AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223280 MtrunA17_Chr2g0328571 92.398 171 7 4 1 170 18 183 1.02e-80 237
Msa0223280 MtrunA17_Chr1g0185161 90.643 171 8 6 1 170 1 164 1.41e-77 228
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223280 AT2G29180.1 41.772 158 75 5 20 163 5 159 6.21e-24 92.4

Find 45 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTATCCGTTATCACTAT+TGG 0.245133 2_1:-72829168 Msa0223280:CDS
GCTTATCCGTTATCACTATT+GGG 0.260636 2_1:-72829167 Msa0223280:CDS
ATGCTCCTAGTCCTAAAATT+TGG 0.273314 2_1:+72829569 None:intergenic
TCTGGTTGTAGTAGTGATAA+TGG 0.300412 2_1:+72829362 None:intergenic
GAAAGGAAGGTTGCAATCTT+TGG 0.300675 2_1:+72829459 None:intergenic
GAATACAACTGAGAATTTAC+TGG 0.312917 2_1:-72827138 Msa0223280:three_prime_UTR
GCTGTAGCAGCAACAGGATT+TGG 0.334339 2_1:+72829303 None:intergenic
TTCAAAGGAAGTCCAAACTA+TGG 0.343791 2_1:-72829326 Msa0223280:CDS
CATTGATGCTTCGGAGCAAT+TGG 0.360695 2_1:-72829259 Msa0223280:CDS
TACTCAACTTGCTAAATCAT+AGG 0.367002 2_1:+72827208 None:intergenic
CTGGTTGTAGTAGTGATAAT+GGG 0.369858 2_1:+72829363 None:intergenic
AACAGGATTTGGCCATAGTT+TGG 0.372494 2_1:+72829314 None:intergenic
AAAAGAAAAGAAAAGTAGTA+AGG 0.384781 2_1:-72827348 Msa0223280:CDS
AGGGCAGGACCTAAAGGATT+TGG 0.404020 2_1:-72827328 Msa0223280:CDS
ACTGAAGATGATGATTGATT+AGG 0.408774 2_1:-72827289 Msa0223280:exon
GAGAAAGATGAAGAAGTTGT+TGG 0.423658 2_1:+72829387 None:intergenic
TGCTACAGCCATTGATGCTT+CGG 0.431580 2_1:-72829268 Msa0223280:CDS
TCAACAGCTGTAGCAGCAAC+AGG 0.437132 2_1:+72829297 None:intergenic
CAATTGCTCCGAAGCATCAA+TGG 0.447559 2_1:+72829260 None:intergenic
AGAAGATGATGTTGAAAGGA+AGG 0.478894 2_1:+72829446 None:intergenic
TCATCAACTACCACTGATGA+TGG 0.480753 2_1:-72829234 Msa0223280:CDS
AAAGAAAAGAAAAGTAGTAA+GGG 0.491413 2_1:-72827347 Msa0223280:CDS
AAGAAGAAGATGATGTTGAA+AGG 0.496918 2_1:+72829442 None:intergenic
ACTCAACTTGCTAAATCATA+GGG 0.503216 2_1:+72827209 None:intergenic
GTAGTAAGGGCAGGACCTAA+AGG 0.510055 2_1:-72827334 Msa0223280:CDS
GGAGCATCCTCTCAATCCCT+TGG 0.515120 2_1:-72829553 Msa0223280:five_prime_UTR
CTTATCCGTTATCACTATTG+GGG 0.525510 2_1:-72829166 Msa0223280:intron
CATCAACTACCACTGATGAT+GGG 0.525641 2_1:-72829233 Msa0223280:CDS
AAAAGAAAAGTAGTAAGGGC+AGG 0.536130 2_1:-72827343 Msa0223280:CDS
TACAACTTCTCAAACATCCA+AGG 0.540197 2_1:+72829536 None:intergenic
