AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807470 MtrunA17_Chr5g0421111 95.550 382 16 1 1 381 1 382 0.0 686
Msa0807470 MtrunA17_Chr8g0365941 51.289 388 116 13 1 381 1 322 2.24e-104 316
Msa0807470 MtrunA17_Chr7g0234761 28.195 266 109 9 139 381 128 334 2.73e-12 68.2
Msa0807470 MtrunA17_Chr8g0339091 29.615 260 121 12 140 381 93 308 3.16e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807470 AT1G68920.3 35.476 389 171 15 1 381 3 319 1.10e-46 167
Msa0807470 AT1G68920.1 35.385 390 171 16 1 381 3 320 5.93e-45 162
Msa0807470 AT1G68920.4 35.385 390 171 16 1 381 3 320 5.93e-45 162
Msa0807470 AT1G68920.2 35.385 390 171 16 1 381 3 320 5.93e-45 162
Msa0807470 AT1G26260.4 31.250 272 86 12 112 381 68 240 5.18e-17 82.4
Msa0807470 AT1G26260.1 31.250 272 86 12 112 381 68 240 5.18e-17 82.4
Msa0807470 AT1G26260.6 31.250 272 86 12 112 381 68 240 5.18e-17 82.4
Msa0807470 AT1G26260.2 31.250 272 86 12 112 381 68 240 5.18e-17 82.4
Msa0807470 AT1G26260.5 31.356 236 83 11 148 381 60 218 1.02e-12 69.3
Msa0807470 AT1G26260.3 37.984 129 53 4 253 381 88 189 1.33e-11 65.9

Find 203 sgRNAs with CRISPR-Local

Find 648 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTTCTATTATGATAATT+TGG 0.189854 5_3:+28863929 Msa0807470:five_prime_UTR
TCTCAGTTTCCTACTGATTC+TGG 0.189881 5_3:+28864646 Msa0807470:CDS
CTTCACTACATCGCATATTT+TGG 0.196920 5_3:+28867130 Msa0807470:three_prime_UTR
CTTCAAATACAATTGGAATT+AGG 0.207807 5_3:+28864491 Msa0807470:CDS
ATTCATTTAGTCCTAACTTT+TGG 0.247762 5_3:+28864416 Msa0807470:CDS
AGTAGCACAGGATCAGAAAA+TGG 0.263641 5_3:+28863659 Msa0807470:five_prime_UTR
TTGTAGTTCTTGAGCTCTAC+TGG 0.277673 5_3:-28865240 None:intergenic
AGGAAAGATGGGTTTGGTTT+TGG 0.287046 5_3:+28864511 Msa0807470:CDS
AGTGATGTGGTGAACGCTTA+TGG 0.287839 5_3:+28864718 Msa0807470:CDS
TCTGTTGGGTTGGTTTCAAT+TGG 0.290470 5_3:+28864325 Msa0807470:CDS
GATCATGGAACACTTGAAAT+TGG 0.303398 5_3:+28864547 Msa0807470:CDS
TCACCCTTCTGTTGGTTCTC+AGG 0.306928 5_3:-28865284 None:intergenic
CAATGGATCAATACCTGATT+TGG 0.309027 5_3:-28866491 None:intergenic
GCTGCGAGGTTCTCGTGTTT+TGG 0.317332 5_3:+28864682 Msa0807470:CDS
CACCCTTCTGTTGGTTCTCA+GGG 0.326528 5_3:-28865283 None:intergenic
AGTTCGACAATGAAGGCTTC+TGG 0.338562 5_3:+28865317 Msa0807470:CDS
TTCTGGGAAGAATGCCAAAC+AGG 0.341010 5_3:+28865334 Msa0807470:CDS
GAGTTTAGTCCTTTCATAGA+AGG 0.345035 5_3:-28865090 None:intergenic
AGGAGGAATACATACATGTT+AGG 0.351599 5_3:+28865381 Msa0807470:CDS
ATGCCACCTGATTGGAGATT+TGG 0.358034 5_3:+28864292 Msa0807470:CDS
AATTTGGTACTTACAAGCTT+TGG 0.358624 5_3:+28863945 Msa0807470:five_prime_UTR
TTGCCAAACTTGAAGGCCTT+GGG 0.360091 5_3:+28867204 Msa0807470:three_prime_UTR
GGAACTAGGGATGCTCTTGC+AGG 0.361664 5_3:+28864781 Msa0807470:CDS
ATTTACTGTTGCAAGTTTCA+TGG 0.362132 5_3:-28866136 None:intergenic
TCGGACGGGTTTGCCATGTT+TGG 0.369494 5_3:-28866410 None:intergenic
GGGAGTTCTTCAAATACAAT+TGG 0.377973 5_3:+28864484 Msa0807470:CDS
CTGTTGGGTTGGTTTCAATT+GGG 0.381869 5_3:+28864326 Msa0807470:CDS
ACAATTGGAATTAGGAAAGA+TGG 0.383879 5_3:+28864499 Msa0807470:CDS
ACACGACTTGCCAAACTTGA+AGG 0.397048 5_3:+28867197 Msa0807470:three_prime_UTR
TACCAAATTATCATAATAGA+AGG 0.405256 5_3:-28863931 None:intergenic
GATGAATGGTCCCAAAAGTT+AGG 0.406641 5_3:-28864427 None:intergenic
TAGTAGTACCTTCCAACATT+GGG 0.407959 5_3:-28865059 None:intergenic
GCTAAACTCGTGTGAACATT+TGG 0.408991 5_3:+28863979 Msa0807470:five_prime_UTR
ATGTATGCCGGTTCAATTCA+TGG 0.409773 5_3:+28864760 Msa0807470:CDS
GAAGCCTTCATTGTCGAACT+TGG 0.410547 5_3:-28865314 None:intergenic
GGAAGAGGTGGTCATGATCA+TGG 0.417148 5_3:+28864532 Msa0807470:CDS
TGATTCCGACAGAGGTGAAT+CGG 0.417204 5_3:+28864999 Msa0807470:CDS
ACATGTATGTATTCCTCCTT+AGG 0.418893 5_3:-28865377 None:intergenic
GAATGATAAAAGCGAGGGTC+GGG 0.422825 5_3:+28864930 Msa0807470:CDS
CAGATGACTGGATGTAGGTC+AGG 0.426506 5_3:+28867243 Msa0807470:three_prime_UTR
TCATTGTCGAACTTGGTTGT+TGG 0.430666 5_3:-28865307 None:intergenic
ATGGAACACTTGAAATTGGT+TGG 0.432972 5_3:+28864551 Msa0807470:CDS
AGCTCGTCCGCCCACACATC+AGG 0.433940 5_3:-28866759 None:intergenic
ATAATTTGAGTGGAAAGAAA+AGG 0.434864 5_3:-28863456 None:intergenic
GTTCGACAATGAAGGCTTCT+GGG 0.438253 5_3:+28865318 Msa0807470:CDS
CGGGCCGGGTCTCAAGATGA+AGG 0.439323 5_3:+28864949 Msa0807470:CDS
ACCTACATCCAGTCATCTGC+AGG 0.440155 5_3:-28867239 None:intergenic
GGAATTAGGAAAGATGGGTT+TGG 0.441151 5_3:+28864505 Msa0807470:CDS
CTTGCCAAACTTGAAGGCCT+TGG 0.445232 5_3:+28867203 Msa0807470:three_prime_UTR
GTCACCATCTGTTGAGCAAT+TGG 0.446286 5_3:+28864885 Msa0807470:CDS
CATACATGTTAGGGCTCGCC+GGG 0.446826 5_3:+28865391 Msa0807470:CDS
CAATTGGAATTAGGAAAGAT+GGG 0.455462 5_3:+28864500 Msa0807470:CDS
ATCATGTTCATCTGCCTCAA+TGG 0.455578 5_3:+28864390 Msa0807470:CDS
TCTTTCTTTCTTTAGGGAGG+GGG 0.456830 5_3:+28863905 Msa0807470:intron
CTTTCATCATAGTATTAGCC+TGG 0.456862 5_3:-28864576 None:intergenic
ACCGTTGAGTGGAGGATTCA+AGG 0.457519 5_3:+28866466 Msa0807470:three_prime_UTR
TCTCTCTAAAAGGGAACTGC+AGG 0.458487 5_3:+28863554 Msa0807470:five_prime_UTR
GTAGCTGCTTCAACCACATT+CGG 0.459711 5_3:-28864853 None:intergenic
GTACTTACAAGCTTTGGAAA+TGG 0.461968 5_3:+28863951 Msa0807470:five_prime_UTR
CCGGTTCAATTCATGGAACT+AGG 0.462018 5_3:+28864767 Msa0807470:CDS
AATAGTTCTTCGAAGGATAT+CGG 0.462281 5_3:-28866429 None:intergenic
TGCAAATTCATCTGTTGGGT+TGG 0.463783 5_3:+28864315 Msa0807470:CDS
GTTGTTGGTCACCCTTCTGT+TGG 0.463868 5_3:-28865292 None:intergenic
GTGATGTGGTGAACGCTTAT+GGG 0.464781 5_3:+28864719 Msa0807470:CDS
AGGCTAATACTATGATGAAA+GGG 0.468185 5_3:+28864578 Msa0807470:CDS
TTACCCTCTCTGCAAGGCTA+TGG 0.472298 5_3:-28865430 None:intergenic
CAGCCATAGCCTTGCAGAGA+GGG 0.475539 5_3:+28865427 Msa0807470:CDS
CCTAGTTCCATGAATTGAAC+CGG 0.480473 5_3:-28864767 None:intergenic
AGGATTCAAGGAGCCAAATC+AGG 0.482445 5_3:+28866478 Msa0807470:three_prime_UTR
TTTGCACCAAATCTCCAATC+AGG 0.483200 5_3:-28864298 None:intergenic
AGTTTGTACCATCCACATCT+TGG 0.483306 5_3:-28866830 None:intergenic
CTTCCCTTCATCTTGAGACC+CGG 0.484549 5_3:-28864953 None:intergenic
AGTCACACCCTGCAGATGAC+TGG 0.488564 5_3:+28867231 Msa0807470:three_prime_UTR
TTTGGTGCAAATTCATCTGT+TGG 0.488720 5_3:+28864310 Msa0807470:CDS
ATCCACATCTTGGCTACTCA+TGG 0.492286 5_3:-28866820 None:intergenic
GGAGGAATACATACATGTTA+GGG 0.492603 5_3:+28865382 Msa0807470:CDS
CTTTCTTTCTTTAGGGAGGG+GGG 0.494041 5_3:+28863906 Msa0807470:intron
GATAAAAGCGAGGGTCGGGC+CGG 0.496645 5_3:+28864934 Msa0807470:CDS
AAGGACTAAACTCGAAGAAA+AGG 0.496988 5_3:+28865100 Msa0807470:CDS
TAATTTGAGTGGAAAGAAAA+GGG 0.497623 5_3:-28863455 None:intergenic
CAATCCATGGCGATGTATGC+CGG 0.498492 5_3:+28864748 Msa0807470:CDS
AAAGAAAAGTTTGAGGTGGA+TGG 0.498732 5_3:+28864235 Msa0807470:CDS
GATTCCGACAGAGGTGAATC+GGG 0.499637 5_3:+28865000 Msa0807470:CDS
AATTATACTAGTTAGTACTT+TGG 0.501048 5_3:+28863473 Msa0807470:five_prime_UTR
TGTAGTTCTTGAGCTCTACT+GGG 0.503445 5_3:-28865239 None:intergenic
AACTTACATCTTTAGCAAGA+AGG 0.504065 5_3:-28866185 None:intergenic
TTGGTGCAAATTCATCTGTT+GGG 0.505316 5_3:+28864311 Msa0807470:CDS
CAGATTCTTCACCAACGGCC+TGG 0.510859 5_3:+28866296 Msa0807470:intron
ATACCACTAGAATAACTCAT+AGG 0.511749 5_3:-28864271 None:intergenic
CTAGTGGTATGCCACCTGAT+TGG 0.512379 5_3:+28864284 Msa0807470:CDS
ACATACATGTTAGGGCTCGC+CGG 0.516335 5_3:+28865390 Msa0807470:CDS
CAGGCTAATACTATGATGAA+AGG 0.519931 5_3:+28864577 Msa0807470:CDS
GTAGCACAGGATCAGAAAAT+GGG 0.521827 5_3:+28863660 Msa0807470:five_prime_UTR
ATTCTATGAGTATGAATAGA+GGG 0.526004 5_3:+28864350 Msa0807470:CDS
CAGGGTGCTAAAAGTAGCAC+AGG 0.526054 5_3:+28863647 Msa0807470:five_prime_UTR
GAGTGGAAAGAAAAGGGTAA+TGG 0.526119 5_3:-28863449 None:intergenic
GTGGTTGAAGCAGCTACAAA+AGG 0.527400 5_3:+28864859 Msa0807470:CDS
TGTTGATGTTTGCAGGTCAC+TGG 0.529088 5_3:+28865681 Msa0807470:intron
AATTCTATGAGTATGAATAG+AGG 0.529332 5_3:+28864349 Msa0807470:CDS
TGCTTTAGATGCCTGATGTG+TGG 0.531312 5_3:+28866748 Msa0807470:intron
GCATACATCGCCATGGATTG+AGG 0.532580 5_3:-28864745 None:intergenic
CCTAGTGTGGATGAAGGACC+AGG 0.537537 5_3:-28866314 None:intergenic
CTAGTAGTACCTTCCAACAT+TGG 0.537550 5_3:-28865060 None:intergenic
GCTCAAGAACTACAAAATGA+AGG 0.537868 5_3:+28865248 Msa0807470:CDS
CCTGGTTGAGATGGATGTAA+TGG 0.538930 5_3:-28866368 None:intergenic
ACAACCAAGTTCGACAATGA+AGG 0.539816 5_3:+28865310 Msa0807470:CDS
GGCTGTTTGTTGCTTGACCC+CGG 0.540075 5_3:-28865409 None:intergenic
TGAATCATCCCTGGTTGAGA+TGG 0.540521 5_3:-28866377 None:intergenic
GGATCATCACTCTCTTGTGT+TGG 0.542048 5_3:-28864832 None:intergenic
ACAAGATGGTTCCCCAATGT+TGG 0.543943 5_3:+28865047 Msa0807470:CDS
ATAAAAGCGAGGGTCGGGCC+GGG 0.545728 5_3:+28864935 Msa0807470:CDS
TTCAAGTTTGGCAAGTCGTG+TGG 0.546672 5_3:-28867195 None:intergenic
