AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259980 MtrunA17_Chr2g0328571 92.398 171 7 4 1 170 18 183 1.02e-80 237
Msa0259980 MtrunA17_Chr1g0185161 90.643 171 8 6 1 170 1 164 1.41e-77 228
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259980 AT2G29180.1 41.772 158 75 5 20 163 5 159 6.21e-24 92.4

Find 45 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTATCCGTTATCACTAT+TGG 0.245133 2_2:-57456053 Msa0259980:CDS
GCTTATCCGTTATCACTATT+GGG 0.260636 2_2:-57456052 Msa0259980:CDS
ATGCTCCTAGTCCTAAAATT+TGG 0.273314 2_2:+57456454 None:intergenic
TCTGGTTGTAGTAGTGATAA+TGG 0.300412 2_2:+57456247 None:intergenic
GAAAGGAAGGTTGCAATCTT+TGG 0.300675 2_2:+57456344 None:intergenic
GAATACAACTGAGAATTTAC+TGG 0.312917 2_2:-57454015 Msa0259980:three_prime_UTR
GCTGTAGCAGCAACAGGATT+TGG 0.334339 2_2:+57456188 None:intergenic
TTCAAAGGAAGTCCAAACTA+TGG 0.343791 2_2:-57456211 Msa0259980:CDS
CATTGATGCTTCGGAGCAAT+TGG 0.360695 2_2:-57456144 Msa0259980:CDS
TACTCAACTTGCTAAATCAT+AGG 0.367002 2_2:+57454085 None:intergenic
CTGGTTGTAGTAGTGATAAT+GGG 0.369858 2_2:+57456248 None:intergenic
AACAGGATTTGGCCATAGTT+TGG 0.372494 2_2:+57456199 None:intergenic
AAAAGAAAAGAAAAGTAGTA+AGG 0.384781 2_2:-57454225 Msa0259980:CDS
AGGGCAGGACCTAAAGGATT+TGG 0.404020 2_2:-57454205 Msa0259980:CDS
ACTGAAGATGATGATTGATT+AGG 0.408774 2_2:-57454166 Msa0259980:exon
GAGAAAGATGAAGAAGTTGT+TGG 0.423658 2_2:+57456272 None:intergenic
TGCTACAGCCATTGATGCTT+CGG 0.431580 2_2:-57456153 Msa0259980:CDS
TCAACAGCTGTAGCAGCAAC+AGG 0.437132 2_2:+57456182 None:intergenic
CAATTGCTCCGAAGCATCAA+TGG 0.447559 2_2:+57456145 None:intergenic
AGAAGATGATGTTGAAAGGA+AGG 0.478894 2_2:+57456331 None:intergenic
TCATCAACTACCACTGATGA+TGG 0.480753 2_2:-57456119 Msa0259980:CDS
AAAGAAAAGAAAAGTAGTAA+GGG 0.491413 2_2:-57454224 Msa0259980:CDS
AAGAAGAAGATGATGTTGAA+AGG 0.496918 2_2:+57456327 None:intergenic
ACTCAACTTGCTAAATCATA+GGG 0.503216 2_2:+57454086 None:intergenic
GTAGTAAGGGCAGGACCTAA+AGG 0.510055 2_2:-57454211 Msa0259980:CDS
GGAGCATCCTCTCAATCCCT+TGG 0.515120 2_2:-57456438 Msa0259980:five_prime_UTR
CTTATCCGTTATCACTATTG+GGG 0.525510 2_2:-57456051 Msa0259980:intron
CATCAACTACCACTGATGAT+GGG 0.525641 2_2:-57456118 Msa0259980:CDS
AAAAGAAAAGTAGTAAGGGC+AGG 0.536130 2_2:-57454220 Msa0259980:CDS
TACAACTTCTCAAACATCCA+AGG 0.540197 2_2:+57456421 None:intergenic
ATATACCCCAATAGTGATAA+CGG 0.550650 2_2:+57456046 None:intergenic