ATATACCCCAATAGTGATAA+CGG 0.550650 2_1:+72829161 None:intergenic
TTTCTTGACAAAGAGAGAGA+AGG 0.571247 2_1:-72827410 Msa0223280:CDS
CTAAATCATAGGGGAAAACA+AGG 0.571574 2_1:+72827219 None:intergenic
CAAACATCCAAGGGATTGAG+AGG 0.581083 2_1:+72829546 None:intergenic
TGCAGTGGCCATTGCTGACG+TGG 0.589554 2_1:+72829506 None:intergenic
AGAGTGGGCCACGTCAGCAA+TGG 0.607603 2_1:-72829514 Msa0223280:exon
ATCAACTACCACTGATGATG+GGG 0.608198 2_1:-72829232 Msa0223280:CDS
ACAACTTCTCAAACATCCAA+GGG 0.612691 2_1:+72829537 None:intergenic
AAGAGACACCCCATCATCAG+TGG 0.647668 2_1:+72829224 None:intergenic
TGTTTGAGAAGTTGTAGAGT+GGG 0.649491 2_1:-72829529 Msa0223280:five_prime_UTR
ATGTTTGAGAAGTTGTAGAG+TGG 0.651403 2_1:-72829530 Msa0223280:five_prime_UTR
CTCAACTTGCTAAATCATAG+GGG 0.661129 2_1:+72827210 None:intergenic
GAGAAAGAAGAAGCAGCTAG+CGG 0.687353 2_1:-72827379 Msa0223280:CDS
ATAATGAATAACAATGTGTG+TGG 0.699753 2_1:+72827111 None:intergenic
TGATGATGCAAATAATGCAG+TGG 0.718262 2_1:+72829491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTCTATATTAATAAAAGAAT+TGG + chr2_1:72827573-72827592 None:intergenic 15.0%
!!! CAATTCTTTTATTAATATAG+AGG - chr2_1:72827571-72827590 Msa0223280:intron 15.0%
!!! TTTGAAATATTCATAAAGTA+GGG + chr2_1:72828189-72828208 None:intergenic 15.0%
!!! TTTTGAAATATTCATAAAGT+AGG + chr2_1:72828190-72828209 None:intergenic 15.0%
!!! ACATTAAATATTTTTTTTGG+TGG - chr2_1:72828289-72828308 Msa0223280:intron 15.0%
!!! AAATGATTATGAACTAATTT+TGG + chr2_1:72828724-72828743 None:intergenic 15.0%
!! TATTCAAAATGAACTAATTA+GGG + chr2_1:72828751-72828770 None:intergenic 15.0%
!!! TTTTTCGTTTTGTAATTTTA+TGG - chr2_1:72828970-72828989 Msa0223280:intron 15.0%
!!! TTTTATAAATGTAAATGACT+CGG - chr2_1:72829112-72829131 Msa0223280:intron 15.0%
!!! TTGAAAAAATATGGATTTTC+TGG + chr2_1:72827333-72827352 None:intergenic 20.0%
!!! GAAAATCCATATTTTTTCAA+AGG - chr2_1:72827333-72827352 Msa0223280:CDS 20.0%
!!! TTTAAAACTTAATAGAGTCA+TGG + chr2_1:72828217-72828236 None:intergenic 20.0%
!! TATATAATCAGGAACTAATT+TGG - chr2_1:72828260-72828279 Msa0223280:intron 20.0%
!!! TTAAATATTTTTTTTGGTGG+TGG - chr2_1:72828292-72828311 Msa0223280:intron 20.0%
!!! TTATTGACATTACATGTTTT+AGG - chr2_1:72828583-72828602 Msa0223280:intron 20.0%
!!! TATTGACATTACATGTTTTA+GGG - chr2_1:72828584-72828603 Msa0223280:intron 20.0%
!! CTAAATTGATTATGAAAGTT+AGG + chr2_1:72828665-72828684 None:intergenic 20.0%
