AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0893390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0893390 MtrunA17_Chr6g0465111 93.075 361 8 1 1 344 1 361 0.0 687
Msa0893390 MtrunA17_Chr6g0465121 89.751 361 15 3 1 344 14 369 0.0 655
Msa0893390 MtrunA17_Chr1g0200981 68.169 355 96 1 7 344 6 360 0.0 507
Msa0893390 MtrunA17_Chr6g0464971 60.894 358 123 1 3 343 5 362 8.79e-166 466
Msa0893390 MtrunA17_Chr6g0464961 61.453 358 121 1 3 343 27 384 7.94e-158 449
Msa0893390 MtrunA17_Chr6g0477771 52.617 363 150 3 1 342 1 362 2.12e-138 397
Msa0893390 MtrunA17_Chr3g0110001 52.617 363 151 2 1 342 1 363 5.13e-134 386
Msa0893390 MtrunA17_Chr6g0464931 66.071 112 36 1 3 112 5 116 7.13e-40 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0893390 AT4G09670.1 61.281 359 122 1 1 342 1 359 2.79e-168 473
Msa0893390 AT1G34200.1 55.307 358 131 3 1 340 1 347 1.09e-139 400
Msa0893390 AT1G66130.1 42.935 368 180 8 1 342 1 364 8.77e-93 281

Find 102 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAATTGCGTCACAATTAT+TGG 0.156822 6_1:+77421450 None:intergenic
CCTTTCATCACCTCCGTTCT+AGG 0.180039 6_1:+77424996 None:intergenic
TTCATAGGAGCCGTAGATTT+TGG 0.245108 6_1:+77425229 None:intergenic
GGAGTGTGGGGTGCAGTTTA+TGG 0.281913 6_1:-77425042 Msa0893390:CDS
ACGTAAACAGCGTCAACATT+AGG 0.295512 6_1:+77425191 None:intergenic
CTTGTGGCGCTTCTTTATAT+TGG 0.296195 6_1:-77422057 Msa0893390:CDS
CAGCAGTTATATCCATTGTT+AGG 0.316283 6_1:+77421990 None:intergenic
TTGATGATCTTGTCACTAGA+TGG 0.323932 6_1:-77421877 Msa0893390:CDS
CCAATCCGTTTCGGCATTCT+CGG 0.336150 6_1:-77425383 Msa0893390:CDS
TCTACCTCAGGAGGCTCTTA+TGG 0.340576 6_1:-77421819 Msa0893390:CDS
CTCGACGCTCTTGGCTCTCT+TGG 0.345356 6_1:-77422193 Msa0893390:CDS
TTGTGGCGCTTCTTTATATT+GGG 0.348945 6_1:-77422056 Msa0893390:CDS
GAGCCAAGAGCGTCGAGATC+TGG 0.364195 6_1:+77422199 None:intergenic
TAGGAAAACACAACTGATAC+TGG 0.367518 6_1:-77421720 Msa0893390:CDS
TGCCACCAAACGAGAAAATT+CGG 0.372855 6_1:+77421793 None:intergenic
ACCACCCTCTTTCAACTTGA+AGG 0.373722 6_1:+77421515 None:intergenic
GGCGGTGGCTGCGGCGAAGA+AGG 0.377347 6_1:-77425138 Msa0893390:CDS
ATTCACACCTGCTTTACATT+TGG 0.392125 6_1:-77422262 Msa0893390:CDS
ATCGTCGGCCATTTCTTCTC+TGG 0.392299 6_1:+77421746 None:intergenic
TGCGTCACAATTATTGGAAC+TGG 0.393438 6_1:+77421456 None:intergenic
ATGTCGTTCTCGAGAAAATC+AGG 0.401057 6_1:+77422232 None:intergenic
ATAACTGCTGTTGGGACAAA+AGG 0.403721 6_1:-77421977 Msa0893390:CDS
CGTAAACAGCGTCAACATTA+GGG 0.406747 6_1:+77425192 None:intergenic
GTGAAGGCTTCGATTGATAA+GGG 0.424600 6_1:-77421692 Msa0893390:CDS
GGCGGTGGGAGGGAAGTTGT+TGG 0.426867 6_1:+77425250 None:intergenic
TGTCTTCACCCTGCTGAACT+TGG 0.427268 6_1:-77421627 Msa0893390:three_prime_UTR
TGATGATCTTGTCACTAGAT+GGG 0.427776 6_1:-77421876 Msa0893390:CDS
ACGCGAAACCAGAGAAGAAA+TGG 0.431579 6_1:-77421754 Msa0893390:CDS
AGTGAAGGCTTCGATTGATA+AGG 0.437477 6_1:-77421693 Msa0893390:CDS
AAGCCAGATCTCGACGCTCT+TGG 0.439470 6_1:-77422202 Msa0893390:CDS
TGTGGGGTGCAGTTTATGGA+TGG 0.445150 6_1:-77425038 Msa0893390:CDS
GTGTGCGAAGGTGGTTGCTT+TGG 0.448592 6_1:+77425274 None:intergenic
TGAAGGTGTGTGAGGAGTGT+GGG 0.450982 6_1:-77425055 Msa0893390:CDS
GCGGTGGCTGCGGCGAAGAA+GGG 0.452911 6_1:-77425137 Msa0893390:CDS
AGAAATGGCCGACGATTAGT+AGG 0.458147 6_1:-77421739 Msa0893390:CDS
AACAAAGATCCAAGTTCAGC+AGG 0.459556 6_1:+77421618 None:intergenic
TGTGAAGTGGGCGGTGGCTG+CGG 0.469619 6_1:-77425147 Msa0893390:CDS
GAATGGCGCGTGAGAGTTTG+CGG 0.478095 6_1:+77425345 None:intergenic
GCGGCTGCCGACGGCGGAGA+TGG 0.479896 6_1:+77425304 None:intergenic
GTGAAGGTGTGTGAGGAGTG+TGG 0.484508 6_1:-77425056 Msa0893390:CDS
GCTCTCTTGGCGACGAAGGA+TGG 0.484511 6_1:-77422180 Msa0893390:CDS
TGAGAGTTTGCGGGCTATGT+CGG 0.497589 6_1:+77425355 None:intergenic
ATCAGCACCAAATGTAAAGC+AGG 0.503357 6_1:+77422255 None:intergenic
CCGAGAATGCCGAAACGGAT+TGG 0.507642 6_1:+77425383 None:intergenic
GATGATCTTGTCACTAGATG+GGG 0.507725 6_1:-77421875 Msa0893390:CDS