TTTCTTGACAAAGAGAGAGA+AGG 0.571247 2_2:-57454287 Msa0259980:CDS
CTAAATCATAGGGGAAAACA+AGG 0.571574 2_2:+57454096 None:intergenic
CAAACATCCAAGGGATTGAG+AGG 0.581083 2_2:+57456431 None:intergenic
TGCAGTGGCCATTGCTGACG+TGG 0.589554 2_2:+57456391 None:intergenic
AGAGTGGGCCACGTCAGCAA+TGG 0.607603 2_2:-57456399 Msa0259980:exon
ATCAACTACCACTGATGATG+GGG 0.608198 2_2:-57456117 Msa0259980:CDS
ACAACTTCTCAAACATCCAA+GGG 0.612691 2_2:+57456422 None:intergenic
AAGAGACACCCCATCATCAG+TGG 0.647668 2_2:+57456109 None:intergenic
TGTTTGAGAAGTTGTAGAGT+GGG 0.649491 2_2:-57456414 Msa0259980:five_prime_UTR
ATGTTTGAGAAGTTGTAGAG+TGG 0.651403 2_2:-57456415 Msa0259980:five_prime_UTR
CTCAACTTGCTAAATCATAG+GGG 0.661129 2_2:+57454087 None:intergenic
GAGAAAGAAGAAGCAGCTAG+CGG 0.687353 2_2:-57454256 Msa0259980:CDS
ATAATGAATAACAATGTGTG+TGG 0.699753 2_2:+57453988 None:intergenic
TGATGATGCAAATAATGCAG+TGG 0.718262 2_2:+57456376 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTCTATATTAATAAAAGAAT+TGG + chr2_2:57454450-57454469 None:intergenic 15.0%
!!! CAATTCTTTTATTAATATAG+AGG - chr2_2:57454448-57454467 Msa0259980:intron 15.0%
!!! TTTGAAATATTCATAAAGTA+GGG + chr2_2:57455067-57455086 None:intergenic 15.0%
!!! TTTTGAAATATTCATAAAGT+AGG + chr2_2:57455068-57455087 None:intergenic 15.0%
!!! CATTAAATATTTTTTTTTGG+TGG - chr2_2:57455168-57455187 Msa0259980:intron 15.0%
!!! AAATGATTATGAACTAATTT+TGG + chr2_2:57455608-57455627 None:intergenic 15.0%
!! TATTCAAAATGAACTAATTA+GGG + chr2_2:57455635-57455654 None:intergenic 15.0%
!!! AATAGAATTTTACAATATTG+AGG - chr2_2:57455651-57455670 Msa0259980:intron 15.0%
!!! TTTTTCGTTTTGTAATTTTA+TGG - chr2_2:57455855-57455874 Msa0259980:intron 15.0%
!!! TTTTATAAATGTAAATGACT+CGG - chr2_2:57455997-57456016 Msa0259980:intron 15.0%
!!! TTGAAAAAATATGGATTTTC+TGG + chr2_2:57454210-57454229 None:intergenic 20.0%
!!! GAAAATCCATATTTTTTCAA+AGG - chr2_2:57454210-57454229 Msa0259980:CDS 20.0%
!!! TTTAAAACTTAATAGAGTCA+TGG + chr2_2:57455095-57455114 None:intergenic 20.0%
!! TATATAATCAGGAACTAATT+TGG - chr2_2:57455138-57455157 Msa0259980:intron 20.0%
!!! TAAATATTTTTTTTTGGTGG+TGG - chr2_2:57455171-57455190 Msa0259980:intron 20.0%
!!! TTATTGACATTACATGTTTT+AGG - chr2_2:57455467-57455486 Msa0259980:intron 20.0%
!!! TATTGACATTACATGTTTTA+GGG - chr2_2:57455468-57455487 Msa0259980:intron 20.0%
!! CTAAATTGATTATGAAAGTT+AGG + chr2_2:57455549-57455568 None:intergenic 20.0%
