Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191820 | XP_024637313.2 | 98.214 | 392 | 7 | 0 | 1 | 392 | 1 | 392 | 0.0 | 779 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191820 | sp|Q9SLA8|FABI_ARATH | 74.935 | 387 | 96 | 1 | 1 | 386 | 1 | 387 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191820 | A0A396IA11 | 98.214 | 392 | 7 | 0 | 1 | 392 | 1 | 392 | 0.0 | 779 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615640 | Msa1191820 | 0.826307 | 2.914795e-54 | -8.615850e-47 |
| Msa0687460 | Msa1191820 | 0.886061 | 4.746300e-72 | -8.615850e-47 |
| Msa0374240 | Msa1191820 | 0.814519 | 1.478719e-51 | -8.615850e-47 |
| Msa0469810 | Msa1191820 | 0.813292 | 2.756056e-51 | -8.615850e-47 |
| Msa1191820 | Msa1258460 | 0.808835 | 2.548213e-50 | -8.615850e-47 |
| Msa0515360 | Msa1191820 | 0.821872 | 3.203862e-53 | -8.615850e-47 |
| Msa0552710 | Msa1191820 | 0.963464 | 4.063750e-122 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191820 | MtrunA17_Chr4g0038121 | 98.214 | 392 | 7 | 0 | 1 | 392 | 1 | 392 | 0.0 | 779 |
| Msa1191820 | MtrunA17_Chr7g0234681 | 79.592 | 392 | 80 | 0 | 1 | 392 | 1 | 392 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191820 | AT2G05990.1 | 74.935 | 387 | 96 | 1 | 1 | 386 | 1 | 387 | 0.0 | 583 |
| Msa1191820 | AT2G05990.2 | 74.935 | 387 | 96 | 1 | 1 | 386 | 1 | 387 | 0.0 | 583 |
Find 111 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGCAATGTACAGAATT+TGG | 0.164025 | 8_1:+36623243 | None:intergenic |
| AAATAACCTTTCAAATTAAT+TGG | 0.170444 | 8_1:+36626843 | None:intergenic |
| TTAATTGGCAATCCTGAAAT+TGG | 0.172350 | 8_1:+36626858 | None:intergenic |
| CATTGCCTTTGTCGCAATTT+TGG | 0.179822 | 8_1:+36626902 | None:intergenic |
| ATTACCTGATGGTTCATTAA+TGG | 0.232168 | 8_1:-36625992 | Msa1191820:CDS |
| CATCTATTGCTTACATCTTC+TGG | 0.234437 | 8_1:+36625916 | None:intergenic |
| AGCGAAACAAGTCCAATTTC+AGG | 0.251911 | 8_1:-36626870 | Msa1191820:CDS |
| TTGCAGCAAGATATCCTTTC+CGG | 0.264331 | 8_1:+36624787 | None:intergenic |
| GCTGGAGCTGAAATTCTTCT+TGG | 0.355636 | 8_1:-36626333 | Msa1191820:CDS |
| GCTGCCAAAGTCTTCCTTAA+CGG | 0.394446 | 8_1:+36624957 | None:intergenic |
| TACCTGGACTGTCCATTTGC+TGG | 0.395362 | 8_1:+36625770 | None:intergenic |
| GCAAAATCTCTTGCTGCAGC+TGG | 0.395785 | 8_1:-36626351 | Msa1191820:CDS |
| CTGAAATTCTTCTTGGCACA+TGG | 0.397489 | 8_1:-36626326 | Msa1191820:CDS |
| GGTACTTAATGCTGCTCCTT+GGG | 0.397735 | 8_1:+36623458 | None:intergenic |
| GGTAAAAGAGCGTTTATTGC+TGG | 0.404119 | 8_1:-36626408 | Msa1191820:CDS |
| GAAAGAAATTAATGCCTAGT+AGG | 0.404777 | 8_1:-36623216 | Msa1191820:three_prime_UTR |
| CAGTCCTATATTTAGTGATC+TGG | 0.407629 | 8_1:-36623486 | Msa1191820:CDS |
| GGAAGTGTCGAACAAATGTT+TGG | 0.410324 | 8_1:+36628275 | None:intergenic |
| GAGAACTTAGTAGAAGTTGT+TGG | 0.419400 | 8_1:+36628198 | None:intergenic |
| GATGTGAGCACTGTGGTTCT+TGG | 0.420119 | 8_1:-36627029 | Msa1191820:CDS |
| TTTGCAGCACGACTTCTTAG+TGG | 0.421625 | 8_1:+36623785 | None:intergenic |
| AGAGTTTAATGACTGACAAT+TGG | 0.423983 | 8_1:-36623168 | Msa1191820:three_prime_UTR |
| AAAACAAACAAGCGCTATGC+TGG | 0.427633 | 8_1:-36625795 | Msa1191820:CDS |
| AAATTTCCCACGTCGTAAGC+TGG | 0.427967 | 8_1:+36626119 | None:intergenic |
| AGTCGTGCTGCAAAAGCAAT+TGG | 0.429867 | 8_1:-36623776 | Msa1191820:CDS |
| TGCAGCAAGATATCCTTTCC+GGG | 0.431457 | 8_1:+36624788 | None:intergenic |
| GCTGGTGTGGCTGATGATAA+TGG | 0.434025 | 8_1:-36626390 | Msa1191820:CDS |
| AATTACCAAAGTTTATCCCT+TGG | 0.437748 | 8_1:-36625968 | Msa1191820:CDS |
| ATGTCCAGATCACTAAATAT+AGG | 0.451168 | 8_1:+36623482 | None:intergenic |
| GAGACTACACTGTCTAAGTT+GGG | 0.456735 | 8_1:+36623426 | None:intergenic |
| CTCTTTCTGTAGAGGTGCAT+TGG | 0.459409 | 8_1:+36623721 | None:intergenic |
| ATTTCCATTAATGAACCATC+AGG | 0.460508 | 8_1:+36625988 | None:intergenic |
| TACATGCCTGGGTTAATGAT+TGG | 0.462897 | 8_1:+36624717 | None:intergenic |
| TTCATATGTAACAGAGGAGG+TGG | 0.465333 | 8_1:-36623609 | Msa1191820:intron |
| TGCTATATGCTCAGAAGAGC+AGG | 0.467356 | 8_1:-36623337 | Msa1191820:three_prime_UTR |
| CCACGATCCCACCTTGGACT+TGG | 0.475734 | 8_1:+36627004 | None:intergenic |
| AGTTCACTTGCGCGTGAGAC+GGG | 0.478000 | 8_1:+36628315 | None:intergenic |
| AGCGAAGCAAATACTCTAAG+TGG | 0.478194 | 8_1:+36623404 | None:intergenic |
| GGAAGTTGCTGAATCCGTTA+AGG | 0.478229 | 8_1:-36624971 | Msa1191820:CDS |
| TTACGGTACCTCTGGTCCAT+TGG | 0.479765 | 8_1:+36624909 | None:intergenic |
| TGGTACTTAATGCTGCTCCT+TGG | 0.485147 | 8_1:+36623457 | None:intergenic |
| GGATGTCTCCAGCAGTGGTT+TGG | 0.487037 | 8_1:+36624809 | None:intergenic |
| AGCATCCAAGGGATAAACTT+TGG | 0.487197 | 8_1:+36625963 | None:intergenic |
