Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0201070 | XP_003594885.1 | 95.238 | 252 | 1 | 1 | 1 | 252 | 1 | 241 | 2.90e-175 | 493 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0201070 | sp|Q9ZV56|CCT1_ARATH | 79.253 | 241 | 34 | 3 | 13 | 252 | 32 | 257 | 5.22e-140 | 399 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0201070 | G7INF3 | 95.238 | 252 | 1 | 1 | 1 | 252 | 1 | 241 | 1.39e-175 | 493 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000550 | Msa0201070 | -0.812226 | 4.715636e-51 | -8.615850e-47 |
Msa0006390 | Msa0201070 | 0.801327 | 9.487997e-49 | -8.615850e-47 |
Msa0006400 | Msa0201070 | 0.804953 | 1.686723e-49 | -8.615850e-47 |
Msa0009420 | Msa0201070 | 0.815014 | 1.148310e-51 | -8.615850e-47 |
Msa0011170 | Msa0201070 | 0.800008 | 1.763112e-48 | -8.615850e-47 |
Msa0014710 | Msa0201070 | 0.822800 | 1.951057e-53 | -8.615850e-47 |
Msa0015390 | Msa0201070 | 0.819123 | 1.369976e-52 | -8.615850e-47 |
Msa0017070 | Msa0201070 | 0.806994 | 6.277745e-50 | -8.615850e-47 |
Msa0017510 | Msa0201070 | 0.824890 | 6.318010e-54 | -8.615850e-47 |
Msa0023840 | Msa0201070 | -0.806236 | 9.073228e-50 | -8.615850e-47 |
Msa0029850 | Msa0201070 | 0.806030 | 1.002679e-49 | -8.615850e-47 |
Msa0036920 | Msa0201070 | 0.810857 | 9.355436e-51 | -8.615850e-47 |
Msa0048000 | Msa0201070 | 0.810823 | 9.515319e-51 | -8.615850e-47 |
Msa0050370 | Msa0201070 | 0.822642 | 2.123295e-53 | -8.615850e-47 |
Msa0064970 | Msa0201070 | 0.801617 | 8.273851e-49 | -8.615850e-47 |
Msa0075880 | Msa0201070 | 0.816834 | 4.506917e-52 | -8.615850e-47 |
Msa0090100 | Msa0201070 | 0.821734 | 3.449300e-53 | -8.615850e-47 |
Msa0095560 | Msa0201070 | 0.811746 | 5.999307e-51 | -8.615850e-47 |
Msa0096450 | Msa0201070 | 0.804897 | 1.732775e-49 | -8.615850e-47 |
Msa0105070 | Msa0201070 | 0.813254 | 2.809028e-51 | -8.615850e-47 |
Msa0109900 | Msa0201070 | 0.813997 | 1.927814e-51 | -8.615850e-47 |
Msa0115810 | Msa0201070 | 0.804035 | 2.620733e-49 | -8.615850e-47 |
Msa0117710 | Msa0201070 | 0.842700 | 2.203067e-58 | -8.615850e-47 |
Msa0117770 | Msa0201070 | 0.825211 | 5.304272e-54 | -8.615850e-47 |
Msa0122590 | Msa0201070 | 0.837111 | 6.304274e-57 | -8.615850e-47 |
Msa0130970 | Msa0201070 | 0.807893 | 4.047162e-50 | -8.615850e-47 |
Msa0131770 | Msa0201070 | 0.809769 | 1.606443e-50 | -8.615850e-47 |
Msa0140390 | Msa0201070 | 0.803647 | 3.155077e-49 | -8.615850e-47 |
Msa0143560 | Msa0201070 | 0.800230 | 1.588832e-48 | -8.615850e-47 |
Msa0157290 | Msa0201070 | 0.824396 | 8.256065e-54 | -8.615850e-47 |
Msa0166870 | Msa0201070 | 0.819269 | 1.268970e-52 | -8.615850e-47 |
Msa0169820 | Msa0201070 | 0.804914 | 1.718517e-49 | -8.615850e-47 |
Msa0170140 | Msa0201070 | 0.820145 | 8.008226e-53 | -8.615850e-47 |
Msa0178930 | Msa0201070 | 0.814824 | 1.265511e-51 | -8.615850e-47 |
Msa0188460 | Msa0201070 | 0.809158 | 2.172929e-50 | -8.615850e-47 |
Msa0188830 | Msa0201070 | 0.845342 | 4.310350e-59 | -8.615850e-47 |
Msa0191250 | Msa0201070 | 0.806286 | 8.854198e-50 | -8.615850e-47 |
Msa0195770 | Msa0201070 | 0.824336 | 8.530017e-54 | -8.615850e-47 |
Msa0201070 | Msa0206790 | 0.815230 | 1.028128e-51 | -8.615850e-47 |
Msa0201070 | Msa0210450 | 0.830442 | 2.930570e-55 | -8.615850e-47 |
Msa0201070 | Msa0215320 | -0.827380 | 1.615272e-54 | -8.615850e-47 |
Msa0201070 | Msa0217400 | 0.816697 | 4.839256e-52 | -8.615850e-47 |
Msa0201070 | Msa0220580 | 0.830334 | 3.114608e-55 | -8.615850e-47 |
Msa0201070 | Msa0220740 | 0.848747 | 5.033649e-60 | -8.615850e-47 |
Msa0201070 | Msa0221060 | 0.818400 | 1.999565e-52 | -8.615850e-47 |
Msa0201070 | Msa0223410 | -0.815246 | 1.019695e-51 | -8.615850e-47 |
Msa0201070 | Msa0225520 | 0.805896 | 1.069709e-49 | -8.615850e-47 |
Msa0201070 | Msa0226250 | 0.810975 | 8.820334e-51 | -8.615850e-47 |
Msa0201070 | Msa0226890 | 0.808651 | 2.789583e-50 | -8.615850e-47 |
Msa0201070 | Msa0233300 | 0.818239 | 2.174944e-52 | -8.615850e-47 |
Msa0201070 | Msa0237310 | 0.817995 | 2.469576e-52 | -8.615850e-47 |
Msa0201070 | Msa0237750 | 0.826788 | 2.237836e-54 | -8.615850e-47 |
Msa0201070 | Msa0243710 | 0.885043 | 1.142118e-71 | -8.615850e-47 |
Msa0201070 | Msa0249560 | 0.801103 | 1.054310e-48 | -8.615850e-47 |
Msa0201070 | Msa0258760 | 0.846980 | 1.544675e-59 | -8.615850e-47 |
Msa0201070 | Msa0260810 | 0.819306 | 1.244890e-52 | -8.615850e-47 |
Msa0201070 | Msa0262520 | 0.834412 | 3.042289e-56 | -8.615850e-47 |
Msa0201070 | Msa0266000 | -0.836657 | 8.228679e-57 | -8.615850e-47 |
Msa0201070 | Msa0270100 | 0.827459 | 1.546034e-54 | -8.615850e-47 |
Msa0201070 | Msa0274730 | 0.821724 | 3.467858e-53 | -8.615850e-47 |
Msa0201070 | Msa0279160 | 0.804248 | 2.366716e-49 | -8.615850e-47 |
Msa0201070 | Msa0281640 | 0.809770 | 1.605299e-50 | -8.615850e-47 |
Msa0201070 | Msa0283450 | 0.804779 | 1.833980e-49 | -8.615850e-47 |
Msa0201070 | Msa0284520 | 0.817472 | 3.240044e-52 | -8.615850e-47 |
Msa0201070 | Msa0285450 | 0.818986 | 1.472109e-52 | -8.615850e-47 |
Msa0201070 | Msa0288100 | 0.836032 | 1.187014e-56 | -8.615850e-47 |
Msa0201070 | Msa0292930 | 0.804267 | 2.344494e-49 | -8.615850e-47 |
Msa0201070 | Msa0294950 | 0.822511 | 2.277547e-53 | -8.615850e-47 |
Msa0201070 | Msa0294960 | 0.800815 | 1.207132e-48 | -8.615850e-47 |
Msa0201070 | Msa0296560 | 0.811326 | 7.402384e-51 | -8.615850e-47 |
Msa0201070 | Msa0297960 | 0.804362 | 2.240647e-49 | -8.615850e-47 |
Msa0201070 | Msa0305700 | 0.800445 | 1.436797e-48 | -8.615850e-47 |
Msa0201070 | Msa0306210 | -0.805260 | 1.454416e-49 | -8.615850e-47 |
Msa0201070 | Msa0315290 | 0.807324 | 5.342619e-50 | -8.615850e-47 |
Msa0201070 | Msa0315530 | 0.815663 | 8.235918e-52 | -8.615850e-47 |
Msa0201070 | Msa0323080 | 0.818061 | 2.385220e-52 | -8.615850e-47 |
Msa0201070 | Msa0323620 | 0.819181 | 1.328862e-52 | -8.615850e-47 |
Msa0201070 | Msa0326520 | 0.830287 | 3.196324e-55 | -8.615850e-47 |
Msa0201070 | Msa0328550 | 0.802015 | 6.856434e-49 | -8.615850e-47 |
Msa0201070 | Msa0331920 | 0.819305 | 1.245262e-52 | -8.615850e-47 |
Msa0201070 | Msa0333720 | -0.811789 | 5.871950e-51 | -8.615850e-47 |
Msa0201070 | Msa0335040 | 0.809937 | 1.478154e-50 | -8.615850e-47 |
Msa0201070 | Msa0338110 | 0.838584 | 2.636664e-57 | -8.615850e-47 |
Msa0201070 | Msa0340450 | 0.808948 | 2.409712e-50 | -8.615850e-47 |
Msa0201070 | Msa0344690 | -0.817160 | 3.809285e-52 | -8.615850e-47 |
Msa0201070 | Msa0344830 | 0.820746 | 5.827624e-53 | -8.615850e-47 |
Msa0201070 | Msa0346180 | 0.813934 | 1.991076e-51 | -8.615850e-47 |
Msa0201070 | Msa0350870 | 0.821311 | 4.319800e-53 | -8.615850e-47 |
Msa0201070 | Msa0355220 | 0.809418 | 1.911197e-50 | -8.615850e-47 |
Msa0201070 | Msa0357340 | 0.806834 | 6.786218e-50 | -8.615850e-47 |
Msa0201070 | Msa0362450 | 0.858925 | 5.892717e-63 | -8.615850e-47 |
Msa0201070 | Msa0363890 | 0.830723 | 2.501453e-55 | -8.615850e-47 |
Msa0201070 | Msa0366970 | 0.816634 | 4.998547e-52 | -8.615850e-47 |
Msa0201070 | Msa0373930 | 0.813993 | 1.931517e-51 | -8.615850e-47 |
Msa0201070 | Msa0376590 | 0.848381 | 6.356373e-60 | -8.615850e-47 |
Msa0201070 | Msa0379640 | 0.804534 | 2.063319e-49 | -8.615850e-47 |
Msa0201070 | Msa0381600 | -0.802662 | 5.044138e-49 | -8.615850e-47 |
Msa0201070 | Msa0388960 | 0.821022 | 5.034441e-53 | -8.615850e-47 |
Msa0201070 | Msa0389340 | 0.825108 | 5.611261e-54 | -8.615850e-47 |
Msa0201070 | Msa0392180 | 0.803432 | 3.496615e-49 | -8.615850e-47 |
Msa0201070 | Msa0394260 | 0.809665 | 1.691581e-50 | -8.615850e-47 |
Msa0201070 | Msa0397750 | 0.819284 | 1.259057e-52 | -8.615850e-47 |
Msa0201070 | Msa0402290 | 0.823865 | 1.100087e-53 | -8.615850e-47 |
Msa0201070 | Msa0414230 | 0.805147 | 1.535816e-49 | -8.615850e-47 |
Msa0201070 | Msa0417100 | 0.814965 | 1.177815e-51 | -8.615850e-47 |
Msa0201070 | Msa0417270 | 0.802142 | 6.455710e-49 | -8.615850e-47 |