GGAGAGAGTGCGGCTGCCGA+CGG 0.508254 6_1:+77425295 None:intergenic
ACAATGGATATAACTGCTGT+TGG 0.509647 6_1:-77421986 Msa0893390:CDS
GACGGCGGAGATGGTGGCGG+TGG 0.510369 6_1:+77425313 None:intergenic
CGGTGGCTGCGGCGAAGAAG+GGG 0.510716 6_1:-77425136 Msa0893390:CDS
AATGCCGAAACGGATTGGTT+CGG 0.512845 6_1:+77425388 None:intergenic
GTTGTTGGAGTGTGCGAAGG+TGG 0.515969 6_1:+77425265 None:intergenic
CAATGGATATAACTGCTGTT+GGG 0.519696 6_1:-77421985 Msa0893390:CDS
ACAAGACCAAAGGATTCAAA+AGG 0.521263 6_1:-77421391 None:intergenic
CAAACCGAACCAATCCGTTT+CGG 0.521658 6_1:-77425392 Msa0893390:CDS
CTTGGCTCTCTTGGCGACGA+AGG 0.521752 6_1:-77422184 Msa0893390:CDS
TTTCATTCCTGAATCTGTAC+AGG 0.527130 6_1:+77421662 None:intergenic
CACAGCCGAGAATGCCGAAA+CGG 0.527316 6_1:+77425378 None:intergenic
GCTTCTTTATATTGGGAAGA+TGG 0.528569 6_1:-77422049 Msa0893390:CDS
GCCGACGGCGGAGATGGTGG+CGG 0.536667 6_1:+77425310 None:intergenic
ACTCCAGCTTTATTAAGCAC+TGG 0.541763 6_1:+77422088 None:intergenic
GCTGCCGACGGCGGAGATGG+TGG 0.542916 6_1:+77425307 None:intergenic
GCCGGTGGCGGTTAGTGTGA+AGG 0.543065 6_1:-77425093 Msa0893390:CDS
TCCTTCACACTAACCGCCAC+CGG 0.555864 6_1:+77425092 None:intergenic
ACATGCAACGTCGTCGGTAA+CGG 0.555872 6_1:+77425167 None:intergenic
AATGGCGCGTGAGAGTTTGC+GGG 0.557508 6_1:+77425346 None:intergenic
TTTCTTATCTAACCTAACAA+TGG 0.559985 6_1:-77422002 Msa0893390:CDS
ACTGATACTGGATGCAGTGA+AGG 0.561275 6_1:-77421708 Msa0893390:CDS
TTTGTTGGAGAAGCCGGTGG+CGG 0.562338 6_1:-77425105 Msa0893390:CDS
TATGTCCTTCAAGTTGAAAG+AGG 0.562855 6_1:-77421520 Msa0893390:three_prime_UTR
AGATGGTGGCGGTGGAAGAG+AGG 0.563398 6_1:+77425321 None:intergenic
CGACGACGTTGCATGTGAAG+TGG 0.565201 6_1:-77425160 Msa0893390:CDS
GTGGGGTGCAGTTTATGGAT+GGG 0.567208 6_1:-77425037 Msa0893390:CDS
ACCGCCACCATCTCCGCCGT+CGG 0.570452 6_1:-77425311 Msa0893390:CDS
GTTGCATGTGAAGTGGGCGG+TGG 0.573707 6_1:-77425153 Msa0893390:CDS
CCTCCCACCGCCAAAATCTA+CGG 0.577677 6_1:-77425239 Msa0893390:CDS
GAGCCAGTGCTTAATAAAGC+TGG 0.580556 6_1:-77422091 Msa0893390:CDS
AATAGAAAACGATCTACCTC+AGG 0.582701 6_1:-77421831 Msa0893390:CDS
GGCGGTGGAAGAGAGGAGAA+TGG 0.589254 6_1:+77425328 None:intergenic
ATTGTGTTAGAGCAATTCTG+TGG 0.595898 6_1:-77422156 Msa0893390:CDS
GAAGTTGTTGGAGTGTGCGA+AGG 0.598345 6_1:+77425262 None:intergenic
GTCGTCAAGAACTTCTTCAT+AGG 0.601925 6_1:+77425214 None:intergenic
AAAATCAATAACAAGACCAA+AGG 0.609033 6_1:-77421401 Msa0893390:three_prime_UTR
GAAGGTGTGTGAGGAGTGTG+GGG 0.614462 6_1:-77425054 Msa0893390:CDS
AGAAAACGATCTACCTCAGG+AGG 0.623275 6_1:-77421828 Msa0893390:CDS
GACGACGTTGCATGTGAAGT+GGG 0.624741 6_1:-77425159 Msa0893390:CDS
CACTTCACATGCAACGTCGT+CGG 0.627560 6_1:+77425161 None:intergenic
GGAGTTTGATGAGATTGTGA+AGG 0.628031 6_1:-77425072 Msa0893390:CDS
TCCTTCAAGTTGAAAGAGGG+TGG 0.628099 6_1:-77421516 Msa0893390:three_prime_UTR
GAGAGTGCGGCTGCCGACGG+CGG 0.628307 6_1:+77425298 None:intergenic
GTGGATGCATCATCCTAGAA+CGG 0.629139 6_1:-77425009 Msa0893390:CDS
GCTGGAGTGATTCTATCTTG+TGG 0.635997 6_1:-77422073 Msa0893390:CDS
TTGTGTTAGAGCAATTCTGT+GGG 0.638125 6_1:-77422155 Msa0893390:CDS
ATGTCCTTCAAGTTGAAAGA+GGG 0.646489 6_1:-77421519 Msa0893390:three_prime_UTR
ACAAAGATCCAAGTTCAGCA+GGG 0.651296 6_1:+77421619 None:intergenic
AGTTTATGGATGGGACTATG+TGG 0.660551 6_1:-77425028 Msa0893390:CDS
TGTGACGCAATTTGTCGCTG+TGG 0.662093 6_1:-77421442 Msa0893390:three_prime_UTR
TGAGATTGTGAAGGTGTGTG+AGG 0.665830 6_1:-77425063 Msa0893390:CDS
GATGCATCATCCTAGAACGG+AGG 0.667515 6_1:-77425006 Msa0893390:intron
TTGCGACGCACTAATAACAT+CGG 0.673386 6_1:+77421595 None:intergenic
TGGTTGCTTTGGAGAGAGTG+CGG 0.689611 6_1:+77425285 None:intergenic
GACGTTGCATGTGAAGTGGG+CGG 0.734438 6_1:-77425156 Msa0893390:CDS
GTTACCATAAGAGCCTCCTG+AGG 0.738420 6_1:+77421815 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGATTATTTTTAGAGATTT+AGG - chr6_1:77422442-77422461 Msa0893390:intron 15.0%
!!! AGATTATTTTTAGAGATTTA+GGG - chr6_1:77422443-77422462 Msa0893390:intron 15.0%
!!! GAAACATGATTTTAATATTA+TGG - chr6_1:77422787-77422806 Msa0893390:intron 15.0%
