTR 45.0%
!! GTGGCTTTGTTGGTTGATGT+TGG - chr8_1:22695030-22695049 Msa1185490:three_prime_UTR 45.0%
TGGTAGGAAGATTTCAGCTG+CGG - chr8_1:22695050-22695069 Msa1185490:exon 45.0%
!! GGATCGGTTTTTGAGAAGAC+AGG - chr8_1:22695071-22695090 Msa1185490:CDS 45.0%
AGTGGAAAATCCCAAGATGC+AGG + chr8_1:22695105-22695124 None:intergenic 45.0%
! GCATCTTGGGATTTTCCACT+TGG - chr8_1:22695105-22695124 Msa1185490:CDS 45.0%
TTGCAGACCTTAGAACCAAG+TGG + chr8_1:22695123-22695142 None:intergenic 45.0%
!!! CGCTACTTTTTGTCCAATGG+AGG + chr8_1:22695234-22695253 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCT+CGG - chr8_1:22695958-22695977 Msa1185490:intron 45.0%
AGCTCTCGGAGACTTATTCT+CGG - chr8_1:22695972-22695991 Msa1185490:intron 45.0%
! TGTTGCAAGCTCTAACACAG+TGG + chr8_1:22696283-22696302 None:intergenic 45.0%
TGTTGACAATGTGCCTCGTT+TGG + chr8_1:22696344-22696363 None:intergenic 45.0%
GGCGGAATCATAGTGAATGT+TGG - chr8_1:22696390-22696409 Msa1185490:intron 45.0%
! GAAAATGAGATTGGAGGTGC+TGG - chr8_1:22696459-22696478 Msa1185490:intron 45.0%
GAAGTTAAGACAGCTGCATG+AGG + chr8_1:22696555-22696574 None:intergenic 45.0%
TATGGGTATCTGCCAACTTG+TGG - chr8_1:22696584-22696603 Msa1185490:CDS 45.0%
! TTTGAGATATCCGGGGAGTT+CGG + chr8_1:22694728-22694747 None:intergenic 45.0%
! GTTTGGGTTTGAGATATCCG+GGG + chr8_1:22694735-22694754 None:intergenic 45.0%
! GGTTTGGGTTTGAGATATCC+GGG + chr8_1:22694736-22694755 None:intergenic 45.0%
GAAGAGAGGGAAGAGAAGAT+GGG + chr8_1:22694783-22694802 None:intergenic 45.0%
TGAAGAGAGGGAAGAGAAGA+TGG + chr8_1:22694784-22694803 None:intergenic 45.0%
GGATATGAATCGGTGAAGAG+AGG + chr8_1:22694797-22694816 None:intergenic 45.0%
!! GAGGGTTGGTGGATATGAAT+CGG + chr8_1:22694807-22694826 None:intergenic 45.0%
ATCTCCGCCATTCTCTGTAT+GGG - chr8_1:22694841-22694860 Msa1185490:three_prime_UTR 45.0%
GTAGAGACCCATACAGAGAA+TGG + chr8_1:22694851-22694870 None:intergenic 45.0%
AGGGAGAAGGTGGAGAATTT+CGG + chr8_1:22694884-22694903 None:intergenic 45.0%
TCATGATGAAACGGAGGCAA+GGG + chr8_1:22694903-22694922 None:intergenic 45.0%
CACTGGAGGTCATGATGAAA+CGG + chr8_1:22694912-22694931 None:intergenic 45.0%
! AATGTGATTAGTTCCGGCAC+TGG + chr8_1:22694929-22694948 None:intergenic 45.0%
ACATTGACCTCGACGTATGT+CGG - chr8_1:22694944-22694963 Msa1185490:three_prime_UTR 45.0%
AGATGTTGCTGATATGGCTG+TGG - chr8_1:22695011-22695030 Msa1185490:three_prime_UTR 45.0%
!! TGATATGGCTGTGGCTTTGT+TGG - chr8_1:22695020-22695039 Msa1185490:three_prime_UTR 45.0%
!! GTGGCTTTGTTGGTTGATGT+TGG - chr8_1:22695030-22695049 Msa1185490:three_prime_UTR 45.0%
TGGTAGGAAGATTTCAGCTG+CGG - chr8_1:22695050-22695069 Msa1185490:exon 45.0%
!! GGATCGGTTTTTGAGAAGAC+AGG - chr8_1:22695071-22695090 Msa1185490:CDS 45.0%