| GGAGACTACACTGTCTAAGT+TGG | 0.491103 | 8_1:+36623425 | None:intergenic |
| AAAGAAATTAATGCCTAGTA+GGG | 0.491481 | 8_1:-36623215 | Msa1191820:three_prime_UTR |
| TGCATACGAGAGGAAAGCTT+TGG | 0.496451 | 8_1:+36628254 | None:intergenic |
| GCATCAGAGAGGATCATTCC+TGG | 0.496552 | 8_1:-36624318 | Msa1191820:CDS |
| CTTGTCGTCACCTTTAGCAT+CGG | 0.500580 | 8_1:-36623570 | Msa1191820:CDS |
| ATAGGTGACCAAACCACTGC+TGG | 0.506146 | 8_1:-36624817 | Msa1191820:intron |
| ATCTGCCAAAATTGCGACAA+AGG | 0.509695 | 8_1:-36626907 | Msa1191820:CDS |
| GCTGCCATCTTCAATGTGTA+TGG | 0.515768 | 8_1:+36627119 | None:intergenic |
| TGACAATGGTTTGAATGCTA+TGG | 0.518772 | 8_1:-36623522 | Msa1191820:CDS |
| GAATCCGTTAAGGAAGACTT+TGG | 0.520209 | 8_1:-36624961 | Msa1191820:CDS |
| AAAGTCTCTACCACCCTACT+AGG | 0.520612 | 8_1:+36623202 | None:intergenic |
| CTTGTCCACTCTCTTGCCAA+TGG | 0.521270 | 8_1:-36624925 | Msa1191820:CDS |
| GTCTAAGTTGGGGTGAGACT+TGG | 0.521349 | 8_1:+36623437 | None:intergenic |
| TTCCGGGATGTCTCCAGCAG+TGG | 0.524370 | 8_1:+36624804 | None:intergenic |
| TGAGGATTTACCGGCAATGT+AGG | 0.526381 | 8_1:+36628167 | None:intergenic |
| ATGCTTGAGTAAAGAAACAT+AGG | 0.531931 | 8_1:+36624746 | None:intergenic |
| CAGTTCACTTGCGCGTGAGA+CGG | 0.533153 | 8_1:+36628314 | None:intergenic |
| TGATGTAAAGCTCCGTTGGA+AGG | 0.542917 | 8_1:+36626941 | None:intergenic |
| GCTATGCTGGATCCAGCAAA+TGG | 0.542978 | 8_1:-36625782 | Msa1191820:CDS |
| GGATTGCCAATTAATTTGAA+AGG | 0.543647 | 8_1:-36626849 | Msa1191820:intron |
| GACAATGGTTTGAATGCTAT+GGG | 0.544764 | 8_1:-36623521 | Msa1191820:CDS |
| TAATGACTGACAATTGGTTG+AGG | 0.547086 | 8_1:-36623162 | Msa1191820:three_prime_UTR |
| ATGATGATGTAAAGCTCCGT+TGG | 0.551146 | 8_1:+36626937 | None:intergenic |
| TGAAATTCTTCTTGGCACAT+GGG | 0.554722 | 8_1:-36626325 | Msa1191820:CDS |
| CTGCTGCTGCTGCATACGAG+AGG | 0.555555 | 8_1:+36628244 | None:intergenic |
| AACCACTGCTGGAGACATCC+CGG | 0.557664 | 8_1:-36624806 | Msa1191820:CDS |
| CTACAGAAAGAGCTATCAGC+AGG | 0.561168 | 8_1:-36623710 | Msa1191820:intron |
| AGAGTCAACACTATATCTGC+TGG | 0.562777 | 8_1:-36624023 | Msa1191820:intron |
| CTTGGTGCCAAGTCCAAGGT+GGG | 0.564454 | 8_1:-36627011 | Msa1191820:CDS |
| GGTTTGAATGCTATGGGCGT+TGG | 0.565599 | 8_1:-36623515 | Msa1191820:CDS |
| TGGTCTAGATTGCATTACTG+TGG | 0.573217 | 8_1:-36623269 | Msa1191820:three_prime_UTR |
| GCTGATAGCTCTTTCTGTAG+AGG | 0.574157 | 8_1:+36623713 | None:intergenic |
| ATCCAGCAAATGGACAGTCC+AGG | 0.577046 | 8_1:-36625772 | Msa1191820:intron |
| CATACCATACACATTGAAGA+TGG | 0.580143 | 8_1:-36627123 | Msa1191820:exon |
| CATCAGAGAGGATCATTCCT+GGG | 0.580610 | 8_1:-36624317 | Msa1191820:intron |
| CCTTTAGCATCGGCTATCAC+AGG | 0.582392 | 8_1:-36623560 | Msa1191820:CDS |
| TTTATTCCACGATCCCACCT+TGG | 0.585975 | 8_1:+36626998 | None:intergenic |
| CTGGTCCATTGGCAAGAGAG+TGG | 0.587174 | 8_1:+36624920 | None:intergenic |
| TAGTGATCTGGACATTCCCA+AGG | 0.589605 | 8_1:-36623474 | Msa1191820:CDS |
| CATTGGCAAGAGAGTGGACA+AGG | 0.589970 | 8_1:+36624926 | None:intergenic |
| CATCTTCAATGTGTATGGTA+TGG | 0.592572 | 8_1:+36627124 | None:intergenic |
| TTTCTTCCAATCATTAACCC+AGG | 0.594321 | 8_1:-36624723 | Msa1191820:intron |
| GGTTCTTGGTGCCAAGTCCA+AGG | 0.594912 | 8_1:-36627015 | Msa1191820:CDS |
| CTCTCTTGCCAATGGACCAG+AGG | 0.596272 | 8_1:-36624917 | Msa1191820:intron |
| ACCGTTCTATATGTTGACAA+TGG | 0.601081 | 8_1:-36623536 | Msa1191820:CDS |
| TCTTGGTGCCAAGTCCAAGG+TGG | 0.601682 | 8_1:-36627012 | Msa1191820:CDS |
| AATGAAGATAATTGTTATAG+CGG | 0.602441 | 8_1:+36628221 | None:intergenic |
| CATCAGTGCAGCCCTTCCAA+CGG | 0.609144 | 8_1:-36626953 | Msa1191820:CDS |
| ACCATTGTCAACATATAGAA+CGG | 0.609256 | 8_1:+36623535 | None:intergenic |
| CCTGTGATAGCCGATGCTAA+AGG | 0.610330 | 8_1:+36623560 | None:intergenic |
| GTGGCTGATGATAATGGATA+CGG | 0.612029 | 8_1:-36626384 | Msa1191820:CDS |
| CCAAGTCCAAGGTGGGATCG+TGG | 0.612288 | 8_1:-36627004 | Msa1191820:CDS |
| GAAATTAATGCCTAGTAGGG+TGG | 0.614070 | 8_1:-36623212 | Msa1191820:three_prime_UTR |
| TTGAGTCCAGCTTACGACGT+GGG | 0.620943 | 8_1:-36626125 | Msa1191820:CDS |
| AAGAGCGTTTATTGCTGGTG+TGG | 0.626005 | 8_1:-36626403 | Msa1191820:CDS |
| GATGTAAAGCTCCGTTGGAA+GGG | 0.627579 | 8_1:+36626942 | None:intergenic |
| TCATATGTAACAGAGGAGGT+GGG | 0.636128 | 8_1:-36623608 | Msa1191820:intron |
| CTGCTGGAGACATCCCGGAA+AGG | 0.640035 | 8_1:-36624801 | Msa1191820:CDS |
| TGATGATACAGATACGGCGG+TGG | 0.642111 | 8_1:-36624218 | Msa1191820:intron |
| CTGATGATAATGGATACGGA+TGG | 0.656811 | 8_1:-36626380 | Msa1191820:CDS |
| AGACTACACTGTCTAAGTTG+GGG | 0.666950 | 8_1:+36623427 | None:intergenic |
| TGATGATAATGGATACGGAT+GGG | 0.675921 | 8_1:-36626379 | Msa1191820:CDS |