Msa0201070 | Msa0426640 | 0.809770 | 1.605299e-50 | -8.615850e-47 |
Msa0201070 | Msa0426900 | 0.804364 | 2.238737e-49 | -8.615850e-47 |
Msa0201070 | Msa0433410 | -0.816202 | 6.243402e-52 | -8.615850e-47 |
Msa0201070 | Msa0436370 | 0.820988 | 5.126024e-53 | -8.615850e-47 |
Msa0201070 | Msa0439970 | 0.814770 | 1.300509e-51 | -8.615850e-47 |
Msa0201070 | Msa0442850 | 0.816632 | 5.002472e-52 | -8.615850e-47 |
Msa0201070 | Msa0443260 | 0.827619 | 1.415632e-54 | -8.615850e-47 |
Msa0201070 | Msa0455670 | 0.814957 | 1.182466e-51 | -8.615850e-47 |
Msa0201070 | Msa0465680 | -0.821215 | 4.545200e-53 | -8.615850e-47 |
Msa0201070 | Msa0469160 | 0.818848 | 1.582068e-52 | -8.615850e-47 |
Msa0201070 | Msa0469940 | -0.825083 | 5.687679e-54 | -8.615850e-47 |
Msa0201070 | Msa0475490 | 0.812268 | 4.618168e-51 | -8.615850e-47 |
Msa0201070 | Msa0476110 | 0.833409 | 5.422196e-56 | -8.615850e-47 |
Msa0201070 | Msa0477130 | -0.804622 | 1.977767e-49 | -8.615850e-47 |
Msa0201070 | Msa0478920 | 0.807744 | 4.353095e-50 | -8.615850e-47 |
Msa0201070 | Msa0480980 | 0.805649 | 1.205335e-49 | -8.615850e-47 |
Msa0201070 | Msa0483150 | 0.809960 | 1.461347e-50 | -8.615850e-47 |
Msa0201070 | Msa0484780 | 0.833752 | 4.451411e-56 | -8.615850e-47 |
Msa0201070 | Msa0486600 | 0.831265 | 1.840765e-55 | -8.615850e-47 |
Msa0201070 | Msa0490870 | 0.820697 | 5.979956e-53 | -8.615850e-47 |
Msa0201070 | Msa0492880 | 0.819966 | 8.798994e-53 | -8.615850e-47 |
Msa0201070 | Msa0493000 | 0.831995 | 1.216684e-55 | -8.615850e-47 |
Msa0201070 | Msa0497780 | 0.810631 | 1.047077e-50 | -8.615850e-47 |
Msa0201070 | Msa0498220 | 0.836049 | 1.175023e-56 | -8.615850e-47 |
Msa0201070 | Msa0502890 | 0.811754 | 5.976812e-51 | -8.615850e-47 |
Msa0201070 | Msa0503060 | 0.807945 | 3.943654e-50 | -8.615850e-47 |
Msa0201070 | Msa0512900 | 0.811974 | 5.353766e-51 | -8.615850e-47 |
Msa0201070 | Msa0516370 | 0.850286 | 1.873397e-60 | -8.615850e-47 |
Msa0201070 | Msa0536220 | 0.823137 | 1.628773e-53 | -8.615850e-47 |
Msa0201070 | Msa0537720 | 0.802731 | 4.882516e-49 | -8.615850e-47 |
Msa0201070 | Msa0538600 | 0.837508 | 4.986710e-57 | -8.615850e-47 |
Msa0201070 | Msa0548280 | -0.807118 | 5.908953e-50 | -8.615850e-47 |
Msa0201070 | Msa0553460 | 0.826780 | 2.248142e-54 | -8.615850e-47 |
Msa0201070 | Msa0554740 | 0.807091 | 5.985628e-50 | -8.615850e-47 |
Msa0201070 | Msa0555020 | 0.813601 | 2.356483e-51 | -8.615850e-47 |
Msa0201070 | Msa0562440 | 0.800386 | 1.476868e-48 | -8.615850e-47 |
Msa0201070 | Msa0567020 | 0.822633 | 2.133799e-53 | -8.615850e-47 |
Msa0201070 | Msa0569280 | 0.826930 | 2.069570e-54 | -8.615850e-47 |
Msa0201070 | Msa0570970 | 0.819491 | 1.129608e-52 | -8.615850e-47 |
Msa0201070 | Msa0572420 | 0.834453 | 2.970997e-56 | -8.615850e-47 |
Msa0201070 | Msa0572480 | 0.851332 | 9.506148e-61 | -8.615850e-47 |
Msa0201070 | Msa0576880 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
Msa0201070 | Msa0581760 | 0.807085 | 6.004021e-50 | -8.615850e-47 |
Msa0201070 | Msa0585230 | 0.825228 | 5.256587e-54 | -8.615850e-47 |
Msa0201070 | Msa0585700 | 0.825205 | 5.321252e-54 | -8.615850e-47 |
Msa0201070 | Msa0598780 | 0.818234 | 2.180051e-52 | -8.615850e-47 |
Msa0201070 | Msa0598790 | 0.817992 | 2.472507e-52 | -8.615850e-47 |
Msa0201070 | Msa0599290 | 0.819299 | 1.249549e-52 | -8.615850e-47 |
Msa0201070 | Msa0599890 | 0.854568 | 1.128765e-61 | -8.615850e-47 |
Msa0201070 | Msa0601750 | 0.804479 | 2.117810e-49 | -8.615850e-47 |
Msa0201070 | Msa0607540 | 0.836989 | 6.770632e-57 | -8.615850e-47 |
Msa0201070 | Msa0608620 | 0.817114 | 3.899743e-52 | -8.615850e-47 |
Msa0201070 | Msa0613460 | 0.807550 | 4.785391e-50 | -8.615850e-47 |
Msa0201070 | Msa0621590 | 0.833224 | 6.029977e-56 | -8.615850e-47 |
Msa0201070 | Msa0626090 | 0.801923 | 7.161344e-49 | -8.615850e-47 |
Msa0201070 | Msa0626280 | 0.805348 | 1.393862e-49 | -8.615850e-47 |
Msa0201070 | Msa0626820 | 0.803112 | 4.072879e-49 | -8.615850e-47 |
Msa0201070 | Msa0633700 | 0.814880 | 1.230009e-51 | -8.615850e-47 |
Msa0201070 | Msa0644840 | 0.804625 | 1.974548e-49 | -8.615850e-47 |
Msa0201070 | Msa0647830 | 0.807449 | 5.027744e-50 | -8.615850e-47 |
Msa0201070 | Msa0648880 | 0.819582 | 1.077058e-52 | -8.615850e-47 |
Msa0201070 | Msa0653510 | 0.808611 | 2.844557e-50 | -8.615850e-47 |
Msa0201070 | Msa0657610 | 0.809826 | 1.561841e-50 | -8.615850e-47 |
Msa0201070 | Msa0657970 | 0.843182 | 1.640324e-58 | -8.615850e-47 |
Msa0201070 | Msa0658570 | 0.845426 | 4.092688e-59 | -8.615850e-47 |
Msa0201070 | Msa0663240 | 0.834966 | 2.207810e-56 | -8.615850e-47 |
Msa0201070 | Msa0663380 | 0.829852 | 4.082959e-55 | -8.615850e-47 |
Msa0201070 | Msa0672690 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
Msa0201070 | Msa0682550 | 0.815178 | 1.056232e-51 | -8.615850e-47 |
Msa0201070 | Msa0685750 | 0.805752 | 1.147141e-49 | -8.615850e-47 |
Msa0201070 | Msa0688070 | 0.814286 | 1.664944e-51 | -8.615850e-47 |
Msa0201070 | Msa0688480 | 0.820406 | 6.974197e-53 | -8.615850e-47 |
Msa0201070 | Msa0689800 | 0.832820 | 7.601065e-56 | -8.615850e-47 |
Msa0201070 | Msa0690440 | 0.808276 | 3.353876e-50 | -8.615850e-47 |
Msa0201070 | Msa0691380 | 0.806565 | 7.733554e-50 | -8.615850e-47 |
Msa0201070 | Msa0692230 | 0.835398 | 1.717123e-56 | -8.615850e-47 |
Msa0201070 | Msa0693380 | 0.838217 | 3.279463e-57 | -8.615850e-47 |
Msa0201070 | Msa0695430 | 0.815627 | 8.391456e-52 | -8.615850e-47 |
Msa0201070 | Msa0696640 | 0.800747 | 1.246557e-48 | -8.615850e-47 |
Msa0201070 | Msa0697060 | 0.814942 | 1.191562e-51 | -8.615850e-47 |
Msa0201070 | Msa0701900 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
Msa0201070 | Msa0703050 | 0.817996 | 2.467958e-52 | -8.615850e-47 |
Msa0201070 | Msa0703490 | 0.816457 | 5.476602e-52 | -8.615850e-47 |
Msa0201070 | Msa0705470 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
Msa0201070 | Msa0716530 | 0.804304 | 2.303243e-49 | -8.615850e-47 |
Msa0201070 | Msa0722650 | 0.808838 | 2.543417e-50 | -8.615850e-47 |
Msa0201070 | Msa0724210 | 0.821233 | 4.501885e-53 | -8.615850e-47 |
Msa0201070 | Msa0725220 | 0.822253 | 2.615285e-53 | -8.615850e-47 |
Msa0201070 | Msa0731940 | 0.815276 | 1.004463e-51 | -8.615850e-47 |
Msa0201070 | Msa0759410 | 0.817914 | 2.575576e-52 | -8.615850e-47 |
Msa0201070 | Msa0760130 | 0.806916 | 6.520144e-50 | -8.615850e-47 |
Msa0201070 | Msa0764570 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
Msa0201070 | Msa0766630 | 0.824389 | 8.287847e-54 | -8.615850e-47 |
Msa0201070 | Msa0775110 | 0.800619 | 1.323747e-48 | -8.615850e-47 |
Msa0201070 | Msa0775190 | 0.805258 | 1.456068e-49 | -8.615850e-47 |
Msa0201070 | Msa0777230 | 0.811263 | 7.639241e-51 | -8.615850e-47 |
Msa0201070 | Msa0786340 | 0.808916 | 2.447817e-50 | -8.615850e-47 |
Msa0201070 | Msa0790510 | 0.844786 | 6.093677e-59 | -8.615850e-47 |
Msa0201070 | Msa0794510 | -0.819686 | 1.019472e-52 | -8.615850e-47 |
Msa0201070 | Msa0803300 | 0.800304 | 1.534731e-48 | -8.615850e-47 |
Msa0201070 | Msa0806090 | 0.807914 | 4.004915e-50 | -8.615850e-47 |
Msa0201070 | Msa0810220 | 0.819142 | 1.356260e-52 | -8.615850e-47 |
Msa0201070 | Msa0813400 | 0.804421 | 2.177950e-49 | -8.615850e-47 |
Msa0201070 | Msa0816710 | 0.814264 | 1.683377e-51 | -8.615850e-47 |
Msa0201070 | Msa0828540 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
Msa0201070 | Msa0828850 | 0.819541 | 1.100109e-52 | -8.615850e-47 |
Msa0201070 | Msa0832370 | 0.816201 | 6.248195e-52 | -8.615850e-47 |
Msa0201070 | Msa0834880 | 0.801631 | 8.221838e-49 | -8.615850e-47 |
Msa0201070 | Msa0844240 | 0.843400 | 1.434380e-58 | -8.615850e-47 |
Msa0201070 | Msa0846810 | 0.819983 | 8.718146e-53 | -8.615850e-47 |
Msa0201070 | Msa0861130 | 0.804248 | 2.365751e-49 | -8.615850e-47 |
Msa0201070 | Msa0867890 | 0.826521 | 2.592298e-54 | -8.615850e-47 |