TGCAACAGTAAATCCACGGC+TGG 0.549394 5_3:+28866146 Msa0807470:CDS
GGTGACGATGATGGTGGTCG+TGG 0.549709 5_3:+28865021 Msa0807470:CDS
ATGTATCATATGTTTAGAAG+TGG 0.550288 5_3:+28867310 Msa0807470:three_prime_UTR
TCAAAATTCTGATCCACCTA+AGG 0.553749 5_3:+28865361 Msa0807470:CDS
TTCATCGAATTCACAAAACA+TGG 0.554963 5_3:+28864444 Msa0807470:CDS
CCATTACATCCATCTCAACC+AGG 0.557186 5_3:+28866368 Msa0807470:three_prime_UTR
CCTGGTCCTTCATCCACACT+AGG 0.558930 5_3:+28866314 Msa0807470:three_prime_UTR
TCAATAAAACCAGAATCAGT+AGG 0.559673 5_3:-28864655 None:intergenic
CTCACTATGTTCGATCAACC+AGG 0.560988 5_3:+28867395 Msa0807470:three_prime_UTR
TTTCTTTCTTTAGGGAGGGG+GGG 0.561280 5_3:+28863907 Msa0807470:intron
CGGTTCAATTCATGGAACTA+GGG 0.563315 5_3:+28864768 Msa0807470:CDS
GAGTGACAAAGAAAAGTTTG+AGG 0.565967 5_3:+28864228 Msa0807470:CDS
GTTTGAGGTGGATGGAAATG+AGG 0.566256 5_3:+28864243 Msa0807470:CDS
ACTTGAAATTGGTTGGAACC+AGG 0.567324 5_3:+28864558 Msa0807470:CDS
AGTGGAGAGCCTTCTATGAA+AGG 0.567968 5_3:+28865081 Msa0807470:CDS
GTTAGACTTCGAGTAGCAAA+TGG 0.569191 5_3:+28864805 Msa0807470:CDS
TAATTAAAGAATGTAAAGAC+AGG 0.569802 5_3:+28867370 Msa0807470:three_prime_UTR
TCCTTGAATCCTCCACTCAA+CGG 0.571453 5_3:-28866467 None:intergenic
GCTTTAGATGCCTGATGTGT+GGG 0.574539 5_3:+28866749 Msa0807470:intron
TCAATCAGTGATTCCAAACA+TGG 0.574687 5_3:+28866397 Msa0807470:three_prime_UTR
TTATGGGGTTCCTCAATCCA+TGG 0.575365 5_3:+28864735 Msa0807470:CDS
TTCTTCGAAGGATATCGGAC+GGG 0.577452 5_3:-28866424 None:intergenic
GGTGGTCGTGGTGGACAAGA+TGG 0.579347 5_3:+28865033 Msa0807470:CDS
TGGAGGGAATTTCAGTGATG+TGG 0.581243 5_3:+28864705 Msa0807470:CDS
GACGATGATGGTGGTCGTGG+TGG 0.581766 5_3:+28865024 Msa0807470:CDS
TGCCAAACTTGAAGGCCTTG+GGG 0.583248 5_3:+28867205 Msa0807470:three_prime_UTR
GGAAATCCTAGTGTGGATGA+AGG 0.585198 5_3:-28866320 None:intergenic
ACTAACTAGTATAATTTGAG+TGG 0.587804 5_3:-28863466 None:intergenic
ATGTTGGAAGGTACTACTAG+TGG 0.587812 5_3:+28865063 Msa0807470:CDS
TCCACATCTTGGCTACTCAT+GGG 0.588110 5_3:-28866819 None:intergenic
GGTGAATCGGGTGACGATGA+TGG 0.589027 5_3:+28865012 Msa0807470:CDS
ATGTTCATCTGCCTCAATGG+TGG 0.595175 5_3:+28864393 Msa0807470:CDS
ATCACTGATTGAATCATCCC+TGG 0.597295 5_3:-28866386 None:intergenic
TTGTCAGATGGAAATAACTA+CGG 0.604368 5_3:+28867162 Msa0807470:three_prime_UTR
GATGGTTCCCCAATGTTGGA+AGG 0.604783 5_3:+28865051 Msa0807470:CDS
TGAGGTGGATGGAAATGAGG+AGG 0.606986 5_3:+28864246 Msa0807470:CDS
GTGTATGAATAGTTCTTCGA+AGG 0.607675 5_3:-28866436 None:intergenic
TGTATGTATTCCTCCTTAGG+TGG 0.609034 5_3:-28865374 None:intergenic
GCCAAACTTGAAGGCCTTGG+GGG 0.610156 5_3:+28867206 Msa0807470:three_prime_UTR
TCTGGGAAGAATGCCAAACA+GGG 0.611782 5_3:+28865335 Msa0807470:CDS
AAATTCTGATCCACCTAAGG+AGG 0.612050 5_3:+28865364 Msa0807470:CDS
TTTCATCTGATTTGCTGCCG+TGG 0.612141 5_3:-28867075 None:intergenic
GTAGCCAATTGCTCAACAGA+TGG 0.612683 5_3:-28864889 None:intergenic
ACTACAAAATGAAGGTGCAA+AGG 0.613275 5_3:+28865256 Msa0807470:CDS
AGAATGATAAAAGCGAGGGT+CGG 0.617597 5_3:+28864929 Msa0807470:CDS
ACTGTCAGATTCTTCACCAA+CGG 0.618604 5_3:+28866291 Msa0807470:intron
GGCTAATACTATGATGAAAG+GGG 0.619493 5_3:+28864579 Msa0807470:CDS
AAAGAAAAGGGTAATGGCAA+AGG 0.619680 5_3:-28863443 None:intergenic
TTTGAAGAATGATAAAAGCG+AGG 0.619913 5_3:+28864924 Msa0807470:CDS
AAATGCTATAGAATTTCACC+TGG 0.620384 5_3:-28867413 None:intergenic
TCATCGAATTCACAAAACAT+GGG 0.621048 5_3:+28864445 Msa0807470:CDS
GTTCTTCGAAGGATATCGGA+CGG 0.621658 5_3:-28866425 None:intergenic
AATACTATGATGAAAGGGGA+TGG 0.621850 5_3:+28864583 Msa0807470:CDS
ACACAGTTAACACCGTTGAG+TGG 0.622575 5_3:+28866455 Msa0807470:three_prime_UTR
AATGTTAATGATTCCGACAG+AGG 0.622946 5_3:+28864991 Msa0807470:CDS
CAACCCTGAGAACCAACAGA+AGG 0.624229 5_3:+28865280 Msa0807470:CDS
TTGAAGAATGATAAAAGCGA+GGG 0.626379 5_3:+28864925 Msa0807470:CDS
TTCTATGAGTATGAATAGAG+GGG 0.627112 5_3:+28864351 Msa0807470:CDS
CAGTTAACACCGTTGAGTGG+AGG 0.628541 5_3:+28866458 Msa0807470:three_prime_UTR
AAATTCATTGACATCTCTAG+AGG 0.629470 5_3:-28866341 None:intergenic
GTCACCCGATTCACCTCTGT+CGG 0.629653 5_3:-28865004 None:intergenic
ACTAAATGAATCCACCATTG+AGG 0.630467 5_3:-28864404 None:intergenic
AACTTGCAACAGTAAATCCA+CGG 0.632130 5_3:+28866142 Msa0807470:CDS
CTCTAGAGGAAATCCTAGTG+TGG 0.634071 5_3:-28866327 None:intergenic
AGATGACTGGATGTAGGTCA+GGG 0.639146 5_3:+28867244 Msa0807470:three_prime_UTR
ATGAGTAGCCAAGATGTGGA+TGG 0.639201 5_3:+28866822 Msa0807470:three_prime_UTR
TGAACCGGCATACATCGCCA+TGG 0.640711 5_3:-28864752 None:intergenic
AACCCTGAGAACCAACAGAA+GGG 0.641900 5_3:+28865281 Msa0807470:CDS
TGTATCTTACCCTCTCTGCA+AGG 0.651874 5_3:-28865436 None:intergenic
TGACAAAGAAAAGTTTGAGG+TGG 0.652348 5_3:+28864231 Msa0807470:CDS
GGGCCGGGTCTCAAGATGAA+GGG 0.654605 5_3:+28864950 Msa0807470:CDS
TGATGTGGTGAACGCTTATG+GGG 0.657341 5_3:+28864720 Msa0807470:CDS
AAAAGCTTCAATAGAAGACA+GGG 0.657820 5_3:+28863629 Msa0807470:five_prime_UTR
TGGATGAAGGACCAGGCCGT+TGG 0.658029 5_3:-28866307 None:intergenic
GCACCAAATCTCCAATCAGG+TGG 0.660162 5_3:-28864295 None:intergenic
TCCCATGAGTAGCCAAGATG+TGG 0.669295 5_3:+28866818 Msa0807470:three_prime_UTR
CCCTGCAGATGACTGGATGT+AGG 0.672700 5_3:+28867238 Msa0807470:three_prime_UTR
AGTAGTACCTTCCAACATTG+GGG 0.673147 5_3:-28865058 None:intergenic
GATCCTATGAGTTATTCTAG+TGG 0.678062 5_3:+28864268 Msa0807470:CDS
TTAGATGCCTGATGTGTGGG+CGG 0.683943 5_3:+28866752 Msa0807470:intron
CATTACATCCATCTCAACCA+GGG 0.684099 5_3:+28866369 Msa0807470:three_prime_UTR
GGTTGAGATGGATGTAATGG+AGG 0.685510 5_3:-28866365 None:intergenic
TCAATATTGAAATCCAGCCG+TGG 0.686618 5_3:-28866159 None:intergenic
AGACTTCGAGTAGCAAATGG+AGG 0.689394 5_3:+28864808 Msa0807470:CDS
CCTACATCCAGTCATCTGCA+GGG 0.694533 5_3:-28867238 None:intergenic
AGAGAGTGATGATCCGAATG+TGG 0.704038 5_3:+28864840 Msa0807470:CDS
GGAAACTGAGATAAACTCTG+AGG 0.706311 5_3:-28864634 None:intergenic
ACACGCTCTTGTAGGTACCA+CGG 0.719344 5_3:+28867058 Msa0807470:intron
GAATCGGGTGACGATGATGG+TGG 0.722378 5_3:+28865015 Msa0807470:CDS
ACAGCCATAGCCTTGCAGAG+AGG 0.735764 5_3:+28865426 Msa0807470:CDS
ATACATGTTAGGGCTCGCCG+GGG 0.776140 5_3:+28865392 Msa0807470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCATTTAAAAAAAAAACT+TGG + chr5_3:28863736-28863755 Msa0807470:intron 10.0%
!! TTCATTTAAAAAAAAAACTT+GGG + chr5_3:28863737-28863756 Msa0807470:intron 10.0%
!! TTTCATTTAAAAAAAAAACT+TGG + chr5_3:28863736-28863755 Msa0807470:intron 10.0%
!! TTCATTTAAAAAAAAAACTT+GGG + chr5_3:28863737-28863756 Msa0807470:intron 10.0%
!! AATTATACTAGTTAGTACTT+TGG + chr5_3:28863473-28863492 Msa0807470:five_prime_UTR 20.0%
!!! TTAATTTAGGCGAATTTTTA+AGG - chr5_3:28863511-28863530 None:intergenic 20.0%
!!! TAAGCTTGGATTTTTAATTT+AGG - chr5_3:28863524-28863543 None:intergenic 20.0%
!! CTAACTTTAAATGAAAAAGT+AGG - chr5_3:28863698-28863717 None:intergenic 20.0%
!!! CTACTTTTTCATTTAAAGTT+AGG + chr5_3:28863696-28863715 Msa0807470:intron 20.0%
!! TACCAAATTATCATAATAGA+AGG - chr5_3:28863934-28863953 None:intergenic 20.0%
!! TAAATTATGTCTTGTGAAAA+TGG + chr5_3:28865463-28865482 Msa0807470:intron 20.0%
!! TGTGAAAATGGAAAATAATT+TGG + chr5_3:28865475-28865494 Msa0807470:intron 20.0%
!!! TTGGATGAAAAATTTTAAAC+TGG + chr5_3:28865494-28865513 Msa0807470:intron 20.0%
!! AACATGAATAAATATGCAAA+GGG - chr5_3:28866074-28866093 None:intergenic 20.0%
!! TAACATGAATAAATATGCAA+AGG - chr5_3:28866075-28866094 None:intergenic 20.0%
!!! TAAGCATTTTTTTTTCTAAC+CGG - chr5_3:28866228-28866247 None:intergenic 20.0%
!! AATAAAAAACCACAGATTTA+TGG + chr5_3:28866604-28866623 Msa0807470:intron 20.0%
!! TAATTAAAGAATGTAAAGAC+AGG + chr5_3:28867370-28867389 Msa0807470:three_prime_UTR 20.0%
!! AATTATACTAGTTAGTACTT+TGG + chr5_3:28863473-28863492 Msa0807470:five_prime_UTR 20.0%
!!! TTAATTTAGGCGAATTTTTA+AGG - chr5_3:28863511-28863530 None:intergenic 20.0%
!!! TAAGCTTGGATTTTTAATTT+AGG - chr5_3:28863524-28863543 None:intergenic 20.0%
!! CTAACTTTAAATGAAAAAGT+AGG - chr5_3:28863698-28863717 None:intergenic 20.0%
!!! CTACTTTTTCATTTAAAGTT+AGG + chr5_3:28863696-28863715 Msa0807470:intron 20.0%
!! TACCAAATTATCATAATAGA+AGG - chr5_3:28863934-28863953 None:intergenic 20.0%
!! TAAATTATGTCTTGTGAAAA+TGG + chr5_3:28865463-28865482 Msa0807470:intron 20.0%
!! TGTGAAAATGGAAAATAATT+TGG + chr5_3:28865475-28865494 Msa0807470:intron 20.0%
!!! TTGGATGAAAAATTTTAAAC+TGG + chr5_3:28865494-28865513 Msa0807470:intron 20.0%
!! AACATGAATAAATATGCAAA+GGG - chr5_3:28866074-28866093 None:intergenic 20.0%
!! TAACATGAATAAATATGCAA+AGG - chr5_3:28866075-28866094 None:intergenic 20.0%
!!! TAAGCATTTTTTTTTCTAAC+CGG - chr5_3:28866228-28866247 None:intergenic 20.0%
!! AATAAAAAACCACAGATTTA+TGG + chr5_3:28866604-28866623 Msa0807470:intron 20.0%
!! TAATTAAAGAATGTAAAGAC+AGG + chr5_3:28867370-28867389 Msa0807470:three_prime_UTR 20.0%