| TTTGAGTCCAGCTTACGACG+TGG | 0.685237 | 8_1:-36626126 | Msa1191820:CDS |
| GACGGGCAATGTAACACGCG+CGG | 0.698793 | 8_1:+36628332 | None:intergenic |
| TCACATACATCGCATCAGAG+AGG | 0.710453 | 8_1:-36624329 | Msa1191820:CDS |
| AAGAACCACAGTGCTCACAT+CGG | 0.713720 | 8_1:+36627031 | None:intergenic |
| AAATGATGATACAGATACGG+CGG | 0.727109 | 8_1:-36624221 | Msa1191820:intron |
| GTTTGCCGATGTGAGCACTG+TGG | 0.800515 | 8_1:-36627036 | Msa1191820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTCAGATAAAAAA+CGG | - | chr8_1:36625200-36625219 | Msa1191820:intron | 10.0% |
| !! | ATTAAAAAAAAAATGAAATG+AGG | + | chr8_1:36625597-36625616 | None:intergenic | 10.0% |
| !! | ATAAAAAAAAATTATATACC+TGG | + | chr8_1:36625736-36625755 | None:intergenic | 10.0% |
| !!! | TTTTAATCTTAAACTGTTTA+CGG | - | chr8_1:36623386-36623405 | Msa1191820:three_prime_UTR | 15.0% |
| !!! | AATGAATAAAAGTTGAATTT+TGG | + | chr8_1:36623419-36623438 | None:intergenic | 15.0% |
| !! | TCATTCAAATACAATTAAAA+AGG | + | chr8_1:36623456-36623475 | None:intergenic | 15.0% |
| !!! | CATAAGTTATTTGATTTTAA+TGG | - | chr8_1:36623631-36623650 | Msa1191820:intron | 15.0% |
| !!! | AACTTATTTTTTTGTCATAT+TGG | - | chr8_1:36623722-36623741 | Msa1191820:CDS | 15.0% |
| !!! | GTTTTTCTATAATGTTTTTA+AGG | - | chr8_1:36623894-36623913 | Msa1191820:intron | 15.0% |
| !! | AAATAACCTTTCAAATTAAT+TGG | + | chr8_1:36624647-36624666 | None:intergenic | 15.0% |
| !! | GAAATAAAATAAAAACTTAC+AGG | + | chr8_1:36625190-36625209 | None:intergenic | 15.0% |
| !!! | TTTTATTTCAGATAAAAAAC+GGG | - | chr8_1:36625201-36625220 | Msa1191820:intron | 15.0% |
| !! | AAAAATAAAAAATCAGTATG+AGG | + | chr8_1:36625654-36625673 | None:intergenic | 15.0% |
| !!! | TCATACTGATTTTTTATTTT+TGG | - | chr8_1:36625653-36625672 | Msa1191820:intron | 15.0% |
| !!! | CATACTGATTTTTTATTTTT+GGG | - | chr8_1:36625654-36625673 | Msa1191820:intron | 15.0% |
| !!! | TGTAATAAATGATTTTCATT+TGG | - | chr8_1:36626320-36626339 | Msa1191820:CDS | 15.0% |
| !!! | GTAATAAATGATTTTCATTT+GGG | - | chr8_1:36626321-36626340 | Msa1191820:CDS | 15.0% |
| !! | TAATAAAAATGTTTGATCTA+TGG | - | chr8_1:36628190-36628209 | Msa1191820:five_prime_UTR | 15.0% |
| !! | AATGAAGATAATTGTTATAG+CGG | + | chr8_1:36623269-36623288 | None:intergenic | 20.0% |
| !!! | TTGTTTAGTTTTAAGTTGTA+AGG | - | chr8_1:36623348-36623367 | Msa1191820:three_prime_UTR | 20.0% |
| !!! | TGTTTAGTTTTAAGTTGTAA+GGG | - | chr8_1:36623349-36623368 | Msa1191820:three_prime_UTR | 20.0% |
| !! | TTTAATCTTAAACTGTTTAC+GGG | - | chr8_1:36623387-36623406 | Msa1191820:three_prime_UTR | 20.0% |
| !!! | TTTTATTCATTTTGCATAAC+TGG | - | chr8_1:36623428-36623447 | Msa1191820:three_prime_UTR | 20.0% |
| !!! | TTTATTCATTTTGCATAACT+GGG | - | chr8_1:36623429-36623448 | Msa1191820:three_prime_UTR | 20.0% |
| !!! | TTTTTGTGACTGTATATAAA+AGG | - | chr8_1:36623667-36623686 | Msa1191820:intron | 20.0% |
| !! | AATAAGCTAAAAACAGATTA+TGG | + | chr8_1:36624116-36624135 | None:intergenic | 20.0% |
| !!! | TGAAAAAATTGGTAGTTAAT+GGG | + | chr8_1:36624757-36624776 | None:intergenic | 20.0% |
| !!! | ATGAAAAAATTGGTAGTTAA+TGG | + | chr8_1:36624758-36624777 | None:intergenic | 20.0% |
| !! | ATAAATGTATCACTTACAAA+AGG | + | chr8_1:36625307-36625326 | None:intergenic | 20.0% |
| !! | AATTATGTTTCTTATTAGCA+AGG | + | chr8_1:36625462-36625481 | None:intergenic | 20.0% |
| !! | ATATAGTGTATTACAAGTTT+AGG | - | chr8_1:36625815-36625834 | Msa1191820:intron | 20.0% |
| !!! | TTTTGTAGGCTTTAATTTAA+TGG | - | chr8_1:36625882-36625901 | Msa1191820:intron | 20.0% |
| !!! | TTTGTAGGCTTTAATTTAAT+GGG | - | chr8_1:36625883-36625902 | Msa1191820:intron | 20.0% |
| !! | ATATCATTCAATTGAAAAGA+TGG | + | chr8_1:36626010-36626029 | None:intergenic | 20.0% |
| !!! | TATATTGCAACTGTATTTTA+AGG | - | chr8_1:36626105-36626124 | Msa1191820:CDS | 20.0% |
| !!! | TAATTTGTTTTATACCATGT+TGG | - | chr8_1:36626177-36626196 | Msa1191820:intron | 20.0% |
| !!! | AATTTGTTTTATACCATGTT+GGG | - | chr8_1:36626178-36626197 | Msa1191820:intron | 20.0% |
| !!! | TAAGCAATTAACTTTGTTAT+AGG | - | chr8_1:36626652-36626671 | Msa1191820:intron | 20.0% |
| !! | AAGGCTAATAAAAAATACTT+TGG | + | chr8_1:36627006-36627025 | None:intergenic | 20.0% |
| !!! | TATTAATTAGATTGTTGACT+AGG | + | chr8_1:36627073-36627092 | None:intergenic | 20.0% |
| ! | TAAAACTAAACAACTAGATG+AGG | + | chr8_1:36623341-36623360 | None:intergenic | 25.0% |
| ! | TTTCAGTTTAGTGAAAATTG+CGG | - | chr8_1:36623571-36623590 | Msa1191820:CDS | 25.0% |
| ! | ACAATGGAACATAAAAATAC+AGG | + | chr8_1:36623963-36623982 | None:intergenic | 25.0% |
| !!! | GTATTTTTATGTTCCATTGT+TGG | - | chr8_1:36623963-36623982 | Msa1191820:intron | 25.0% |