AGTGGAAAATCCCAAGATGC+AGG + chr8_1:22695105-22695124 None:intergenic 45.0%
! GCATCTTGGGATTTTCCACT+TGG - chr8_1:22695105-22695124 Msa1185490:CDS 45.0%
TTGCAGACCTTAGAACCAAG+TGG + chr8_1:22695123-22695142 None:intergenic 45.0%
!!! CGCTACTTTTTGTCCAATGG+AGG + chr8_1:22695234-22695253 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCT+CGG - chr8_1:22695958-22695977 Msa1185490:intron 45.0%
AGCTCTCGGAGACTTATTCT+CGG - chr8_1:22695972-22695991 Msa1185490:intron 45.0%
! TGTTGCAAGCTCTAACACAG+TGG + chr8_1:22696283-22696302 None:intergenic 45.0%
TGTTGACAATGTGCCTCGTT+TGG + chr8_1:22696344-22696363 None:intergenic 45.0%
GGCGGAATCATAGTGAATGT+TGG - chr8_1:22696390-22696409 Msa1185490:intron 45.0%
! GAAAATGAGATTGGAGGTGC+TGG - chr8_1:22696459-22696478 Msa1185490:intron 45.0%
GAAGTTAAGACAGCTGCATG+AGG + chr8_1:22696555-22696574 None:intergenic 45.0%
TATGGGTATCTGCCAACTTG+TGG - chr8_1:22696584-22696603 Msa1185490:CDS 45.0%
TTGAGATATCCGGGGAGTTC+GGG + chr8_1:22694727-22694746 None:intergenic 50.0%
!! AGATGGAGGAAGCGTTGTGA+GGG + chr8_1:22694825-22694844 None:intergenic 50.0%
! CATACAGAGAATGGCGGAGA+TGG + chr8_1:22694842-22694861 None:intergenic 50.0%
CATCTCCGCCATTCTCTGTA+TGG - chr8_1:22694840-22694859 Msa1185490:three_prime_UTR 50.0%
GAGACCCATACAGAGAATGG+CGG + chr8_1:22694848-22694867 None:intergenic 50.0%
! GGAGAATTTCGGCGTTGAGA+GGG + chr8_1:22694873-22694892 None:intergenic 50.0%
! TGGAGAATTTCGGCGTTGAG+AGG + chr8_1:22694874-22694893 None:intergenic 50.0%
GTCATGATGAAACGGAGGCA+AGG + chr8_1:22694904-22694923 None:intergenic 50.0%
TGGAGGTCATGATGAAACGG+AGG + chr8_1:22694909-22694928 None:intergenic 50.0%
TTCATCATGACCTCCAGTGC+CGG - chr8_1:22694913-22694932 Msa1185490:three_prime_UTR 50.0%
GGAAGATTTCAGCTGCGGAT+CGG - chr8_1:22695055-22695074 Msa1185490:CDS 50.0%
GCTCTCGGAGACTTATTCTC+GGG - chr8_1:22695973-22695992 Msa1185490:intron 50.0%
CTCTCGGAGACTTATTCTCG+GGG - chr8_1:22695974-22695993 Msa1185490:intron 50.0%
!! TGAGATTGGAGGTGCTGGTT+TGG - chr8_1:22696464-22696483 Msa1185490:intron 50.0%
AGACAGCTGCATGAGGTGAA+AGG + chr8_1:22696548-22696567 None:intergenic 50.0%
TTGAGATATCCGGGGAGTTC+GGG + chr8_1:22694727-22694746 None:intergenic 50.0%
!! AGATGGAGGAAGCGTTGTGA+GGG + chr8_1:22694825-22694844 None:intergenic 50.0%
! CATACAGAGAATGGCGGAGA+TGG + chr8_1:22694842-22694861 None:intergenic 50.0%
CATCTCCGCCATTCTCTGTA+TGG - chr8_1:22694840-22694859 Msa1185490:three_prime_UTR 50.0%
GAGACCCATACAGAGAATGG+CGG + chr8_1:22694848-22694867 None:intergenic 50.0%
! GGAGAATTTCGGCGTTGAGA+GGG + chr8_1:22694873-22694892 None:intergenic 50.0%
! TGGAGAATTTCGGCGTTGAG+AGG + chr8_1:22694874-22694893 None:intergenic 50.0%
GTCATGATGAAACGGAGGCA+AGG + chr8_1:22694904-22694923 None:intergenic 50.0%