!! CTATTCAAAATGAACTAATT+AGG + chr2_2:57455636-57455655 None:intergenic 20.0%
!!! TTGCGATTTTAATACATTAA+GGG + chr2_2:57455819-57455838 None:intergenic 20.0%
!!! TTTGCGATTTTAATACATTA+AGG + chr2_2:57455820-57455839 None:intergenic 20.0%
!! AAAAGAAAAGAAAAGTAGTA+AGG - chr2_2:57456211-57456230 Msa0259980:CDS 20.0%
!! AAAGAAAAGAAAAGTAGTAA+GGG - chr2_2:57456212-57456231 Msa0259980:CDS 20.0%
! TAGAGAAAAAAGTAGGATAT+TGG + chr2_2:57454696-57454715 None:intergenic 25.0%
! TGCAAAATAGAGAAAAAAGT+AGG + chr2_2:57454703-57454722 None:intergenic 25.0%
! GAAACATAAATCACTCAAAT+TGG + chr2_2:57454851-57454870 None:intergenic 25.0%
! TTATATAGAGTGGTTAGATA+TGG + chr2_2:57455125-57455144 None:intergenic 25.0%
! GCATAATCATAATATATGCA+AGG + chr2_2:57455216-57455235 None:intergenic 25.0%
!! TTTTGATCTTTGAATATGTG+AGG + chr2_2:57455963-57455982 None:intergenic 25.0%
! TTACTTAGCATTAGTATTCA+GGG - chr2_2:57456071-57456090 Msa0259980:CDS 25.0%
! ATAATGAATAACAATGTGTG+TGG + chr2_2:57456451-57456470 None:intergenic 25.0%
! GTAGCTCATAACCAAATTTT+AGG - chr2_2:57453971-57453990 Msa0259980:three_prime_UTR 30.0%
!!! CATAACCAAATTTTAGGACT+AGG - chr2_2:57453977-57453996 Msa0259980:three_prime_UTR 30.0%
AAGAAGAAGATGATGTTGAA+AGG + chr2_2:57454112-57454131 None:intergenic 30.0%
AGTAAAAACGTGTGTTGAAA+TGG + chr2_2:57454139-57454158 None:intergenic 30.0%
! GGACTTCCTTTGAAAAAATA+TGG + chr2_2:57454219-57454238 None:intergenic 30.0%
! CTTTTCTTCATTGCTTTCAT+TGG - chr2_2:57454362-57454381 Msa0259980:intron 30.0%
ATATACCCCAATAGTGATAA+CGG + chr2_2:57454393-57454412 None:intergenic 30.0%
TTAGTGAAAATTATCTCCCT+TGG - chr2_2:57454558-57454577 Msa0259980:intron 30.0%
AGGATATTGGTGTAATTGTT+AGG + chr2_2:57454683-57454702 None:intergenic 30.0%
ATTATGATCAATCTCTACGA+CGG + chr2_2:57454933-57454952 None:intergenic 30.0%
!! AAGAGTGTTCTACAAAGTTA+TGG + chr2_2:57455036-57455055 None:intergenic 30.0%
TCTAACCACTCTATATAATC+AGG - chr2_2:57455127-57455146 Msa0259980:intron 30.0%
TAGTTCCTGATTATATAGAG+TGG + chr2_2:57455135-57455154 None:intergenic 30.0%
ATAATCAGGAACTAATTTGG+AGG - chr2_2:57455141-57455160 Msa0259980:intron 30.0%
ATCATAATATATGCAAGGTC+CGG + chr2_2:57455211-57455230 None:intergenic 30.0%
! AACTAGTTTATACTTTGCAG+TGG + chr2_2:57455444-57455463 None:intergenic 30.0%
! TTTAAAGCAAACAGCCATTT+AGG - chr2_2:57455761-57455780 Msa0259980:intron 30.0%