| ! | GATGATTGAGAAATCAATTA+AGG | - | chr8_1:36623990-36624009 | Msa1191820:intron | 25.0% |
| ! | AATTAAGGATGTGTTTGAAT+TGG | - | chr8_1:36624005-36624024 | Msa1191820:intron | 25.0% |
| ! | GAAACAGTTTATAAACACAT+CGG | - | chr8_1:36624085-36624104 | Msa1191820:intron | 25.0% |
| ! | ATTCAAACTGTTTGCATATA+TGG | + | chr8_1:36624179-36624198 | None:intergenic | 25.0% |
| ! | AGTTTCCTGATGTAAATTTA+GGG | - | chr8_1:36624331-36624350 | Msa1191820:CDS | 25.0% |
| ! | TTAAAGCGAGGATAAAAAAA+TGG | + | chr8_1:36624671-36624690 | None:intergenic | 25.0% |
| ! | TTATCCTCGCTTTAATTATT+AGG | - | chr8_1:36624676-36624695 | Msa1191820:intron | 25.0% |
| ! | AAAACCTAATAATTAAAGCG+AGG | + | chr8_1:36624683-36624702 | None:intergenic | 25.0% |
| !! | GAAAAAATTGGTAGTTAATG+GGG | + | chr8_1:36624756-36624775 | None:intergenic | 25.0% |
| ! | TTATCAACAGAAGATAAATC+TGG | + | chr8_1:36624935-36624954 | None:intergenic | 25.0% |
| !! | TTGTAGGCTTTAATTTAATG+GGG | - | chr8_1:36625884-36625903 | Msa1191820:intron | 25.0% |
| !! | TGTTTCTTAAGTGAGTTTTT+GGG | + | chr8_1:36625979-36625998 | None:intergenic | 25.0% |
| !!! | TTGTTTCTTAAGTGAGTTTT+TGG | + | chr8_1:36625980-36625999 | None:intergenic | 25.0% |
| !!! | ATGGAAAAGTATCATAGATT+CGG | + | chr8_1:36626271-36626290 | None:intergenic | 25.0% |
| ! | TGAACATAAGATATATAGCA+AGG | + | chr8_1:36626482-36626501 | None:intergenic | 25.0% |
| ! | GATGCTTATTACTCTATTTA+CGG | + | chr8_1:36626598-36626617 | None:intergenic | 25.0% |
| ! | TACAAAGTCATAAAGAAAGT+CGG | + | chr8_1:36626620-36626639 | None:intergenic | 25.0% |
| ! | AGTTAATTGCTTAATAAAGC+TGG | + | chr8_1:36626645-36626664 | None:intergenic | 25.0% |
| !!! | AATGGAAGCATTATTAGATA+AGG | + | chr8_1:36626796-36626815 | None:intergenic | 25.0% |
| ! | AATAAAGACAGAATTTGACT+AGG | + | chr8_1:36626898-36626917 | None:intergenic | 25.0% |
| ! | TAGTCAAATTCTGTCTTTAT+TGG | - | chr8_1:36626897-36626916 | Msa1191820:CDS | 25.0% |
| ! | AGTCAAATTCTGTCTTTATT+GGG | - | chr8_1:36626898-36626917 | Msa1191820:CDS | 25.0% |
| ! | ACTAAATGATGATACAGATA+CGG | - | chr8_1:36627263-36627282 | Msa1191820:intron | 25.0% |
| ! | ACAACTAAAAATAACTGAGA+CGG | + | chr8_1:36627351-36627370 | None:intergenic | 25.0% |
| !!! | TCTCAGTTATTTTTAGTTGT+TGG | - | chr8_1:36627351-36627370 | Msa1191820:intron | 25.0% |
| !! | ACTTCATTTGATTTAAACGT+AGG | + | chr8_1:36627529-36627548 | None:intergenic | 25.0% |
| ! | TGCAAATAATCAAAAGATTG+AGG | + | chr8_1:36627844-36627863 | None:intergenic | 25.0% |
| !! | TCAATTTTCATATGTAACAG+AGG | - | chr8_1:36627872-36627891 | Msa1191820:intron | 25.0% |
| !!! | ATGTTTGATCTATGGTTTTA+TGG | - | chr8_1:36628198-36628217 | Msa1191820:five_prime_UTR | 25.0% |
| ! | AAAGAAATTAATGCCTAGTA+GGG | - | chr8_1:36628272-36628291 | Msa1191820:five_prime_UTR | 25.0% |
| TACATAAACAAACACAATGC+AGG | + | chr8_1:36623519-36623538 | None:intergenic | 30.0% | |
| ACAAAAACAGGAAAAAAGCT+TGG | + | chr8_1:36623547-36623566 | None:intergenic | 30.0% | |
| AACTGAAACTGAACAAAAAC+AGG | + | chr8_1:36623559-36623578 | None:intergenic | 30.0% | |
| AAAAGCAGCTTAATTATGTG+TGG | + | chr8_1:36623748-36623767 | None:intergenic | 30.0% | |
| ATTGATGCTAAGTTGTTTGT+TGG | - | chr8_1:36623926-36623945 | Msa1191820:intron | 30.0% | |
| TCAATCATCAAATCCAACAA+TGG | + | chr8_1:36623979-36623998 | None:intergenic | 30.0% | |
| TATAAGTGCTTATCCAAACA+AGG | - | chr8_1:36624262-36624281 | Msa1191820:intron | 30.0% | |
| !! | AAAAGACTTAAAGCCTTGTT+TGG | + | chr8_1:36624278-36624297 | None:intergenic | 30.0% |
| CAGTTTCCTGATGTAAATTT+AGG | - | chr8_1:36624330-36624349 | Msa1191820:CDS | 30.0% | |
| AGAAACCCTAAATTTACATC+AGG | + | chr8_1:36624339-36624358 | None:intergenic | 30.0% | |
| TTAATTGGCAATCCTGAAAT+TGG | + | chr8_1:36624632-36624651 | None:intergenic | 30.0% | |
| ! | GGATTGCCAATTAATTTGAA+AGG | - | chr8_1:36624638-36624657 | Msa1191820:intron | 30.0% |
| TTGTAAAATAGCTCCTATAG+CGG | - | chr8_1:36624811-36624830 | Msa1191820:CDS | 30.0% | |
| !! | TAACTGTGAACCATTTTTGT+AGG | - | chr8_1:36625327-36625346 | Msa1191820:intron | 30.0% |
| ATTACCTGATGGTTCATTAA+TGG | - | chr8_1:36625495-36625514 | Msa1191820:intron | 30.0% | |
| ATTTCCATTAATGAACCATC+AGG | + | chr8_1:36625502-36625521 | None:intergenic | 30.0% | |
| AATTACCAAAGTTTATCCCT+TGG | - | chr8_1:36625519-36625538 | Msa1191820:intron | 30.0% | |
| ! | TGTCAGAGTATTATACATGT+GGG | - | chr8_1:36625783-36625802 | Msa1191820:CDS | 30.0% |
| ! | TTTTCTGCTAGATATTTTGC+AGG | - | chr8_1:36625858-36625877 | Msa1191820:intron | 30.0% |
| ! | TGTAGGCTTTAATTTAATGG+GGG | - | chr8_1:36625885-36625904 | Msa1191820:intron | 30.0% |
| ! | GTTTCTTAAGTGAGTTTTTG+GGG | + | chr8_1:36625978-36625997 | None:intergenic | 30.0% |