!!! TAATATTATGGATTGATTTT+TGG - chr6_1:77422799-77422818 Msa0893390:intron 15.0%
!! TATAATTTCAATAGCTAAAA+TGG + chr6_1:77423368-77423387 None:intergenic 15.0%
!!! AAAACTTAATGTTTAAGATT+GGG + chr6_1:77424420-77424439 None:intergenic 15.0%
!! ATAATGTTGATGTATAAACT+AGG - chr6_1:77421882-77421901 Msa0893390:CDS 20.0%
!! TGAATTATGTGAATTATTAG+CGG - chr6_1:77421995-77422014 Msa0893390:CDS 20.0%
!! CCTCTTTATTAAATTATCAT+CGG + chr6_1:77422099-77422118 None:intergenic 20.0%
!!! TAAGATATTGATGATGATTT+AGG - chr6_1:77422359-77422378 Msa0893390:intron 20.0%
!! TTAAGAAAATAGAAGTGATT+TGG - chr6_1:77422680-77422699 Msa0893390:intron 20.0%
!! TAAGAAAATAGAAGTGATTT+GGG - chr6_1:77422681-77422700 Msa0893390:intron 20.0%
!! TGTATAAATAATGAGAATGT+AGG - chr6_1:77422926-77422945 Msa0893390:intron 20.0%
!! TTGAAATTATAAGAGTTAGA+CGG - chr6_1:77423377-77423396 Msa0893390:intron 20.0%
!!! TTTTCATTTCGTAAATTTGA+AGG - chr6_1:77423862-77423881 Msa0893390:intron 20.0%
!!! TTTTGGTTATCTAAATTCTA+TGG + chr6_1:77423902-77423921 None:intergenic 20.0%
!!! GAAAACTTAATGTTTAAGAT+TGG + chr6_1:77424421-77424440 None:intergenic 20.0%
! CCGATGATAATTTAATAAAG+AGG - chr6_1:77422096-77422115 Msa0893390:CDS 25.0%
! TTATTGGATGAAATTCATGT+GGG + chr6_1:77422201-77422220 None:intergenic 25.0%
! TTTATTGGATGAAATTCATG+TGG + chr6_1:77422202-77422221 None:intergenic 25.0%
! TAAGAAAATAGAAGCGATTT+AGG - chr6_1:77422263-77422282 Msa0893390:CDS 25.0%
! AAGAAAATAGAAGCGATTTA+GGG - chr6_1:77422264-77422283 Msa0893390:CDS 25.0%
! AAGAAAATAGAAGTGATTTG+GGG - chr6_1:77422682-77422701 Msa0893390:intron 25.0%
! ATTGATGTATGAAGCTAAAA+GGG - chr6_1:77422736-77422755 Msa0893390:intron 25.0%
! GAAAGATGATACTTGATATT+TGG - chr6_1:77422950-77422969 Msa0893390:intron 25.0%
! AGGTACAAAAAACAATTCAA+CGG + chr6_1:77423048-77423067 None:intergenic 25.0%
! ATTATCTATACTCATCCAAT+GGG - chr6_1:77423266-77423285 Msa0893390:intron 25.0%
! TCAGTAAATTCTGATGAATT+TGG - chr6_1:77423685-77423704 Msa0893390:intron 25.0%
! CAGTAAATTCTGATGAATTT+GGG - chr6_1:77423686-77423705 Msa0893390:intron 25.0%
!! TTTTATCCAGTTAGATAGAA+AGG - chr6_1:77423800-77423819 Msa0893390:intron 25.0%
! TTTATCCAGTTAGATAGAAA+GGG - chr6_1:77423801-77423820 Msa0893390:intron 25.0%
! AAAGGGACTAAATTGATTAT+CGG - chr6_1:77423818-77423837 Msa0893390:intron 25.0%
!! TTAAGAGTAACTGAACATTT+TGG + chr6_1:77423919-77423938 None:intergenic 25.0%
! AGAAGAGTTAAAAAAAATCC+TGG - chr6_1:77424022-77424041 Msa0893390:intron 25.0%
!! TGTCACGTAATTTTTCATTT+TGG - chr6_1:77424049-77424068 Msa0893390:intron 25.0%
!!! TTTCTGTTGGTTCTTAATTT+TGG + chr6_1:77424332-77424351 None:intergenic 25.0%
! TTTCTTATCTAACCTAACAA+TGG - chr6_1:77424790-77424809 Msa0893390:intron 25.0%
!! ATGCTTTCTTTTCTTCATAA+GGG + chr6_1:77424868-77424887 None:intergenic 25.0%
! AAAATCAATAACAAGACCAA+AGG - chr6_1:77425391-77425410 Msa0893390:CDS 25.0%
TTCAGTGTAATTATCTGTGT+GGG + chr6_1:77421979-77421998 None:intergenic 30.0%
ATTCAGTGTAATTATCTGTG+TGG + chr6_1:77421980-77421999 None:intergenic 30.0%
TCCAATAAAATAGTGAGTGT+TGG - chr6_1:77422213-77422232 Msa0893390:CDS 30.0%
! TCCAACACTCACTATTTTAT+TGG + chr6_1:77422217-77422236 None:intergenic 30.0%
! TCGCTTCTATTTTCTTAAAG+AGG + chr6_1:77422260-77422279 None:intergenic 30.0%
! ATGATTTAGGATAGTAGAAG+TGG - chr6_1:77422372-77422391 Msa0893390:intron 30.0%
! GATTTAGGGTTCATTTGTTA+TGG - chr6_1:77422457-77422476 Msa0893390:intron 30.0%
CATTGATGTATGAAGCTAAA+AGG - chr6_1:77422735-77422754 Msa0893390:intron 30.0%
TATGAAGCTAAAAGGGATTT+AGG - chr6_1:77422743-77422762 Msa0893390:intron 30.0%
!!! GATTTAGGCTCTGTTTTTTA+CGG - chr6_1:77422758-77422777 Msa0893390:intron 30.0%
!! GAGATTAGAGCACTTTTATA+TGG - chr6_1:77422821-77422840 Msa0893390:intron 30.0%
GTTTGATACTCAAGAAACAT+AGG - chr6_1:77422859-77422878 Msa0893390:intron 30.0%
!!! GAATTGTTTTTTGTACCTAG+CGG - chr6_1:77423050-77423069 Msa0893390:intron 30.0%
ACGAGTACATTTGATATGTT+GGG + chr6_1:77423172-77423191 None:intergenic 30.0%