!! TAAGTATTTTACAATAGCAG+TGG + chr5_3:28863351-28863370 Msa0807470:five_prime_UTR 25.0%
! TAATTTGAGTGGAAAGAAAA+GGG - chr5_3:28863458-28863477 None:intergenic 25.0%
! ATAATTTGAGTGGAAAGAAA+AGG - chr5_3:28863459-28863478 None:intergenic 25.0%
! ACTAACTAGTATAATTTGAG+TGG - chr5_3:28863469-28863488 None:intergenic 25.0%
!! TAGATTTTTCTCTCTCTAAA+AGG + chr5_3:28863544-28863563 Msa0807470:five_prime_UTR 25.0%
!!! AGATTTTTCTCTCTCTAAAA+GGG + chr5_3:28863545-28863564 Msa0807470:five_prime_UTR 25.0%
!!! AATAAAGTGCTTTTGATTTG+TGG + chr5_3:28863603-28863622 Msa0807470:five_prime_UTR 25.0%
!!! ATAAAGTGCTTTTGATTTGT+GGG + chr5_3:28863604-28863623 Msa0807470:five_prime_UTR 25.0%
! GTCCTTCTATTATGATAATT+TGG + chr5_3:28863929-28863948 Msa0807470:five_prime_UTR 25.0%
! ATAGTAGAAAGTGAAGAAAA+GGG - chr5_3:28864112-28864131 None:intergenic 25.0%
! TATAGTAGAAAGTGAAGAAA+AGG - chr5_3:28864113-28864132 None:intergenic 25.0%
! AATTCTATGAGTATGAATAG+AGG + chr5_3:28864349-28864368 Msa0807470:CDS 25.0%
! ATTCTATGAGTATGAATAGA+GGG + chr5_3:28864350-28864369 Msa0807470:CDS 25.0%
!! ATTCATTTAGTCCTAACTTT+TGG + chr5_3:28864416-28864435 Msa0807470:CDS 25.0%
!! TTCATTTAGTCCTAACTTTT+GGG + chr5_3:28864417-28864436 Msa0807470:CDS 25.0%
! CTTCAAATACAATTGGAATT+AGG + chr5_3:28864491-28864510 Msa0807470:CDS 25.0%
!!! TGATTCTGGTTTTATTGAAA+GGG + chr5_3:28864660-28864679 Msa0807470:CDS 25.0%
!!! TTTTGAGCTTTATTTTGTTG+TGG + chr5_3:28865152-28865171 Msa0807470:intron 25.0%
!!! TTTGAGCTTTATTTTGTTGT+GGG + chr5_3:28865153-28865172 Msa0807470:intron 25.0%
! TAAATCATACTGAATTTCTC+TGG - chr5_3:28865617-28865636 None:intergenic 25.0%
!!! ATTAATTTGTTGATGTTTGC+AGG + chr5_3:28865674-28865693 Msa0807470:intron 25.0%
! AAGTAGAACTAAAACATACA+GGG - chr5_3:28865838-28865857 None:intergenic 25.0%
! TTAAGTACATGTTAAAGTGT+TGG - chr5_3:28865919-28865938 None:intergenic 25.0%
! CACGATTAACATTCAAAATT+AGG - chr5_3:28865947-28865966 None:intergenic 25.0%
!! AACATGTAAAAGAAAGTACA+TGG - chr5_3:28866681-28866700 None:intergenic 25.0%
!! GTACTTTCTTTTACATGTTT+CGG + chr5_3:28866682-28866701 Msa0807470:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr5_3:28866875-28866894 None:intergenic 25.0%
! GTAACAATGTAATTTAACTC+AGG - chr5_3:28867040-28867059 None:intergenic 25.0%
! ATGTATCATATGTTTAGAAG+TGG + chr5_3:28867310-28867329 Msa0807470:three_prime_UTR 25.0%
!! GAAGTCTATTTTACTCAAAT+AGG + chr5_3:28867332-28867351 Msa0807470:three_prime_UTR 25.0%
!! TAAGTATTTTACAATAGCAG+TGG + chr5_3:28863351-28863370 Msa0807470:five_prime_UTR 25.0%
! TAATTTGAGTGGAAAGAAAA+GGG - chr5_3:28863458-28863477 None:intergenic 25.0%
! ATAATTTGAGTGGAAAGAAA+AGG - chr5_3:28863459-28863478 None:intergenic 25.0%
! ACTAACTAGTATAATTTGAG+TGG - chr5_3:28863469-28863488 None:intergenic 25.0%
!! TAGATTTTTCTCTCTCTAAA+AGG + chr5_3:28863544-28863563 Msa0807470:five_prime_UTR 25.0%
!!! AGATTTTTCTCTCTCTAAAA+GGG + chr5_3:28863545-28863564 Msa0807470:five_prime_UTR 25.0%
!!! AATAAAGTGCTTTTGATTTG+TGG + chr5_3:28863603-28863622 Msa0807470:five_prime_UTR 25.0%
!!! ATAAAGTGCTTTTGATTTGT+GGG + chr5_3:28863604-28863623 Msa0807470:five_prime_UTR 25.0%
! GTCCTTCTATTATGATAATT+TGG + chr5_3:28863929-28863948 Msa0807470:five_prime_UTR 25.0%
! ATAGTAGAAAGTGAAGAAAA+GGG - chr5_3:28864112-28864131 None:intergenic 25.0%
! TATAGTAGAAAGTGAAGAAA+AGG - chr5_3:28864113-28864132 None:intergenic 25.0%
! AATTCTATGAGTATGAATAG+AGG + chr5_3:28864349-28864368 Msa0807470:CDS 25.0%
! ATTCTATGAGTATGAATAGA+GGG + chr5_3:28864350-28864369 Msa0807470:CDS 25.0%
!! ATTCATTTAGTCCTAACTTT+TGG + chr5_3:28864416-28864435 Msa0807470:CDS 25.0%
!! TTCATTTAGTCCTAACTTTT+GGG + chr5_3:28864417-28864436 Msa0807470:CDS 25.0%
! CTTCAAATACAATTGGAATT+AGG + chr5_3:28864491-28864510 Msa0807470:CDS 25.0%
!!! TGATTCTGGTTTTATTGAAA+GGG + chr5_3:28864660-28864679 Msa0807470:CDS 25.0%
!!! TTTTGAGCTTTATTTTGTTG+TGG + chr5_3:28865152-28865171 Msa0807470:intron 25.0%
!!! TTTGAGCTTTATTTTGTTGT+GGG + chr5_3:28865153-28865172 Msa0807470:intron 25.0%
! TAAATCATACTGAATTTCTC+TGG - chr5_3:28865617-28865636 None:intergenic 25.0%
!!! ATTAATTTGTTGATGTTTGC+AGG + chr5_3:28865674-28865693 Msa0807470:intron 25.0%
! AAGTAGAACTAAAACATACA+GGG - chr5_3:28865838-28865857 None:intergenic 25.0%
! TTAAGTACATGTTAAAGTGT+TGG - chr5_3:28865919-28865938 None:intergenic 25.0%
! CACGATTAACATTCAAAATT+AGG - chr5_3:28865947-28865966 None:intergenic 25.0%
!! AACATGTAAAAGAAAGTACA+TGG - chr5_3:28866681-28866700 None:intergenic 25.0%
!! GTACTTTCTTTTACATGTTT+CGG + chr5_3:28866682-28866701 Msa0807470:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr5_3:28866875-28866894 None:intergenic 25.0%
! GTAACAATGTAATTTAACTC+AGG - chr5_3:28867040-28867059 None:intergenic 25.0%
! ATGTATCATATGTTTAGAAG+TGG + chr5_3:28867310-28867329 Msa0807470:three_prime_UTR 25.0%
!! GAAGTCTATTTTACTCAAAT+AGG + chr5_3:28867332-28867351 Msa0807470:three_prime_UTR 25.0%
GAGAGAAAAATCTATAAGCT+TGG - chr5_3:28863538-28863557 None:intergenic 30.0%
AAAAAGCTTCAATAGAAGAC+AGG + chr5_3:28863628-28863647 Msa0807470:five_prime_UTR 30.0%
AAAAGCTTCAATAGAAGACA+GGG + chr5_3:28863629-28863648 Msa0807470:five_prime_UTR 30.0%
TCTCTCTCTTTCTTTCTTTA+GGG + chr5_3:28863899-28863918 Msa0807470:intron 30.0%
AATTTGGTACTTACAAGCTT+TGG + chr5_3:28863945-28863964 Msa0807470:five_prime_UTR 30.0%
! GAACATTTGGTACATCTTTT+TGG + chr5_3:28863992-28864011 Msa0807470:intron 30.0%
ATACCACTAGAATAACTCAT+AGG - chr5_3:28864274-28864293 None:intergenic 30.0%
TTCTATGAGTATGAATAGAG+GGG + chr5_3:28864351-28864370 Msa0807470:CDS 30.0%
! ATGAATAGAGGGGATTTTAT+TGG + chr5_3:28864361-28864380 Msa0807470:CDS 30.0%
! TGTTTTGTGAATTCGATGAA+TGG - chr5_3:28864444-28864463 None:intergenic 30.0%
TTCATCGAATTCACAAAACA+TGG + chr5_3:28864444-28864463 Msa0807470:CDS 30.0%
TCATCGAATTCACAAAACAT+GGG + chr5_3:28864445-28864464 Msa0807470:CDS 30.0%
! ATGGGATTTTGTGACATTAA+TGG + chr5_3:28864463-28864482 Msa0807470:CDS 30.0%
! TGGGATTTTGTGACATTAAT+GGG + chr5_3:28864464-28864483 Msa0807470:CDS 30.0%
ACAATTGGAATTAGGAAAGA+TGG + chr5_3:28864499-28864518 Msa0807470:CDS 30.0%
CAATTGGAATTAGGAAAGAT+GGG + chr5_3:28864500-28864519 Msa0807470:CDS 30.0%
AGGCTAATACTATGATGAAA+GGG + chr5_3:28864578-28864597 Msa0807470:CDS 30.0%
TCAATAAAACCAGAATCAGT+AGG - chr5_3:28864658-28864677 None:intergenic 30.0%
!!! CTGATTCTGGTTTTATTGAA+AGG + chr5_3:28864659-28864678 Msa0807470:CDS 30.0%
!! TCGCTTTTATCATTCTTCAA+AGG - chr5_3:28864925-28864944 None:intergenic 30.0%
TTTGAAGAATGATAAAAGCG+AGG + chr5_3:28864924-28864943 Msa0807470:CDS 30.0%
TTGAAGAATGATAAAAGCGA+GGG + chr5_3:28864925-28864944 Msa0807470:CDS 30.0%
TCGAAGAAAAGGAAAAAAAG+TGG + chr5_3:28865111-28865130 Msa0807470:CDS 30.0%
AAAGAAGAACGATCAAACAA+AGG - chr5_3:28865649-28865668 None:intergenic 30.0%
TTAGACAGATTAAGAATCTC+TGG - chr5_3:28865807-28865826 None:intergenic 30.0%
GAAGTAGAACTAAAACATAC+AGG - chr5_3:28865839-28865858 None:intergenic 30.0%
AAATATGACAGTGATCGTAT+AGG - chr5_3:28865974-28865993 None:intergenic 30.0%
ATTTACTGTTGCAAGTTTCA+TGG - chr5_3:28866139-28866158 None:intergenic 30.0%
AACTTACATCTTTAGCAAGA+AGG - chr5_3:28866188-28866207 None:intergenic 30.0%
TTGTTAATCCAATTGCATAC+CGG + chr5_3:28866206-28866225 Msa0807470:intron 30.0%
AAATTCATTGACATCTCTAG+AGG - chr5_3:28866344-28866363 None:intergenic 30.0%
AATAGTTCTTCGAAGGATAT+CGG - chr5_3:28866432-28866451 None:intergenic 30.0%
ATCTGACTTATAAATGTGAC+TGG + chr5_3:28866927-28866946 Msa0807470:intron 30.0%
TTGTCAGATGGAAATAACTA+CGG + chr5_3:28867162-28867181 Msa0807470:three_prime_UTR 30.0%
AAATGCTATAGAATTTCACC+TGG - chr5_3:28867416-28867435 None:intergenic 30.0%
GAGAGAAAAATCTATAAGCT+TGG - chr5_3:28863538-28863557 None:intergenic 30.0%
AAAAAGCTTCAATAGAAGAC+AGG + chr5_3:28863628-28863647 Msa0807470:five_prime_UTR 30.0%
AAAAGCTTCAATAGAAGACA+GGG + chr5_3:28863629-28863648 Msa0807470:five_prime_UTR 30.0%
TCTCTCTCTTTCTTTCTTTA+GGG + chr5_3:28863899-28863918 Msa0807470:intron 30.0%
AATTTGGTACTTACAAGCTT+TGG + chr5_3:28863945-28863964 Msa0807470:five_prime_UTR 30.0%
! GAACATTTGGTACATCTTTT+TGG + chr5_3:28863992-28864011 Msa0807470:intron 30.0%
ATACCACTAGAATAACTCAT+AGG - chr5_3:28864274-28864293 None:intergenic 30.0%
TTCTATGAGTATGAATAGAG+GGG + chr5_3:28864351-28864370 Msa0807470:CDS 30.0%
! ATGAATAGAGGGGATTTTAT+TGG + chr5_3:28864361-28864380 Msa0807470:CDS 30.0%
! TGTTTTGTGAATTCGATGAA+TGG - chr5_3:28864444-28864463 None:intergenic 30.0%
TTCATCGAATTCACAAAACA+TGG + chr5_3:28864444-28864463 Msa0807470:CDS 30.0%
TCATCGAATTCACAAAACAT+GGG + chr5_3:28864445-28864464 Msa0807470:CDS 30.0%
! ATGGGATTTTGTGACATTAA+TGG + chr5_3:28864463-28864482 Msa0807470:CDS 30.0%