| ! | TAAGAGCAACTAAAAGTATG+AGG | + | chr8_1:36626062-36626081 | None:intergenic | 30.0% |
| !!! | AACTGTTTTAAAACCCAACA+TGG | + | chr8_1:36626194-36626213 | None:intergenic | 30.0% |
| !! | TGGAAAAGTATCATAGATTC+GGG | + | chr8_1:36626270-36626289 | None:intergenic | 30.0% |
| ! | ATGATACTTTTCCATTCTCA+AGG | - | chr8_1:36626276-36626295 | Msa1191820:intron | 30.0% |
| TCATTTGGGTAATTAAGCAT+AGG | - | chr8_1:36626335-36626354 | Msa1191820:CDS | 30.0% | |
| CATTTGGGTAATTAAGCATA+GGG | - | chr8_1:36626336-36626355 | Msa1191820:CDS | 30.0% | |
| ! | AACTAGATCTCAAGTTCTTT+TGG | - | chr8_1:36626432-36626451 | Msa1191820:intron | 30.0% |
| ATGCTTGAGTAAAGAAACAT+AGG | + | chr8_1:36626744-36626763 | None:intergenic | 30.0% | |
| CGCAAACAAAAACAATAGAA+TGG | + | chr8_1:36626814-36626833 | None:intergenic | 30.0% | |
| TTGTTTGCGTAATCTTTATG+AGG | - | chr8_1:36626825-36626844 | Msa1191820:intron | 30.0% | |
| !! | ATCCATGTTTTCTAGAGATA+TGG | - | chr8_1:36626980-36626999 | Msa1191820:CDS | 30.0% |
| ATTTAAAAATCCCAGTGACA+GGG | + | chr8_1:36627383-36627402 | None:intergenic | 30.0% | |
| AATTTAAAAATCCCAGTGAC+AGG | + | chr8_1:36627384-36627403 | None:intergenic | 30.0% | |
| !!! | AGCTTAATTCATGCTTTTTC+AGG | - | chr8_1:36627406-36627425 | Msa1191820:intron | 30.0% |
| TGATAAAAAGAGAAGTCACA+AGG | + | chr8_1:36627492-36627511 | None:intergenic | 30.0% | |
| ! | CATTTGATTTAAACGTAGGA+AGG | + | chr8_1:36627525-36627544 | None:intergenic | 30.0% |
| CAAGATGAAATTAGTAGAAG+GGG | + | chr8_1:36627606-36627625 | None:intergenic | 30.0% | |
| CCAAGATGAAATTAGTAGAA+GGG | + | chr8_1:36627607-36627626 | None:intergenic | 30.0% | |
| ACCAAGATGAAATTAGTAGA+AGG | + | chr8_1:36627608-36627627 | None:intergenic | 30.0% | |
| ! | ATTTTCATATGTAACAGAGG+AGG | - | chr8_1:36627875-36627894 | Msa1191820:intron | 30.0% |
| ACCATTGTCAACATATAGAA+CGG | + | chr8_1:36627955-36627974 | None:intergenic | 30.0% | |
| ATGTCCAGATCACTAAATAT+AGG | + | chr8_1:36628008-36628027 | None:intergenic | 30.0% | |
| !!! | TATTTGCTTCGCTTTTTTGT+AGG | - | chr8_1:36628093-36628112 | Msa1191820:intron | 30.0% |
| TTCAAGCAATGTACAGAATT+TGG | + | chr8_1:36628247-36628266 | None:intergenic | 30.0% | |
| GAAAGAAATTAATGCCTAGT+AGG | - | chr8_1:36628271-36628290 | Msa1191820:five_prime_UTR | 30.0% | |
| AGAGTTTAATGACTGACAAT+TGG | - | chr8_1:36628319-36628338 | Msa1191820:five_prime_UTR | 30.0% | |
| GAGAACTTAGTAGAAGTTGT+TGG | + | chr8_1:36623292-36623311 | None:intergenic | 35.0% | |
| !! | TCATTTTTCTCCTACATTGC+CGG | - | chr8_1:36623310-36623329 | Msa1191820:three_prime_UTR | 35.0% |
| ACAACTAGATGAGGATTTAC+CGG | + | chr8_1:36623332-36623351 | None:intergenic | 35.0% | |
| ACAAATGACGATATCCAAGT+GGG | + | chr8_1:36623811-36623830 | None:intergenic | 35.0% | |
| GTTACCAACAGCTTAATTAC+GGG | + | chr8_1:36623838-36623857 | None:intergenic | 35.0% | |
| CGTTACCAACAGCTTAATTA+CGG | + | chr8_1:36623839-36623858 | None:intergenic | 35.0% | |
| ! | GCTAAGTTGTTTGTTGGTAA+TGG | - | chr8_1:36623932-36623951 | Msa1191820:intron | 35.0% |
| ! | TAAGCACTTGTGAGACTTTT+AGG | - | chr8_1:36624052-36624071 | Msa1191820:CDS | 35.0% |
| CATCTTCAATGTGTATGGTA+TGG | + | chr8_1:36624366-36624385 | None:intergenic | 35.0% | |
| CATACCATACACATTGAAGA+TGG | - | chr8_1:36624364-36624383 | Msa1191820:intron | 35.0% | |
| ! | TTGGTAGTTAATGGGGAATA+AGG | + | chr8_1:36624749-36624768 | None:intergenic | 35.0% |
| GCGATGTGCTATGAAAAAAT+TGG | + | chr8_1:36624768-36624787 | None:intergenic | 35.0% | |
| TTCTTGCACTAAATAGCGTA+TGG | + | chr8_1:36624790-36624809 | None:intergenic | 35.0% | |
| TCACAGATCGTACAAAATAG+CGG | + | chr8_1:36624873-36624892 | None:intergenic | 35.0% | |
| CTGAAAATAGCGTTATTTGC+AGG | - | chr8_1:36625058-36625077 | Msa1191820:intron | 35.0% | |
| !! | TGATGATAATGGATACGGAT+GGG | - | chr8_1:36625108-36625127 | Msa1191820:intron | 35.0% |
| TGAAATTCTTCTTGGCACAT+GGG | - | chr8_1:36625162-36625181 | Msa1191820:intron | 35.0% | |
| TCAGTCGATACAAATTCACT+TGG | - | chr8_1:36625230-36625249 | Msa1191820:intron | 35.0% | |
| TGTATCACTTACAAAAGGAG+TGG | + | chr8_1:36625302-36625321 | None:intergenic | 35.0% | |
| ATGTTCAGAGCCTACAAAAA+TGG | + | chr8_1:36625340-36625359 | None:intergenic | 35.0% | |
| ! | TTTTCCTTCAGATTACCTGA+TGG | - | chr8_1:36625484-36625503 | Msa1191820:intron | 35.0% |
| TTGTCAAAAACAGCATCCAA+GGG | + | chr8_1:36625538-36625557 | None:intergenic | 35.0% | |
| ATTGTCAAAAACAGCATCCA+AGG | + | chr8_1:36625539-36625558 | None:intergenic | 35.0% | |
| !!! | TGCTGTTTTTGACAATCTTG+AGG | - | chr8_1:36625543-36625562 | Msa1191820:intron | 35.0% |
| CATCTATTGCTTACATCTTC+TGG | + | chr8_1:36625574-36625593 | None:intergenic | 35.0% | |
| ! | TCTTGGTCAAAATGCTCTTT+TGG | - | chr8_1:36625756-36625775 | Msa1191820:intron | 35.0% |