TACGAGTACATTTGATATGT+TGG + chr6_1:77423173-77423192 None:intergenic 30.0%
CATTATCTATACTCATCCAA+TGG - chr6_1:77423265-77423284 Msa0893390:intron 30.0%
TAATACGACCTTCATATACT+TGG + chr6_1:77423412-77423431 None:intergenic 30.0%
TACTGAATTAGCTGAAGAAA+GGG + chr6_1:77423671-77423690 None:intergenic 30.0%
TTACTGAATTAGCTGAAGAA+AGG + chr6_1:77423672-77423691 None:intergenic 30.0%
! ATTATCGGTTATCAACTTCA+TGG - chr6_1:77423833-77423852 Msa0893390:intron 30.0%
TTGGCTTAGTGTATAGATAA+TGG - chr6_1:77423975-77423994 Msa0893390:intron 30.0%
AAAATTACGTGACATTAACC+AGG + chr6_1:77424043-77424062 None:intergenic 30.0%
GTTCAATAATGAGTCTCTAA+GGG + chr6_1:77424249-77424268 None:intergenic 30.0%
TGTTCAATAATGAGTCTCTA+AGG + chr6_1:77424250-77424269 None:intergenic 30.0%
TCAATACTATAGCTTTCTGT+TGG + chr6_1:77424345-77424364 None:intergenic 30.0%
TAACACAGCATAATAACTGT+TGG + chr6_1:77424446-77424465 None:intergenic 30.0%
CACTGATATATGGTTTGATT+TGG - chr6_1:77424497-77424516 Msa0893390:intron 30.0%
! GATGCTTTCTTTTCTTCATA+AGG + chr6_1:77424869-77424888 None:intergenic 30.0%
! TTTTCTATTACGTGCTTACT+CGG + chr6_1:77424950-77424969 None:intergenic 30.0%
ACAAATTGCGTCACAATTAT+TGG + chr6_1:77425345-77425364 None:intergenic 30.0%
TAGGATAGTAGAAGTGGTTT+AGG - chr6_1:77422378-77422397 Msa0893390:intron 35.0%
AGGATAGTAGAAGTGGTTTA+GGG - chr6_1:77422379-77422398 Msa0893390:intron 35.0%
! GAAGTGATTTGGGGTTAAAA+CGG - chr6_1:77422691-77422710 Msa0893390:intron 35.0%
AAGTTCACACACACTAATTG+CGG - chr6_1:77423107-77423126 Msa0893390:intron 35.0%
CGAGTACATTTGATATGTTG+GGG + chr6_1:77423171-77423190 None:intergenic 35.0%
ATTGACTGAGCTGCAATTAT+AGG - chr6_1:77423200-77423219 Msa0893390:intron 35.0%
AGTTTCTGTACCGCATAAAA+TGG - chr6_1:77423235-77423254 Msa0893390:intron 35.0%
GTTTCTGTACCGCATAAAAT+GGG - chr6_1:77423236-77423255 Msa0893390:intron 35.0%
!! ATCCAATGGGCTATTGATTT+GGG - chr6_1:77423279-77423298 Msa0893390:intron 35.0%
TTCACTCATTTGATAAGCTC+AGG + chr6_1:77423342-77423361 None:intergenic 35.0%
TTATTCCGCCAAGTATATGA+AGG - chr6_1:77423401-77423420 Msa0893390:intron 35.0%
! GTAGTCCTTTTGTTAATCAG+CGG - chr6_1:77423461-77423480 Msa0893390:intron 35.0%
! TAGTCCTTTTGTTAATCAGC+GGG - chr6_1:77423462-77423481 Msa0893390:intron 35.0%
AAAGAAACCCAAAGATGCAA+AGG + chr6_1:77423572-77423591 None:intergenic 35.0%
AAAGAACTGCAAAAAGGCAA+GGG + chr6_1:77423599-77423618 None:intergenic 35.0%
! TTTTTGCAGTTCTTTGTGCT+GGG - chr6_1:77423604-77423623 Msa0893390:intron 35.0%
TTAGTCCCTTTCTATCTAAC+TGG + chr6_1:77423809-77423828 None:intergenic 35.0%
GGTTATCTAAATTCTATGGC+AGG + chr6_1:77423898-77423917 None:intergenic 35.0%
CAATAGTCGCAAGTTTAAGT+TGG - chr6_1:77423956-77423975 Msa0893390:intron 35.0%
! TGTATTTGTTGACGATGTCT+TGG - chr6_1:77424215-77424234 Msa0893390:intron 35.0%
! ATAATGAGTCTCTAAGGGAA+AGG + chr6_1:77424244-77424263 None:intergenic 35.0%
ATATCAGTGCAGAACATGTA+CGG + chr6_1:77424486-77424505 None:intergenic 35.0%
! ACATGTTCTGCACTGATATA+TGG - chr6_1:77424487-77424506 Msa0893390:intron 35.0%
ATTCACACCTGCTTTACATT+TGG - chr6_1:77424530-77424549 Msa0893390:intron 35.0%
ATTGTGTTAGAGCAATTCTG+TGG - chr6_1:77424636-77424655 Msa0893390:intron 35.0%
TTGTGTTAGAGCAATTCTGT+GGG - chr6_1:77424637-77424656 Msa0893390:intron 35.0%
! CGATACGCTAATACTGTTTT+AGG + chr6_1:77424680-77424699 None:intergenic 35.0%
TTGTGGCGCTTCTTTATATT+GGG - chr6_1:77424736-77424755 Msa0893390:intron 35.0%
GCTTCTTTATATTGGGAAGA+TGG - chr6_1:77424743-77424762 Msa0893390:intron 35.0%
CAGCAGTTATATCCATTGTT+AGG + chr6_1:77424805-77424824 None:intergenic 35.0%
ACAATGGATATAACTGCTGT+TGG - chr6_1:77424806-77424825 Msa0893390:intron 35.0%
CAATGGATATAACTGCTGTT+GGG - chr6_1:77424807-77424826 Msa0893390:intron 35.0%
! TTGATGATCTTGTCACTAGA+TGG - chr6_1:77424915-77424934 Msa0893390:intron 35.0%
TGATGATCTTGTCACTAGAT+GGG - chr6_1:77424916-77424935 Msa0893390:intron 35.0%
AATAGAAAACGATCTACCTC+AGG - chr6_1:77424961-77424980 Msa0893390:intron 35.0%
! TGTGTTTTCCTACTAATCGT+CGG + chr6_1:77425064-77425083 None:intergenic 35.0%