! TGGGATTTTGTGACATTAAT+GGG + chr5_3:28864464-28864483 Msa0807470:CDS 30.0%
ACAATTGGAATTAGGAAAGA+TGG + chr5_3:28864499-28864518 Msa0807470:CDS 30.0%
CAATTGGAATTAGGAAAGAT+GGG + chr5_3:28864500-28864519 Msa0807470:CDS 30.0%
AGGCTAATACTATGATGAAA+GGG + chr5_3:28864578-28864597 Msa0807470:CDS 30.0%
TCAATAAAACCAGAATCAGT+AGG - chr5_3:28864658-28864677 None:intergenic 30.0%
!!! CTGATTCTGGTTTTATTGAA+AGG + chr5_3:28864659-28864678 Msa0807470:CDS 30.0%
!! TCGCTTTTATCATTCTTCAA+AGG - chr5_3:28864925-28864944 None:intergenic 30.0%
TTTGAAGAATGATAAAAGCG+AGG + chr5_3:28864924-28864943 Msa0807470:CDS 30.0%
TTGAAGAATGATAAAAGCGA+GGG + chr5_3:28864925-28864944 Msa0807470:CDS 30.0%
TCGAAGAAAAGGAAAAAAAG+TGG + chr5_3:28865111-28865130 Msa0807470:CDS 30.0%
AAAGAAGAACGATCAAACAA+AGG - chr5_3:28865649-28865668 None:intergenic 30.0%
TTAGACAGATTAAGAATCTC+TGG - chr5_3:28865807-28865826 None:intergenic 30.0%
GAAGTAGAACTAAAACATAC+AGG - chr5_3:28865839-28865858 None:intergenic 30.0%
AAATATGACAGTGATCGTAT+AGG - chr5_3:28865974-28865993 None:intergenic 30.0%
ATTTACTGTTGCAAGTTTCA+TGG - chr5_3:28866139-28866158 None:intergenic 30.0%
AACTTACATCTTTAGCAAGA+AGG - chr5_3:28866188-28866207 None:intergenic 30.0%
TTGTTAATCCAATTGCATAC+CGG + chr5_3:28866206-28866225 Msa0807470:intron 30.0%
AAATTCATTGACATCTCTAG+AGG - chr5_3:28866344-28866363 None:intergenic 30.0%
AATAGTTCTTCGAAGGATAT+CGG - chr5_3:28866432-28866451 None:intergenic 30.0%
ATCTGACTTATAAATGTGAC+TGG + chr5_3:28866927-28866946 Msa0807470:intron 30.0%
TTGTCAGATGGAAATAACTA+CGG + chr5_3:28867162-28867181 Msa0807470:three_prime_UTR 30.0%
AAATGCTATAGAATTTCACC+TGG - chr5_3:28867416-28867435 None:intergenic 30.0%
! GTATTTTACAATAGCAGTGG+CGG + chr5_3:28863354-28863373 Msa0807470:five_prime_UTR 35.0%
! AAAGAAAAGGGTAATGGCAA+AGG - chr5_3:28863446-28863465 None:intergenic 35.0%
!! TTCTGAAACTGTTTCTGACT+AGG + chr5_3:28863765-28863784 Msa0807470:intron 35.0%
!! TCTGAAACTGTTTCTGACTA+GGG + chr5_3:28863766-28863785 Msa0807470:intron 35.0%
CTCTCTCTCTTTCTTTCTTT+AGG + chr5_3:28863898-28863917 Msa0807470:intron 35.0%
! TCTCTTTCTTTCTTTAGGGA+GGG + chr5_3:28863903-28863922 Msa0807470:intron 35.0%
!! GTACTTACAAGCTTTGGAAA+TGG + chr5_3:28863951-28863970 Msa0807470:five_prime_UTR 35.0%
!! TGGTACATCTTTTTGGTACT+TGG + chr5_3:28863999-28864018 Msa0807470:intron 35.0%
!! TGGATTTTGTTTCAGCTCTT+TGG + chr5_3:28864019-28864038 Msa0807470:intron 35.0%
GAGTGACAAAGAAAAGTTTG+AGG + chr5_3:28864228-28864247 Msa0807470:CDS 35.0%
TGACAAAGAAAAGTTTGAGG+TGG + chr5_3:28864231-28864250 Msa0807470:CDS 35.0%
! AAAGAAAAGTTTGAGGTGGA+TGG + chr5_3:28864235-28864254 Msa0807470:CDS 35.0%
GATCCTATGAGTTATTCTAG+TGG + chr5_3:28864268-28864287 Msa0807470:CDS 35.0%
! TTTGGTGCAAATTCATCTGT+TGG + chr5_3:28864310-28864329 Msa0807470:CDS 35.0%
TTGGTGCAAATTCATCTGTT+GGG + chr5_3:28864311-28864330 Msa0807470:CDS 35.0%
ACTAAATGAATCCACCATTG+AGG - chr5_3:28864407-28864426 None:intergenic 35.0%
GGGAGTTCTTCAAATACAAT+TGG + chr5_3:28864484-28864503 Msa0807470:CDS 35.0%
GATCATGGAACACTTGAAAT+TGG + chr5_3:28864547-28864566 Msa0807470:CDS 35.0%
ATGGAACACTTGAAATTGGT+TGG + chr5_3:28864551-28864570 Msa0807470:CDS 35.0%
CTTTCATCATAGTATTAGCC+TGG - chr5_3:28864579-28864598 None:intergenic 35.0%
CAGGCTAATACTATGATGAA+AGG + chr5_3:28864577-28864596 Msa0807470:CDS 35.0%
GGCTAATACTATGATGAAAG+GGG + chr5_3:28864579-28864598 Msa0807470:CDS 35.0%
AATACTATGATGAAAGGGGA+TGG + chr5_3:28864583-28864602 Msa0807470:CDS 35.0%
!!! GTTTTTTACCGAATGGACAA+GGG + chr5_3:28864605-28864624 Msa0807470:CDS 35.0%
AATGTTAATGATTCCGACAG+AGG + chr5_3:28864991-28865010 Msa0807470:CDS 35.0%
TAGTAGTACCTTCCAACATT+GGG - chr5_3:28865062-28865081 None:intergenic 35.0%
GAGTTTAGTCCTTTCATAGA+AGG - chr5_3:28865093-28865112 None:intergenic 35.0%
AAGGACTAAACTCGAAGAAA+AGG + chr5_3:28865100-28865119 Msa0807470:CDS 35.0%
GAAAAGGAAAAAAAGTGGAC+AGG + chr5_3:28865116-28865135 Msa0807470:CDS 35.0%
! TGTGATTGAGTTTTTCCTTG+TGG + chr5_3:28865195-28865214 Msa0807470:intron 35.0%
! ATTGAGTTTTTCCTTGTGGT+AGG + chr5_3:28865199-28865218 Msa0807470:intron 35.0%
GCTCAAGAACTACAAAATGA+AGG + chr5_3:28865248-28865267 Msa0807470:CDS 35.0%
! ACTACAAAATGAAGGTGCAA+AGG + chr5_3:28865256-28865275 Msa0807470:CDS 35.0%
TCAAAATTCTGATCCACCTA+AGG + chr5_3:28865361-28865380 Msa0807470:CDS 35.0%
ACATGTATGTATTCCTCCTT+AGG - chr5_3:28865380-28865399 None:intergenic 35.0%
AGGAGGAATACATACATGTT+AGG + chr5_3:28865381-28865400 Msa0807470:CDS 35.0%
GGAGGAATACATACATGTTA+GGG + chr5_3:28865382-28865401 Msa0807470:CDS 35.0%
! TTAAACTGGATTTTCACTGC+AGG + chr5_3:28865508-28865527 Msa0807470:intron 35.0%
GTGGGAAAATACAAAGAGAA+GGG - chr5_3:28865785-28865804 None:intergenic 35.0%
ACAGATTAAGAATCTCTGGT+GGG - chr5_3:28865803-28865822 None:intergenic 35.0%
CAAGTTTCATGGACAAAAAC+TGG - chr5_3:28866128-28866147 None:intergenic 35.0%
AACTTGCAACAGTAAATCCA+CGG + chr5_3:28866142-28866161 Msa0807470:CDS 35.0%
! TTTTCTAACCGGTATGCAAT+TGG - chr5_3:28866217-28866236 None:intergenic 35.0%
TCAATCAGTGATTCCAAACA+TGG + chr5_3:28866397-28866416 Msa0807470:three_prime_UTR 35.0%
GTGTATGAATAGTTCTTCGA+AGG - chr5_3:28866439-28866458 None:intergenic 35.0%
CAATGGATCAATACCTGATT+TGG - chr5_3:28866494-28866513 None:intergenic 35.0%
AACAAAGACAAATTGTGCGA+AGG - chr5_3:28866538-28866557 None:intergenic 35.0%
ATGATGCATCCATAAATCTG+TGG - chr5_3:28866616-28866635 None:intergenic 35.0%
TTGCTTATAATTGTGACCAG+AGG + chr5_3:28866987-28867006 Msa0807470:intron 35.0%
TGCTTATAATTGTGACCAGA+GGG + chr5_3:28866988-28867007 Msa0807470:intron 35.0%
! CTTCACTACATCGCATATTT+TGG + chr5_3:28867130-28867149 Msa0807470:three_prime_UTR 35.0%
! GTATTTTACAATAGCAGTGG+CGG + chr5_3:28863354-28863373 Msa0807470:five_prime_UTR 35.0%
! AAAGAAAAGGGTAATGGCAA+AGG - chr5_3:28863446-28863465 None:intergenic 35.0%
!! TTCTGAAACTGTTTCTGACT+AGG + chr5_3:28863765-28863784 Msa0807470:intron 35.0%
!! TCTGAAACTGTTTCTGACTA+GGG + chr5_3:28863766-28863785 Msa0807470:intron 35.0%
CTCTCTCTCTTTCTTTCTTT+AGG + chr5_3:28863898-28863917 Msa0807470:intron 35.0%
! TCTCTTTCTTTCTTTAGGGA+GGG + chr5_3:28863903-28863922 Msa0807470:intron 35.0%
!! GTACTTACAAGCTTTGGAAA+TGG + chr5_3:28863951-28863970 Msa0807470:five_prime_UTR 35.0%
!! TGGTACATCTTTTTGGTACT+TGG + chr5_3:28863999-28864018 Msa0807470:intron 35.0%
!! TGGATTTTGTTTCAGCTCTT+TGG + chr5_3:28864019-28864038 Msa0807470:intron 35.0%
GAGTGACAAAGAAAAGTTTG+AGG + chr5_3:28864228-28864247 Msa0807470:CDS 35.0%
TGACAAAGAAAAGTTTGAGG+TGG + chr5_3:28864231-28864250 Msa0807470:CDS 35.0%
! AAAGAAAAGTTTGAGGTGGA+TGG + chr5_3:28864235-28864254 Msa0807470:CDS 35.0%
GATCCTATGAGTTATTCTAG+TGG + chr5_3:28864268-28864287 Msa0807470:CDS 35.0%
! TTTGGTGCAAATTCATCTGT+TGG + chr5_3:28864310-28864329 Msa0807470:CDS 35.0%
TTGGTGCAAATTCATCTGTT+GGG + chr5_3:28864311-28864330 Msa0807470:CDS 35.0%
ACTAAATGAATCCACCATTG+AGG - chr5_3:28864407-28864426 None:intergenic 35.0%
GGGAGTTCTTCAAATACAAT+TGG + chr5_3:28864484-28864503 Msa0807470:CDS 35.0%
GATCATGGAACACTTGAAAT+TGG + chr5_3:28864547-28864566 Msa0807470:CDS 35.0%
ATGGAACACTTGAAATTGGT+TGG + chr5_3:28864551-28864570 Msa0807470:CDS 35.0%
CTTTCATCATAGTATTAGCC+TGG - chr5_3:28864579-28864598 None:intergenic 35.0%
CAGGCTAATACTATGATGAA+AGG + chr5_3:28864577-28864596 Msa0807470:CDS 35.0%
GGCTAATACTATGATGAAAG+GGG + chr5_3:28864579-28864598 Msa0807470:CDS 35.0%
AATACTATGATGAAAGGGGA+TGG + chr5_3:28864583-28864602 Msa0807470:CDS 35.0%
!!! GTTTTTTACCGAATGGACAA+GGG + chr5_3:28864605-28864624 Msa0807470:CDS 35.0%
AATGTTAATGATTCCGACAG+AGG + chr5_3:28864991-28865010 Msa0807470:CDS 35.0%
TAGTAGTACCTTCCAACATT+GGG - chr5_3:28865062-28865081 None:intergenic 35.0%
GAGTTTAGTCCTTTCATAGA+AGG - chr5_3:28865093-28865112 None:intergenic 35.0%
AAGGACTAAACTCGAAGAAA+AGG + chr5_3:28865100-28865119 Msa0807470:CDS 35.0%
GAAAAGGAAAAAAAGTGGAC+AGG + chr5_3:28865116-28865135 Msa0807470:CDS 35.0%
! TGTGATTGAGTTTTTCCTTG+TGG + chr5_3:28865195-28865214 Msa0807470:intron 35.0%
! ATTGAGTTTTTCCTTGTGGT+AGG + chr5_3:28865199-28865218 Msa0807470:intron 35.0%
GCTCAAGAACTACAAAATGA+AGG + chr5_3:28865248-28865267 Msa0807470:CDS 35.0%
! ACTACAAAATGAAGGTGCAA+AGG + chr5_3:28865256-28865275 Msa0807470:CDS 35.0%
TCAAAATTCTGATCCACCTA+AGG + chr5_3:28865361-28865380 Msa0807470:CDS 35.0%
ACATGTATGTATTCCTCCTT+AGG - chr5_3:28865380-28865399 None:intergenic 35.0%
AGGAGGAATACATACATGTT+AGG + chr5_3:28865381-28865400 Msa0807470:CDS 35.0%
GGAGGAATACATACATGTTA+GGG + chr5_3:28865382-28865401 Msa0807470:CDS 35.0%
! TTAAACTGGATTTTCACTGC+AGG + chr5_3:28865508-28865527 Msa0807470:intron 35.0%
GTGGGAAAATACAAAGAGAA+GGG - chr5_3:28865785-28865804 None:intergenic 35.0%
ACAGATTAAGAATCTCTGGT+GGG - chr5_3:28865803-28865822 None:intergenic 35.0%