| CATGTATAATACTCTGACAG+TGG | + | chr8_1:36625782-36625801 | None:intergenic | 35.0% | |
| ! | CTGTCAGAGTATTATACATG+TGG | - | chr8_1:36625782-36625801 | Msa1191820:CDS | 35.0% |
| ! | GATATTTTGCAGGCTTTTGT+AGG | - | chr8_1:36625868-36625887 | Msa1191820:intron | 35.0% |
| ! | TTTAATTTAATGGGGGACCA+AGG | - | chr8_1:36625892-36625911 | Msa1191820:intron | 35.0% |
| !! | TCTGGTGTCACATACTATAT+TGG | - | chr8_1:36625921-36625940 | Msa1191820:intron | 35.0% |
| GCTTAAAGATGAGTAGTTGA+AGG | + | chr8_1:36626248-36626267 | None:intergenic | 35.0% | |
| TCATCTTTCTTCCTTGAGAA+TGG | + | chr8_1:36626290-36626309 | None:intergenic | 35.0% | |
| AGCATAGGGTAATTTCTTTC+TGG | - | chr8_1:36626350-36626369 | Msa1191820:CDS | 35.0% | |
| GCATAGGGTAATTTCTTTCT+GGG | - | chr8_1:36626351-36626370 | Msa1191820:CDS | 35.0% | |
| TAATACTTCGTTAGAGTCCA+TGG | + | chr8_1:36626388-36626407 | None:intergenic | 35.0% | |
| !! | ATGTTCATCACTCACTTTTC+AGG | - | chr8_1:36626495-36626514 | Msa1191820:intron | 35.0% |
| TTTCTTCCAATCATTAACCC+AGG | - | chr8_1:36626764-36626783 | Msa1191820:intron | 35.0% | |
| ATTAGATAAGGTACATGCCT+GGG | + | chr8_1:36626784-36626803 | None:intergenic | 35.0% | |
| TATTAGATAAGGTACATGCC+TGG | + | chr8_1:36626785-36626804 | None:intergenic | 35.0% | |
| TGCGTAATCTTTATGAGGTT+TGG | - | chr8_1:36626830-36626849 | Msa1191820:intron | 35.0% | |
| GCGTAATCTTTATGAGGTTT+GGG | - | chr8_1:36626831-36626850 | Msa1191820:intron | 35.0% | |
| !!! | TTAGCTTTTGAGACTGAGTT+AGG | - | chr8_1:36626872-36626891 | Msa1191820:CDS | 35.0% |
| TAAGCATAATCAACATACCC+AGG | + | chr8_1:36627190-36627209 | None:intergenic | 35.0% | |
| AAATGATGATACAGATACGG+CGG | - | chr8_1:36627266-36627285 | Msa1191820:intron | 35.0% | |
| AGCAAATACGAAACAGTATG+AGG | + | chr8_1:36627580-36627599 | None:intergenic | 35.0% | |
| CCCTTCTACTAATTTCATCT+TGG | - | chr8_1:36627604-36627623 | Msa1191820:intron | 35.0% | |
| !! | GTTCGTGAATTTAGTTCTTG+TGG | - | chr8_1:36627653-36627672 | Msa1191820:intron | 35.0% |
| ATCAAAAGATTGAGGTGAAC+TGG | + | chr8_1:36627836-36627855 | None:intergenic | 35.0% | |
| ACCGTTCTATATGTTGACAA+TGG | - | chr8_1:36627951-36627970 | Msa1191820:intron | 35.0% | |
| TGACAATGGTTTGAATGCTA+TGG | - | chr8_1:36627965-36627984 | Msa1191820:intron | 35.0% | |
| GACAATGGTTTGAATGCTAT+GGG | - | chr8_1:36627966-36627985 | Msa1191820:intron | 35.0% | |
| CAGTCCTATATTTAGTGATC+TGG | - | chr8_1:36628001-36628020 | Msa1191820:intron | 35.0% | |
| TAATGACTGACAATTGGTTG+AGG | - | chr8_1:36628325-36628344 | Msa1191820:five_prime_UTR | 35.0% | |
| !! | GGAAGTGTCGAACAAATGTT+TGG | + | chr8_1:36623215-36623234 | None:intergenic | 40.0% |
| TGAATGAATACAACCCCACT+TGG | - | chr8_1:36623794-36623813 | Msa1191820:intron | 40.0% | |
| CAAATGACGATATCCAAGTG+GGG | + | chr8_1:36623810-36623829 | None:intergenic | 40.0% | |
| GACAAATGACGATATCCAAG+TGG | + | chr8_1:36623812-36623831 | None:intergenic | 40.0% | |
| ! | TCGGCAAACTTTTGTGATGA+AGG | + | chr8_1:36624440-36624459 | None:intergenic | 40.0% |
| ! | ATGATGATGTAAAGCTCCGT+TGG | + | chr8_1:36624553-36624572 | None:intergenic | 40.0% |
| ATCTGCCAAAATTGCGACAA+AGG | - | chr8_1:36624580-36624599 | Msa1191820:intron | 40.0% | |
| ! | CATTGCCTTTGTCGCAATTT+TGG | + | chr8_1:36624588-36624607 | None:intergenic | 40.0% |
| AGCGAAACAAGTCCAATTTC+AGG | - | chr8_1:36624617-36624636 | Msa1191820:intron | 40.0% | |
| AGTCAAAGACACCGATATCA+AGG | + | chr8_1:36625019-36625038 | None:intergenic | 40.0% | |
| !! | GGTAAAAGAGCGTTTATTGC+TGG | - | chr8_1:36625079-36625098 | Msa1191820:intron | 40.0% |
| !! | GTGGCTGATGATAATGGATA+CGG | - | chr8_1:36625103-36625122 | Msa1191820:intron | 40.0% |
| !! | CTGATGATAATGGATACGGA+TGG | - | chr8_1:36625107-36625126 | Msa1191820:intron | 40.0% |
| CTGAAATTCTTCTTGGCACA+TGG | - | chr8_1:36625161-36625180 | Msa1191820:intron | 40.0% | |
| TAGCAAGGTGATACATTGCA+TGG | + | chr8_1:36625447-36625466 | None:intergenic | 40.0% | |
| TGAACCATCAGGTAATCTGA+AGG | + | chr8_1:36625491-36625510 | None:intergenic | 40.0% | |
| AGCATCCAAGGGATAAACTT+TGG | + | chr8_1:36625527-36625546 | None:intergenic | 40.0% | |
| AAAACAAACAAGCGCTATGC+TGG | - | chr8_1:36625692-36625711 | Msa1191820:intron | 40.0% | |
| GAATCCGTTAAGGAAGACTT+TGG | - | chr8_1:36626526-36626545 | Msa1191820:intron | 40.0% | |
| TACTCTATTTACGGTACCTC+TGG | + | chr8_1:36626589-36626608 | None:intergenic | 40.0% | |
| TTGCAGCAAGATATCCTTTC+CGG | + | chr8_1:36626703-36626722 | None:intergenic | 40.0% | |
| TACATGCCTGGGTTAATGAT+TGG | + | chr8_1:36626773-36626792 | None:intergenic | 40.0% | |
| GTCTCAAAAGCTAACTCAAG+AGG | + | chr8_1:36626866-36626885 | None:intergenic | 40.0% | |