TAGGAAAACACAACTGATAC+TGG - chr6_1:77425072-77425091 Msa0893390:CDS 35.0%
TTTCATTCCTGAATCTGTAC+AGG + chr6_1:77425133-77425152 None:intergenic 35.0%
!! TATGTCCTTCAAGTTGAAAG+AGG - chr6_1:77425272-77425291 Msa0893390:CDS 35.0%
!! ATGTCCTTCAAGTTGAAAGA+GGG - chr6_1:77425273-77425292 Msa0893390:CDS 35.0%
! TTCATAGGAGCCGTAGATTT+TGG + chr6_1:77421566-77421585 None:intergenic 40.0%
GTCGTCAAGAACTTCTTCAT+AGG + chr6_1:77421581-77421600 None:intergenic 40.0%
CGTAAACAGCGTCAACATTA+GGG + chr6_1:77421603-77421622 None:intergenic 40.0%
ACGTAAACAGCGTCAACATT+AGG + chr6_1:77421604-77421623 None:intergenic 40.0%
GGAGTTTGATGAGATTGTGA+AGG - chr6_1:77421720-77421739 Msa0893390:CDS 40.0%
AGTTTATGGATGGGACTATG+TGG - chr6_1:77421764-77421783 Msa0893390:CDS 40.0%
!! ATGAAAGGGTTTTTGGAGGA+TGG - chr6_1:77421811-77421830 Msa0893390:CDS 40.0%
!! TGAAAGGGTTTTTGGAGGAT+GGG - chr6_1:77421812-77421831 Msa0893390:CDS 40.0%
GAGGTTTGGGAAGGTTAAAT+CGG - chr6_1:77421837-77421856 Msa0893390:CDS 40.0%
!! AGGACCCATTTCTGAAATGT+GGG - chr6_1:77422174-77422193 Msa0893390:CDS 40.0%
CTATCTGTCAGTATCATGTC+AGG + chr6_1:77422638-77422657 None:intergenic 40.0%
!! CACACACTTTTTGTACCTAG+CGG - chr6_1:77423082-77423101 Msa0893390:intron 40.0%
! ATGCACAAGCCCATTTTATG+CGG + chr6_1:77423248-77423267 None:intergenic 40.0%
!! CATCCAATGGGCTATTGATT+TGG - chr6_1:77423278-77423297 Msa0893390:intron 40.0%
!! TCCAATGGGCTATTGATTTG+GGG - chr6_1:77423280-77423299 Msa0893390:intron 40.0%
TACGACCTTCATATACTTGG+CGG + chr6_1:77423409-77423428 None:intergenic 40.0%
! AGTCCTTTTGTTAATCAGCG+GGG - chr6_1:77423463-77423482 Msa0893390:intron 40.0%
GCAACGACAGCAAAAACAAT+AGG + chr6_1:77423512-77423531 None:intergenic 40.0%
!! CTTGTTTTCACCAAGTGTGT+TGG - chr6_1:77423546-77423565 Msa0893390:intron 40.0%
CAAAGAACTGCAAAAAGGCA+AGG + chr6_1:77423600-77423619 None:intergenic 40.0%
CAGCACAAAGAACTGCAAAA+AGG + chr6_1:77423605-77423624 None:intergenic 40.0%
! CTTTTTGCAGTTCTTTGTGC+TGG - chr6_1:77423603-77423622 Msa0893390:intron 40.0%
GCATAATAGAGATCAGCAGA+AGG - chr6_1:77423711-77423730 Msa0893390:intron 40.0%
TTTGATTCAGAAGAAACGCC+AGG + chr6_1:77424185-77424204 None:intergenic 40.0%
GGCGTTTCTTCTGAATCAAA+TGG - chr6_1:77424185-77424204 Msa0893390:intron 40.0%
ATCAGCACCAAATGTAAAGC+AGG + chr6_1:77424540-77424559 None:intergenic 40.0%
ATGTCGTTCTCGAGAAAATC+AGG + chr6_1:77424563-77424582 None:intergenic 40.0%
!! ACTCCAGCTTTATTAAGCAC+TGG + chr6_1:77424707-77424726 None:intergenic 40.0%
CTTGTGGCGCTTCTTTATAT+TGG - chr6_1:77424735-77424754 Msa0893390:intron 40.0%
ATAACTGCTGTTGGGACAAA+AGG - chr6_1:77424815-77424834 Msa0893390:intron 40.0%
GATGATCTTGTCACTAGATG+GGG - chr6_1:77424917-77424936 Msa0893390:intron 40.0%
! GGTAACCGAATTTTCTCGTT+TGG - chr6_1:77424994-77425013 Msa0893390:intron 40.0%
! AACCGAATTTTCTCGTTTGG+TGG - chr6_1:77424997-77425016 Msa0893390:intron 40.0%
TGCCACCAAACGAGAAAATT+CGG + chr6_1:77425002-77425021 None:intergenic 40.0%
AGTGAAGGCTTCGATTGATA+AGG - chr6_1:77425099-77425118 Msa0893390:CDS 40.0%
GTGAAGGCTTCGATTGATAA+GGG - chr6_1:77425100-77425119 Msa0893390:CDS 40.0%
! TTTTGAGCCTGTACAGATTC+AGG - chr6_1:77425123-77425142 Msa0893390:CDS 40.0%
ACAAAGATCCAAGTTCAGCA+GGG + chr6_1:77425176-77425195 None:intergenic 40.0%
AACAAAGATCCAAGTTCAGC+AGG + chr6_1:77425177-77425196 None:intergenic 40.0%
TTGCGACGCACTAATAACAT+CGG + chr6_1:77425200-77425219 None:intergenic 40.0%
TGCGTCACAATTATTGGAAC+TGG + chr6_1:77425339-77425358 None:intergenic 40.0%
CAAACCGAACCAATCCGTTT+CGG - chr6_1:77421400-77421419 Msa0893390:three_prime_UTR 45.0%
!! AATGCCGAAACGGATTGGTT+CGG + chr6_1:77421407-77421426 None:intergenic 45.0%
! ATAGGAGCCGTAGATTTTGG+CGG + chr6_1:77421563-77421582 None:intergenic 45.0%
!! GAAGGGGAAGCATGTTTTGT+TGG - chr6_1:77421672-77421691 Msa0893390:CDS 45.0%
!! GCATGTTTTGTTGGAGAAGC+CGG - chr6_1:77421681-77421700 Msa0893390:CDS 45.0%
! TGAGATTGTGAAGGTGTGTG+AGG - chr6_1:77421729-77421748 Msa0893390:CDS 45.0%