CACATATTTAGAGACCTAAA+TGG + chr2_2:57455778-57455797 None:intergenic 30.0%
TTTAGGTCTCTAAATATGTG+AGG - chr2_2:57455778-57455797 Msa0259980:intron 30.0%
! CCTCCTATCTAAAACTATTT+CGG - chr2_2:57456046-57456065 Msa0259980:intron 30.0%
!!! ACACCGAAATAGTTTTAGAT+AGG + chr2_2:57456052-57456071 None:intergenic 30.0%
GTTACTTAGCATTAGTATTC+AGG - chr2_2:57456070-57456089 Msa0259980:CDS 30.0%
!! TTTTTGTTTGTTTGTGTTGC+AGG - chr2_2:57456104-57456123 Msa0259980:CDS 30.0%
! ATCTTTTGACCAAATCCTTT+AGG + chr2_2:57456243-57456262 None:intergenic 30.0%
ACTGAAGATGATGATTGATT+AGG - chr2_2:57456270-57456289 Msa0259980:CDS 30.0%
!! ACTCAACTTGCTAAATCATA+GGG + chr2_2:57456353-57456372 None:intergenic 30.0%
!! TACTCAACTTGCTAAATCAT+AGG + chr2_2:57456354-57456373 None:intergenic 30.0%
!! GTTTTAACAAAGAGAAGCAA+GGG - chr2_2:57456385-57456404 Msa0259980:exon 30.0%
GAATACAACTGAGAATTTAC+TGG - chr2_2:57456421-57456440 Msa0259980:five_prime_UTR 30.0%
ATGCTCCTAGTCCTAAAATT+TGG + chr2_2:57453985-57454004 None:intergenic 35.0%
ACAACTTCTCAAACATCCAA+GGG + chr2_2:57454017-57454036 None:intergenic 35.0%
TACAACTTCTCAAACATCCA+AGG + chr2_2:57454018-57454037 None:intergenic 35.0%
ATGTTTGAGAAGTTGTAGAG+TGG - chr2_2:57454021-57454040 Msa0259980:three_prime_UTR 35.0%
TGTTTGAGAAGTTGTAGAGT+GGG - chr2_2:57454022-57454041 Msa0259980:three_prime_UTR 35.0%
! TGATGATGCAAATAATGCAG+TGG + chr2_2:57454063-57454082 None:intergenic 35.0%
AGAAGATGATGTTGAAAGGA+AGG + chr2_2:57454108-57454127 None:intergenic 35.0%
GAGAAAGATGAAGAAGTTGT+TGG + chr2_2:57454167-57454186 None:intergenic 35.0%
CTGGTTGTAGTAGTGATAAT+GGG + chr2_2:57454191-57454210 None:intergenic 35.0%
TCTGGTTGTAGTAGTGATAA+TGG + chr2_2:57454192-57454211 None:intergenic 35.0%
TTCAAAGGAAGTCCAAACTA+TGG - chr2_2:57454225-57454244 Msa0259980:CDS 35.0%
GCTTATCCGTTATCACTATT+GGG - chr2_2:57454384-57454403 Msa0259980:intron 35.0%
CTTATCCGTTATCACTATTG+GGG - chr2_2:57454385-57454404 Msa0259980:intron 35.0%
TTGAGACATGCTTGCAATTT+CGG + chr2_2:57454485-57454504 None:intergenic 35.0%
TTCCATGTCATATTGTCCAA+GGG + chr2_2:57454577-57454596 None:intergenic 35.0%
ATTCCATGTCATATTGTCCA+AGG + chr2_2:57454578-57454597 None:intergenic 35.0%
! TTACCACACTACAAAGTATC+AGG - chr2_2:57454610-57454629 Msa0259980:intron 35.0%
! TACCACACTACAAAGTATCA+GGG - chr2_2:57454611-57454630 Msa0259980:intron 35.0%
GTGTAATTGTTAGGAACTCA+GGG + chr2_2:57454674-57454693 None:intergenic 35.0%