| ! | GGCCATATCTCTAGAAAACA+TGG | + | chr8_1:36626985-36627004 | None:intergenic | 40.0% |
| TACCTGTCTGACGTATTTGT+AGG | - | chr8_1:36627118-36627137 | Msa1191820:exon | 40.0% | |
| AGAGTCAACACTATATCTGC+TGG | - | chr8_1:36627464-36627483 | Msa1191820:intron | 40.0% | |
| GTTACAAGGAACAATCCTGA+TGG | + | chr8_1:36627811-36627830 | None:intergenic | 40.0% | |
| TTCATATGTAACAGAGGAGG+TGG | - | chr8_1:36627878-36627897 | Msa1191820:intron | 40.0% | |
| TCATATGTAACAGAGGAGGT+GGG | - | chr8_1:36627879-36627898 | Msa1191820:intron | 40.0% | |
| AGACTACACTGTCTAAGTTG+GGG | + | chr8_1:36628063-36628082 | None:intergenic | 40.0% | |
| GAGACTACACTGTCTAAGTT+GGG | + | chr8_1:36628064-36628083 | None:intergenic | 40.0% | |
| AGCGAAGCAAATACTCTAAG+TGG | + | chr8_1:36628086-36628105 | None:intergenic | 40.0% | |
| TGGTCTAGATTGCATTACTG+TGG | - | chr8_1:36628218-36628237 | Msa1191820:five_prime_UTR | 40.0% | |
| GAAATTAATGCCTAGTAGGG+TGG | - | chr8_1:36628275-36628294 | Msa1191820:five_prime_UTR | 40.0% | |
| TGCATACGAGAGGAAAGCTT+TGG | + | chr8_1:36623236-36623255 | None:intergenic | 45.0% | |
| TGAGGATTTACCGGCAATGT+AGG | + | chr8_1:36623323-36623342 | None:intergenic | 45.0% | |
| CTAGCCCGTAATTAAGCTGT+TGG | - | chr8_1:36623831-36623850 | Msa1191820:intron | 45.0% | |
| GCTGCCATCTTCAATGTGTA+TGG | + | chr8_1:36624371-36624390 | None:intergenic | 45.0% | |
| AAGAACCACAGTGCTCACAT+CGG | + | chr8_1:36624459-36624478 | None:intergenic | 45.0% | |
| TTTATTCCACGATCCCACCT+TGG | + | chr8_1:36624492-36624511 | None:intergenic | 45.0% | |
| GATGTAAAGCTCCGTTGGAA+GGG | + | chr8_1:36624548-36624567 | None:intergenic | 45.0% | |
| TGATGTAAAGCTCCGTTGGA+AGG | + | chr8_1:36624549-36624568 | None:intergenic | 45.0% | |
| AAGTGTTCTAGCACCGCTAT+AGG | + | chr8_1:36624827-36624846 | None:intergenic | 45.0% | |
| TCCCACCTTCTCCTTGATAT+CGG | - | chr8_1:36625005-36625024 | Msa1191820:intron | 45.0% | |
| ACCGATATCAAGGAGAAGGT+GGG | + | chr8_1:36625009-36625028 | None:intergenic | 45.0% | |
| AGACACCGATATCAAGGAGA+AGG | + | chr8_1:36625013-36625032 | None:intergenic | 45.0% | |
| !! | AAGAGCGTTTATTGCTGGTG+TGG | - | chr8_1:36625084-36625103 | Msa1191820:intron | 45.0% |
| GCTGGAGCTGAAATTCTTCT+TGG | - | chr8_1:36625154-36625173 | Msa1191820:intron | 45.0% | |
| GGAATGCATACACAACAGGA+AGG | + | chr8_1:36625281-36625300 | None:intergenic | 45.0% | |
| GAGTGGAATGCATACACAAC+AGG | + | chr8_1:36625285-36625304 | None:intergenic | 45.0% | |
| AAATTTCCCACGTCGTAAGC+TGG | + | chr8_1:36625371-36625390 | None:intergenic | 45.0% | |
| !!! | TTTTGGGGCTCTTGTCTACA+TGG | + | chr8_1:36625963-36625982 | None:intergenic | 45.0% |
| !! | TCTGGGTGTTGAAGAATCCA+TGG | - | chr8_1:36626368-36626387 | Msa1191820:CDS | 45.0% |
| GGAAGTTGCTGAATCCGTTA+AGG | - | chr8_1:36626516-36626535 | Msa1191820:intron | 45.0% | |
| GCTGCCAAAGTCTTCCTTAA+CGG | + | chr8_1:36626533-36626552 | None:intergenic | 45.0% | |
| TGCAGCAAGATATCCTTTCC+GGG | + | chr8_1:36626702-36626721 | None:intergenic | 45.0% | |
| ACACATATCTGTCACACCCA+GGG | + | chr8_1:36626956-36626975 | None:intergenic | 45.0% | |
| AACCCCAAAAGCTAGCTCAA+GGG | + | chr8_1:36627042-36627061 | None:intergenic | 45.0% | |
| CACCTACAAATACGTCAGAC+AGG | + | chr8_1:36627123-36627142 | None:intergenic | 45.0% | |
| CTGTCTGACGTATTTGTAGG+TGG | - | chr8_1:36627121-36627140 | Msa1191820:exon | 45.0% | |
| TCACATACATCGCATCAGAG+AGG | - | chr8_1:36627158-36627177 | Msa1191820:intron | 45.0% | |
| CATCAGAGAGGATCATTCCT+GGG | - | chr8_1:36627170-36627189 | Msa1191820:intron | 45.0% | |
| TTTGCAGCACGACTTCTTAG+TGG | + | chr8_1:36627705-36627724 | None:intergenic | 45.0% | |
| AGTCGTGCTGCAAAAGCAAT+TGG | - | chr8_1:36627711-36627730 | Msa1191820:intron | 45.0% | |
| ! | CTCTTTCTGTAGAGGTGCAT+TGG | + | chr8_1:36627769-36627788 | None:intergenic | 45.0% |
| GCTGATAGCTCTTTCTGTAG+AGG | + | chr8_1:36627777-36627796 | None:intergenic | 45.0% | |
| CTACAGAAAGAGCTATCAGC+AGG | - | chr8_1:36627777-36627796 | Msa1191820:intron | 45.0% | |
| CAGCAGGTAACATTTCCATC+AGG | - | chr8_1:36627793-36627812 | Msa1191820:intron | 45.0% | |
| GAGGTGAACTGGTTGTTACA+AGG | + | chr8_1:36627825-36627844 | None:intergenic | 45.0% | |
| CTTGTCGTCACCTTTAGCAT+CGG | - | chr8_1:36627917-36627936 | Msa1191820:intron | 45.0% | |
| TAGTGATCTGGACATTCCCA+AGG | - | chr8_1:36628013-36628032 | Msa1191820:intron | 45.0% | |
| GGTACTTAATGCTGCTCCTT+GGG | + | chr8_1:36628032-36628051 | None:intergenic | 45.0% | |
| TGGTACTTAATGCTGCTCCT+TGG | + | chr8_1:36628033-36628052 | None:intergenic | 45.0% | |
| GGAGACTACACTGTCTAAGT+TGG | + | chr8_1:36628065-36628084 | None:intergenic | 45.0% | |
| TGCTATATGCTCAGAAGAGC+AGG | - | chr8_1:36628150-36628169 | Msa1191820:intron | 45.0% | |