CAAGTTTCATGGACAAAAAC+TGG - chr5_3:28866128-28866147 None:intergenic 35.0%
AACTTGCAACAGTAAATCCA+CGG + chr5_3:28866142-28866161 Msa0807470:CDS 35.0%
! TTTTCTAACCGGTATGCAAT+TGG - chr5_3:28866217-28866236 None:intergenic 35.0%
TCAATCAGTGATTCCAAACA+TGG + chr5_3:28866397-28866416 Msa0807470:three_prime_UTR 35.0%
GTGTATGAATAGTTCTTCGA+AGG - chr5_3:28866439-28866458 None:intergenic 35.0%
CAATGGATCAATACCTGATT+TGG - chr5_3:28866494-28866513 None:intergenic 35.0%
AACAAAGACAAATTGTGCGA+AGG - chr5_3:28866538-28866557 None:intergenic 35.0%
ATGATGCATCCATAAATCTG+TGG - chr5_3:28866616-28866635 None:intergenic 35.0%
TTGCTTATAATTGTGACCAG+AGG + chr5_3:28866987-28867006 Msa0807470:intron 35.0%
TGCTTATAATTGTGACCAGA+GGG + chr5_3:28866988-28867007 Msa0807470:intron 35.0%
! CTTCACTACATCGCATATTT+TGG + chr5_3:28867130-28867149 Msa0807470:three_prime_UTR 35.0%
GAGTGGAAAGAAAAGGGTAA+TGG - chr5_3:28863452-28863471 None:intergenic 40.0%
AGTAGCACAGGATCAGAAAA+TGG + chr5_3:28863659-28863678 Msa0807470:five_prime_UTR 40.0%
GTAGCACAGGATCAGAAAAT+GGG + chr5_3:28863660-28863679 Msa0807470:five_prime_UTR 40.0%
TTCTGACTAGGGTTTGAATG+AGG + chr5_3:28863777-28863796 Msa0807470:intron 40.0%
! CTCTCTTTCTTTCTTTAGGG+AGG + chr5_3:28863902-28863921 Msa0807470:intron 40.0%
! CTCTTTCTTTCTTTAGGGAG+GGG + chr5_3:28863904-28863923 Msa0807470:intron 40.0%
! TCTTTCTTTCTTTAGGGAGG+GGG + chr5_3:28863905-28863924 Msa0807470:intron 40.0%
GCTAAACTCGTGTGAACATT+TGG + chr5_3:28863979-28863998 Msa0807470:five_prime_UTR 40.0%
CAGAGAGACAGAGAGAAAAA+GGG - chr5_3:28864077-28864096 None:intergenic 40.0%
TTTGCACCAAATCTCCAATC+AGG - chr5_3:28864301-28864320 None:intergenic 40.0%
TGCAAATTCATCTGTTGGGT+TGG + chr5_3:28864315-28864334 Msa0807470:CDS 40.0%
!! TCTGTTGGGTTGGTTTCAAT+TGG + chr5_3:28864325-28864344 Msa0807470:CDS 40.0%
!! CTGTTGGGTTGGTTTCAATT+GGG + chr5_3:28864326-28864345 Msa0807470:CDS 40.0%
ATCATGTTCATCTGCCTCAA+TGG + chr5_3:28864390-28864409 Msa0807470:CDS 40.0%
GATGAATGGTCCCAAAAGTT+AGG - chr5_3:28864430-28864449 None:intergenic 40.0%
! GGAATTAGGAAAGATGGGTT+TGG + chr5_3:28864505-28864524 Msa0807470:CDS 40.0%
!! AGGAAAGATGGGTTTGGTTT+TGG + chr5_3:28864511-28864530 Msa0807470:CDS 40.0%
ACTTGAAATTGGTTGGAACC+AGG + chr5_3:28864558-28864577 Msa0807470:CDS 40.0%
!!! GGTTTTTTACCGAATGGACA+AGG + chr5_3:28864604-28864623 Msa0807470:CDS 40.0%
GGAAAAATCCCTTGTCCATT+CGG - chr5_3:28864616-28864635 None:intergenic 40.0%
GGAAACTGAGATAAACTCTG+AGG - chr5_3:28864637-28864656 None:intergenic 40.0%
!! TCTCAGTTTCCTACTGATTC+TGG + chr5_3:28864646-28864665 Msa0807470:CDS 40.0%
!! ATGTATGCCGGTTCAATTCA+TGG + chr5_3:28864760-28864779 Msa0807470:CDS 40.0%
CCTAGTTCCATGAATTGAAC+CGG - chr5_3:28864770-28864789 None:intergenic 40.0%
CGGTTCAATTCATGGAACTA+GGG + chr5_3:28864768-28864787 Msa0807470:CDS 40.0%
GTTAGACTTCGAGTAGCAAA+TGG + chr5_3:28864805-28864824 Msa0807470:CDS 40.0%
AGAATGATAAAAGCGAGGGT+CGG + chr5_3:28864929-28864948 Msa0807470:CDS 40.0%
AGTAGTACCTTCCAACATTG+GGG - chr5_3:28865061-28865080 None:intergenic 40.0%
CTAGTAGTACCTTCCAACAT+TGG - chr5_3:28865063-28865082 None:intergenic 40.0%
!! ATGTTGGAAGGTACTACTAG+TGG + chr5_3:28865063-28865082 Msa0807470:CDS 40.0%
GGAAAAAAAGTGGACAGGTA+TGG + chr5_3:28865121-28865140 Msa0807470:intron 40.0%
ATTATCAGCATCCTACCACA+AGG - chr5_3:28865213-28865232 None:intergenic 40.0%
TGTAGTTCTTGAGCTCTACT+GGG - chr5_3:28865242-28865261 None:intergenic 40.0%
TTGTAGTTCTTGAGCTCTAC+TGG - chr5_3:28865243-28865262 None:intergenic 40.0%
TCATTGTCGAACTTGGTTGT+TGG - chr5_3:28865310-28865329 None:intergenic 40.0%
ACAACCAAGTTCGACAATGA+AGG + chr5_3:28865310-28865329 Msa0807470:CDS 40.0%
!! AGAATTTTGAGAGCCCTGTT+TGG - chr5_3:28865351-28865370 None:intergenic 40.0%
AAATTCTGATCCACCTAAGG+AGG + chr5_3:28865364-28865383 Msa0807470:CDS 40.0%
TGTATGTATTCCTCCTTAGG+TGG - chr5_3:28865377-28865396 None:intergenic 40.0%
GGAGGGAAAAAATAAGTGAG+AGG + chr5_3:28865534-28865553 Msa0807470:intron 40.0%
TTTCTTCAAGAACTTGTGCC+TGG + chr5_3:28865563-28865582 Msa0807470:intron 40.0%
! TTCAACGACAAGTTGAGGTA+TGG + chr5_3:28865748-28865767 Msa0807470:intron 40.0%
GGTGGGAAAATACAAAGAGA+AGG - chr5_3:28865786-28865805 None:intergenic 40.0%
GACAGATTAAGAATCTCTGG+TGG - chr5_3:28865804-28865823 None:intergenic 40.0%
! AGTGTTGGAGTTGTAAACGA+TGG - chr5_3:28865904-28865923 None:intergenic 40.0%
ACTGGCACAAGAGAAAAGAT+GGG - chr5_3:28866110-28866129 None:intergenic 40.0%
AACTGGCACAAGAGAAAAGA+TGG - chr5_3:28866111-28866130 None:intergenic 40.0%
TCAATATTGAAATCCAGCCG+TGG - chr5_3:28866162-28866181 None:intergenic 40.0%
ACTGTCAGATTCTTCACCAA+CGG + chr5_3:28866291-28866310 Msa0807470:intron 40.0%
CATTACATCCATCTCAACCA+GGG + chr5_3:28866369-28866388 Msa0807470:three_prime_UTR 40.0%
! ATCACTGATTGAATCATCCC+TGG - chr5_3:28866389-28866408 None:intergenic 40.0%
TGTGTAGATTAGTGCACATG+AGG + chr5_3:28866640-28866659 Msa0807470:intron 40.0%
AGTTTGTACCATCCACATCT+TGG - chr5_3:28866833-28866852 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr5_3:28866871-28866890 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr5_3:28866872-28866891 None:intergenic 40.0%
AAGAAAAAGCTTACTCCCTC+TGG - chr5_3:28867006-28867025 None:intergenic 40.0%
ACATTGTTACACGCTCTTGT+AGG + chr5_3:28867050-28867069 Msa0807470:intron 40.0%
! TGGCTTTTGTTCTTGTCAGA+TGG + chr5_3:28867150-28867169 Msa0807470:three_prime_UTR 40.0%
GAGTGGAAAGAAAAGGGTAA+TGG - chr5_3:28863452-28863471 None:intergenic 40.0%
AGTAGCACAGGATCAGAAAA+TGG + chr5_3:28863659-28863678 Msa0807470:five_prime_UTR 40.0%
GTAGCACAGGATCAGAAAAT+GGG + chr5_3:28863660-28863679 Msa0807470:five_prime_UTR 40.0%
TTCTGACTAGGGTTTGAATG+AGG + chr5_3:28863777-28863796 Msa0807470:intron 40.0%
! CTCTCTTTCTTTCTTTAGGG+AGG + chr5_3:28863902-28863921 Msa0807470:intron 40.0%
! CTCTTTCTTTCTTTAGGGAG+GGG + chr5_3:28863904-28863923 Msa0807470:intron 40.0%
! TCTTTCTTTCTTTAGGGAGG+GGG + chr5_3:28863905-28863924 Msa0807470:intron 40.0%
GCTAAACTCGTGTGAACATT+TGG + chr5_3:28863979-28863998 Msa0807470:five_prime_UTR 40.0%
CAGAGAGACAGAGAGAAAAA+GGG - chr5_3:28864077-28864096 None:intergenic 40.0%
TTTGCACCAAATCTCCAATC+AGG - chr5_3:28864301-28864320 None:intergenic 40.0%
TGCAAATTCATCTGTTGGGT+TGG + chr5_3:28864315-28864334 Msa0807470:CDS 40.0%
!! TCTGTTGGGTTGGTTTCAAT+TGG + chr5_3:28864325-28864344 Msa0807470:CDS 40.0%
!! CTGTTGGGTTGGTTTCAATT+GGG + chr5_3:28864326-28864345 Msa0807470:CDS 40.0%
ATCATGTTCATCTGCCTCAA+TGG + chr5_3:28864390-28864409 Msa0807470:CDS 40.0%
GATGAATGGTCCCAAAAGTT+AGG - chr5_3:28864430-28864449 None:intergenic 40.0%
! GGAATTAGGAAAGATGGGTT+TGG + chr5_3:28864505-28864524 Msa0807470:CDS 40.0%
!! AGGAAAGATGGGTTTGGTTT+TGG + chr5_3:28864511-28864530 Msa0807470:CDS 40.0%
ACTTGAAATTGGTTGGAACC+AGG + chr5_3:28864558-28864577 Msa0807470:CDS 40.0%
!!! GGTTTTTTACCGAATGGACA+AGG + chr5_3:28864604-28864623 Msa0807470:CDS 40.0%
GGAAAAATCCCTTGTCCATT+CGG - chr5_3:28864616-28864635 None:intergenic 40.0%
GGAAACTGAGATAAACTCTG+AGG - chr5_3:28864637-28864656 None:intergenic 40.0%
!! TCTCAGTTTCCTACTGATTC+TGG + chr5_3:28864646-28864665 Msa0807470:CDS 40.0%
!! ATGTATGCCGGTTCAATTCA+TGG + chr5_3:28864760-28864779 Msa0807470:CDS 40.0%
CCTAGTTCCATGAATTGAAC+CGG - chr5_3:28864770-28864789 None:intergenic 40.0%
CGGTTCAATTCATGGAACTA+GGG + chr5_3:28864768-28864787 Msa0807470:CDS 40.0%
GTTAGACTTCGAGTAGCAAA+TGG + chr5_3:28864805-28864824 Msa0807470:CDS 40.0%
AGAATGATAAAAGCGAGGGT+CGG + chr5_3:28864929-28864948 Msa0807470:CDS 40.0%
AGTAGTACCTTCCAACATTG+GGG - chr5_3:28865061-28865080 None:intergenic 40.0%
CTAGTAGTACCTTCCAACAT+TGG - chr5_3:28865063-28865082 None:intergenic 40.0%
!! ATGTTGGAAGGTACTACTAG+TGG + chr5_3:28865063-28865082 Msa0807470:CDS 40.0%
GGAAAAAAAGTGGACAGGTA+TGG + chr5_3:28865121-28865140 Msa0807470:intron 40.0%
ATTATCAGCATCCTACCACA+AGG - chr5_3:28865213-28865232 None:intergenic 40.0%
TGTAGTTCTTGAGCTCTACT+GGG - chr5_3:28865242-28865261 None:intergenic 40.0%
TTGTAGTTCTTGAGCTCTAC+TGG - chr5_3:28865243-28865262 None:intergenic 40.0%
TCATTGTCGAACTTGGTTGT+TGG - chr5_3:28865310-28865329 None:intergenic 40.0%
ACAACCAAGTTCGACAATGA+AGG + chr5_3:28865310-28865329 Msa0807470:CDS 40.0%
!! AGAATTTTGAGAGCCCTGTT+TGG - chr5_3:28865351-28865370 None:intergenic 40.0%
AAATTCTGATCCACCTAAGG+AGG + chr5_3:28865364-28865383 Msa0807470:CDS 40.0%
TGTATGTATTCCTCCTTAGG+TGG - chr5_3:28865377-28865396 None:intergenic 40.0%
GGAGGGAAAAAATAAGTGAG+AGG + chr5_3:28865534-28865553 Msa0807470:intron 40.0%
TTTCTTCAAGAACTTGTGCC+TGG + chr5_3:28865563-28865582 Msa0807470:intron 40.0%
! TTCAACGACAAGTTGAGGTA+TGG + chr5_3:28865748-28865767 Msa0807470:intron 40.0%
GGTGGGAAAATACAAAGAGA+AGG - chr5_3:28865786-28865805 None:intergenic 40.0%