GTGCAGAAGTTAATTATCCA+GGG + chr2_2:57454728-57454747 None:intergenic 35.0%
!!! TATTTTTTTTTGGTGGTGGC+CGG - chr2_2:57455175-57455194 Msa0259980:intron 35.0%
TCATAATATATGCAAGGTCC+GGG + chr2_2:57455210-57455229 None:intergenic 35.0%
TGAGCTTAACCTAGTTAGTA+GGG + chr2_2:57455244-57455263 None:intergenic 35.0%
!!! CCGAAATAGTTTTAGATAGG+AGG + chr2_2:57456049-57456068 None:intergenic 35.0%
TTTCTTGACAAAGAGAGAGA+AGG - chr2_2:57456149-57456168 Msa0259980:CDS 35.0%
AAAAGAAAAGTAGTAAGGGC+AGG - chr2_2:57456216-57456235 Msa0259980:CDS 35.0%
CTAAATCATAGGGGAAAACA+AGG + chr2_2:57456343-57456362 None:intergenic 35.0%
!! CTCAACTTGCTAAATCATAG+GGG + chr2_2:57456352-57456371 None:intergenic 35.0%
!! CGTTTTAACAAAGAGAAGCA+AGG - chr2_2:57456384-57456403 Msa0259980:exon 35.0%
GAAAGGAAGGTTGCAATCTT+TGG + chr2_2:57454095-57454114 None:intergenic 40.0%
AACAGGATTTGGCCATAGTT+TGG + chr2_2:57454240-57454259 None:intergenic 40.0%
TCATCAACTACCACTGATGA+TGG - chr2_2:57454317-57454336 Msa0259980:intron 40.0%
CATCAACTACCACTGATGAT+GGG - chr2_2:57454318-57454337 Msa0259980:intron 40.0%
! ATCAACTACCACTGATGATG+GGG - chr2_2:57454319-57454338 Msa0259980:intron 40.0%
GGCTTATCCGTTATCACTAT+TGG - chr2_2:57454383-57454402 Msa0259980:intron 40.0%
! ACCACACTACAAAGTATCAG+GGG - chr2_2:57454612-57454631 Msa0259980:intron 40.0%
GGTGTAATTGTTAGGAACTC+AGG + chr2_2:57454675-57454694 None:intergenic 40.0%
! TTTCTCTATTTTGCACACCC+TGG - chr2_2:57454708-57454727 Msa0259980:intron 40.0%
GGTGCAGAAGTTAATTATCC+AGG + chr2_2:57454729-57454748 None:intergenic 40.0%
AATGTCATCCTTTGAGTGCA+AGG + chr2_2:57454750-57454769 None:intergenic 40.0%
TGGTCAAACAAGATGCAAGT+TGG + chr2_2:57454831-57454850 None:intergenic 40.0%
!!! ATTTTTTTTTGGTGGTGGCC+GGG - chr2_2:57455176-57455195 Msa0259980:intron 40.0%
CATAATATATGCAAGGTCCG+GGG + chr2_2:57455209-57455228 None:intergenic 40.0%
ATGCATTGTCCCTACTAACT+AGG - chr2_2:57455232-57455251 Msa0259980:intron 40.0%
GTGAGCTTAACCTAGTTAGT+AGG + chr2_2:57455245-57455264 None:intergenic 40.0%
CACATGCAGTCAACTTACTA+GGG + chr2_2:57455573-57455592 None:intergenic 40.0%
ACACATGCAGTCAACTTACT+AGG + chr2_2:57455574-57455593 None:intergenic 40.0%
! AGTAAGTTGACTGCATGTGT+TGG - chr2_2:57455574-57455593 Msa0259980:intron 40.0%
GGCAAATGGTCACGATTTAA+AGG - chr2_2:57455711-57455730 Msa0259980:intron 40.0%
AATCGCAAACACATCTCTAG+TGG - chr2_2:57455831-57455850 Msa0259980:intron 40.0%