!! CTATTCAAAATGAACTAATT+AGG + chr2_1:72828752-72828771 None:intergenic 20.0%
!!! GAATAGAATTTTACAATATG+AGG - chr2_1:72828766-72828785 Msa0223280:intron 20.0%
!!! TTGCGATTTTAATACATTAA+GGG + chr2_1:72828934-72828953 None:intergenic 20.0%
!!! TTTGCGATTTTAATACATTA+AGG + chr2_1:72828935-72828954 None:intergenic 20.0%
!! AAAAGAAAAGAAAAGTAGTA+AGG - chr2_1:72829326-72829345 Msa0223280:CDS 20.0%
!! AAAGAAAAGAAAAGTAGTAA+GGG - chr2_1:72829327-72829346 Msa0223280:CDS 20.0%
! TAGAGAAAAAAGTAGGATAT+TGG + chr2_1:72827819-72827838 None:intergenic 25.0%
! TGCAAAATAGAGAAAAAAGT+AGG + chr2_1:72827826-72827845 None:intergenic 25.0%
! GAAACATAAATCACTCAAAT+TGG + chr2_1:72827974-72827993 None:intergenic 25.0%
! TTATATAGAGTGGTTAGATA+TGG + chr2_1:72828247-72828266 None:intergenic 25.0%
! GCATAATCATAATATATGCA+AGG + chr2_1:72828336-72828355 None:intergenic 25.0%
!! TTTTGATCTTTGAATATGTG+AGG + chr2_1:72829078-72829097 None:intergenic 25.0%
! TTACTTAGCATTAGTATTCA+GGG - chr2_1:72829186-72829205 Msa0223280:CDS 25.0%
! ATAATGAATAACAATGTGTG+TGG + chr2_1:72829566-72829585 None:intergenic 25.0%
! GTAGCTCATAACCAAATTTT+AGG - chr2_1:72827094-72827113 Msa0223280:three_prime_UTR 30.0%
!!! CATAACCAAATTTTAGGACT+AGG - chr2_1:72827100-72827119 Msa0223280:three_prime_UTR 30.0%
AAGAAGAAGATGATGTTGAA+AGG + chr2_1:72827235-72827254 None:intergenic 30.0%
AGTAAAAACGTGTGTTGAAA+TGG + chr2_1:72827262-72827281 None:intergenic 30.0%
! GGACTTCCTTTGAAAAAATA+TGG + chr2_1:72827342-72827361 None:intergenic 30.0%
! CTTTTCTTCATTGCTTTCAT+TGG - chr2_1:72827485-72827504 Msa0223280:intron 30.0%
ATATACCCCAATAGTGATAA+CGG + chr2_1:72827516-72827535 None:intergenic 30.0%
TTAGTGAAAATTATCTCCCT+TGG - chr2_1:72827681-72827700 Msa0223280:intron 30.0%
AGGATATTGGTGTAATTGTT+AGG + chr2_1:72827806-72827825 None:intergenic 30.0%
ATTATGATCAATCTCTACGA+CGG + chr2_1:72828055-72828074 None:intergenic 30.0%
!! AAGAGTGTTCTACAAAGTTA+TGG + chr2_1:72828158-72828177 None:intergenic 30.0%
TCTAACCACTCTATATAATC+AGG - chr2_1:72828249-72828268 Msa0223280:intron 30.0%
TAGTTCCTGATTATATAGAG+TGG + chr2_1:72828257-72828276 None:intergenic 30.0%
ATAATCAGGAACTAATTTGG+AGG - chr2_1:72828263-72828282 Msa0223280:intron 30.0%
ATCATAATATATGCAAGGTC+CGG + chr2_1:72828331-72828350 None:intergenic 30.0%
! AACTAGTTTATACTTTGCAG+TGG + chr2_1:72828560-72828579 None:intergenic 30.0%