TGGAGGTCATGATGAAACGG+AGG + chr8_1:22694909-22694928 None:intergenic 50.0%
TTCATCATGACCTCCAGTGC+CGG - chr8_1:22694913-22694932 Msa1185490:three_prime_UTR 50.0%
GGAAGATTTCAGCTGCGGAT+CGG - chr8_1:22695055-22695074 Msa1185490:CDS 50.0%
GCTCTCGGAGACTTATTCTC+GGG - chr8_1:22695973-22695992 Msa1185490:intron 50.0%
CTCTCGGAGACTTATTCTCG+GGG - chr8_1:22695974-22695993 Msa1185490:intron 50.0%
!! TGAGATTGGAGGTGCTGGTT+TGG - chr8_1:22696464-22696483 Msa1185490:intron 50.0%
AGACAGCTGCATGAGGTGAA+AGG + chr8_1:22696548-22696567 None:intergenic 50.0%
!! GAGATGGAGGAAGCGTTGTG+AGG + chr8_1:22694826-22694845 None:intergenic 55.0%
! ACAGAGAATGGCGGAGATGG+AGG + chr8_1:22694839-22694858 None:intergenic 55.0%
TGAAACGGAGGCAAGGGAGA+AGG + chr8_1:22694897-22694916 None:intergenic 55.0%
! GTGATTAGTTCCGGCACTGG+AGG + chr8_1:22694926-22694945 None:intergenic 55.0%
GGAATTCAGGTCGCTAACGC+TGG - chr8_1:22694973-22694992 Msa1185490:three_prime_UTR 55.0%
AGGTTCAGTCGCCTGCATCT+TGG - chr8_1:22695091-22695110 Msa1185490:CDS 55.0%
GGTTCAGTCGCCTGCATCTT+GGG - chr8_1:22695092-22695111 Msa1185490:CDS 55.0%
CTCCGAGAGCTTAGCTCAGT+TGG + chr8_1:22695963-22695982 None:intergenic 55.0%
!! GAGATGGAGGAAGCGTTGTG+AGG + chr8_1:22694826-22694845 None:intergenic 55.0%
! ACAGAGAATGGCGGAGATGG+AGG + chr8_1:22694839-22694858 None:intergenic 55.0%
TGAAACGGAGGCAAGGGAGA+AGG + chr8_1:22694897-22694916 None:intergenic 55.0%
! GTGATTAGTTCCGGCACTGG+AGG + chr8_1:22694926-22694945 None:intergenic 55.0%
GGAATTCAGGTCGCTAACGC+TGG - chr8_1:22694973-22694992 Msa1185490:three_prime_UTR 55.0%
AGGTTCAGTCGCCTGCATCT+TGG - chr8_1:22695091-22695110 Msa1185490:CDS 55.0%
GGTTCAGTCGCCTGCATCTT+GGG - chr8_1:22695092-22695111 Msa1185490:CDS 55.0%
CTCCGAGAGCTTAGCTCAGT+TGG + chr8_1:22695963-22695982 None:intergenic 55.0%
AGATATCCGGGGAGTTCGGG+TGG + chr8_1:22694724-22694743 None:intergenic 60.0%
!! GGAAGCGTTGTGAGGGTTGG+TGG + chr8_1:22694818-22694837 None:intergenic 60.0%
!! GGAGGAAGCGTTGTGAGGGT+TGG + chr8_1:22694821-22694840 None:intergenic 60.0%
AACGGAGGCAAGGGAGAAGG+TGG + chr8_1:22694894-22694913 None:intergenic 60.0%
ACCTCGACGTATGTCGGCGA+CGG - chr8_1:22694950-22694969 Msa1185490:three_prime_UTR 60.0%
ATGTCGGCGACGGGGAATTC+AGG - chr8_1:22694960-22694979 Msa1185490:three_prime_UTR 60.0%
AGATATCCGGGGAGTTCGGG+TGG + chr8_1:22694724-22694743 None:intergenic 60.0%
!! GGAAGCGTTGTGAGGGTTGG+TGG + chr8_1:22694818-22694837 None:intergenic 60.0%
!! GGAGGAAGCGTTGTGAGGGT+TGG + chr8_1:22694821-22694840 None:intergenic 60.0%
AACGGAGGCAAGGGAGAAGG+TGG + chr8_1:22694894-22694913 None:intergenic 60.0%
ACCTCGACGTATGTCGGCGA+CGG - chr8_1:22694950-22694969 Msa1185490:three_prime_UTR 60.0%
ATGTCGGCGACGGGGAATTC+AGG - chr8_1:22694960-22694979 Msa1185490:three_prime_UTR 60.0%