GTGGATGCATCATCCTAGAA+CGG - chr6_1:77421783-77421802 Msa0893390:CDS 45.0%
CTAGAACGGAGGTGATGAAA+GGG - chr6_1:77421797-77421816 Msa0893390:CDS 45.0%
! GGAGGTGATGAAAGGGTTTT+TGG - chr6_1:77421804-77421823 Msa0893390:CDS 45.0%
!! GGTGATGAAAGGGTTTTTGG+AGG - chr6_1:77421807-77421826 Msa0893390:CDS 45.0%
!! GAAAGGGTTTTTGGAGGATG+GGG - chr6_1:77421813-77421832 Msa0893390:CDS 45.0%
! GATTAGACGTGTCTTGGTGT+CGG - chr6_1:77421923-77421942 Msa0893390:CDS 45.0%
CTTCGTGTCAGTGTCTACAT+TGG + chr6_1:77422065-77422084 None:intergenic 45.0%
GTAGACACTGACACGAAGAA+AGG - chr6_1:77422067-77422086 Msa0893390:CDS 45.0%
CTCTTTCTAACAAATCCGCG+TGG - chr6_1:77422134-77422153 Msa0893390:CDS 45.0%
CTAACAAATCCGCGTGGATT+TGG - chr6_1:77422140-77422159 Msa0893390:CDS 45.0%
ATAAGGTGACCAAATCCACG+CGG + chr6_1:77422152-77422171 None:intergenic 45.0%
! TGGATTTGGTCACCTTATGC+AGG - chr6_1:77422154-77422173 Msa0893390:CDS 45.0%
TCAGAAATGGGTCCTGCATA+AGG + chr6_1:77422169-77422188 None:intergenic 45.0%
!! CAGGACCCATTTCTGAAATG+TGG - chr6_1:77422173-77422192 Msa0893390:CDS 45.0%
GGGTCCCACATTTCAGAAAT+GGG + chr6_1:77422181-77422200 None:intergenic 45.0%
TGGGTCCCACATTTCAGAAA+TGG + chr6_1:77422182-77422201 None:intergenic 45.0%
AAGCAGAAGCTGTGTTTGTG+TGG - chr6_1:77422535-77422554 Msa0893390:intron 45.0%
GAGGTTTGGGCAGGTTAAAT+CGG - chr6_1:77422568-77422587 Msa0893390:intron 45.0%
GCTGTATGCGTAAACTAGTG+AGG + chr6_1:77423008-77423027 None:intergenic 45.0%
!! TGCGGAGAAAAGAAGCATTG+CGG - chr6_1:77423125-77423144 Msa0893390:intron 45.0%
!! AAAAGAAGCATTGCGGGTTG+CGG - chr6_1:77423132-77423151 Msa0893390:intron 45.0%
ACATTTGATATGTTGGGGCG+CGG + chr6_1:77423166-77423185 None:intergenic 45.0%
!! CCAATGGGCTATTGATTTGG+GGG - chr6_1:77423281-77423300 Msa0893390:intron 45.0%
!! CAATGGGCTATTGATTTGGG+GGG - chr6_1:77423282-77423301 Msa0893390:intron 45.0%
!! ATTGATTTGGGGGGTTGGTT+AGG - chr6_1:77423291-77423310 Msa0893390:intron 45.0%
! AAGCCCCGCTGATTAACAAA+AGG + chr6_1:77423469-77423488 None:intergenic 45.0%
TGGTGAAAACAAGCACCAGT+AGG + chr6_1:77423539-77423558 None:intergenic 45.0%
!! TGTGTTGGCCTTTGCATCTT+TGG - chr6_1:77423561-77423580 Msa0893390:intron 45.0%
!! GTGTTGGCCTTTGCATCTTT+GGG - chr6_1:77423562-77423581 Msa0893390:intron 45.0%
GAGCCAGTGCTTAATAAAGC+TGG - chr6_1:77424701-77424720 Msa0893390:intron 45.0%
GCTGGAGTGATTCTATCTTG+TGG - chr6_1:77424719-77424738 Msa0893390:intron 45.0%
AGAAAACGATCTACCTCAGG+AGG - chr6_1:77424964-77424983 Msa0893390:intron 45.0%
ACGCGAAACCAGAGAAGAAA+TGG - chr6_1:77425038-77425057 Msa0893390:CDS 45.0%
AGAAATGGCCGACGATTAGT+AGG - chr6_1:77425053-77425072 Msa0893390:CDS 45.0%
ACTGATACTGGATGCAGTGA+AGG - chr6_1:77425084-77425103 Msa0893390:CDS 45.0%
!! TCCTTCAAGTTGAAAGAGGG+TGG - chr6_1:77425276-77425295 Msa0893390:CDS 45.0%
ACCACCCTCTTTCAACTTGA+AGG + chr6_1:77425280-77425299 None:intergenic 45.0%
!!! CAAAATAATTTTTTTATAAT+CGG + chr6_1:77422416-77422435 None:intergenic 5.0%
CCAATCCGTTTCGGCATTCT+CGG - chr6_1:77421409-77421428 Msa0893390:three_prime_UTR 50.0%
! TGAGAGTTTGCGGGCTATGT+CGG + chr6_1:77421440-77421459 None:intergenic 50.0%
!! TGGTTGCTTTGGAGAGAGTG+CGG + chr6_1:77421510-77421529 None:intergenic 50.0%
GAAGTTGTTGGAGTGTGCGA+AGG + chr6_1:77421533-77421552 None:intergenic 50.0%
ACATGCAACGTCGTCGGTAA+CGG + chr6_1:77421628-77421647 None:intergenic 50.0%
CACTTCACATGCAACGTCGT+CGG + chr6_1:77421634-77421653 None:intergenic 50.0%
GACGACGTTGCATGTGAAGT+GGG - chr6_1:77421633-77421652 Msa0893390:three_prime_UTR 50.0%
!! TGTTTTGTTGGAGAAGCCGG+TGG - chr6_1:77421684-77421703 Msa0893390:CDS 50.0%
! TGAAGGTGTGTGAGGAGTGT+GGG - chr6_1:77421737-77421756 Msa0893390:CDS 50.0%
TGTGGGGTGCAGTTTATGGA+TGG - chr6_1:77421754-77421773 Msa0893390:CDS 50.0%
GTGGGGTGCAGTTTATGGAT+GGG - chr6_1:77421755-77421774 Msa0893390:CDS 50.0%
GATGCATCATCCTAGAACGG+AGG - chr6_1:77421786-77421805 Msa0893390:CDS 50.0%
CCTTTCATCACCTCCGTTCT+AGG + chr6_1:77421799-77421818 None:intergenic 50.0%
CCTAGAACGGAGGTGATGAA+AGG - chr6_1:77421796-77421815 Msa0893390:CDS 50.0%