Msa0201070 | Msa0870530 | 0.828576 | 8.328179e-55 | -8.615850e-47 |
Msa0201070 | Msa0876850 | -0.829034 | 6.451836e-55 | -8.615850e-47 |
Msa0201070 | Msa0880140 | 0.825423 | 4.726427e-54 | -8.615850e-47 |
Msa0201070 | Msa0880950 | 0.803074 | 4.146830e-49 | -8.615850e-47 |
Msa0201070 | Msa0882690 | 0.807014 | 6.215023e-50 | -8.615850e-47 |
Msa0201070 | Msa0884470 | 0.810851 | 9.383417e-51 | -8.615850e-47 |
Msa0201070 | Msa0885280 | 0.813279 | 2.773335e-51 | -8.615850e-47 |
Msa0201070 | Msa0886330 | -0.846264 | 2.422024e-59 | -8.615850e-47 |
Msa0201070 | Msa0891040 | 0.863525 | 2.338674e-64 | -8.615850e-47 |
Msa0201070 | Msa0897880 | 0.802536 | 5.355766e-49 | -8.615850e-47 |
Msa0201070 | Msa0903700 | 0.838854 | 2.244868e-57 | -8.615850e-47 |
Msa0201070 | Msa0907070 | 0.829772 | 4.269570e-55 | -8.615850e-47 |
Msa0201070 | Msa0908770 | -0.810768 | 9.779688e-51 | -8.615850e-47 |
Msa0201070 | Msa0909120 | 0.816974 | 4.192271e-52 | -8.615850e-47 |
Msa0201070 | Msa0910980 | -0.803416 | 3.522090e-49 | -8.615850e-47 |
Msa0201070 | Msa0913480 | -0.832399 | 9.665413e-56 | -8.615850e-47 |
Msa0201070 | Msa0922410 | 0.834136 | 3.568619e-56 | -8.615850e-47 |
Msa0201070 | Msa0925250 | 0.812763 | 3.599759e-51 | -8.615850e-47 |
Msa0201070 | Msa0925290 | 0.825604 | 4.281092e-54 | -8.615850e-47 |
Msa0201070 | Msa0927290 | 0.825324 | 4.986900e-54 | -8.615850e-47 |
Msa0201070 | Msa0927380 | 0.800692 | 1.279457e-48 | -8.615850e-47 |
Msa0201070 | Msa0930460 | -0.823454 | 1.372950e-53 | -8.615850e-47 |
Msa0201070 | Msa0933100 | 0.803946 | 2.734607e-49 | -8.615850e-47 |
Msa0201070 | Msa0935910 | 0.804870 | 1.755335e-49 | -8.615850e-47 |
Msa0201070 | Msa0936210 | 0.827122 | 1.862292e-54 | -8.615850e-47 |
Msa0201070 | Msa0942080 | -0.832414 | 9.582449e-56 | -8.615850e-47 |
Msa0201070 | Msa0954550 | 0.800418 | 1.455064e-48 | -8.615850e-47 |
Msa0201070 | Msa0954920 | 0.801717 | 7.892881e-49 | -8.615850e-47 |
Msa0201070 | Msa0959360 | 0.813294 | 2.753147e-51 | -8.615850e-47 |
Msa0201070 | Msa0966090 | 0.816433 | 5.544570e-52 | -8.615850e-47 |
Msa0201070 | Msa0967280 | 0.828048 | 1.116282e-54 | -8.615850e-47 |
Msa0201070 | Msa0969520 | 0.827071 | 1.915826e-54 | -8.615850e-47 |
Msa0201070 | Msa0973150 | 0.817715 | 2.856473e-52 | -8.615850e-47 |
Msa0201070 | Msa0976670 | 0.841883 | 3.626094e-58 | -8.615850e-47 |
Msa0201070 | Msa0983090 | 0.800279 | 1.552896e-48 | -8.615850e-47 |
Msa0201070 | Msa0990960 | 0.846114 | 2.660871e-59 | -8.615850e-47 |
Msa0201070 | Msa0992490 | -0.827475 | 1.533182e-54 | -8.615850e-47 |
Msa0201070 | Msa0998680 | 0.817523 | 3.155139e-52 | -8.615850e-47 |
Msa0201070 | Msa0998690 | 0.817121 | 3.886962e-52 | -8.615850e-47 |
Msa0201070 | Msa1000880 | 0.810270 | 1.252921e-50 | -8.615850e-47 |
Msa0201070 | Msa1001200 | 0.806047 | 9.945546e-50 | -8.615850e-47 |
Msa0201070 | Msa1006850 | 0.827019 | 1.971415e-54 | -8.615850e-47 |
Msa0201070 | Msa1014540 | 0.824573 | 7.501745e-54 | -8.615850e-47 |
Msa0201070 | Msa1032850 | 0.805917 | 1.058751e-49 | -8.615850e-47 |
Msa0201070 | Msa1034710 | 0.804365 | 2.237414e-49 | -8.615850e-47 |
Msa0201070 | Msa1041600 | -0.830106 | 3.540535e-55 | -8.615850e-47 |
Msa0201070 | Msa1041730 | 0.812709 | 3.699367e-51 | -8.615850e-47 |
Msa0201070 | Msa1043920 | 0.807429 | 5.076990e-50 | -8.615850e-47 |
Msa0201070 | Msa1052830 | 0.817582 | 3.059919e-52 | -8.615850e-47 |
Msa0201070 | Msa1059570 | 0.810667 | 1.028378e-50 | -8.615850e-47 |
Msa0201070 | Msa1061020 | -0.807217 | 5.629772e-50 | -8.615850e-47 |
Msa0201070 | Msa1061060 | -0.803582 | 3.253766e-49 | -8.615850e-47 |
Msa0201070 | Msa1068200 | -0.850418 | 1.720057e-60 | -8.615850e-47 |
Msa0201070 | Msa1069990 | 0.837521 | 4.948362e-57 | -8.615850e-47 |
Msa0201070 | Msa1073070 | -0.810775 | 9.744923e-51 | -8.615850e-47 |
Msa0201070 | Msa1073240 | 0.813756 | 2.178271e-51 | -8.615850e-47 |
Msa0201070 | Msa1075220 | -0.884010 | 2.760983e-71 | -8.615850e-47 |
Msa0201070 | Msa1077390 | 0.808783 | 2.614260e-50 | -8.615850e-47 |
Msa0201070 | Msa1080160 | 0.817840 | 2.676789e-52 | -8.615850e-47 |
Msa0201070 | Msa1081590 | 0.826283 | 2.953880e-54 | -8.615850e-47 |
Msa0201070 | Msa1082500 | 0.848676 | 5.267306e-60 | -8.615850e-47 |
Msa0201070 | Msa1082580 | 0.814575 | 1.436803e-51 | -8.615850e-47 |
Msa0201070 | Msa1083410 | 0.803513 | 3.362789e-49 | -8.615850e-47 |
Msa0201070 | Msa1084260 | 0.855343 | 6.725945e-62 | -8.615850e-47 |
Msa0201070 | Msa1085300 | 0.818078 | 2.364239e-52 | -8.615850e-47 |
Msa0201070 | Msa1088950 | 0.827449 | 1.554661e-54 | -8.615850e-47 |
Msa0201070 | Msa1090260 | 0.817920 | 2.567410e-52 | -8.615850e-47 |
Msa0201070 | Msa1094790 | 0.803817 | 2.908817e-49 | -8.615850e-47 |
Msa0201070 | Msa1107810 | -0.823398 | 1.415480e-53 | -8.615850e-47 |
Msa0201070 | Msa1115020 | 0.825152 | 5.477313e-54 | -8.615850e-47 |
Msa0201070 | Msa1115430 | 0.811390 | 7.171296e-51 | -8.615850e-47 |
Msa0201070 | Msa1116130 | -0.854028 | 1.616927e-61 | -8.615850e-47 |
Msa0201070 | Msa1121450 | -0.815476 | 9.067684e-52 | -8.615850e-47 |
Msa0201070 | Msa1121490 | 0.807955 | 3.925331e-50 | -8.615850e-47 |
Msa0201070 | Msa1122250 | 0.811241 | 7.724553e-51 | -8.615850e-47 |
Msa0201070 | Msa1124540 | -0.808699 | 2.724669e-50 | -8.615850e-47 |
Msa0201070 | Msa1125080 | 0.802162 | 6.394382e-49 | -8.615850e-47 |
Msa0201070 | Msa1130270 | -0.815763 | 7.825976e-52 | -8.615850e-47 |
Msa0201070 | Msa1132970 | 0.804464 | 2.133094e-49 | -8.615850e-47 |
Msa0201070 | Msa1137570 | 0.800871 | 1.176283e-48 | -8.615850e-47 |
Msa0201070 | Msa1137600 | 0.814905 | 1.214275e-51 | -8.615850e-47 |
Msa0201070 | Msa1139000 | -0.862008 | 6.869762e-64 | -8.615850e-47 |
Msa0201070 | Msa1144720 | -0.808736 | 2.674477e-50 | -8.615850e-47 |
Msa0201070 | Msa1151730 | 0.857168 | 1.962055e-62 | -8.615850e-47 |
Msa0201070 | Msa1154710 | 0.803224 | 3.860616e-49 | -8.615850e-47 |
Msa0201070 | Msa1156340 | -0.846746 | 1.790133e-59 | -8.615850e-47 |
Msa0201070 | Msa1160670 | 0.810649 | 1.038019e-50 | -8.615850e-47 |
Msa0201070 | Msa1162550 | -0.885204 | 9.943487e-72 | -8.615850e-47 |
Msa0201070 | Msa1166500 | -0.831626 | 1.500679e-55 | -8.615850e-47 |
Msa0201070 | Msa1167220 | 0.829677 | 4.502051e-55 | -8.615850e-47 |
Msa0201070 | Msa1171910 | 0.836066 | 1.163653e-56 | -8.615850e-47 |
Msa0201070 | Msa1184530 | 0.823868 | 1.098792e-53 | -8.615850e-47 |
Msa0201070 | Msa1191370 | 0.804799 | 1.816268e-49 | -8.615850e-47 |
Msa0201070 | Msa1199220 | 0.809434 | 1.895806e-50 | -8.615850e-47 |
Msa0201070 | Msa1199830 | -0.803619 | 3.197117e-49 | -8.615850e-47 |
Msa0201070 | Msa1205130 | 0.808671 | 2.761315e-50 | -8.615850e-47 |
Msa0201070 | Msa1220150 | 0.811303 | 7.491405e-51 | -8.615850e-47 |
Msa0201070 | Msa1222970 | 0.807467 | 4.982691e-50 | -8.615850e-47 |
Msa0201070 | Msa1224340 | 0.807353 | 5.269966e-50 | -8.615850e-47 |
Msa0201070 | Msa1224480 | 0.814933 | 1.197002e-51 | -8.615850e-47 |
Msa0201070 | Msa1226660 | 0.800191 | 1.618407e-48 | -8.615850e-47 |
Msa0201070 | Msa1228210 | 0.820438 | 6.857326e-53 | -8.615850e-47 |
Msa0201070 | Msa1229600 | 0.805134 | 1.545456e-49 | -8.615850e-47 |
Msa0201070 | Msa1233500 | 0.825573 | 4.354741e-54 | -8.615850e-47 |
Msa0201070 | Msa1233890 | 0.847351 | 1.222056e-59 | -8.615850e-47 |
Msa0201070 | Msa1235750 | 0.814258 | 1.688145e-51 | -8.615850e-47 |
Msa0201070 | Msa1238930 | 0.809631 | 1.719666e-50 | -8.615850e-47 |
Msa0201070 | Msa1241130 | -0.825986 | 3.475312e-54 | -8.615850e-47 |
Msa0201070 | Msa1242220 | 0.825260 | 5.163521e-54 | -8.615850e-47 |
Msa0201070 | Msa1242230 | 0.815954 | 7.095024e-52 | -8.615850e-47 |
Msa0201070 | Msa1242240 | 0.818114 | 2.320468e-52 | -8.615850e-47 |
Msa0201070 | Msa1247030 | 0.800010 | 1.761605e-48 | -8.615850e-47 |