CTTAGCATTAGTATTCAGGG+AGG - chr2_2:57456074-57456093 Msa0259980:CDS 40.0%
CAAACATCCAAGGGATTGAG+AGG + chr2_2:57454008-57454027 None:intergenic 45.0%
TGCTACAGCCATTGATGCTT+CGG - chr2_2:57454283-57454302 Msa0259980:CDS 45.0%
! CAATTGCTCCGAAGCATCAA+TGG + chr2_2:57454294-57454313 None:intergenic 45.0%
CATTGATGCTTCGGAGCAAT+TGG - chr2_2:57454292-57454311 Msa0259980:CDS 45.0%
CTCCCTTGGACAATATGACA+TGG - chr2_2:57454572-57454591 Msa0259980:intron 45.0%
! ACACTACAAAGTATCAGGGG+CGG - chr2_2:57454615-57454634 Msa0259980:intron 45.0%
TTGTCACATTTGCACGAAGC+TGG - chr2_2:57454795-57454814 Msa0259980:intron 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+GGG - chr2_2:57455177-57455196 Msa0259980:intron 45.0%
CTAACTAGGTTAAGCTCACG+AGG - chr2_2:57455246-57455265 Msa0259980:intron 45.0%
! GCCAAAACGAGTGACTAGTT+TGG - chr2_2:57455690-57455709 Msa0259980:intron 45.0%
! GCCAAACTAGTCACTCGTTT+TGG + chr2_2:57455694-57455713 None:intergenic 45.0%
!! CGAGTGACTAGTTTGGCAAA+TGG - chr2_2:57455697-57455716 Msa0259980:intron 45.0%
GAGAAAGAAGAAGCAGCTAG+CGG - chr2_2:57456180-57456199 Msa0259980:CDS 45.0%
!! ACTATTAAATTAAATTAAAT+TGG + chr2_2:57454873-57454892 None:intergenic 5.0%
!!! TTACATTAAATATTTTTTTT+TGG - chr2_2:57455165-57455184 Msa0259980:intron 5.0%
!! TATATATATATATATTCAAT+TGG + chr2_2:57455322-57455341 None:intergenic 5.0%
GCTGTAGCAGCAACAGGATT+TGG + chr2_2:57454251-57454270 None:intergenic 50.0%
TCAACAGCTGTAGCAGCAAC+AGG + chr2_2:57454257-57454276 None:intergenic 50.0%
AAGAGACACCCCATCATCAG+TGG + chr2_2:57454330-57454349 None:intergenic 50.0%
GCCCCTGATACTTTGTAGTG+TGG + chr2_2:57454616-57454635 None:intergenic 50.0%
GCACACTCTCACCAACACAT+AGG + chr2_2:57454642-57454661 None:intergenic 50.0%
CTTCTGCACCTTGCACTCAA+AGG - chr2_2:57454739-57454758 Msa0259980:intron 50.0%
TACTTTGCAGTGGCGTATCC+AGG + chr2_2:57455434-57455453 None:intergenic 50.0%
GTAGTAAGGGCAGGACCTAA+AGG - chr2_2:57456225-57456244 Msa0259980:CDS 50.0%
AGGGCAGGACCTAAAGGATT+TGG - chr2_2:57456231-57456250 Msa0259980:CDS 50.0%
! GGAGCATCCTCTCAATCCCT+TGG - chr2_2:57453998-57454017 Msa0259980:three_prime_UTR 55.0%
AGAGTGGGCCACGTCAGCAA+TGG - chr2_2:57454037-57454056 Msa0259980:three_prime_UTR 60.0%
TGCAGTGGCCATTGCTGACG+TGG + chr2_2:57454048-57454067 None:intergenic 60.0%
TCAGGGGCGGACCTATGTGT+TGG - chr2_2:57454628-57454647 Msa0259980:intron 60.0%
AAGGTCCGGGGTTGAAACCC+CGG + chr2_2:57455197-57455216 None:intergenic 60.0%