TAGGAACGACTGACACTCCT+CGG - chr6_1:77421901-77421920 Msa0893390:CDS 50.0%
! TCCTCGGATTAGACGTGTCT+TGG - chr6_1:77421917-77421936 Msa0893390:CDS 50.0%
ACCAAGACACGTCTAATCCG+AGG + chr6_1:77421921-77421940 None:intergenic 50.0%
CAGAAGCTGTGTTTGTGTGG+AGG - chr6_1:77422538-77422557 Msa0893390:intron 50.0%
AGCTGTGTTTGTGTGGAGGA+TGG - chr6_1:77422542-77422561 Msa0893390:intron 50.0%
GCTGTGTTTGTGTGGAGGAT+GGG - chr6_1:77422543-77422562 Msa0893390:intron 50.0%
CTGTGTTTGTGTGGAGGATG+GGG - chr6_1:77422544-77422563 Msa0893390:intron 50.0%
GCGTAAACTAGTGAGGAGTG+AGG + chr6_1:77423001-77423020 None:intergenic 50.0%
!! GCGGAGAAAAGAAGCATTGC+GGG - chr6_1:77423126-77423145 Msa0893390:intron 50.0%
!! AAAGAAGCATTGCGGGTTGC+GGG - chr6_1:77423133-77423152 Msa0893390:intron 50.0%
CCCCCAAATCAATAGCCCAT+TGG + chr6_1:77423284-77423303 None:intergenic 50.0%
ATCAGCGGGGCTTTACTTTC+TGG - chr6_1:77423476-77423495 Msa0893390:intron 50.0%
GATGCAAAGGCCAACACACT+TGG + chr6_1:77423559-77423578 None:intergenic 50.0%
TCTACCTCAGGAGGCTCTTA+TGG - chr6_1:77424973-77424992 Msa0893390:intron 50.0%
GTTACCATAAGAGCCTCCTG+AGG + chr6_1:77424980-77424999 None:intergenic 50.0%
ATCGTCGGCCATTTCTTCTC+TGG + chr6_1:77425049-77425068 None:intergenic 50.0%
TGTCTTCACCCTGCTGAACT+TGG - chr6_1:77425165-77425184 Msa0893390:CDS 50.0%
TGTGACGCAATTTGTCGCTG+TGG - chr6_1:77425350-77425369 Msa0893390:CDS 50.0%
CCGAGAATGCCGAAACGGAT+TGG + chr6_1:77421412-77421431 None:intergenic 55.0%
CACAGCCGAGAATGCCGAAA+CGG + chr6_1:77421417-77421436 None:intergenic 55.0%
AATGGCGCGTGAGAGTTTGC+GGG + chr6_1:77421449-77421468 None:intergenic 55.0%
GAATGGCGCGTGAGAGTTTG+CGG + chr6_1:77421450-77421469 None:intergenic 55.0%
GTGTGCGAAGGTGGTTGCTT+TGG + chr6_1:77421521-77421540 None:intergenic 55.0%
GTTGTTGGAGTGTGCGAAGG+TGG + chr6_1:77421530-77421549 None:intergenic 55.0%
!! CGTAGATTTTGGCGGTGGGA+GGG + chr6_1:77421555-77421574 None:intergenic 55.0%
CCTCCCACCGCCAAAATCTA+CGG - chr6_1:77421553-77421572 Msa0893390:three_prime_UTR 55.0%
!! GAGCCGTAGATTTTGGCGGT+GGG + chr6_1:77421559-77421578 None:intergenic 55.0%
CGACGACGTTGCATGTGAAG+TGG - chr6_1:77421632-77421651 Msa0893390:three_prime_UTR 55.0%
GACGTTGCATGTGAAGTGGG+CGG - chr6_1:77421636-77421655 Msa0893390:three_prime_UTR 55.0%
TTTGTTGGAGAAGCCGGTGG+CGG - chr6_1:77421687-77421706 Msa0893390:CDS 55.0%
TCCTTCACACTAACCGCCAC+CGG + chr6_1:77421703-77421722 None:intergenic 55.0%
! GTGAAGGTGTGTGAGGAGTG+TGG - chr6_1:77421736-77421755 Msa0893390:CDS 55.0%
! GAAGGTGTGTGAGGAGTGTG+GGG - chr6_1:77421738-77421757 Msa0893390:CDS 55.0%
GGAGTGTGGGGTGCAGTTTA+TGG - chr6_1:77421750-77421769 Msa0893390:CDS 55.0%
!! GGTTTTTGGAGGATGGGGAG+AGG - chr6_1:77421818-77421837 Msa0893390:CDS 55.0%
TTGGAGGATGGGGAGAGGTT+TGG - chr6_1:77421823-77421842 Msa0893390:CDS 55.0%
TGGAGGATGGGGAGAGGTTT+GGG - chr6_1:77421824-77421843 Msa0893390:CDS 55.0%
! TATCTGTGTGGGTGTCGTGC+TGG + chr6_1:77421968-77421987 None:intergenic 55.0%
TTTGTGTGGAGGATGGGGAG+AGG - chr6_1:77422549-77422568 Msa0893390:intron 55.0%
TGGAGGATGGGGAGAGGTTT+GGG - chr6_1:77421824-77421843 Msa0893390:CDS 55.0%
TGTGTGTGAACTTCGCCGCT+AGG + chr6_1:77423068-77423087 None:intergenic 55.0%
TGTGTGTGAACTTCGCCGCT+AGG + chr6_1:77423068-77423087 None:intergenic 55.0%
!! GGGCTATTGATTTGGGGGGT+TGG - chr6_1:77423286-77423305 Msa0893390:intron 55.0%
! GCTGTCGTTGCTTTGCCTAC+TGG - chr6_1:77423521-77423540 Msa0893390:intron 55.0%
TTGAAACCCTGCTGCATGCC+TGG - chr6_1:77424164-77424183 Msa0893390:intron 55.0%
AAGCCAGATCTCGACGCTCT+TGG - chr6_1:77424590-77424609 Msa0893390:intron 55.0%
GGCGGTGGAAGAGAGGAGAA+TGG + chr6_1:77421467-77421486 None:intergenic 60.0%
!! AGATGGTGGCGGTGGAAGAG+AGG + chr6_1:77421474-77421493 None:intergenic 60.0%
!! CCGTAGATTTTGGCGGTGGG+AGG + chr6_1:77421556-77421575 None:intergenic 60.0%
!! GGAGCCGTAGATTTTGGCGG+TGG + chr6_1:77421560-77421579 None:intergenic 60.0%
GTTGCATGTGAAGTGGGCGG+TGG - chr6_1:77421639-77421658 Msa0893390:three_prime_UTR 60.0%