Msa0201070 | Msa1249490 | 0.804843 | 1.777898e-49 | -8.615850e-47 |
Msa0201070 | Msa1261250 | 0.826973 | 2.021962e-54 | -8.615850e-47 |
Msa0201070 | Msa1271300 | 0.811491 | 6.817768e-51 | -8.615850e-47 |
Msa0201070 | Msa1273430 | 0.839598 | 1.439521e-57 | -8.615850e-47 |
Msa0201070 | Msa1278840 | 0.841734 | 3.970029e-58 | -8.615850e-47 |
Msa0201070 | Msa1279210 | 0.807831 | 4.171319e-50 | -8.615850e-47 |
Msa0201070 | Msa1282580 | -0.817338 | 3.472256e-52 | -8.615850e-47 |
Msa0201070 | Msa1283860 | 0.844462 | 7.448591e-59 | -8.615850e-47 |
Msa0201070 | Msa1284680 | 0.835347 | 1.768976e-56 | -8.615850e-47 |
Msa0201070 | Msa1288340 | 0.834108 | 3.626019e-56 | -8.615850e-47 |
Msa0201070 | Msa1291660 | 0.827817 | 1.268607e-54 | -8.615850e-47 |
Msa0201070 | Msa1297290 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
Msa0201070 | Msa1305340 | 0.800096 | 1.691573e-48 | -8.615850e-47 |
Msa0201070 | Msa1306850 | 0.835511 | 1.608255e-56 | -8.615850e-47 |
Msa0201070 | Msa1308380 | 0.809423 | 1.906086e-50 | -8.615850e-47 |
Msa0201070 | Msa1310210 | 0.811551 | 6.615355e-51 | -8.615850e-47 |
Msa0201070 | Msa1313150 | 0.808388 | 3.174493e-50 | -8.615850e-47 |
Msa0201070 | Msa1314340 | 0.804892 | 1.736320e-49 | -8.615850e-47 |
Msa0201070 | Msa1318990 | 0.812532 | 4.042917e-51 | -8.615850e-47 |
Msa0201070 | Msa1322860 | 0.809769 | 1.606174e-50 | -8.615850e-47 |
Msa0201070 | Msa1322890 | 0.829626 | 4.634205e-55 | -8.615850e-47 |
Msa0201070 | Msa1324780 | 0.806078 | 9.795892e-50 | -8.615850e-47 |
Msa0201070 | Msa1343760 | 0.806212 | 9.177262e-50 | -8.615850e-47 |
Msa0201070 | Msa1353470 | 0.809710 | 1.653631e-50 | -8.615850e-47 |
Msa0201070 | Msa1357530 | 0.802571 | 5.266124e-49 | -8.615850e-47 |
Msa0201070 | Msa1359040 | 0.813307 | 2.734784e-51 | -8.615850e-47 |
Msa0201070 | Msa1364830 | 0.812314 | 4.511251e-51 | -8.615850e-47 |
Msa0201070 | Msa1367080 | 0.821225 | 4.521192e-53 | -8.615850e-47 |
Msa0201070 | Msa1369530 | 0.811669 | 6.236128e-51 | -8.615850e-47 |
Msa0201070 | Msa1372760 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
Msa0201070 | Msa1376890 | 0.838873 | 2.220544e-57 | -8.615850e-47 |
Msa0201070 | Msa1379850 | 0.820608 | 6.269622e-53 | -8.615850e-47 |
Msa0201070 | Msa1384350 | 0.831260 | 1.845901e-55 | -8.615850e-47 |
Msa0201070 | Msa1385000 | 0.811163 | 8.030877e-51 | -8.615850e-47 |
Msa0201070 | Msa1392260 | 0.867354 | 1.455903e-65 | -8.615850e-47 |
Msa0201070 | Msa1393040 | 0.824048 | 9.970086e-54 | -8.615850e-47 |
Msa0201070 | Msa1393410 | 0.810886 | 9.221335e-51 | -8.615850e-47 |
Msa0201070 | Msa1397860 | 0.808944 | 2.415032e-50 | -8.615850e-47 |
Msa0201070 | Msa1403480 | 0.807233 | 5.587759e-50 | -8.615850e-47 |
Msa0201070 | Msa1404540 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
Msa0201070 | Msa1407060 | 0.828689 | 7.820036e-55 | -8.615850e-47 |
Msa0201070 | Msa1409870 | 0.800116 | 1.676241e-48 | -8.615850e-47 |
Msa0201070 | Msa1411020 | 0.807421 | 5.095558e-50 | -8.615850e-47 |
Msa0201070 | Msa1414740 | 0.839682 | 1.368824e-57 | -8.615850e-47 |
Msa0201070 | Msa1420290 | 0.849592 | 2.929370e-60 | -8.615850e-47 |
Msa0201070 | Msa1420490 | 0.800851 | 1.187181e-48 | -8.615850e-47 |
Msa0201070 | Msa1423880 | 0.833249 | 5.943488e-56 | -8.615850e-47 |
Msa0201070 | Msa1424290 | 0.804251 | 2.362411e-49 | -8.615850e-47 |
Msa0201070 | Msa1424680 | 0.815628 | 8.384544e-52 | -8.615850e-47 |
Msa0201070 | Msa1429150 | 0.843661 | 1.221455e-58 | -8.615850e-47 |
Msa0201070 | Msa1429900 | 0.835864 | 1.309207e-56 | -8.615850e-47 |
Msa0201070 | Msa1434350 | 0.803154 | 3.990642e-49 | -8.615850e-47 |
Msa0201070 | Msa1435420 | 0.810837 | 9.448656e-51 | -8.615850e-47 |
Msa0201070 | Msa1436040 | 0.805084 | 1.583428e-49 | -8.615850e-47 |
Msa0201070 | Msa1438970 | 0.853441 | 2.385209e-61 | -8.615850e-47 |
Msa0201070 | Msa1439320 | 0.808497 | 3.008496e-50 | -8.615850e-47 |
Msa0201070 | Msa1441190 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
Msa0201070 | Msa1451620 | -0.850700 | 1.433065e-60 | -8.615850e-47 |
Msa0201070 | Msa1453320 | 0.804561 | 2.036044e-49 | -8.615850e-47 |
Msa0201070 | Msa1453560 | 0.836230 | 1.056784e-56 | -8.615850e-47 |
Msa0201070 | Msa1454120 | 0.836212 | 1.068388e-56 | -8.615850e-47 |
Msa0201070 | Msa1461250 | -0.818779 | 1.640114e-52 | -8.615850e-47 |
Msa0201070 | Msa1461810 | -0.828487 | 8.747750e-55 | -8.615850e-47 |
Msa0201070 | Msa1464940 | 0.841753 | 3.925653e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0201070 | MtrunA17_Chr2g0297021 | 95.238 | 252 | 1 | 1 | 1 | 252 | 1 | 241 | 2.67e-179 | 493 |
Msa0201070 | MtrunA17_Chr3g0120311 | 80.000 | 240 | 33 | 1 | 13 | 252 | 15 | 239 | 2.67e-145 | 408 |
Msa0201070 | MtrunA17_Chr4g0032051 | 78.322 | 143 | 17 | 3 | 111 | 252 | 20 | 149 | 9.24e-61 | 190 |
Msa0201070 | MtrunA17_Chr4g0032041 | 98.630 | 73 | 1 | 0 | 66 | 138 | 1 | 73 | 1.38e-47 | 156 |
Msa0201070 | MtrunA17_Chr4g0032031 | 83.051 | 59 | 9 | 1 | 1 | 59 | 1 | 58 | 1.43e-29 | 105 |
Msa0201070 | MtrunA17_Chr7g0245591 | 40.000 | 145 | 79 | 3 | 11 | 151 | 50 | 190 | 1.88e-28 | 112 |
Msa0201070 | MtrunA17_Chr7g0245591 | 36.957 | 92 | 54 | 2 | 18 | 107 | 258 | 347 | 2.94e-12 | 65.9 |
Msa0201070 | MtrunA17_Chr8g0389111 | 42.553 | 141 | 73 | 3 | 16 | 152 | 65 | 201 | 9.71e-27 | 107 |
Msa0201070 | MtrunA17_Chr8g0389111 | 35.484 | 155 | 93 | 4 | 18 | 169 | 256 | 406 | 2.74e-19 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0201070 | AT2G32260.1 | 79.253 | 241 | 34 | 3 | 13 | 252 | 32 | 257 | 5.31e-141 | 399 |
Msa0201070 | AT2G32260.2 | 77.830 | 212 | 31 | 3 | 42 | 252 | 12 | 208 | 2.43e-119 | 342 |
Msa0201070 | AT2G38670.1 | 38.272 | 162 | 89 | 4 | 14 | 171 | 53 | 207 | 7.50e-28 | 110 |
Msa0201070 | AT2G38670.1 | 32.692 | 156 | 100 | 3 | 18 | 170 | 257 | 410 | 9.58e-18 | 82.4 |
Find 49 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGGCTATTGGAAAATTTA+AGG | 0.163999 | 2_1:+21843983 | Msa0201070:CDS |
CTTATACAGGTTAAGGCTAT+TGG | 0.232230 | 2_1:+21843972 | Msa0201070:intron |
GACAAAATGAGAGAGTAAAA+AGG | 0.290639 | 2_1:+21839947 | Msa0201070:five_prime_UTR |
TAGTTGAAATTACGATTTCT+TGG | 0.309549 | 2_1:-21840184 | None:intergenic |
GTTCCTATCTGCACATAGTT+TGG | 0.355935 | 2_1:-21845062 | None:intergenic |
CCAAACACATATCTCCTTGT+TGG | 0.358023 | 2_1:+21840695 | Msa0201070:CDS |
TTGATTACCCACGGCACATC+TGG | 0.373662 | 2_1:-21842125 | None:intergenic |
CCAGTATGTAATGCGTAATC+TGG | 0.373754 | 2_1:+21844070 | Msa0201070:CDS |
CTTGGCTTGTTCAAGAGAAC+GGG | 0.379292 | 2_1:-21840166 | None:intergenic |
CCAGATTACGCATTACATAC+TGG | 0.416241 | 2_1:-21844070 | None:intergenic |
CCATCAGCATAAACACGAAC+AGG | 0.422644 | 2_1:-21840114 | None:intergenic |
TGAAGAAGGATGCCACAAAA+TGG | 0.436374 | 2_1:+21845166 | Msa0201070:CDS |
GGAACAGTGAGAAGAATTGC+TGG | 0.441857 | 2_1:+21845080 | Msa0201070:CDS |
ATTTACGATCTCTTTCACTT+TGG | 0.443426 | 2_1:+21840138 | Msa0201070:CDS |
AATGCAGATCGATTAGTTGC+TGG | 0.449023 | 2_1:+21845128 | Msa0201070:CDS |
CCAACAAGGAGATATGTGTT+TGG | 0.467300 | 2_1:-21840695 | None:intergenic |
CCTGTTCGTGTTTATGCTGA+TGG | 0.469877 | 2_1:+21840114 | Msa0201070:CDS |
TGTGCCGTGGGTAATCAATC+AGG | 0.490691 | 2_1:+21842130 | Msa0201070:CDS |
GAACAAGATGACTCTGAAGT+TGG | 0.491101 | 2_1:+21840078 | Msa0201070:CDS |
TTCAATGTTCAGAGTCAAAA+CGG | 0.491199 | 2_1:-21840027 | None:intergenic |
GCAAGAGACTGTAGGAAAGA+AGG | 0.492142 | 2_1:+21844331 | Msa0201070:CDS |
TTTCTCGAGATGTTTGAAGA+AGG | 0.505057 | 2_1:+21845152 | Msa0201070:CDS |
TATGCTGATACAAGTGGAGC+TGG | 0.511409 | 2_1:+21843649 | Msa0201070:CDS |
TCTTGGCTTGTTCAAGAGAA+CGG | 0.511606 | 2_1:-21840167 | None:intergenic |
AAGCCAAACTATGTGCAGAT+AGG | 0.520262 | 2_1:+21845059 | Msa0201070:CDS |
CATAGTTATGCTGATACAAG+TGG | 0.557570 | 2_1:+21843643 | Msa0201070:intron |