GACAGATTAAGAATCTCTGG+TGG - chr5_3:28865804-28865823 None:intergenic 40.0%
! AGTGTTGGAGTTGTAAACGA+TGG - chr5_3:28865904-28865923 None:intergenic 40.0%
ACTGGCACAAGAGAAAAGAT+GGG - chr5_3:28866110-28866129 None:intergenic 40.0%
AACTGGCACAAGAGAAAAGA+TGG - chr5_3:28866111-28866130 None:intergenic 40.0%
TCAATATTGAAATCCAGCCG+TGG - chr5_3:28866162-28866181 None:intergenic 40.0%
ACTGTCAGATTCTTCACCAA+CGG + chr5_3:28866291-28866310 Msa0807470:intron 40.0%
CATTACATCCATCTCAACCA+GGG + chr5_3:28866369-28866388 Msa0807470:three_prime_UTR 40.0%
! ATCACTGATTGAATCATCCC+TGG - chr5_3:28866389-28866408 None:intergenic 40.0%
TGTGTAGATTAGTGCACATG+AGG + chr5_3:28866640-28866659 Msa0807470:intron 40.0%
AGTTTGTACCATCCACATCT+TGG - chr5_3:28866833-28866852 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr5_3:28866871-28866890 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr5_3:28866872-28866891 None:intergenic 40.0%
AAGAAAAAGCTTACTCCCTC+TGG - chr5_3:28867006-28867025 None:intergenic 40.0%
ACATTGTTACACGCTCTTGT+AGG + chr5_3:28867050-28867069 Msa0807470:intron 40.0%
! TGGCTTTTGTTCTTGTCAGA+TGG + chr5_3:28867150-28867169 Msa0807470:three_prime_UTR 40.0%
! TTTTACAATAGCAGTGGCGG+TGG + chr5_3:28863357-28863376 Msa0807470:five_prime_UTR 45.0%
! TCTCTCTAAAAGGGAACTGC+AGG + chr5_3:28863554-28863573 Msa0807470:five_prime_UTR 45.0%
! CTTTCTTTCTTTAGGGAGGG+GGG + chr5_3:28863906-28863925 Msa0807470:intron 45.0%
! TTTCTTTCTTTAGGGAGGGG+GGG + chr5_3:28863907-28863926 Msa0807470:intron 45.0%
GACAGAGAGAAAAAGGGAAC+AGG - chr5_3:28864071-28864090 None:intergenic 45.0%
GCAGAGAGACAGAGAGAAAA+AGG - chr5_3:28864078-28864097 None:intergenic 45.0%
! GTTTGAGGTGGATGGAAATG+AGG + chr5_3:28864243-28864262 Msa0807470:CDS 45.0%
ATGCCACCTGATTGGAGATT+TGG + chr5_3:28864292-28864311 Msa0807470:CDS 45.0%
ATGTTCATCTGCCTCAATGG+TGG + chr5_3:28864393-28864412 Msa0807470:CDS 45.0%
!!! GATGGGTTTGGTTTTGGAAG+AGG + chr5_3:28864517-28864536 Msa0807470:CDS 45.0%
!!! GGGGATGGTTTTTTACCGAA+TGG + chr5_3:28864598-28864617 Msa0807470:CDS 45.0%
!! GTTTTATTGAAAGGGCTGCG+AGG + chr5_3:28864668-28864687 Msa0807470:CDS 45.0%
TGGAGGGAATTTCAGTGATG+TGG + chr5_3:28864705-28864724 Msa0807470:CDS 45.0%
AGTGATGTGGTGAACGCTTA+TGG + chr5_3:28864718-28864737 Msa0807470:CDS 45.0%
GTGATGTGGTGAACGCTTAT+GGG + chr5_3:28864719-28864738 Msa0807470:CDS 45.0%
TGATGTGGTGAACGCTTATG+GGG + chr5_3:28864720-28864739 Msa0807470:CDS 45.0%
TTATGGGGTTCCTCAATCCA+TGG + chr5_3:28864735-28864754 Msa0807470:CDS 45.0%
CCGGTTCAATTCATGGAACT+AGG + chr5_3:28864767-28864786 Msa0807470:CDS 45.0%
AGACTTCGAGTAGCAAATGG+AGG + chr5_3:28864808-28864827 Msa0807470:CDS 45.0%
GGATCATCACTCTCTTGTGT+TGG - chr5_3:28864835-28864854 None:intergenic 45.0%
AGAGAGTGATGATCCGAATG+TGG + chr5_3:28864840-28864859 Msa0807470:CDS 45.0%
GTAGCTGCTTCAACCACATT+CGG - chr5_3:28864856-28864875 None:intergenic 45.0%
GTGGTTGAAGCAGCTACAAA+AGG + chr5_3:28864859-28864878 Msa0807470:CDS 45.0%
GTCACCATCTGTTGAGCAAT+TGG + chr5_3:28864885-28864904 Msa0807470:CDS 45.0%
GTAGCCAATTGCTCAACAGA+TGG - chr5_3:28864892-28864911 None:intergenic 45.0%
GAATGATAAAAGCGAGGGTC+GGG + chr5_3:28864930-28864949 Msa0807470:CDS 45.0%
TGATTCCGACAGAGGTGAAT+CGG + chr5_3:28864999-28865018 Msa0807470:CDS 45.0%
ACAAGATGGTTCCCCAATGT+TGG + chr5_3:28865047-28865066 Msa0807470:CDS 45.0%
AGTGGAGAGCCTTCTATGAA+AGG + chr5_3:28865081-28865100 Msa0807470:CDS 45.0%
AACCCTGAGAACCAACAGAA+GGG + chr5_3:28865281-28865300 Msa0807470:CDS 45.0%
GAAGCCTTCATTGTCGAACT+TGG - chr5_3:28865317-28865336 None:intergenic 45.0%
AGTTCGACAATGAAGGCTTC+TGG + chr5_3:28865317-28865336 Msa0807470:CDS 45.0%
GTTCGACAATGAAGGCTTCT+GGG + chr5_3:28865318-28865337 Msa0807470:CDS 45.0%
! TTCTGGGAAGAATGCCAAAC+AGG + chr5_3:28865334-28865353 Msa0807470:CDS 45.0%
TCTGGGAAGAATGCCAAACA+GGG + chr5_3:28865335-28865354 Msa0807470:CDS 45.0%
TGTATCTTACCCTCTCTGCA+AGG - chr5_3:28865439-28865458 None:intergenic 45.0%
! ATTTTCACTGCAGGTGAGGA+GGG + chr5_3:28865517-28865536 Msa0807470:intron 45.0%
TGTTGATGTTTGCAGGTCAC+TGG + chr5_3:28865681-28865700 Msa0807470:intron 45.0%
ATGTTTGCAGGTCACTGGTA+AGG + chr5_3:28865686-28865705 Msa0807470:intron 45.0%
GTCACTTCAACGACAAGTTG+AGG + chr5_3:28865743-28865762 Msa0807470:intron 45.0%
GGAAATCCTAGTGTGGATGA+AGG - chr5_3:28866323-28866342 None:intergenic 45.0%
! CTCTAGAGGAAATCCTAGTG+TGG - chr5_3:28866330-28866349 None:intergenic 45.0%
GGTTGAGATGGATGTAATGG+AGG - chr5_3:28866368-28866387 None:intergenic 45.0%
CCTGGTTGAGATGGATGTAA+TGG - chr5_3:28866371-28866390 None:intergenic 45.0%
CCATTACATCCATCTCAACC+AGG + chr5_3:28866368-28866387 Msa0807470:three_prime_UTR 45.0%
TGAATCATCCCTGGTTGAGA+TGG - chr5_3:28866380-28866399 None:intergenic 45.0%
TTCTTCGAAGGATATCGGAC+GGG - chr5_3:28866427-28866446 None:intergenic 45.0%
GTTCTTCGAAGGATATCGGA+CGG - chr5_3:28866428-28866447 None:intergenic 45.0%
ACACAGTTAACACCGTTGAG+TGG + chr5_3:28866455-28866474 Msa0807470:three_prime_UTR 45.0%
TCCTTGAATCCTCCACTCAA+CGG - chr5_3:28866470-28866489 None:intergenic 45.0%
AGGATTCAAGGAGCCAAATC+AGG + chr5_3:28866478-28866497 Msa0807470:three_prime_UTR 45.0%
! TGCTTTAGATGCCTGATGTG+TGG + chr5_3:28866748-28866767 Msa0807470:intron 45.0%
! GCTTTAGATGCCTGATGTGT+GGG + chr5_3:28866749-28866768 Msa0807470:intron 45.0%
TCCACATCTTGGCTACTCAT+GGG - chr5_3:28866822-28866841 None:intergenic 45.0%
ATCCACATCTTGGCTACTCA+TGG - chr5_3:28866823-28866842 None:intergenic 45.0%
ATGAGTAGCCAAGATGTGGA+TGG + chr5_3:28866822-28866841 Msa0807470:three_prime_UTR 45.0%
!! ACCGGAGGGAGTATTTGTTT+GGG - chr5_3:28866857-28866876 None:intergenic 45.0%
!! TTTCATCTGATTTGCTGCCG+TGG - chr5_3:28867078-28867097 None:intergenic 45.0%
! TTCAAGTTTGGCAAGTCGTG+TGG - chr5_3:28867198-28867217 None:intergenic 45.0%
ACACGACTTGCCAAACTTGA+AGG + chr5_3:28867197-28867216 Msa0807470:three_prime_UTR 45.0%
TTGCCAAACTTGAAGGCCTT+GGG + chr5_3:28867204-28867223 Msa0807470:three_prime_UTR 45.0%
AGATGACTGGATGTAGGTCA+GGG + chr5_3:28867244-28867263 Msa0807470:three_prime_UTR 45.0%
CTCACTATGTTCGATCAACC+AGG + chr5_3:28867395-28867414 Msa0807470:three_prime_UTR 45.0%
! TTTTACAATAGCAGTGGCGG+TGG + chr5_3:28863357-28863376 Msa0807470:five_prime_UTR 45.0%
! TCTCTCTAAAAGGGAACTGC+AGG + chr5_3:28863554-28863573 Msa0807470:five_prime_UTR 45.0%
! CTTTCTTTCTTTAGGGAGGG+GGG + chr5_3:28863906-28863925 Msa0807470:intron 45.0%
! TTTCTTTCTTTAGGGAGGGG+GGG + chr5_3:28863907-28863926 Msa0807470:intron 45.0%
GACAGAGAGAAAAAGGGAAC+AGG - chr5_3:28864071-28864090 None:intergenic 45.0%
GCAGAGAGACAGAGAGAAAA+AGG - chr5_3:28864078-28864097 None:intergenic 45.0%
! GTTTGAGGTGGATGGAAATG+AGG + chr5_3:28864243-28864262 Msa0807470:CDS 45.0%
ATGCCACCTGATTGGAGATT+TGG + chr5_3:28864292-28864311 Msa0807470:CDS 45.0%
ATGTTCATCTGCCTCAATGG+TGG + chr5_3:28864393-28864412 Msa0807470:CDS 45.0%
!!! GATGGGTTTGGTTTTGGAAG+AGG + chr5_3:28864517-28864536 Msa0807470:CDS 45.0%
!!! GGGGATGGTTTTTTACCGAA+TGG + chr5_3:28864598-28864617 Msa0807470:CDS 45.0%
!! GTTTTATTGAAAGGGCTGCG+AGG + chr5_3:28864668-28864687 Msa0807470:CDS 45.0%
TGGAGGGAATTTCAGTGATG+TGG + chr5_3:28864705-28864724 Msa0807470:CDS 45.0%
AGTGATGTGGTGAACGCTTA+TGG + chr5_3:28864718-28864737 Msa0807470:CDS 45.0%
GTGATGTGGTGAACGCTTAT+GGG + chr5_3:28864719-28864738 Msa0807470:CDS 45.0%
TGATGTGGTGAACGCTTATG+GGG + chr5_3:28864720-28864739 Msa0807470:CDS 45.0%
TTATGGGGTTCCTCAATCCA+TGG + chr5_3:28864735-28864754 Msa0807470:CDS 45.0%
CCGGTTCAATTCATGGAACT+AGG + chr5_3:28864767-28864786 Msa0807470:CDS 45.0%
AGACTTCGAGTAGCAAATGG+AGG + chr5_3:28864808-28864827 Msa0807470:CDS 45.0%
GGATCATCACTCTCTTGTGT+TGG - chr5_3:28864835-28864854 None:intergenic 45.0%
AGAGAGTGATGATCCGAATG+TGG + chr5_3:28864840-28864859 Msa0807470:CDS 45.0%
GTAGCTGCTTCAACCACATT+CGG - chr5_3:28864856-28864875 None:intergenic 45.0%
GTGGTTGAAGCAGCTACAAA+AGG + chr5_3:28864859-28864878 Msa0807470:CDS 45.0%
GTCACCATCTGTTGAGCAAT+TGG + chr5_3:28864885-28864904 Msa0807470:CDS 45.0%
GTAGCCAATTGCTCAACAGA+TGG - chr5_3:28864892-28864911 None:intergenic 45.0%
GAATGATAAAAGCGAGGGTC+GGG + chr5_3:28864930-28864949 Msa0807470:CDS 45.0%
TGATTCCGACAGAGGTGAAT+CGG + chr5_3:28864999-28865018 Msa0807470:CDS 45.0%
ACAAGATGGTTCCCCAATGT+TGG + chr5_3:28865047-28865066 Msa0807470:CDS 45.0%
AGTGGAGAGCCTTCTATGAA+AGG + chr5_3:28865081-28865100 Msa0807470:CDS 45.0%
AACCCTGAGAACCAACAGAA+GGG + chr5_3:28865281-28865300 Msa0807470:CDS 45.0%
GAAGCCTTCATTGTCGAACT+TGG - chr5_3:28865317-28865336 None:intergenic 45.0%
AGTTCGACAATGAAGGCTTC+TGG + chr5_3:28865317-28865336 Msa0807470:CDS 45.0%
GTTCGACAATGAAGGCTTCT+GGG + chr5_3:28865318-28865337 Msa0807470:CDS 45.0%
! TTCTGGGAAGAATGCCAAAC+AGG + chr5_3:28865334-28865353 Msa0807470:CDS 45.0%
TCTGGGAAGAATGCCAAACA+GGG + chr5_3:28865335-28865354 Msa0807470:CDS 45.0%