GGATGGGGAGAGGTTTGGGA+AGG - chr6_1:77421828-77421847 Msa0893390:CDS 60.0%
! TGTGGGTGTCGTGCTGGTGT+CGG + chr6_1:77421962-77421981 None:intergenic 60.0%
GTGGAGGATGGGGAGAGGTT+TGG - chr6_1:77422554-77422573 Msa0893390:intron 60.0%
GAAACGCCAGGCATGCAGCA+GGG + chr6_1:77424173-77424192 None:intergenic 60.0%
AGAAACGCCAGGCATGCAGC+AGG + chr6_1:77424174-77424193 None:intergenic 60.0%
!! GAGCCAAGAGCGTCGAGATC+TGG + chr6_1:77424596-77424615 None:intergenic 60.0%
! CTCGACGCTCTTGGCTCTCT+TGG - chr6_1:77424599-77424618 Msa0893390:intron 60.0%
! CTTGGCTCTCTTGGCGACGA+AGG - chr6_1:77424608-77424627 Msa0893390:intron 60.0%
GCTCTCTTGGCGACGAAGGA+TGG - chr6_1:77424612-77424631 Msa0893390:intron 60.0%
GGCGGTGGGAGGGAAGTTGT+TGG + chr6_1:77421545-77421564 None:intergenic 65.0%
TGTGAAGTGGGCGGTGGCTG+CGG - chr6_1:77421645-77421664 Msa0893390:exon 65.0%
! GCCGGTGGCGGTTAGTGTGA+AGG - chr6_1:77421699-77421718 Msa0893390:CDS 65.0%
GGATGGGGAGAGGTTTGGGC+AGG - chr6_1:77422559-77422578 Msa0893390:intron 65.0%
ACCGCCACCATCTCCGCCGT+CGG - chr6_1:77421481-77421500 Msa0893390:three_prime_UTR 70.0%
! GGAGAGAGTGCGGCTGCCGA+CGG + chr6_1:77421500-77421519 None:intergenic 70.0%
GCGGTGGCTGCGGCGAAGAA+GGG - chr6_1:77421655-77421674 Msa0893390:exon 70.0%
CGGTGGCTGCGGCGAAGAAG+GGG - chr6_1:77421656-77421675 Msa0893390:exon 70.0%
!! GACGGCGGAGATGGTGGCGG+TGG + chr6_1:77421482-77421501 None:intergenic 75.0%
! GCCGACGGCGGAGATGGTGG+CGG + chr6_1:77421485-77421504 None:intergenic 75.0%
GCTGCCGACGGCGGAGATGG+TGG + chr6_1:77421488-77421507 None:intergenic 75.0%
! GAGAGTGCGGCTGCCGACGG+CGG + chr6_1:77421497-77421516 None:intergenic 75.0%
GGCGGTGGCTGCGGCGAAGA+AGG - chr6_1:77421654-77421673 Msa0893390:exon 75.0%
! GCGGCTGCCGACGGCGGAGA+TGG + chr6_1:77421491-77421510 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 77421394 77425420 77421394 ID=Msa0893390;Name=Msa0893390
chr6_1 mRNA 77421394 77425420 77421394 ID=Msa0893390-mRNA-1;Parent=Msa0893390;Name=Msa0893390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0.5|1|1|1|2|270|344
chr6_1 exon 77421394 77422284 77421394 ID=Msa0893390-mRNA-1:exon:12848;Parent=Msa0893390-mRNA-1
chr6_1 exon 77425007 77425420 77425007 ID=Msa0893390-mRNA-1:exon:12847;Parent=Msa0893390-mRNA-1
chr6_1 CDS 77425007 77425420 77425007 ID=Msa0893390-mRNA-1:cds;Parent=Msa0893390-mRNA-1
chr6_1 CDS 77421664 77422284 77421664 ID=Msa0893390-mRNA-1:cds;Parent=Msa0893390-mRNA-1
chr6_1 three_prime_UTR 77421394 77421663 77421394 ID=Msa0893390-mRNA-1:three_prime_utr;Parent=Msa0893390-mRNA-1
Gene Sequence

>Msa0893390

ATGTCACAAACCGAACCAATCCGTTTCGGCATTCTCGGCTGTGCCGACATAGCCCGCAAACTCTCACGCGCCATTCTCCTCTCTTCCACCGCCACCATCTCCGCCGTCGGCAGCCGCACTCTCTCCAAAGCAACCACCTTCGCACACTCCAACAACTTCCCTCCCACCGCCAAAATCTACGGCTCCTATGAAGAAGTTCTTGACGACCCTAATGTTGACGCTGTTTACGTGCCGTTACCGACGACGTTGCATGTGAAGTGGGCGGTGGCTGCGGCGAAGAAGGGGAAGCATGTTTTGTTGGAGAAGCCGGTGGCGGTTAGTGTGAAGGAGTTTGATGAGATTGTGAAGGTGTGTGAGGAGTGTGGGGTGCAGTTTATGGATGGGACTATGTGGATGCATCATCCTAGAACGGAGATTCACACCTGCTTTACATTTGGTGCTGATCCTGATTTTCTCGAGAACGACATTCGTGTGAAGCCAGATCTCGACGCTCTTGGCTCTCTTGGCGACGAAGGATGGTATTGTGTTAGAGCAATTCTGTGGGCTAACAATTACGAATTACCTAAAACAGTATTAGCGTATCGCGAGCCAGTGCTTAATAAAGCTGGAGTGATTCTATCTTGTGGCGCTTCTTTATATTGGGAAGATGGAAGAGTAGCAACATTCTATTGCTCTTTCTTATCTAACCTAACAATGGATATAACTGCTGTTGGGACAAAAGGAACACTTCATGTTCATGATTTCATCATCCCTTATGAAGAAAAGAAAGCATCATTTTATGCAGCTTCAGAATCAAGCTTTGATGATCTTGTCACTAGATGGGGTTCGCAGCCGAGTAAGCACGTAATAGAAAACGATCTACCTCAGGAGGCTCTTATGGTAACCGAATTTTCTCGTTTGGTGGCAGAAATCAAATTCAAAAACGCGAAACCAGAGAAGAAATGGCCGACGATTAGTAGGAAAACACAACTGATACTGGATGCAGTGAAGGCTTCGATTGATAAGGGTTTTGAGCCTGTACAGATTCAGGAATGA

Protein sequence

>Msa0893390

MSQTEPIRFGILGCADIARKLSRAILLSSTATISAVGSRTLSKATTFAHSNNFPPTAKIYGSYEEVLDDPNVDAVYVPLPTTLHVKWAVAAAKKGKHVLLEKPVAVSVKEFDEIVKVCEECGVQFMDGTMWMHHPRTEIHTCFTFGADPDFLENDIRVKPDLDALGSLGDEGWYCVRAILWANNYELPKTVLAYREPVLNKAGVILSCGASLYWEDGRVATFYCSFLSNLTMDITAVGTKGTLHVHDFIIPYEEKKASFYAASESSFDDLVTRWGSQPSKHVIENDLPQEALMVTEFSRLVAEIKFKNAKPEKKWPTISRKTQLILDAVKASIDKGFEPVQIQE*