CTTGTTCAAGAGAACGGGCA+TGG | 0.557740 | 2_1:-21840161 | None:intergenic |
TGAGATCACACACAAGTACA+AGG | 0.560848 | 2_1:+21840730 | Msa0201070:CDS |
GAAAAGATTGAGAATGAACA+TGG | 0.563205 | 2_1:+21844274 | Msa0201070:CDS |
GGATCGTGGTTATTCAAGAA+AGG | 0.563355 | 2_1:+21844091 | Msa0201070:CDS |
AAGGAAACAAAGAGGACTGA+AGG | 0.570979 | 2_1:+21844002 | Msa0201070:CDS |
CTGGGATGAACCGTACTGAA+TGG | 0.573855 | 2_1:+21845099 | Msa0201070:CDS |
TGGGATGAACCGTACTGAAT+GGG | 0.582067 | 2_1:+21845100 | Msa0201070:CDS |
TATCATAATGAGAATCATCA+AGG | 0.585536 | 2_1:+21844040 | Msa0201070:CDS |
AAGTTATTCCAGATGTGCCG+TGG | 0.587410 | 2_1:+21842117 | Msa0201070:CDS |
AACTCCTGATTGATTACCCA+CGG | 0.589451 | 2_1:-21842134 | None:intergenic |
AAGAAACAGCAAGAGACTGT+AGG | 0.592810 | 2_1:+21844323 | Msa0201070:CDS |
TGATACAAGTGGAGCTGGAA+AGG | 0.599993 | 2_1:+21843654 | Msa0201070:CDS |
GCTAGGTGTTAGCTATGTCA+AGG | 0.608221 | 2_1:+21844115 | Msa0201070:CDS |
GAAAATTTAAGGAAACAAAG+AGG | 0.614590 | 2_1:+21843994 | Msa0201070:CDS |
GAACAGTGAGAAGAATTGCT+GGG | 0.618852 | 2_1:+21845081 | Msa0201070:CDS |
CATCACTGCAGCATCCAACA+AGG | 0.622451 | 2_1:-21840709 | None:intergenic |
GGTTATTCAAGAAAGGAGCT+AGG | 0.624474 | 2_1:+21844098 | Msa0201070:CDS |
CAAGCACAAAATTGACTATG+TGG | 0.629232 | 2_1:+21842163 | Msa0201070:CDS |
AAAAGATTGAGAATGAACAT+GGG | 0.642829 | 2_1:+21844275 | Msa0201070:CDS |
GATTCTCATTATGATATCAG+AGG | 0.655348 | 2_1:-21844033 | None:intergenic |
AGTTATTCCAGATGTGCCGT+GGG | 0.663969 | 2_1:+21842118 | Msa0201070:CDS |
GTAATGCGTAATCTGGATCG+TGG | 0.679784 | 2_1:+21844077 | Msa0201070:CDS |
GAGATCACACACAAGTACAA+GGG | 0.705592 | 2_1:+21840731 | Msa0201070:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTTTGTTTTTATTTTTA+AGG | + | chr2_1:21840389-21840408 | Msa0201070:intron | 10.0% |
!! | ATAAATAAACATAAAAAAGA+GGG | - | chr2_1:21841406-21841425 | None:intergenic | 10.0% |
!! | AATAAATAAACATAAAAAAG+AGG | - | chr2_1:21841407-21841426 | None:intergenic | 10.0% |
!! | TTTATATGACTTATTTAAAT+TGG | + | chr2_1:21841979-21841998 | Msa0201070:intron | 10.0% |
!!! | TTTTTTTTGTTGTGTTTTTA+AGG | + | chr2_1:21840417-21840436 | Msa0201070:intron | 15.0% |
!!! | TTTTTGTTTTGTTGTTTTTA+AGG | + | chr2_1:21840447-21840466 | Msa0201070:intron | 15.0% |
!!! | TTGTTTTTAAGGTTTTTTTT+TGG | + | chr2_1:21840458-21840477 | Msa0201070:intron | 15.0% |
!! | ATAATTTAACCAAAGAAAAA+AGG | - | chr2_1:21840827-21840846 | None:intergenic | 15.0% |
!!! | TATTTCATCTAGTTATATTT+TGG | + | chr2_1:21841878-21841897 | Msa0201070:intron | 15.0% |
!!! | AACAAAAGAAAACAAATTTT+TGG | - | chr2_1:21841921-21841940 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | - | chr2_1:21842503-21842522 | None:intergenic | 15.0% |
!! | AAATTATCCTTATTAACTAT+TGG | + | chr2_1:21842502-21842521 | Msa0201070:intron | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr2_1:21842526-21842545 | Msa0201070:intron | 15.0% |
!!! | CATTTTGAAACAAATATTTT+TGG | + | chr2_1:21842629-21842648 | Msa0201070:intron | 15.0% |
!! | TCATATACAACTAAATTAAA+AGG | - | chr2_1:21843716-21843735 | None:intergenic | 15.0% |
!! | AAATACATAGTTTAATTGTT+TGG | + | chr2_1:21844465-21844484 | Msa0201070:intron | 15.0% |
!! | AAAAAAACAAGAAACAAAAG+AGG | + | chr2_1:21839977-21839996 | Msa0201070:five_prime_UTR | 20.0% |
!! | TGAAATGAAGCAAAATAAAA+AGG | - | chr2_1:21840217-21840236 | None:intergenic | 20.0% |
!! | AAAATGAAATTGAGAAAGAT+GGG | - | chr2_1:21840264-21840283 | None:intergenic | 20.0% |
!! | AAAAATGAAATTGAGAAAGA+TGG | - | chr2_1:21840265-21840284 | None:intergenic | 20.0% |
!! | GGACTAAATATCATAAAAAA+GGG | - | chr2_1:21840301-21840320 | None:intergenic | 20.0% |
!! | TGGACTAAATATCATAAAAA+AGG | - | chr2_1:21840302-21840321 | None:intergenic | 20.0% |
!! | TAAAAATCCTAATTGCAAAT+GGG | - | chr2_1:21840540-21840559 | None:intergenic | 20.0% |
!! | ATAAAAATCCTAATTGCAAA+TGG | - | chr2_1:21840541-21840560 | None:intergenic | 20.0% |
!!! | ATTTGCAATTAGGATTTTTA+TGG | + | chr2_1:21840540-21840559 | Msa0201070:intron | 20.0% |
!!! | AATTAGGATTTTTATGGTTT+TGG | + | chr2_1:21840546-21840565 | Msa0201070:intron | 20.0% |
!!! | TTTTGTTGTTTGTTAATTGA+AGG | + | chr2_1:21840669-21840688 | Msa0201070:intron | 20.0% |
!!! | TTTCTTTTTCCTTTTTTCTT+TGG | + | chr2_1:21840815-21840834 | Msa0201070:intron | 20.0% |
!!! | CTATTATAGGTTTTACATTT+CGG | + | chr2_1:21841211-21841230 | Msa0201070:intron | 20.0% |
!!! | GAAATTTTTCATGTTATAAC+AGG | - | chr2_1:21841476-21841495 | None:intergenic | 20.0% |
!! | TAAGTAAATAGAAAATGAGA+AGG | - | chr2_1:21842038-21842057 | None:intergenic | 20.0% |
!! | ATAAAAAAGAGAATTATAGC+TGG | - | chr2_1:21842226-21842245 | None:intergenic | 20.0% |
!!! | GAAACAAGAAAACTTTTAAA+AGG | + | chr2_1:21842379-21842398 | Msa0201070:intron | 20.0% |
!! | AATGATTAAAAGAAAGAGAA+TGG | + | chr2_1:21842469-21842488 | Msa0201070:intron | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | - | chr2_1:21842512-21842531 | None:intergenic | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | + | chr2_1:21842589-21842608 | Msa0201070:intron | 20.0% |
!! | TTTAATTCCAGTGAAAAAAA+AGG | - | chr2_1:21842879-21842898 | None:intergenic | 20.0% |
!! | AAATATATAGTCAATCATGT+AGG | - | chr2_1:21843061-21843080 | None:intergenic | 20.0% |
!!! | ATATTTTTAAGTGAATAGTG+TGG | + | chr2_1:21843075-21843094 | Msa0201070:intron | 20.0% |
!! | ACTTTGTTGAAAATGTTATT+TGG | + | chr2_1:21843127-21843146 | Msa0201070:intron | 20.0% |
!!! | CTTTTTCTTAAATTTACGTA+AGG | - | chr2_1:21843169-21843188 | None:intergenic | 20.0% |
!! | TAATATAGTAGTAGTGATAA+TGG | - | chr2_1:21843468-21843487 | None:intergenic | 20.0% |
!! | AACCTGTATAAGAAATTAAT+AGG | - | chr2_1:21843964-21843983 | None:intergenic | 20.0% |
!! | TTAATTTCTTATACAGGTTA+AGG | + | chr2_1:21843965-21843984 | Msa0201070:intron | 20.0% |
!! | TGAACTATCTTATTATAGAT+CGG | + | chr2_1:21844369-21844388 | Msa0201070:intron | 20.0% |
!! | ATGACCTAAATAGAATTTAT+AGG | + | chr2_1:21844673-21844692 | Msa0201070:intron | 20.0% |
!! | ATGTCCTATAAATTCTATTT+AGG | - | chr2_1:21844680-21844699 | None:intergenic | 20.0% |
!! | TAAATAGAATTTATAGGACA+TGG | + | chr2_1:21844679-21844698 | Msa0201070:intron | 20.0% |
!! | AAATAGAATTTATAGGACAT+GGG | + | chr2_1:21844680-21844699 | Msa0201070:intron | 20.0% |
! | TAGTTGAAATTACGATTTCT+TGG | - | chr2_1:21840187-21840206 | None:intergenic | 25.0% |
! | ATGAAGCAAAATAAAAAGGA+GGG | - | chr2_1:21840213-21840232 | None:intergenic | 25.0% |
! | AATGAAGCAAAATAAAAAGG+AGG | - | chr2_1:21840214-21840233 | None:intergenic | 25.0% |
! | AACCCAAAAGAACAAAAAAT+GGG | - | chr2_1:21840327-21840346 | None:intergenic | 25.0% |
! | AAACCCAAAAGAACAAAAAA+TGG | - | chr2_1:21840328-21840347 | None:intergenic | 25.0% |
!!! | TTTGGTGTTGTTTATGATTT+TGG | + | chr2_1:21840476-21840495 | Msa0201070:intron | 25.0% |
! | AAAAAATTGAAGAGTTTGTG+CGG | + | chr2_1:21841028-21841047 | Msa0201070:intron | 25.0% |
! | TAATAGATTGATGAAGTGAA+CGG | + | chr2_1:21841621-21841640 | Msa0201070:intron | 25.0% |
! | AAAAGTAAACACGAGATTAT+AGG | + | chr2_1:21841659-21841678 | Msa0201070:intron | 25.0% |
! | ATTATGTCTGGTCAAAATAT+TGG | + | chr2_1:21841804-21841823 | Msa0201070:intron | 25.0% |
!!! | TATCCTCTTTTAATTGCTTA+CGG | + | chr2_1:21841833-21841852 | Msa0201070:intron | 25.0% |
! | AACTAGATGAAATAACATGA+CGG | - | chr2_1:21841872-21841891 | None:intergenic | 25.0% |
!!! | TTCATCTAGTTATATTTTGG+AGG | + | chr2_1:21841881-21841900 | Msa0201070:intron | 25.0% |
!!! | TCATCTAGTTATATTTTGGA+GGG | + | chr2_1:21841882-21841901 | Msa0201070:intron | 25.0% |
! | TCTAATATACAGTACTACTA+TGG | - | chr2_1:21842015-21842034 | None:intergenic | 25.0% |
! | TTACTTATTTGCTTTCACTA+TGG | + | chr2_1:21842051-21842070 | Msa0201070:intron | 25.0% |
!! | TTATAAGCGTTCTAAATTTG+TGG | + | chr2_1:21842247-21842266 | Msa0201070:intron | 25.0% |