! TTTAAAGCAAACAGCCATTT+AGG - chr2_1:72828876-72828895 Msa0223280:intron 30.0%
CACATATTTAGAGACCTAAA+TGG + chr2_1:72828893-72828912 None:intergenic 30.0%
TTTAGGTCTCTAAATATGTG+AGG - chr2_1:72828893-72828912 Msa0223280:intron 30.0%
! CCTCCTATCTAAAACTATTT+CGG - chr2_1:72829161-72829180 Msa0223280:intron 30.0%
!!! ACACCGAAATAGTTTTAGAT+AGG + chr2_1:72829167-72829186 None:intergenic 30.0%
GTTACTTAGCATTAGTATTC+AGG - chr2_1:72829185-72829204 Msa0223280:CDS 30.0%
!! TTTTTGTTTGTTTGTGTTGC+AGG - chr2_1:72829219-72829238 Msa0223280:CDS 30.0%
! ATCTTTTGACCAAATCCTTT+AGG + chr2_1:72829358-72829377 None:intergenic 30.0%
ACTGAAGATGATGATTGATT+AGG - chr2_1:72829385-72829404 Msa0223280:CDS 30.0%
!! ACTCAACTTGCTAAATCATA+GGG + chr2_1:72829468-72829487 None:intergenic 30.0%
!! TACTCAACTTGCTAAATCAT+AGG + chr2_1:72829469-72829488 None:intergenic 30.0%
!! GTTTTAACAAAGAGAAGCAA+GGG - chr2_1:72829500-72829519 Msa0223280:exon 30.0%
GAATACAACTGAGAATTTAC+TGG - chr2_1:72829536-72829555 Msa0223280:five_prime_UTR 30.0%
ATGCTCCTAGTCCTAAAATT+TGG + chr2_1:72827108-72827127 None:intergenic 35.0%
ACAACTTCTCAAACATCCAA+GGG + chr2_1:72827140-72827159 None:intergenic 35.0%
TACAACTTCTCAAACATCCA+AGG + chr2_1:72827141-72827160 None:intergenic 35.0%
ATGTTTGAGAAGTTGTAGAG+TGG - chr2_1:72827144-72827163 Msa0223280:three_prime_UTR 35.0%
TGTTTGAGAAGTTGTAGAGT+GGG - chr2_1:72827145-72827164 Msa0223280:three_prime_UTR 35.0%
! TGATGATGCAAATAATGCAG+TGG + chr2_1:72827186-72827205 None:intergenic 35.0%
AGAAGATGATGTTGAAAGGA+AGG + chr2_1:72827231-72827250 None:intergenic 35.0%
GAGAAAGATGAAGAAGTTGT+TGG + chr2_1:72827290-72827309 None:intergenic 35.0%
CTGGTTGTAGTAGTGATAAT+GGG + chr2_1:72827314-72827333 None:intergenic 35.0%
TCTGGTTGTAGTAGTGATAA+TGG + chr2_1:72827315-72827334 None:intergenic 35.0%
TTCAAAGGAAGTCCAAACTA+TGG - chr2_1:72827348-72827367 Msa0223280:CDS 35.0%
GCTTATCCGTTATCACTATT+GGG - chr2_1:72827507-72827526 Msa0223280:intron 35.0%
CTTATCCGTTATCACTATTG+GGG - chr2_1:72827508-72827527 Msa0223280:intron 35.0%
TTGAGACATGCTTGCAATTT+CGG + chr2_1:72827608-72827627 None:intergenic 35.0%
TTCCATGTCATATTGTCCAA+GGG + chr2_1:72827700-72827719 None:intergenic 35.0%
ATTCCATGTCATATTGTCCA+AGG + chr2_1:72827701-72827720 None:intergenic 35.0%
! TTACCACACTACAAAGTATC+AGG - chr2_1:72827733-72827752 Msa0223280:intron 35.0%
! TACCACACTACAAAGTATCA+GGG - chr2_1:72827734-72827753 Msa0223280:intron 35.0%