CCTCGACGTATGTCGGCGAC+GGG - chr8_1:22694951-22694970 Msa1185490:three_prime_UTR 65.0%
CTCGACGTATGTCGGCGACG+GGG - chr8_1:22694952-22694971 Msa1185490:three_prime_UTR 65.0%
CCTCGACGTATGTCGGCGAC+GGG - chr8_1:22694951-22694970 Msa1185490:three_prime_UTR 65.0%
CTCGACGTATGTCGGCGACG+GGG - chr8_1:22694952-22694971 Msa1185490:three_prime_UTR 65.0%
CACGGTCCACCCGAACTCCC+CGG - chr8_1:22694715-22694734 Msa1185490:three_prime_UTR 70.0%
CCCGTCGCCGACATACGTCG+AGG + chr8_1:22694954-22694973 None:intergenic 70.0%
CACGGTCCACCCGAACTCCC+CGG - chr8_1:22694715-22694734 Msa1185490:three_prime_UTR 70.0%
CCCGTCGCCGACATACGTCG+AGG + chr8_1:22694954-22694973 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 22694679 22697038 22694679 ID=Msa1185490;Name=Msa1185490
chr8_1 mRNA 22694679 22697038 22694679 ID=Msa1185490-mRNA-1;Parent=Msa1185490;Name=Msa1185490-mRNA-1;_AED=0.02;_eAED=0.02;_QI=180|1|1|1|1|1|2|376|264
chr8_1 exon 22694679 22695573 22694679 ID=Msa1185490-mRNA-1:exon:8362;Parent=Msa1185490-mRNA-1
chr8_1 exon 22696583 22697038 22696583 ID=Msa1185490-mRNA-1:exon:8361;Parent=Msa1185490-mRNA-1
chr8_1 five_prime_UTR 22696859 22697038 22696859 ID=Msa1185490-mRNA-1:five_prime_utr;Parent=Msa1185490-mRNA-1
chr8_1 CDS 22696583 22696858 22696583 ID=Msa1185490-mRNA-1:cds;Parent=Msa1185490-mRNA-1
chr8_1 CDS 22695055 22695573 22695055 ID=Msa1185490-mRNA-1:cds;Parent=Msa1185490-mRNA-1
chr8_1 three_prime_UTR 22694679 22695054 22694679 ID=Msa1185490-mRNA-1:three_prime_utr;Parent=Msa1185490-mRNA-1
Gene Sequence

>Msa1185490

ATGGGTCTCTACCCTCTCAACGCCGAAATTCTCCACCTTCTCCCTTGCCTCCGTTTCATCATGACCTCCAGTGCCGGAACTAATCACATTGACCTCGACGTATGTCGGCGACGGGGAATTCAGGTCGCTAACGCTGGAAATCTTTTTTCTGAAGATGTTGCTGATATGGCTGTGGCTTTGTTGGTTGATGTTGGTAGGAAGATTTCAGCTGCGGATCGGTTTTTGAGAAGACAGGTTCAGTCGCCTGCATCTTGGGATTTTCCACTTGGTTCTAAGATATCAGGAAAAAAGATTGGAATTGTTGGTCTGGGAAGAATTGGCTTAGAAGTTGCAAAGAGGCTTGAAACATTCGGTTGCATGATATCATACAACTCTCGGAACAAAAAACCATTAGTTTCGTACCCTTACTATTCCACTGTGTTAGAGCTTGCAACAAACACCAGTGTACTCATTCTCTGTTGTGATTTAAACGACCAAACGAGGCACATTGTCAACACAGAAGTCATGTTGGCATTAGGAAAAGGCGGAATCATAGTGAATGTTGGAAGAGGTGCTCTCATTGATGAAAAGGAACTGTTGAAGTGTTTGATTGAAAATGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTAATGTTCCTAAAGAGTTCTTTTCATTGGATAATGTTGTCCTTTCACCTCATGCAGCTGTCTTAACTTCAGAGTCACATATGGGTATCTGCCAACTTGTGGAACAAAATTTGATAGCATTCTTTTCAAATAAACCTCTGATCACTCCAGTTATATAG
Protein sequence

>Msa1185490

MGLYPLNAEILHLLPCLRFIMTSSAGTNHIDLDVCRRRGIQVANAGNLFSEDVADMAVALLVDVGRKISAADRFLRRQVQSPASWDFPLGSKISGKKIGIVGLGRIGLEVAKRLETFGCMISYNSRNKKPLVSYPYYSTVLELATNTSVLILCCDLNDQTRHIVNTEVMLALGKGGIIVNVGRGALIDEKELLKCLIENEIGGAGLDVFENEPNVPKEFFSLDNVVLSPHAAVLTSESHMGICQLVEQNLIAFFSNKPLITPVI*