!!! | ATTACTTCCTTTTTTTTCAC+TGG | + | chr2_1:21842869-21842888 | Msa0201070:intron | 25.0% |
! | AAAAATATCATGTGAGAAGA+GGG | - | chr2_1:21843016-21843035 | None:intergenic | 25.0% |
! | AAAAAATATCATGTGAGAAG+AGG | - | chr2_1:21843017-21843036 | None:intergenic | 25.0% |
!!! | TCTTCTCACATGATATTTTT+TGG | + | chr2_1:21843016-21843035 | Msa0201070:intron | 25.0% |
!!! | CTTCTCACATGATATTTTTT+GGG | + | chr2_1:21843017-21843036 | Msa0201070:intron | 25.0% |
! | ATCCACAAAGTTCTTATATA+TGG | + | chr2_1:21843584-21843603 | Msa0201070:intron | 25.0% |
! | CTATGGTAACAAAATAACAA+AGG | - | chr2_1:21843628-21843647 | None:intergenic | 25.0% |
! | TAATCAAAGAGACAAATTGT+TGG | - | chr2_1:21843788-21843807 | None:intergenic | 25.0% |
! | TGCCTATTAATTTCTTATAC+AGG | + | chr2_1:21843959-21843978 | Msa0201070:intron | 25.0% |
! | TAAGGCTATTGGAAAATTTA+AGG | + | chr2_1:21843983-21844002 | Msa0201070:CDS | 25.0% |
! | GAAAATTTAAGGAAACAAAG+AGG | + | chr2_1:21843994-21844013 | Msa0201070:CDS | 25.0% |
! | TATCATAATGAGAATCATCA+AGG | + | chr2_1:21844040-21844059 | Msa0201070:CDS | 25.0% |
!! | ATACATGATCTCTTATTTGT+AGG | + | chr2_1:21844250-21844269 | Msa0201070:intron | 25.0% |
! | AAAAGATTGAGAATGAACAT+GGG | + | chr2_1:21844275-21844294 | Msa0201070:CDS | 25.0% |
! | GATCTATAATAAGATAGTTC+AGG | - | chr2_1:21844370-21844389 | None:intergenic | 25.0% |
! | TCTATTTAGGTCATATTTCT+AGG | - | chr2_1:21844667-21844686 | None:intergenic | 25.0% |
!!! | GCGTAATCCATATTTTTATA+TGG | + | chr2_1:21844743-21844762 | Msa0201070:intron | 25.0% |
! | TCAGATGCCATATAAAAATA+TGG | - | chr2_1:21844753-21844772 | None:intergenic | 25.0% |
! | CAAATGTGTATCAAAAAACA+TGG | - | chr2_1:21844872-21844891 | None:intergenic | 25.0% |
! | ATCATTTCCTAGTAATTCAT+TGG | - | chr2_1:21844934-21844953 | None:intergenic | 25.0% |
! | AATGAATTACTAGGAAATGA+TGG | + | chr2_1:21844933-21844952 | Msa0201070:intron | 25.0% |
! | ATAGTGTCTTAATAATGCAA+AGG | - | chr2_1:21845031-21845050 | None:intergenic | 25.0% |
GACAAAATGAGAGAGTAAAA+AGG | + | chr2_1:21839947-21839966 | Msa0201070:five_prime_UTR | 30.0% | |
TTCAATGTTCAGAGTCAAAA+CGG | - | chr2_1:21840030-21840049 | None:intergenic | 30.0% | |
ATTTACGATCTCTTTCACTT+TGG | + | chr2_1:21840138-21840157 | Msa0201070:CDS | 30.0% | |
AAAAGAACAAAAAATGGGGT+TGG | - | chr2_1:21840322-21840341 | None:intergenic | 30.0% | |
!!! | AACCCCATTTTTTGTTCTTT+TGG | + | chr2_1:21840321-21840340 | Msa0201070:intron | 30.0% |
!!! | ACCCCATTTTTTGTTCTTTT+GGG | + | chr2_1:21840322-21840341 | Msa0201070:intron | 30.0% |
ACCCAAAAGAACAAAAAATG+GGG | - | chr2_1:21840326-21840345 | None:intergenic | 30.0% | |
!!! | TTTTGTTCTTTTGGGTTTGT+TGG | + | chr2_1:21840330-21840349 | Msa0201070:intron | 30.0% |
TTGATTTCCCATTTGCAATT+AGG | + | chr2_1:21840530-21840549 | Msa0201070:intron | 30.0% | |
!! | TGATGAAAGTGTCTATGATT+TGG | + | chr2_1:21840571-21840590 | Msa0201070:intron | 30.0% |
!!! | GATTTGGTTTTTGTTCTTGT+TGG | + | chr2_1:21840587-21840606 | Msa0201070:intron | 30.0% |
TGTAGAATAGTAGATGTATC+AGG | + | chr2_1:21840909-21840928 | Msa0201070:intron | 30.0% | |
AAAAATTGAAGAGTTTGTGC+GGG | + | chr2_1:21841029-21841048 | Msa0201070:intron | 30.0% | |
! | TTATAGGTTTTACATTTCGG+CGG | + | chr2_1:21841214-21841233 | Msa0201070:intron | 30.0% |
TAAAGAATATGGTCGAGATT+TGG | + | chr2_1:21841247-21841266 | Msa0201070:intron | 30.0% | |
AAAAGAGGGAAAAGAAAATC+TGG | - | chr2_1:21841392-21841411 | None:intergenic | 30.0% | |
AAGTTTGATTACTGATGACA+TGG | + | chr2_1:21841450-21841469 | Msa0201070:intron | 30.0% | |
AAATTTCATCCTAACCAGTA+AGG | + | chr2_1:21841489-21841508 | Msa0201070:intron | 30.0% | |
AATTTCATCCTAACCAGTAA+GGG | + | chr2_1:21841490-21841509 | Msa0201070:intron | 30.0% | |
!! | AATAGTCAACAGAAGTATCA+TGG | - | chr2_1:21841593-21841612 | None:intergenic | 30.0% |
! | ATCTTTAAAGATCGTGTTTG+CGG | + | chr2_1:21841722-21841741 | Msa0201070:intron | 30.0% |
! | TTCGTAATGTCAAAGTACTT+TGG | + | chr2_1:21841771-21841790 | Msa0201070:intron | 30.0% |
ACTAGATGAAATAACATGAC+GGG | - | chr2_1:21841871-21841890 | None:intergenic | 30.0% | |
! | ATAACCACTCGTAAGATTTT+AGG | - | chr2_1:21841948-21841967 | None:intergenic | 30.0% |
TATTTGCTTTCACTATGGAT+TGG | + | chr2_1:21842056-21842075 | Msa0201070:intron | 30.0% | |
!! | AAACGACACTCATTTTGAAA+CGG | - | chr2_1:21842420-21842439 | None:intergenic | 30.0% |
!!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr2_1:21842421-21842440 | Msa0201070:intron | 30.0% |
!!! | GAGGGAGTAGTATTTTAATT+TGG | + | chr2_1:21842677-21842696 | Msa0201070:intron | 30.0% |
AGGAAATAGGAGACAAAAAA+GGG | - | chr2_1:21842750-21842769 | None:intergenic | 30.0% | |
AAGATCATAACAGAGGAAAT+AGG | - | chr2_1:21842763-21842782 | None:intergenic | 30.0% | |
GAAAACAAAGATCATAACAG+AGG | - | chr2_1:21842770-21842789 | None:intergenic | 30.0% | |
!!! | CTGTTATGATCTTTGTTTTC+TGG | + | chr2_1:21842770-21842789 | Msa0201070:intron | 30.0% |
!!! | ATGATCTTTGTTTTCTGGTT+TGG | + | chr2_1:21842775-21842794 | Msa0201070:intron | 30.0% |
CTTTAGTAGTCATTCAATTC+CGG | - | chr2_1:21842926-21842945 | None:intergenic | 30.0% | |
AGTTATGTGCAAACTATTCA+TGG | + | chr2_1:21843187-21843206 | Msa0201070:intron | 30.0% | |
TGTTATATTGCCTCAGTAAA+GGG | + | chr2_1:21843217-21843236 | Msa0201070:intron | 30.0% | |
AGAACAGAGTTTAACATGAA+AGG | - | chr2_1:21843251-21843270 | None:intergenic | 30.0% | |
TGTTAAACTCTGTTCTTCAT+AGG | + | chr2_1:21843255-21843274 | Msa0201070:intron | 30.0% | |
TCATAGTAGCTTCTTAAGTT+AGG | + | chr2_1:21843315-21843334 | Msa0201070:intron | 30.0% | |
! | GTCATTTGTTGAATGAGTAT+AGG | + | chr2_1:21843337-21843356 | Msa0201070:intron | 30.0% |
TCATACTTCTATTCAATCTG+TGG | + | chr2_1:21843522-21843541 | Msa0201070:intron | 30.0% | |
CATACTTCTATTCAATCTGT+GGG | + | chr2_1:21843523-21843542 | Msa0201070:intron | 30.0% | |
GACCATATATAAGAACTTTG+TGG | - | chr2_1:21843589-21843608 | None:intergenic | 30.0% | |
CTGTCATTATGTATCAGAAT+AGG | + | chr2_1:21843887-21843906 | Msa0201070:intron | 30.0% | |
AATAGGCATAAGATCATCAA+TGG | - | chr2_1:21843947-21843966 | None:intergenic | 30.0% | |
GATTCTCATTATGATATCAG+AGG | - | chr2_1:21844036-21844055 | None:intergenic | 30.0% | |
CAGAACAATGAAACACATAT+GGG | - | chr2_1:21844175-21844194 | None:intergenic | 30.0% | |
ACAGAACAATGAAACACATA+TGG | - | chr2_1:21844176-21844195 | None:intergenic | 30.0% | |
TGCGAGAAAGTAAACAAATA+CGG | - | chr2_1:21844209-21844228 | None:intergenic | 30.0% | |
GAAAAGATTGAGAATGAACA+TGG | + | chr2_1:21844274-21844293 | Msa0201070:CDS | 30.0% | |
TATCTTATTATAGATCGGCA+AGG | + | chr2_1:21844374-21844393 | Msa0201070:intron | 30.0% | |
ATTGAACACAAACTAGTGAT+AGG | - | chr2_1:21844516-21844535 | None:intergenic | 30.0% | |
CAAACTCAGATAATTCTAAC+AGG | - | chr2_1:21844557-21844576 | None:intergenic | 30.0% | |
! | TTTGGAGTATGAACAAATGT+GGG | - | chr2_1:21844600-21844619 | None:intergenic | 30.0% |
! | ATTTGGAGTATGAACAAATG+TGG | - | chr2_1:21844601-21844620 | None:intergenic | 30.0% |
! | ATACTCCAAATGTTCAGTTT+TGG | + | chr2_1:21844610-21844629 | Msa0201070:intron | 30.0% |
! | TACTCCAAATGTTCAGTTTT+GGG | + | chr2_1:21844611-21844630 | Msa0201070:intron | 30.0% |
GAGTCTATCTTATGTTATTC+TGG | + | chr2_1:21844771-21844790 | Msa0201070:intron | 30.0% | |
AATGAGAGAGTAAAAAGGAG+AGG | + | chr2_1:21839952-21839971 | Msa0201070:five_prime_UTR | 35.0% | |
!!! | TTTGGGTTTGTTGGTTTTCA+TGG | + | chr2_1:21840339-21840358 | Msa0201070:intron | 35.0% |
AGTTCAGATGTGGCTATTAT+AGG | + | chr2_1:21841198-21841217 | Msa0201070:intron | 35.0% | |
GTGTGGGAGAATAAAGAATA+TGG | + | chr2_1:21841236-21841255 | Msa0201070:intron | 35.0% | |
ATTTCATCCTAACCAGTAAG+GGG | + | chr2_1:21841491-21841510 | Msa0201070:intron | 35.0% | |
! | GCAAACACGATCTTTAAAGA+TGG | - | chr2_1:21841723-21841742 | None:intergenic | 35.0% |
AACTCCTAAAATCTTACGAG+TGG | + | chr2_1:21841941-21841960 | Msa0201070:intron | 35.0% | |