TATCCAGGACCCTGGGTCAG+GGG + chr2_2:57455419-57455438 None:intergenic 60.0%
GTATCCAGGACCCTGGGTCA+GGG + chr2_2:57455420-57455439 None:intergenic 60.0%
AGTGGCGTATCCAGGACCCT+GGG + chr2_2:57455426-57455445 None:intergenic 60.0%
AACTTCGCACCCCCTGACCC+AGG - chr2_2:57455406-57455425 Msa0259980:intron 65.0%
ACTTCGCACCCCCTGACCCA+GGG - chr2_2:57455407-57455426 Msa0259980:intron 65.0%
ATCCAGGACCCTGGGTCAGG+GGG + chr2_2:57455418-57455437 None:intergenic 65.0%
CGTATCCAGGACCCTGGGTC+AGG + chr2_2:57455421-57455440 None:intergenic 65.0%
CAGTGGCGTATCCAGGACCC+TGG + chr2_2:57455427-57455446 None:intergenic 65.0%
GGTGGCCGGGGTTTCAACCC+CGG - chr2_2:57455189-57455208 Msa0259980:intron 70.0%
CACCCCCTGACCCAGGGTCC+TGG - chr2_2:57455413-57455432 Msa0259980:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 57453951 57456507 57453951 ID=Msa0259980;Name=Msa0259980
chr2_2 mRNA 57453951 57456507 57453951 ID=Msa0259980-mRNA-1;Parent=Msa0259980;Name=Msa0259980-mRNA-1;_AED=0.03;_eAED=0.03;_QI=105|1|1|1|1|1|2|220|170
chr2_2 exon 57453951 57454332 57453951 ID=Msa0259980-mRNA-1:exon:17452;Parent=Msa0259980-mRNA-1
chr2_2 exon 57456052 57456507 57456052 ID=Msa0259980-mRNA-1:exon:17451;Parent=Msa0259980-mRNA-1
chr2_2 five_prime_UTR 57456403 57456507 57456403 ID=Msa0259980-mRNA-1:five_prime_utr;Parent=Msa0259980-mRNA-1
chr2_2 CDS 57456052 57456402 57456052 ID=Msa0259980-mRNA-1:cds;Parent=Msa0259980-mRNA-1
chr2_2 CDS 57454171 57454332 57454171 ID=Msa0259980-mRNA-1:cds;Parent=Msa0259980-mRNA-1
chr2_2 three_prime_UTR 57453951 57454170 57453951 ID=Msa0259980-mRNA-1:three_prime_utr;Parent=Msa0259980-mRNA-1
Gene Sequence

>Msa0259980

ATGGCCACTGCATTATTTGCATCATCATCATCATCTCCAAAGATTGCAACCTTCCTTTCAACATCATCTTCTTCTTCTTTCCATTTCAACACACGTTTTTACTCACTTCCAACAACTTCTTCATCTTTCTCTCCCATTATCACTACTACAACCAGAAAATCCATATTTTTTCAAAGGAAGTCCAAACTATGGCCAAATCCTGTTGCTGCTACAGCTGTTGAAGATGCTGCTACAGCCATTGATGCTTCGGAGCAATTGGTTTCATCAACTACCACTGATGATGGGGTGTCTCTTATCGTATCAGCTCTTTTCTTCATTGCTTTCATTGGCTTATCCGTTATCACTATTGGGGTTATCTATTTAGCAGTAACAGATTTCTTGACAAAGAGAGAGAAGGAAAAATTTGAGAAAGAAGAAGCAGCTAGCGGAAAGAAGAAAAAGAAAAGAAAAGTAGTAAGGGCAGGACCTAAAGGATTTGGTCAAAAGATTGTTCAAACTGAAGATGATGATTGA

Protein sequence

>Msa0259980

MATALFASSSSSPKIATFLSTSSSSSFHFNTRFYSLPTTSSSFSPIITTTTRKSIFFQRKSKLWPNPVAATAVEDAATAIDASEQLVSSTTTDDGVSLIVSALFFIAFIGLSVITIGVIYLAVTDFLTKREKEKFEKEEAASGKKKKKRKVVRAGPKGFGQKIVQTEDDD*