TGTATCTTACCCTCTCTGCA+AGG - chr5_3:28865439-28865458 None:intergenic 45.0%
! ATTTTCACTGCAGGTGAGGA+GGG + chr5_3:28865517-28865536 Msa0807470:intron 45.0%
TGTTGATGTTTGCAGGTCAC+TGG + chr5_3:28865681-28865700 Msa0807470:intron 45.0%
ATGTTTGCAGGTCACTGGTA+AGG + chr5_3:28865686-28865705 Msa0807470:intron 45.0%
GTCACTTCAACGACAAGTTG+AGG + chr5_3:28865743-28865762 Msa0807470:intron 45.0%
GGAAATCCTAGTGTGGATGA+AGG - chr5_3:28866323-28866342 None:intergenic 45.0%
! CTCTAGAGGAAATCCTAGTG+TGG - chr5_3:28866330-28866349 None:intergenic 45.0%
GGTTGAGATGGATGTAATGG+AGG - chr5_3:28866368-28866387 None:intergenic 45.0%
CCTGGTTGAGATGGATGTAA+TGG - chr5_3:28866371-28866390 None:intergenic 45.0%
CCATTACATCCATCTCAACC+AGG + chr5_3:28866368-28866387 Msa0807470:three_prime_UTR 45.0%
TGAATCATCCCTGGTTGAGA+TGG - chr5_3:28866380-28866399 None:intergenic 45.0%
TTCTTCGAAGGATATCGGAC+GGG - chr5_3:28866427-28866446 None:intergenic 45.0%
GTTCTTCGAAGGATATCGGA+CGG - chr5_3:28866428-28866447 None:intergenic 45.0%
ACACAGTTAACACCGTTGAG+TGG + chr5_3:28866455-28866474 Msa0807470:three_prime_UTR 45.0%
TCCTTGAATCCTCCACTCAA+CGG - chr5_3:28866470-28866489 None:intergenic 45.0%
AGGATTCAAGGAGCCAAATC+AGG + chr5_3:28866478-28866497 Msa0807470:three_prime_UTR 45.0%
! TGCTTTAGATGCCTGATGTG+TGG + chr5_3:28866748-28866767 Msa0807470:intron 45.0%
! GCTTTAGATGCCTGATGTGT+GGG + chr5_3:28866749-28866768 Msa0807470:intron 45.0%
TCCACATCTTGGCTACTCAT+GGG - chr5_3:28866822-28866841 None:intergenic 45.0%
ATCCACATCTTGGCTACTCA+TGG - chr5_3:28866823-28866842 None:intergenic 45.0%
ATGAGTAGCCAAGATGTGGA+TGG + chr5_3:28866822-28866841 Msa0807470:three_prime_UTR 45.0%
!! ACCGGAGGGAGTATTTGTTT+GGG - chr5_3:28866857-28866876 None:intergenic 45.0%
!! TTTCATCTGATTTGCTGCCG+TGG - chr5_3:28867078-28867097 None:intergenic 45.0%
! TTCAAGTTTGGCAAGTCGTG+TGG - chr5_3:28867198-28867217 None:intergenic 45.0%
ACACGACTTGCCAAACTTGA+AGG + chr5_3:28867197-28867216 Msa0807470:three_prime_UTR 45.0%
TTGCCAAACTTGAAGGCCTT+GGG + chr5_3:28867204-28867223 Msa0807470:three_prime_UTR 45.0%
AGATGACTGGATGTAGGTCA+GGG + chr5_3:28867244-28867263 Msa0807470:three_prime_UTR 45.0%
CTCACTATGTTCGATCAACC+AGG + chr5_3:28867395-28867414 Msa0807470:three_prime_UTR 45.0%
!!! AATGAAATTTTTTTAAAAAA+AGG - chr5_3:28863723-28863742 None:intergenic 5.0%
!!! AATGAAATTTTTTTAAAAAA+AGG - chr5_3:28863723-28863742 None:intergenic 5.0%
! CAGGGTGCTAAAAGTAGCAC+AGG + chr5_3:28863647-28863666 Msa0807470:five_prime_UTR 50.0%
TGAGGTGGATGGAAATGAGG+AGG + chr5_3:28864246-28864265 Msa0807470:CDS 50.0%
CTAGTGGTATGCCACCTGAT+TGG + chr5_3:28864284-28864303 Msa0807470:CDS 50.0%
GCACCAAATCTCCAATCAGG+TGG - chr5_3:28864298-28864317 None:intergenic 50.0%
!!! GGGTTTGGTTTTGGAAGAGG+TGG + chr5_3:28864520-28864539 Msa0807470:CDS 50.0%
GGAAGAGGTGGTCATGATCA+TGG + chr5_3:28864532-28864551 Msa0807470:CDS 50.0%
!!! AGGTTCTCGTGTTTTGGTGG+AGG + chr5_3:28864688-28864707 Msa0807470:CDS 50.0%
!!! GGTTCTCGTGTTTTGGTGGA+GGG + chr5_3:28864689-28864708 Msa0807470:CDS 50.0%
! GCATACATCGCCATGGATTG+AGG - chr5_3:28864748-28864767 None:intergenic 50.0%
CAATCCATGGCGATGTATGC+CGG + chr5_3:28864748-28864767 Msa0807470:CDS 50.0%
CTTCCCTTCATCTTGAGACC+CGG - chr5_3:28864956-28864975 None:intergenic 50.0%
GATTCCGACAGAGGTGAATC+GGG + chr5_3:28865000-28865019 Msa0807470:CDS 50.0%
GATGGTTCCCCAATGTTGGA+AGG + chr5_3:28865051-28865070 Msa0807470:CDS 50.0%
CAACCCTGAGAACCAACAGA+AGG + chr5_3:28865280-28865299 Msa0807470:CDS 50.0%
!! CACCCTTCTGTTGGTTCTCA+GGG - chr5_3:28865286-28865305 None:intergenic 50.0%
!! TCACCCTTCTGTTGGTTCTC+AGG - chr5_3:28865287-28865306 None:intergenic 50.0%
GTTGTTGGTCACCCTTCTGT+TGG - chr5_3:28865295-28865314 None:intergenic 50.0%
ACATACATGTTAGGGCTCGC+CGG + chr5_3:28865390-28865409 Msa0807470:CDS 50.0%
TTACCCTCTCTGCAAGGCTA+TGG - chr5_3:28865433-28865452 None:intergenic 50.0%
! CTGGATTTTCACTGCAGGTG+AGG + chr5_3:28865513-28865532 Msa0807470:intron 50.0%
! GATTTTCACTGCAGGTGAGG+AGG + chr5_3:28865516-28865535 Msa0807470:intron 50.0%
TGCAACAGTAAATCCACGGC+TGG + chr5_3:28866146-28866165 Msa0807470:CDS 50.0%
CAGTTAACACCGTTGAGTGG+AGG + chr5_3:28866458-28866477 Msa0807470:three_prime_UTR 50.0%
ACCGTTGAGTGGAGGATTCA+AGG + chr5_3:28866466-28866485 Msa0807470:three_prime_UTR 50.0%
CACAGTTCTTGCAGCTGCAA+TGG - chr5_3:28866511-28866530 None:intergenic 50.0%
TTAGATGCCTGATGTGTGGG+CGG + chr5_3:28866752-28866771 Msa0807470:intron 50.0%
TCCCATGAGTAGCCAAGATG+TGG + chr5_3:28866818-28866837 Msa0807470:three_prime_UTR 50.0%
!! CCGGAGGGAGTATTTGTTTG+GGG - chr5_3:28866856-28866875 None:intergenic 50.0%
CCCCAAACAAATACTCCCTC+CGG + chr5_3:28866853-28866872 Msa0807470:intron 50.0%
!! GACCGGAGGGAGTATTTGTT+TGG - chr5_3:28866858-28866877 None:intergenic 50.0%
ACACGCTCTTGTAGGTACCA+CGG + chr5_3:28867058-28867077 Msa0807470:intron 50.0%
CTTGCCAAACTTGAAGGCCT+TGG + chr5_3:28867203-28867222 Msa0807470:three_prime_UTR 50.0%
TGCCAAACTTGAAGGCCTTG+GGG + chr5_3:28867205-28867224 Msa0807470:three_prime_UTR 50.0%
CCTACATCCAGTCATCTGCA+GGG - chr5_3:28867241-28867260 None:intergenic 50.0%
ACCTACATCCAGTCATCTGC+AGG - chr5_3:28867242-28867261 None:intergenic 50.0%
CAGATGACTGGATGTAGGTC+AGG + chr5_3:28867243-28867262 Msa0807470:three_prime_UTR 50.0%
! CAGGGTGCTAAAAGTAGCAC+AGG + chr5_3:28863647-28863666 Msa0807470:five_prime_UTR 50.0%
TGAGGTGGATGGAAATGAGG+AGG + chr5_3:28864246-28864265 Msa0807470:CDS 50.0%
CTAGTGGTATGCCACCTGAT+TGG + chr5_3:28864284-28864303 Msa0807470:CDS 50.0%
GCACCAAATCTCCAATCAGG+TGG - chr5_3:28864298-28864317 None:intergenic 50.0%
!!! GGGTTTGGTTTTGGAAGAGG+TGG + chr5_3:28864520-28864539 Msa0807470:CDS 50.0%
GGAAGAGGTGGTCATGATCA+TGG + chr5_3:28864532-28864551 Msa0807470:CDS 50.0%
!!! AGGTTCTCGTGTTTTGGTGG+AGG + chr5_3:28864688-28864707 Msa0807470:CDS 50.0%
!!! GGTTCTCGTGTTTTGGTGGA+GGG + chr5_3:28864689-28864708 Msa0807470:CDS 50.0%
! GCATACATCGCCATGGATTG+AGG - chr5_3:28864748-28864767 None:intergenic 50.0%
CAATCCATGGCGATGTATGC+CGG + chr5_3:28864748-28864767 Msa0807470:CDS 50.0%
CTTCCCTTCATCTTGAGACC+CGG - chr5_3:28864956-28864975 None:intergenic 50.0%
GATTCCGACAGAGGTGAATC+GGG + chr5_3:28865000-28865019 Msa0807470:CDS 50.0%
GATGGTTCCCCAATGTTGGA+AGG + chr5_3:28865051-28865070 Msa0807470:CDS 50.0%
CAACCCTGAGAACCAACAGA+AGG + chr5_3:28865280-28865299 Msa0807470:CDS 50.0%
!! CACCCTTCTGTTGGTTCTCA+GGG - chr5_3:28865286-28865305 None:intergenic 50.0%
!! TCACCCTTCTGTTGGTTCTC+AGG - chr5_3:28865287-28865306 None:intergenic 50.0%
GTTGTTGGTCACCCTTCTGT+TGG - chr5_3:28865295-28865314 None:intergenic 50.0%
ACATACATGTTAGGGCTCGC+CGG + chr5_3:28865390-28865409 Msa0807470:CDS 50.0%
TTACCCTCTCTGCAAGGCTA+TGG - chr5_3:28865433-28865452 None:intergenic 50.0%
! CTGGATTTTCACTGCAGGTG+AGG + chr5_3:28865513-28865532 Msa0807470:intron 50.0%
! GATTTTCACTGCAGGTGAGG+AGG + chr5_3:28865516-28865535 Msa0807470:intron 50.0%
TGCAACAGTAAATCCACGGC+TGG + chr5_3:28866146-28866165 Msa0807470:CDS 50.0%
CAGTTAACACCGTTGAGTGG+AGG + chr5_3:28866458-28866477 Msa0807470:three_prime_UTR 50.0%
ACCGTTGAGTGGAGGATTCA+AGG + chr5_3:28866466-28866485 Msa0807470:three_prime_UTR 50.0%
CACAGTTCTTGCAGCTGCAA+TGG - chr5_3:28866511-28866530 None:intergenic 50.0%
TTAGATGCCTGATGTGTGGG+CGG + chr5_3:28866752-28866771 Msa0807470:intron 50.0%
TCCCATGAGTAGCCAAGATG+TGG + chr5_3:28866818-28866837 Msa0807470:three_prime_UTR 50.0%
!! CCGGAGGGAGTATTTGTTTG+GGG - chr5_3:28866856-28866875 None:intergenic 50.0%
CCCCAAACAAATACTCCCTC+CGG + chr5_3:28866853-28866872 Msa0807470:intron 50.0%
!! GACCGGAGGGAGTATTTGTT+TGG - chr5_3:28866858-28866877 None:intergenic 50.0%
ACACGCTCTTGTAGGTACCA+CGG + chr5_3:28867058-28867077 Msa0807470:intron 50.0%
CTTGCCAAACTTGAAGGCCT+TGG + chr5_3:28867203-28867222 Msa0807470:three_prime_UTR 50.0%
TGCCAAACTTGAAGGCCTTG+GGG + chr5_3:28867205-28867224 Msa0807470:three_prime_UTR 50.0%
CCTACATCCAGTCATCTGCA+GGG - chr5_3:28867241-28867260 None:intergenic 50.0%
ACCTACATCCAGTCATCTGC+AGG - chr5_3:28867242-28867261 None:intergenic 50.0%
CAGATGACTGGATGTAGGTC+AGG + chr5_3:28867243-28867262 Msa0807470:three_prime_UTR 50.0%
! GCTGCGAGGTTCTCGTGTTT+TGG + chr5_3:28864682-28864701 Msa0807470:CDS 55.0%
!! GCGAGGTTCTCGTGTTTTGG+TGG + chr5_3:28864685-28864704 Msa0807470:CDS 55.0%
TGAACCGGCATACATCGCCA+TGG - chr5_3:28864755-28864774 None:intergenic 55.0%
GGAACTAGGGATGCTCTTGC+AGG + chr5_3:28864781-28864800 Msa0807470:CDS 55.0%
GTCACCCGATTCACCTCTGT+CGG - chr5_3:28865007-28865026 None:intergenic 55.0%
GGTGAATCGGGTGACGATGA+TGG + chr5_3:28865012-28865031 Msa0807470:CDS 55.0%
! GAATCGGGTGACGATGATGG+TGG + chr5_3:28865015-28865034 Msa0807470:CDS 55.0%
CATACATGTTAGGGCTCGCC+GGG + chr5_3:28865391-28865410 Msa0807470:CDS 55.0%