CAAGCACAAAATTGACTATG+TGG | + | chr2_1:21842163-21842182 | Msa0201070:CDS | 35.0% | |
AAGAGAATTATAGCTGGACT+GGG | - | chr2_1:21842220-21842239 | None:intergenic | 35.0% | |
AAAGAGAATTATAGCTGGAC+TGG | - | chr2_1:21842221-21842240 | None:intergenic | 35.0% | |
GTAGTGTGCTGAGTATTAAT+TGG | + | chr2_1:21842551-21842570 | Msa0201070:intron | 35.0% | |
TGTGCTGAGTATTAATTGGA+GGG | + | chr2_1:21842555-21842574 | Msa0201070:intron | 35.0% | |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr2_1:21842655-21842674 | Msa0201070:intron | 35.0% |
CAAAAAAGGGGAAACAGAAA+AGG | - | chr2_1:21842737-21842756 | None:intergenic | 35.0% | |
GGAAATAGGAGACAAAAAAG+GGG | - | chr2_1:21842749-21842768 | None:intergenic | 35.0% | |
GAGGAAATAGGAGACAAAAA+AGG | - | chr2_1:21842751-21842770 | None:intergenic | 35.0% | |
TACTTCAAGAACCTTAAAGC+CGG | + | chr2_1:21842904-21842923 | Msa0201070:intron | 35.0% | |
CTGTTATATTGCCTCAGTAA+AGG | + | chr2_1:21843216-21843235 | Msa0201070:intron | 35.0% | |
GTTATATTGCCTCAGTAAAG+GGG | + | chr2_1:21843218-21843237 | Msa0201070:intron | 35.0% | |
TTATATTGCCTCAGTAAAGG+GGG | + | chr2_1:21843219-21843238 | Msa0201070:intron | 35.0% | |
CACTTGTATCAGCATAACTA+TGG | - | chr2_1:21843645-21843664 | None:intergenic | 35.0% | |
CATAGTTATGCTGATACAAG+TGG | + | chr2_1:21843643-21843662 | Msa0201070:intron | 35.0% | |
TTAAGATGAATGACACCAGA+GGG | - | chr2_1:21843760-21843779 | None:intergenic | 35.0% | |
ATTAAGATGAATGACACCAG+AGG | - | chr2_1:21843761-21843780 | None:intergenic | 35.0% | |
TCCTCAGTATATTTCTTGTC+TGG | + | chr2_1:21843862-21843881 | Msa0201070:intron | 35.0% | |
CTTATACAGGTTAAGGCTAT+TGG | + | chr2_1:21843972-21843991 | Msa0201070:intron | 35.0% | |
AATTGTTTGGATGCGTTTCT+TGG | + | chr2_1:21844478-21844497 | Msa0201070:intron | 35.0% | |
ATTGTTTGGATGCGTTTCTT+GGG | + | chr2_1:21844479-21844498 | Msa0201070:intron | 35.0% | |
CAAATGTGGGTGAAATAACA+GGG | - | chr2_1:21844587-21844606 | None:intergenic | 35.0% | |
ACAAATGTGGGTGAAATAAC+AGG | - | chr2_1:21844588-21844607 | None:intergenic | 35.0% | |
CAAACCCAAAACTGAACATT+TGG | - | chr2_1:21844618-21844637 | None:intergenic | 35.0% | |
!! | GTCATATTTCTAGGCAATGT+GGG | - | chr2_1:21844658-21844677 | None:intergenic | 35.0% |
!!! | ATAGCTTTTGGAGTTGAGTT+AGG | + | chr2_1:21844721-21844740 | Msa0201070:intron | 35.0% |
AAATGTGAGTGCAGTATTAG+AGG | - | chr2_1:21844802-21844821 | None:intergenic | 35.0% | |
! | CATTTTCAACCCATTCAGTA+CGG | - | chr2_1:21845112-21845131 | None:intergenic | 35.0% |
TTTCTCGAGATGTTTGAAGA+AGG | + | chr2_1:21845152-21845171 | Msa0201070:CDS | 35.0% | |
!! | GAACAAGATGACTCTGAAGT+TGG | + | chr2_1:21840078-21840097 | Msa0201070:CDS | 40.0% |
!! | TCTTGGCTTGTTCAAGAGAA+CGG | - | chr2_1:21840170-21840189 | None:intergenic | 40.0% |
CCAACAAGGAGATATGTGTT+TGG | - | chr2_1:21840698-21840717 | None:intergenic | 40.0% | |
CCAAACACATATCTCCTTGT+TGG | + | chr2_1:21840695-21840714 | Msa0201070:CDS | 40.0% | |
TGAGATCACACACAAGTACA+AGG | + | chr2_1:21840730-21840749 | Msa0201070:CDS | 40.0% | |
GAGATCACACACAAGTACAA+GGG | + | chr2_1:21840731-21840750 | Msa0201070:CDS | 40.0% | |
! | TAGTTGATTCCACAAGCTCA+CGG | - | chr2_1:21840991-21841010 | None:intergenic | 40.0% |
TACTGCCTGCTATCATTACT+TGG | - | chr2_1:21841056-21841075 | None:intergenic | 40.0% | |
!!! | TGCGGGTTAATGGTTTTTTG+CGG | + | chr2_1:21841081-21841100 | Msa0201070:intron | 40.0% |
!!! | TAATGGTTTTTTGCGGACTG+CGG | + | chr2_1:21841088-21841107 | Msa0201070:intron | 40.0% |
ATTATTGAACCACTGTGCAG+TGG | - | chr2_1:21841142-21841161 | None:intergenic | 40.0% | |
ACTGCACAGTGGTTCAATAA+TGG | + | chr2_1:21841141-21841160 | Msa0201070:intron | 40.0% | |
CTGCACAGTGGTTCAATAAT+GGG | + | chr2_1:21841142-21841161 | Msa0201070:intron | 40.0% | |
! | TCTAGCTTCAAGTTCAGATG+TGG | + | chr2_1:21841188-21841207 | Msa0201070:intron | 40.0% |
GATTGCTTCTAGTGGTGAAT+AGG | + | chr2_1:21841279-21841298 | Msa0201070:intron | 40.0% | |
GGGAAAAGAAAATCTGGCAT+AGG | - | chr2_1:21841386-21841405 | None:intergenic | 40.0% | |
TTTCATCCTAACCAGTAAGG+GGG | + | chr2_1:21841492-21841511 | Msa0201070:intron | 40.0% | |
! | ATAAAACCCCCTTACTGGTT+AGG | - | chr2_1:21841501-21841520 | None:intergenic | 40.0% |
GTGAGTGACGTCTATGATAA+CGG | - | chr2_1:21841527-21841546 | None:intergenic | 40.0% | |
ATAGACGTCACTCACTTTGT+TGG | + | chr2_1:21841532-21841551 | Msa0201070:intron | 40.0% | |
TAGACGTCACTCACTTTGTT+GGG | + | chr2_1:21841533-21841552 | Msa0201070:intron | 40.0% | |
CACTTTGTTGGGTAATCGAA+TGG | + | chr2_1:21841544-21841563 | Msa0201070:intron | 40.0% | |
CAGCCGTAAGCAATTAAAAG+AGG | - | chr2_1:21841839-21841858 | None:intergenic | 40.0% | |
!! | CTTTTAATTGCTTACGGCTG+TGG | + | chr2_1:21841839-21841858 | Msa0201070:intron | 40.0% |
AACTCCTGATTGATTACCCA+CGG | - | chr2_1:21842137-21842156 | None:intergenic | 40.0% | |
!! | ACTGGGATTGGTTGATCTTA+CGG | - | chr2_1:21842203-21842222 | None:intergenic | 40.0% |
! | AATTATAGCTGGACTGGGAT+TGG | - | chr2_1:21842215-21842234 | None:intergenic | 40.0% |
CACTGTAGTTGTTGTGTCTA+AGG | - | chr2_1:21842325-21842344 | None:intergenic | 40.0% | |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr2_1:21842659-21842678 | None:intergenic | 40.0% |
GTGTGCTGAGTATTAATTGG+AGG | + | chr2_1:21842554-21842573 | Msa0201070:intron | 40.0% | |
!!! | GACACTCATTTTGAAACGGA+GGG | + | chr2_1:21842659-21842678 | Msa0201070:intron | 40.0% |
GTCATTCAATTCCGGCTTTA+AGG | - | chr2_1:21842918-21842937 | None:intergenic | 40.0% | |
GCCAGACAAGAAATATACTG+AGG | - | chr2_1:21843866-21843885 | None:intergenic | 40.0% | |
AAGGAAACAAAGAGGACTGA+AGG | + | chr2_1:21844002-21844021 | Msa0201070:CDS | 40.0% | |
CCAGATTACGCATTACATAC+TGG | - | chr2_1:21844073-21844092 | None:intergenic | 40.0% | |
CCAGTATGTAATGCGTAATC+TGG | + | chr2_1:21844070-21844089 | Msa0201070:CDS | 40.0% | |
GGATCGTGGTTATTCAAGAA+AGG | + | chr2_1:21844091-21844110 | Msa0201070:CDS | 40.0% | |
GGTTATTCAAGAAAGGAGCT+AGG | + | chr2_1:21844098-21844117 | Msa0201070:CDS | 40.0% | |
CATATGGGTAAGCAAAACAG+AGG | - | chr2_1:21844160-21844179 | None:intergenic | 40.0% | |
TTGTTTACTTTCTCGCATGC+TGG | + | chr2_1:21844212-21844231 | Msa0201070:intron | 40.0% | |
TGTTTACTTTCTCGCATGCT+GGG | + | chr2_1:21844213-21844232 | Msa0201070:intron | 40.0% | |
CATGGGACTTAAAAAGTTGC+AGG | + | chr2_1:21844292-21844311 | Msa0201070:CDS | 40.0% | |
AAGAAACAGCAAGAGACTGT+AGG | + | chr2_1:21844323-21844342 | Msa0201070:CDS | 40.0% | |
!!! | TGTTCAGTTTTGGGTTTGAG+AGG | + | chr2_1:21844620-21844639 | Msa0201070:intron | 40.0% |
!!! | GTTCAGTTTTGGGTTTGAGA+GGG | + | chr2_1:21844621-21844640 | Msa0201070:intron | 40.0% |
!! | GGTCATATTTCTAGGCAATG+TGG | - | chr2_1:21844659-21844678 | None:intergenic | 40.0% |
! | TCACCTTGTGAGATAGCTTT+TGG | + | chr2_1:21844709-21844728 | Msa0201070:intron | 40.0% |
ACTCCAAAAGCTATCTCACA+AGG | - | chr2_1:21844715-21844734 | None:intergenic | 40.0% | |
ACACACCTTAATGCTTACCA+CGG | - | chr2_1:21844843-21844862 | None:intergenic | 40.0% | |
ATACACATTTGCCTACGTTC+CGG | + | chr2_1:21844881-21844900 | Msa0201070:intron | 40.0% | |
ACACTCAAGACTGTAACATC+CGG | - | chr2_1:21844903-21844922 | None:intergenic | 40.0% | |
ATGTTACAGTCTTGAGTGTG+CGG | + | chr2_1:21844904-21844923 | Msa0201070:intron | 40.0% | |
AAGCCAAACTATGTGCAGAT+AGG | + | chr2_1:21845059-21845078 | Msa0201070:CDS | 40.0% | |
GTTCCTATCTGCACATAGTT+TGG | - | chr2_1:21845065-21845084 | None:intergenic | 40.0% | |
GAACAGTGAGAAGAATTGCT+GGG | + | chr2_1:21845081-21845100 | Msa0201070:CDS | 40.0% | |
! | AATGCAGATCGATTAGTTGC+TGG | + | chr2_1:21845128-21845147 | Msa0201070:CDS | 40.0% |
TGAAGAAGGATGCCACAAAA+TGG | + | chr2_1:21845166-21845185 | Msa0201070:CDS | 40.0% | |
! | AGAGAGATCCAACCATTTTG+TGG | - | chr2_1:21845181-21845200 | None:intergenic | 40.0% |