GTGTAATTGTTAGGAACTCA+GGG + chr2_1:72827797-72827816 None:intergenic 35.0%
GTGCAGAAGTTAATTATCCA+GGG + chr2_1:72827851-72827870 None:intergenic 35.0%
!!! ATATTTTTTTTGGTGGTGGC+CGG - chr2_1:72828296-72828315 Msa0223280:intron 35.0%
TCATAATATATGCAAGGTCC+GGG + chr2_1:72828330-72828349 None:intergenic 35.0%
TGAGCTTAACCTAGTTAGTA+GGG + chr2_1:72828364-72828383 None:intergenic 35.0%
!!! CCGAAATAGTTTTAGATAGG+AGG + chr2_1:72829164-72829183 None:intergenic 35.0%
TTTCTTGACAAAGAGAGAGA+AGG - chr2_1:72829264-72829283 Msa0223280:CDS 35.0%
AAAAGAAAAGTAGTAAGGGC+AGG - chr2_1:72829331-72829350 Msa0223280:CDS 35.0%
CTAAATCATAGGGGAAAACA+AGG + chr2_1:72829458-72829477 None:intergenic 35.0%
!! CTCAACTTGCTAAATCATAG+GGG + chr2_1:72829467-72829486 None:intergenic 35.0%
!! CGTTTTAACAAAGAGAAGCA+AGG - chr2_1:72829499-72829518 Msa0223280:exon 35.0%
GAAAGGAAGGTTGCAATCTT+TGG + chr2_1:72827218-72827237 None:intergenic 40.0%
AACAGGATTTGGCCATAGTT+TGG + chr2_1:72827363-72827382 None:intergenic 40.0%
TCATCAACTACCACTGATGA+TGG - chr2_1:72827440-72827459 Msa0223280:intron 40.0%
CATCAACTACCACTGATGAT+GGG - chr2_1:72827441-72827460 Msa0223280:intron 40.0%
! ATCAACTACCACTGATGATG+GGG - chr2_1:72827442-72827461 Msa0223280:intron 40.0%
GGCTTATCCGTTATCACTAT+TGG - chr2_1:72827506-72827525 Msa0223280:intron 40.0%
! ACCACACTACAAAGTATCAG+GGG - chr2_1:72827735-72827754 Msa0223280:intron 40.0%
GGTGTAATTGTTAGGAACTC+AGG + chr2_1:72827798-72827817 None:intergenic 40.0%
! TTTCTCTATTTTGCACACCC+TGG - chr2_1:72827831-72827850 Msa0223280:intron 40.0%
GGTGCAGAAGTTAATTATCC+AGG + chr2_1:72827852-72827871 None:intergenic 40.0%
AATGTCATCCTTTGAGTGCA+AGG + chr2_1:72827873-72827892 None:intergenic 40.0%
TGGTCAAACAAGATGCAAGT+TGG + chr2_1:72827954-72827973 None:intergenic 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG - chr2_1:72828297-72828316 Msa0223280:intron 40.0%
CATAATATATGCAAGGTCCG+GGG + chr2_1:72828329-72828348 None:intergenic 40.0%
ATGCATTGTCCCTACTAACT+AGG - chr2_1:72828352-72828371 Msa0223280:intron 40.0%
GTGAGCTTAACCTAGTTAGT+AGG + chr2_1:72828365-72828384 None:intergenic 40.0%
CACATGCAGTCAACTTACTA+GGG + chr2_1:72828689-72828708 None:intergenic 40.0%
ACACATGCAGTCAACTTACT+AGG + chr2_1:72828690-72828709 None:intergenic 40.0%
! AGTAAGTTGACTGCATGTGT+TGG - chr2_1:72828690-72828709 Msa0223280:intron 40.0%