ATACATGTTAGGGCTCGCCG+GGG + chr5_3:28865392-28865411 Msa0807470:CDS 55.0%
! GGCTGTTTGTTGCTTGACCC+CGG - chr5_3:28865412-28865431 None:intergenic 55.0%
! ACAGCCATAGCCTTGCAGAG+AGG + chr5_3:28865426-28865445 Msa0807470:CDS 55.0%
! CAGCCATAGCCTTGCAGAGA+GGG + chr5_3:28865427-28865446 Msa0807470:CDS 55.0%
ACTTGTGCCTGGATGCAGCA+AGG + chr5_3:28865574-28865593 Msa0807470:intron 55.0%
AAAGCCACCTTGCTGCATCC+AGG - chr5_3:28865584-28865603 None:intergenic 55.0%
CACTGGTAAGGCAGTGATGC+TGG + chr5_3:28865698-28865717 Msa0807470:intron 55.0%
CAGATTCTTCACCAACGGCC+TGG + chr5_3:28866296-28866315 Msa0807470:intron 55.0%
CCTAGTGTGGATGAAGGACC+AGG - chr5_3:28866317-28866336 None:intergenic 55.0%
CCTGGTCCTTCATCCACACT+AGG + chr5_3:28866314-28866333 Msa0807470:three_prime_UTR 55.0%
! TCGGACGGGTTTGCCATGTT+TGG - chr5_3:28866413-28866432 None:intergenic 55.0%
GCCAAACTTGAAGGCCTTGG+GGG + chr5_3:28867206-28867225 Msa0807470:three_prime_UTR 55.0%
! ACCCCCAAGGCCTTCAAGTT+TGG - chr5_3:28867210-28867229 None:intergenic 55.0%
AGTCACACCCTGCAGATGAC+TGG + chr5_3:28867231-28867250 Msa0807470:three_prime_UTR 55.0%
CCCTGCAGATGACTGGATGT+AGG + chr5_3:28867238-28867257 Msa0807470:three_prime_UTR 55.0%
! GCTGCGAGGTTCTCGTGTTT+TGG + chr5_3:28864682-28864701 Msa0807470:CDS 55.0%
!! GCGAGGTTCTCGTGTTTTGG+TGG + chr5_3:28864685-28864704 Msa0807470:CDS 55.0%
TGAACCGGCATACATCGCCA+TGG - chr5_3:28864755-28864774 None:intergenic 55.0%
GGAACTAGGGATGCTCTTGC+AGG + chr5_3:28864781-28864800 Msa0807470:CDS 55.0%
GTCACCCGATTCACCTCTGT+CGG - chr5_3:28865007-28865026 None:intergenic 55.0%
GGTGAATCGGGTGACGATGA+TGG + chr5_3:28865012-28865031 Msa0807470:CDS 55.0%
! GAATCGGGTGACGATGATGG+TGG + chr5_3:28865015-28865034 Msa0807470:CDS 55.0%
CATACATGTTAGGGCTCGCC+GGG + chr5_3:28865391-28865410 Msa0807470:CDS 55.0%
ATACATGTTAGGGCTCGCCG+GGG + chr5_3:28865392-28865411 Msa0807470:CDS 55.0%
! GGCTGTTTGTTGCTTGACCC+CGG - chr5_3:28865412-28865431 None:intergenic 55.0%
! ACAGCCATAGCCTTGCAGAG+AGG + chr5_3:28865426-28865445 Msa0807470:CDS 55.0%
! CAGCCATAGCCTTGCAGAGA+GGG + chr5_3:28865427-28865446 Msa0807470:CDS 55.0%
ACTTGTGCCTGGATGCAGCA+AGG + chr5_3:28865574-28865593 Msa0807470:intron 55.0%
AAAGCCACCTTGCTGCATCC+AGG - chr5_3:28865584-28865603 None:intergenic 55.0%
CACTGGTAAGGCAGTGATGC+TGG + chr5_3:28865698-28865717 Msa0807470:intron 55.0%
CAGATTCTTCACCAACGGCC+TGG + chr5_3:28866296-28866315 Msa0807470:intron 55.0%
CCTAGTGTGGATGAAGGACC+AGG - chr5_3:28866317-28866336 None:intergenic 55.0%
CCTGGTCCTTCATCCACACT+AGG + chr5_3:28866314-28866333 Msa0807470:three_prime_UTR 55.0%
! TCGGACGGGTTTGCCATGTT+TGG - chr5_3:28866413-28866432 None:intergenic 55.0%
GCCAAACTTGAAGGCCTTGG+GGG + chr5_3:28867206-28867225 Msa0807470:three_prime_UTR 55.0%
! ACCCCCAAGGCCTTCAAGTT+TGG - chr5_3:28867210-28867229 None:intergenic 55.0%
AGTCACACCCTGCAGATGAC+TGG + chr5_3:28867231-28867250 Msa0807470:three_prime_UTR 55.0%
CCCTGCAGATGACTGGATGT+AGG + chr5_3:28867238-28867257 Msa0807470:three_prime_UTR 55.0%
GATAAAAGCGAGGGTCGGGC+CGG + chr5_3:28864934-28864953 Msa0807470:CDS 60.0%
ATAAAAGCGAGGGTCGGGCC+GGG + chr5_3:28864935-28864954 Msa0807470:CDS 60.0%
GGGCCGGGTCTCAAGATGAA+GGG + chr5_3:28864950-28864969 Msa0807470:CDS 60.0%
!! GGTGACGATGATGGTGGTCG+TGG + chr5_3:28865021-28865040 Msa0807470:CDS 60.0%
!! GACGATGATGGTGGTCGTGG+TGG + chr5_3:28865024-28865043 Msa0807470:CDS 60.0%
!! GGTGGTCGTGGTGGACAAGA+TGG + chr5_3:28865033-28865052 Msa0807470:CDS 60.0%
TGTGCCTGGATGCAGCAAGG+TGG + chr5_3:28865577-28865596 Msa0807470:intron 60.0%
TGGATGAAGGACCAGGCCGT+TGG - chr5_3:28866310-28866329 None:intergenic 60.0%
CAGGGTGTGACTTACCCCCA+AGG - chr5_3:28867223-28867242 None:intergenic 60.0%
GATAAAAGCGAGGGTCGGGC+CGG + chr5_3:28864934-28864953 Msa0807470:CDS 60.0%
ATAAAAGCGAGGGTCGGGCC+GGG + chr5_3:28864935-28864954 Msa0807470:CDS 60.0%
GGGCCGGGTCTCAAGATGAA+GGG + chr5_3:28864950-28864969 Msa0807470:CDS 60.0%
!! GGTGACGATGATGGTGGTCG+TGG + chr5_3:28865021-28865040 Msa0807470:CDS 60.0%
!! GACGATGATGGTGGTCGTGG+TGG + chr5_3:28865024-28865043 Msa0807470:CDS 60.0%
!! GGTGGTCGTGGTGGACAAGA+TGG + chr5_3:28865033-28865052 Msa0807470:CDS 60.0%
TGTGCCTGGATGCAGCAAGG+TGG + chr5_3:28865577-28865596 Msa0807470:intron 60.0%
TGGATGAAGGACCAGGCCGT+TGG - chr5_3:28866310-28866329 None:intergenic 60.0%
CAGGGTGTGACTTACCCCCA+AGG - chr5_3:28867223-28867242 None:intergenic 60.0%
CGGGCCGGGTCTCAAGATGA+AGG + chr5_3:28864949-28864968 Msa0807470:CDS 65.0%
AGCTCGTCCGCCCACACATC+AGG - chr5_3:28866762-28866781 None:intergenic 65.0%
CGGGCCGGGTCTCAAGATGA+AGG + chr5_3:28864949-28864968 Msa0807470:CDS 65.0%
AGCTCGTCCGCCCACACATC+AGG - chr5_3:28866762-28866781 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 28863338 28867445 28863338 ID=Msa0807470;Name=Msa0807470
chr5_3 mRNA 28863338 28867445 28863338 ID=Msa0807470-mRNA-1;Parent=Msa0807470;Name=Msa0807470-mRNA-1;_AED=0.12;_eAED=0.12;_QI=457|0.75|0.88|1|0.62|0.55|9|682|399
chr5_3 exon 28863338 28863681 28863338 ID=Msa0807470-mRNA-1:exon:10144;Parent=Msa0807470-mRNA-1
chr5_3 exon 28863920 28864000 28863920 ID=Msa0807470-mRNA-1:exon:10145;Parent=Msa0807470-mRNA-1
chr5_3 exon 28864194 28865137 28864194 ID=Msa0807470-mRNA-1:exon:10146;Parent=Msa0807470-mRNA-1
chr5_3 exon 28865221 28865448 28865221 ID=Msa0807470-mRNA-1:exon:10147;Parent=Msa0807470-mRNA-1
chr5_3 exon 28865696 28865702 28865696 ID=Msa0807470-mRNA-1:exon:10148;Parent=Msa0807470-mRNA-1
chr5_3 exon 28866129 28866200 28866129 ID=Msa0807470-mRNA-1:exon:10149;Parent=Msa0807470-mRNA-1
chr5_3 exon 28866299 28866499 28866299 ID=Msa0807470-mRNA-1:exon:10150;Parent=Msa0807470-mRNA-1
chr5_3 exon 28866756 28866843 28866756 ID=Msa0807470-mRNA-1:exon:10151;Parent=Msa0807470-mRNA-1
chr5_3 exon 28867072 28867445 28867072 ID=Msa0807470-mRNA-1:exon:10152;Parent=Msa0807470-mRNA-1
chr5_3 five_prime_UTR 28863338 28863681 28863338 ID=Msa0807470-mRNA-1:five_prime_utr;Parent=Msa0807470-mRNA-1
chr5_3 five_prime_UTR 28863920 28864000 28863920 ID=Msa0807470-mRNA-1:five_prime_utr;Parent=Msa0807470-mRNA-1
chr5_3 five_prime_UTR 28864194 28864225 28864194 ID=Msa0807470-mRNA-1:five_prime_utr;Parent=Msa0807470-mRNA-1
chr5_3 CDS 28864226 28865137 28864226 ID=Msa0807470-mRNA-1:cds;Parent=Msa0807470-mRNA-1
chr5_3 CDS 28865221 28865448 28865221 ID=Msa0807470-mRNA-1:cds;Parent=Msa0807470-mRNA-1
chr5_3 CDS 28865696 28865702 28865696 ID=Msa0807470-mRNA-1:cds;Parent=Msa0807470-mRNA-1
chr5_3 CDS 28866129 28866181 28866129 ID=Msa0807470-mRNA-1:cds;Parent=Msa0807470-mRNA-1
chr5_3 three_prime_UTR 28866182 28866200 28866182 ID=Msa0807470-mRNA-1:three_prime_utr;Parent=Msa0807470-mRNA-1
chr5_3 three_prime_UTR 28866299 28866499 28866299 ID=Msa0807470-mRNA-1:three_prime_utr;Parent=Msa0807470-mRNA-1
chr5_3 three_prime_UTR 28866756 28866843 28866756 ID=Msa0807470-mRNA-1:three_prime_utr;Parent=Msa0807470-mRNA-1
chr5_3 three_prime_UTR 28867072 28867445 28867072 ID=Msa0807470-mRNA-1:three_prime_utr;Parent=Msa0807470-mRNA-1
Gene Sequence

>Msa0807470

ATGAGTGACAAAGAAAAGTTTGAGGTGGATGGAAATGAGGAGGATCCTATGAGTTATTCTAGTGGTATGCCACCTGATTGGAGATTTGGTGCAAATTCATCTGTTGGGTTGGTTTCAATTGGGAATTCTATGAGTATGAATAGAGGGGATTTTATTGGTTCTTCATCATGTTCATCTGCCTCAATGGTGGATTCATTTAGTCCTAACTTTTGGGACCATTCATCGAATTCACAAAACATGGGATTTTGTGACATTAATGGGAGTTCTTCAAATACAATTGGAATTAGGAAAGATGGGTTTGGTTTTGGAAGAGGTGGTCATGATCATGGAACACTTGAAATTGGTTGGAACCAGGCTAATACTATGATGAAAGGGGATGGTTTTTTACCGAATGGACAAGGGATTTTTCCTCAGAGTTTATCTCAGTTTCCTACTGATTCTGGTTTTATTGAAAGGGCTGCGAGGTTCTCGTGTTTTGGTGGAGGGAATTTCAGTGATGTGGTGAACGCTTATGGGGTTCCTCAATCCATGGCGATGTATGCCGGTTCAATTCATGGAACTAGGGATGCTCTTGCAGGCGTTAGACTTCGAGTAGCAAATGGAGGACCAACACAAGAGAGTGATGATCCGAATGTGGTTGAAGCAGCTACAAAAGGTGTGTCACCATCTGTTGAGCAATTGGCTACTAGAGAAAGTCCTTTGAAGAATGATAAAAGCGAGGGTCGGGCCGGGTCTCAAGATGAAGGGAAGCAAGCTCTTGTTCAGAATGTTAATGATTCCGACAGAGGTGAATCGGGTGACGATGATGGTGGTCGTGGTGGACAAGATGGTTCCCCAATGTTGGAAGGTACTACTAGTGGAGAGCCTTCTATGAAAGGACTAAACTCGAAGAAAAGGAAAAAAAGTGGACAGGATGCTGATAATGATAAACCCAGTAGAGCTCAAGAACTACAAAATGAAGGTGCAAAGGACAACCCTGAGAACCAACAGAAGGGTGACCAACAACCAAGTTCGACAATGAAGGCTTCTGGGAAGAATGCCAAACAGGGCTCTCAAAATTCTGATCCACCTAAGGAGGAATACATACATGTTAGGGCTCGCCGGGGTCAAGCAACAAACAGCCATAGCCTTGCAGAGAGGGTCACTGTTTTTGTCCATGAAACTTGCAACAGTAAATCCACGGCTGGATTTCAATATTGA
Protein sequence

>Msa0807470

MSDKEKFEVDGNEEDPMSYSSGMPPDWRFGANSSVGLVSIGNSMSMNRGDFIGSSSCSSASMVDSFSPNFWDHSSNSQNMGFCDINGSSSNTIGIRKDGFGFGRGGHDHGTLEIGWNQANTMMKGDGFLPNGQGIFPQSLSQFPTDSGFIERAARFSCFGGGNFSDVVNAYGVPQSMAMYAGSIHGTRDALAGVRLRVANGGPTQESDDPNVVEAATKGVSPSVEQLATRESPLKNDKSEGRAGSQDEGKQALVQNVNDSDRGESGDDDGGRGGQDGSPMLEGTTSGEPSMKGLNSKKRKKSGQDADNDKPSRAQELQNEGAKDNPENQQKGDQQPSSTMKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSLAERVTVFVHETCNSKSTAGFQY*