CCATCAGCATAAACACGAAC+AGG | - | chr2_1:21840117-21840136 | None:intergenic | 45.0% | |
CCTGTTCGTGTTTATGCTGA+TGG | + | chr2_1:21840114-21840133 | Msa0201070:CDS | 45.0% | |
!! | CTTGGCTTGTTCAAGAGAAC+GGG | - | chr2_1:21840169-21840188 | None:intergenic | 45.0% |
TCTCTTCGTCACTGCAAGTT+CGG | + | chr2_1:21840788-21840807 | Msa0201070:intron | 45.0% | |
! | CTTTTCTTTCCGTGAGCTTG+TGG | + | chr2_1:21840979-21840998 | Msa0201070:intron | 45.0% |
! | ATAGCAGGCAGTAGTTTGTG+CGG | + | chr2_1:21841063-21841082 | Msa0201070:intron | 45.0% |
! | CAGTAGTTTGTGCGGGTTAA+TGG | + | chr2_1:21841071-21841090 | Msa0201070:intron | 45.0% |
! | CACAGTGGTTCAATAATGGG+TGG | + | chr2_1:21841145-21841164 | Msa0201070:intron | 45.0% |
!! | TGGTTCAATAATGGGTGGTG+CGG | + | chr2_1:21841150-21841169 | Msa0201070:intron | 45.0% |
! | GTTTTACATTTCGGCGGTGT+GGG | + | chr2_1:21841220-21841239 | Msa0201070:intron | 45.0% |
GCTTCAACGATTGCTTCTAG+TGG | + | chr2_1:21841271-21841290 | Msa0201070:intron | 45.0% | |
CTTCTAGTGGTGAATAGGCT+AGG | + | chr2_1:21841284-21841303 | Msa0201070:intron | 45.0% | |
TAGGTGCGATGGCAATGAAA+TGG | + | chr2_1:21841303-21841322 | Msa0201070:intron | 45.0% | |
TCGAGAAGAAGCAAGCTTCA+GGG | - | chr2_1:21841356-21841375 | None:intergenic | 45.0% | |
GGAGAATAAAACCCCCTTAC+TGG | - | chr2_1:21841506-21841525 | None:intergenic | 45.0% | |
GATGAAGTGAACGGTGAGAT+TGG | + | chr2_1:21841630-21841649 | Msa0201070:intron | 45.0% | |
AGATCGTGTTTGCGGATAAC+TGG | + | chr2_1:21841730-21841749 | Msa0201070:intron | 45.0% | |
GGCGTCTTTCTGATTATGTC+TGG | + | chr2_1:21841792-21841811 | Msa0201070:intron | 45.0% | |
! | AGTTCAATTGCACTTGCTGC+AGG | + | chr2_1:21842084-21842103 | Msa0201070:intron | 45.0% |
AAGTTATTCCAGATGTGCCG+TGG | + | chr2_1:21842117-21842136 | Msa0201070:CDS | 45.0% | |
AGTTATTCCAGATGTGCCGT+GGG | + | chr2_1:21842118-21842137 | Msa0201070:CDS | 45.0% | |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr2_1:21842658-21842677 | None:intergenic | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | + | chr2_1:21842658-21842677 | Msa0201070:intron | 45.0% |
TGTGCAAACTATTCATGGCG+AGG | + | chr2_1:21843192-21843211 | Msa0201070:intron | 45.0% | |
TATGCTGATACAAGTGGAGC+TGG | + | chr2_1:21843649-21843668 | Msa0201070:CDS | 45.0% | |
TGATACAAGTGGAGCTGGAA+AGG | + | chr2_1:21843654-21843673 | Msa0201070:CDS | 45.0% | |
!!! | GTTTTTTTCTTCCCACCCTC+TGG | + | chr2_1:21843742-21843761 | Msa0201070:intron | 45.0% |
GTAATGCGTAATCTGGATCG+TGG | + | chr2_1:21844077-21844096 | Msa0201070:CDS | 45.0% | |
GCTAGGTGTTAGCTATGTCA+AGG | + | chr2_1:21844115-21844134 | Msa0201070:CDS | 45.0% | |
GCAAGAGACTGTAGGAAAGA+AGG | + | chr2_1:21844331-21844350 | Msa0201070:CDS | 45.0% | |
ATGTCCCGTGGTAAGCATTA+AGG | + | chr2_1:21844835-21844854 | Msa0201070:intron | 45.0% | |
CACACCTTAATGCTTACCAC+GGG | - | chr2_1:21844842-21844861 | None:intergenic | 45.0% | |
CGGCAGACCAATGAATTACT+AGG | + | chr2_1:21844924-21844943 | Msa0201070:intron | 45.0% | |
GGAACAGTGAGAAGAATTGC+TGG | + | chr2_1:21845080-21845099 | Msa0201070:CDS | 45.0% | |
TGGGATGAACCGTACTGAAT+GGG | + | chr2_1:21845100-21845119 | Msa0201070:CDS | 45.0% | |
GAAGGATGCCACAAAATGGT+TGG | + | chr2_1:21845170-21845189 | Msa0201070:intron | 45.0% | |
!! | CTATTAATAAAAAATATTAT+TGG | - | chr2_1:21844410-21844429 | None:intergenic | 5.0% |
CTTGTTCAAGAGAACGGGCA+TGG | - | chr2_1:21840164-21840183 | None:intergenic | 50.0% | |
CATCACTGCAGCATCCAACA+AGG | - | chr2_1:21840712-21840731 | None:intergenic | 50.0% | |
CGGGTCCAAGTAATGATAGC+AGG | + | chr2_1:21841048-21841067 | Msa0201070:intron | 50.0% | |
! | TAGCAGGCAGTAGTTTGTGC+GGG | + | chr2_1:21841064-21841083 | Msa0201070:intron | 50.0% |
CGGACTGCGGTTCAATTCAA+TGG | + | chr2_1:21841101-21841120 | Msa0201070:intron | 50.0% | |
! | GACAGTTTTCCACTGCACAG+TGG | + | chr2_1:21841130-21841149 | Msa0201070:intron | 50.0% |
!! | TTCAATAATGGGTGGTGCGG+TGG | + | chr2_1:21841153-21841172 | Msa0201070:intron | 50.0% |
! | GGTTTTACATTTCGGCGGTG+TGG | + | chr2_1:21841219-21841238 | Msa0201070:intron | 50.0% |
CTCGAGAAGAAGCAAGCTTC+AGG | - | chr2_1:21841357-21841376 | None:intergenic | 50.0% | |
TCGTGTTTGCGGATAACTGG+CGG | + | chr2_1:21841733-21841752 | Msa0201070:intron | 50.0% | |
ATTGCTTACGGCTGTGGAGT+AGG | + | chr2_1:21841845-21841864 | Msa0201070:intron | 50.0% | |
! | TCAATTGCACTTGCTGCAGG+TGG | + | chr2_1:21842087-21842106 | Msa0201070:intron | 50.0% |
! | CAATTGCACTTGCTGCAGGT+GGG | + | chr2_1:21842088-21842107 | Msa0201070:intron | 50.0% |
TTGATTACCCACGGCACATC+TGG | - | chr2_1:21842128-21842147 | None:intergenic | 50.0% | |
TGTGCCGTGGGTAATCAATC+AGG | + | chr2_1:21842130-21842149 | Msa0201070:CDS | 50.0% | |
TGTGTGTGTATGTGCACGTG+CGG | - | chr2_1:21842827-21842846 | None:intergenic | 50.0% | |
GATGAATGACACCAGAGGGT+GGG | - | chr2_1:21843756-21843775 | None:intergenic | 50.0% | |
AGATGAATGACACCAGAGGG+TGG | - | chr2_1:21843757-21843776 | None:intergenic | 50.0% | |
GGTAAGCAAAACAGAGGAGC+TGG | - | chr2_1:21844154-21844173 | None:intergenic | 50.0% | |
TTACTTTCTCGCATGCTGGG+AGG | + | chr2_1:21844216-21844235 | Msa0201070:intron | 50.0% | |
! | TTCATGCTCTAGATGTCCCG+TGG | + | chr2_1:21844823-21844842 | Msa0201070:intron | 50.0% |
GACTGTAACATCCGGAACGT+AGG | - | chr2_1:21844895-21844914 | None:intergenic | 50.0% | |
CTGGGATGAACCGTACTGAA+TGG | + | chr2_1:21845099-21845118 | Msa0201070:CDS | 50.0% | |
GGTGAATAGGCTAGGTGCGA+TGG | + | chr2_1:21841292-21841311 | Msa0201070:intron | 55.0% | |
CAGGGCTCTCGAAGACAACA+AGG | - | chr2_1:21841338-21841357 | None:intergenic | 55.0% | |
GGATAACGCCCCCTTTACTG+AGG | - | chr2_1:21843230-21843249 | None:intergenic | 55.0% | |
TGGGTGGTGCGGTGGATCTG+TGG | + | chr2_1:21841161-21841180 | Msa0201070:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 21839930 | 21845315 | 21839930 | ID=Msa0201070;Name=Msa0201070 |
chr2_1 | mRNA | 21839930 | 21845315 | 21839930 | ID=Msa0201070-mRNA-1;Parent=Msa0201070;Name=Msa0201070-mRNA-1;_AED=0.16;_eAED=0.16;_QI=142|0.71|0.75|0.87|0.85|0.87|8|0|252 |
chr2_1 | exon | 21839930 | 21840193 | 21839930 | ID=Msa0201070-mRNA-1:exon:8778;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21840691 | 21840804 | 21840691 | ID=Msa0201070-mRNA-1:exon:8779;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21842106 | 21842201 | 21842106 | ID=Msa0201070-mRNA-1:exon:8780;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21843648 | 21843690 | 21843648 | ID=Msa0201070-mRNA-1:exon:8781;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21843981 | 21844136 | 21843981 | ID=Msa0201070-mRNA-1:exon:8782;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21844272 | 21844352 | 21844272 | ID=Msa0201070-mRNA-1:exon:8783;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21845044 | 21845187 | 21845044 | ID=Msa0201070-mRNA-1:exon:8784;Parent=Msa0201070-mRNA-1 |
chr2_1 | exon | 21845313 | 21845315 | 21845313 | ID=Msa0201070-mRNA-1:exon:8785;Parent=Msa0201070-mRNA-1 |
chr2_1 | five_prime_UTR | 21839930 | 21840071 | 21839930 | ID=Msa0201070-mRNA-1:five_prime_utr;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21840072 | 21840193 | 21840072 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21840691 | 21840804 | 21840691 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21842106 | 21842201 | 21842106 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21843648 | 21843690 | 21843648 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21843981 | 21844136 | 21843981 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21844272 | 21844352 | 21844272 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21845044 | 21845187 | 21845044 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
chr2_1 | CDS | 21845313 | 21845315 | 21845313 | ID=Msa0201070-mRNA-1:cds;Parent=Msa0201070-mRNA-1 |
Gene Sequence |
Protein sequence |