GGCAAATGGTCACGATTTAA+AGG - chr2_1:72828826-72828845 Msa0223280:intron 40.0%
AATCGCAAACACATCTCTAG+TGG - chr2_1:72828946-72828965 Msa0223280:intron 40.0%
CTTAGCATTAGTATTCAGGG+AGG - chr2_1:72829189-72829208 Msa0223280:CDS 40.0%
CAAACATCCAAGGGATTGAG+AGG + chr2_1:72827131-72827150 None:intergenic 45.0%
TGCTACAGCCATTGATGCTT+CGG - chr2_1:72827406-72827425 Msa0223280:CDS 45.0%
! CAATTGCTCCGAAGCATCAA+TGG + chr2_1:72827417-72827436 None:intergenic 45.0%
CATTGATGCTTCGGAGCAAT+TGG - chr2_1:72827415-72827434 Msa0223280:CDS 45.0%
CTCCCTTGGACAATATGACA+TGG - chr2_1:72827695-72827714 Msa0223280:intron 45.0%
! ACACTACAAAGTATCAGGGG+CGG - chr2_1:72827738-72827757 Msa0223280:intron 45.0%
TTGTCACATTTGCACGAAGC+TGG - chr2_1:72827918-72827937 Msa0223280:intron 45.0%
CTAACTAGGTTAAGCTCACG+AGG - chr2_1:72828366-72828385 Msa0223280:intron 45.0%
! GCCAAAACGAGTGACTAGTT+TGG - chr2_1:72828805-72828824 Msa0223280:intron 45.0%
! GCCAAACTAGTCACTCGTTT+TGG + chr2_1:72828809-72828828 None:intergenic 45.0%
!! CGAGTGACTAGTTTGGCAAA+TGG - chr2_1:72828812-72828831 Msa0223280:intron 45.0%
GAGAAAGAAGAAGCAGCTAG+CGG - chr2_1:72829295-72829314 Msa0223280:CDS 45.0%
!!! TTTACATTAAATATTTTTTT+TGG - chr2_1:72828286-72828305 Msa0223280:intron 5.0%
!! TATATATATATATATTCAAT+TGG + chr2_1:72828442-72828461 None:intergenic 5.0%
GCTGTAGCAGCAACAGGATT+TGG + chr2_1:72827374-72827393 None:intergenic 50.0%
TCAACAGCTGTAGCAGCAAC+AGG + chr2_1:72827380-72827399 None:intergenic 50.0%
AAGAGACACCCCATCATCAG+TGG + chr2_1:72827453-72827472 None:intergenic 50.0%
GCCCCTGATACTTTGTAGTG+TGG + chr2_1:72827739-72827758 None:intergenic 50.0%
GCACACTCTCACCAACACAT+AGG + chr2_1:72827765-72827784 None:intergenic 50.0%
CTTCTGCACCTTGCACTCAA+AGG - chr2_1:72827862-72827881 Msa0223280:intron 50.0%
TACTTTGCAGTGGCGTATCC+AGG + chr2_1:72828550-72828569 None:intergenic 50.0%
GTAGTAAGGGCAGGACCTAA+AGG - chr2_1:72829340-72829359 Msa0223280:CDS 50.0%
AGGGCAGGACCTAAAGGATT+TGG - chr2_1:72829346-72829365 Msa0223280:CDS 50.0%
! GGAGCATCCTCTCAATCCCT+TGG - chr2_1:72827121-72827140 Msa0223280:three_prime_UTR 55.0%
AGAGTGGGCCACGTCAGCAA+TGG - chr2_1:72827160-72827179 Msa0223280:three_prime_UTR 60.0%
TGCAGTGGCCATTGCTGACG+TGG + chr2_1:72827171-72827190 None:intergenic 60.0%
TCAGGGGCGGACCTATGTGT+TGG - chr2_1:72827751-72827770 Msa0223280:intron 60.0%
CAAGGTCCGGGGTTGAAACC+CGG + chr2_1:72828318-72828337 None:intergenic 60.0%
TATCCAGGACCCTGGGTCAG+GGG + chr2_1:72828535-72828554 None:intergenic 60.0%
GTATCCAGGACCCTGGGTCA+GGG + chr2_1:72828536-72828555 None:intergenic 60.0%
AGTGGCGTATCCAGGACCCT+GGG + chr2_1:72828542-72828561 None:intergenic 60.0%
TGGTGGCCGGGTTTCAACCC+CGG - chr2_1:72828309-72828328 Msa0223280:intron 65.0%
AACTTCGCACCCCCTGACCC+AGG - chr2_1:72828522-72828541 Msa0223280:intron 65.0%
ACTTCGCACCCCCTGACCCA+GGG - chr2_1:72828523-72828542 Msa0223280:intron 65.0%
ATCCAGGACCCTGGGTCAGG+GGG + chr2_1:72828534-72828553 None:intergenic 65.0%
CGTATCCAGGACCCTGGGTC+AGG + chr2_1:72828537-72828556 None:intergenic 65.0%
CAGTGGCGTATCCAGGACCC+TGG + chr2_1:72828543-72828562 None:intergenic 65.0%
CACCCCCTGACCCAGGGTCC+TGG - chr2_1:72828529-72828548 Msa0223280:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72827074 72829622 72827074 ID=Msa0223280;Name=Msa0223280
chr2_1 mRNA 72827074 72829622 72827074 ID=Msa0223280-mRNA-1;Parent=Msa0223280;Name=Msa0223280-mRNA-1;_AED=0.03;_eAED=0.03;_QI=105|1|1|1|1|1|2|220|170
chr2_1 exon 72827074 72827455 72827074 ID=Msa0223280-mRNA-1:exon:21153;Parent=Msa0223280-mRNA-1
chr2_1 exon 72829167 72829622 72829167 ID=Msa0223280-mRNA-1:exon:21152;Parent=Msa0223280-mRNA-1
chr2_1 five_prime_UTR 72829518 72829622 72829518 ID=Msa0223280-mRNA-1:five_prime_utr;Parent=Msa0223280-mRNA-1
chr2_1 CDS 72829167 72829517 72829167 ID=Msa0223280-mRNA-1:cds;Parent=Msa0223280-mRNA-1
chr2_1 CDS 72827294 72827455 72827294 ID=Msa0223280-mRNA-1:cds;Parent=Msa0223280-mRNA-1
chr2_1 three_prime_UTR 72827074 72827293 72827074 ID=Msa0223280-mRNA-1:three_prime_utr;Parent=Msa0223280-mRNA-1
Gene Sequence

>Msa0223280

ATGGCCACTGCATTATTTGCATCATCATCATCATCTCCAAAGATTGCAACCTTCCTTTCAACATCATCTTCTTCTTCTTTCCATTTCAACACACGTTTTTACTCACTTCCAACAACTTCTTCATCTTTCTCTCCCATTATCACTACTACAACCAGAAAATCCATATTTTTTCAAAGGAAGTCCAAACTATGGCCAAATCCTGTTGCTGCTACAGCTGTTGAAGATGCTGCTACAGCCATTGATGCTTCGGAGCAATTGGTTTCATCAACTACCACTGATGATGGGGTGTCTCTTATCGTATCAGCTCTTTTCTTCATTGCTTTCATTGGCTTATCCGTTATCACTATTGGGGTTATCTATTTAGCAGTAACAGATTTCTTGACAAAGAGAGAGAAGGAAAAATTTGAGAAAGAAGAAGCAGCTAGCGGAAAGAAGAAAAAGAAAAGAAAAGTAGTAAGGGCAGGACCTAAAGGATTTGGTCAAAAGATTGTTCAAACTGAAGATGATGATTGA

Protein sequence

>Msa0223280

MATALFASSSSSPKIATFLSTSSSSSFHFNTRFYSLPTTSSSFSPIITTTTRKSIFFQRKSKLWPNPVAATAVEDAATAIDASEQLVSSTTTDDGVSLIVSALFFIAFIGLSVITIGVIYLAVTDFLTKREKEKFEKEEAASGKKKKKRKVVRAGPKGFGQKIVQTEDDD*