| AAAGTCTCTACCACCCTACT+AGG | + | chr8_1:36628288-36628307 | None:intergenic | 45.0% | |
| !!! | ATATAATTTTTTTTTATTCT+TGG | - | chr8_1:36625739-36625758 | Msa1191820:intron | 5.0% |
| ! | GATGTGAGCACTGTGGTTCT+TGG | - | chr8_1:36624458-36624477 | Msa1191820:intron | 50.0% |
| CACCGATATCAAGGAGAAGG+TGG | + | chr8_1:36625010-36625029 | None:intergenic | 50.0% | |
| GCTGGTGTGGCTGATGATAA+TGG | - | chr8_1:36625097-36625116 | Msa1191820:intron | 50.0% | |
| GCAAAATCTCTTGCTGCAGC+TGG | - | chr8_1:36625136-36625155 | Msa1191820:intron | 50.0% | |
| TTTGAGTCCAGCTTACGACG+TGG | - | chr8_1:36625361-36625380 | Msa1191820:intron | 50.0% | |
| TTGAGTCCAGCTTACGACGT+GGG | - | chr8_1:36625362-36625381 | Msa1191820:intron | 50.0% | |
| GCTATGCTGGATCCAGCAAA+TGG | - | chr8_1:36625705-36625724 | Msa1191820:intron | 50.0% | |
| ATCCAGCAAATGGACAGTCC+AGG | - | chr8_1:36625715-36625734 | Msa1191820:intron | 50.0% | |
| TACCTGGACTGTCCATTTGC+TGG | + | chr8_1:36625720-36625739 | None:intergenic | 50.0% | |
| GTGACACCAGACTAGTACCT+TGG | + | chr8_1:36625912-36625931 | None:intergenic | 50.0% | |
| CATTGGCAAGAGAGTGGACA+AGG | + | chr8_1:36626564-36626583 | None:intergenic | 50.0% | |
| CTTGTCCACTCTCTTGCCAA+TGG | - | chr8_1:36626562-36626581 | Msa1191820:intron | 50.0% | |
| TTACGGTACCTCTGGTCCAT+TGG | + | chr8_1:36626581-36626600 | None:intergenic | 50.0% | |
| ATAGGTGACCAAACCACTGC+TGG | - | chr8_1:36626670-36626689 | Msa1191820:intron | 50.0% | |
| ATATCTGTCACACCCAGGGT+TGG | + | chr8_1:36626952-36626971 | None:intergenic | 50.0% | |
| GACACATATCTGTCACACCC+AGG | + | chr8_1:36626957-36626976 | None:intergenic | 50.0% | |
| !!! | TCACCCCTTGAGCTAGCTTT+TGG | - | chr8_1:36627035-36627054 | Msa1191820:CDS | 50.0% |
| !!! | CACCCCTTGAGCTAGCTTTT+GGG | - | chr8_1:36627036-36627055 | Msa1191820:CDS | 50.0% |
| !!! | ACCCCTTGAGCTAGCTTTTG+GGG | - | chr8_1:36627037-36627056 | Msa1191820:CDS | 50.0% |
| ACCCCAAAAGCTAGCTCAAG+GGG | + | chr8_1:36627041-36627060 | None:intergenic | 50.0% | |
| CAACCCCAAAAGCTAGCTCA+AGG | + | chr8_1:36627043-36627062 | None:intergenic | 50.0% | |
| GCATCAGAGAGGATCATTCC+TGG | - | chr8_1:36627169-36627188 | Msa1191820:intron | 50.0% | |
| TGATGATACAGATACGGCGG+TGG | - | chr8_1:36627269-36627288 | Msa1191820:intron | 50.0% | |
| TTGGCTTCTTCCCTGTCACT+GGG | - | chr8_1:36627370-36627389 | Msa1191820:intron | 50.0% | |
| !!! | CAGGTGCTTGCTTTTGAAGC+TGG | - | chr8_1:36627425-36627444 | Msa1191820:intron | 50.0% |
| AACTCGTGTCTCTTGCTTCC+AGG | - | chr8_1:36627678-36627697 | Msa1191820:intron | 50.0% | |
| CCTGTGATAGCCGATGCTAA+AGG | + | chr8_1:36627930-36627949 | None:intergenic | 50.0% | |
| !! | CCTTTAGCATCGGCTATCAC+AGG | - | chr8_1:36627927-36627946 | Msa1191820:intron | 50.0% |
| GGTTTGAATGCTATGGGCGT+TGG | - | chr8_1:36627972-36627991 | Msa1191820:intron | 50.0% | |
| ! | GTCTAAGTTGGGGTGAGACT+TGG | + | chr8_1:36628053-36628072 | None:intergenic | 50.0% |
| AGTTCACTTGCGCGTGAGAC+GGG | + | chr8_1:36623175-36623194 | None:intergenic | 55.0% | |
| CAGTTCACTTGCGCGTGAGA+CGG | + | chr8_1:36623176-36623195 | None:intergenic | 55.0% | |
| ! | GTTTGCCGATGTGAGCACTG+TGG | - | chr8_1:36624451-36624470 | Msa1191820:intron | 55.0% |
| !! | GGTTCTTGGTGCCAAGTCCA+AGG | - | chr8_1:36624472-36624491 | Msa1191820:intron | 55.0% |
| !! | TCTTGGTGCCAAGTCCAAGG+TGG | - | chr8_1:36624475-36624494 | Msa1191820:intron | 55.0% |
| !! | CTTGGTGCCAAGTCCAAGGT+GGG | - | chr8_1:36624476-36624495 | Msa1191820:intron | 55.0% |
| CATCAGTGCAGCCCTTCCAA+CGG | - | chr8_1:36624534-36624553 | Msa1191820:intron | 55.0% | |
| CTGGTCCATTGGCAAGAGAG+TGG | + | chr8_1:36626570-36626589 | None:intergenic | 55.0% | |
| CTCTCTTGCCAATGGACCAG+AGG | - | chr8_1:36626570-36626589 | Msa1191820:intron | 55.0% | |
| GGATGTCTCCAGCAGTGGTT+TGG | + | chr8_1:36626681-36626700 | None:intergenic | 55.0% | |
| AACCACTGCTGGAGACATCC+CGG | - | chr8_1:36626681-36626700 | Msa1191820:intron | 55.0% | |
| ACACCCTACATGTCCAACCC+TGG | - | chr8_1:36626936-36626955 | Msa1191820:CDS | 55.0% | |
| CACCCTACATGTCCAACCCT+GGG | - | chr8_1:36626937-36626956 | Msa1191820:CDS | 55.0% | |
| CACCCAGGGTTGGACATGTA+GGG | + | chr8_1:36626942-36626961 | None:intergenic | 55.0% | |
| ACACCCAGGGTTGGACATGT+AGG | + | chr8_1:36626943-36626962 | None:intergenic | 55.0% | |
| CAAGGGGTGACGATTGCTCA+AGG | + | chr8_1:36627025-36627044 | None:intergenic | 55.0% | |
| ! | GTTGGCTTCTTCCCTGTCAC+TGG | - | chr8_1:36627369-36627388 | Msa1191820:intron | 55.0% |
| ! | GCACGACTTCTTAGTGGACC+TGG | + | chr8_1:36627699-36627718 | None:intergenic | 55.0% |
| GACGGGCAATGTAACACGCG+CGG | + | chr8_1:36623158-36623177 | None:intergenic | 60.0% | |
| CTGCTGCTGCTGCATACGAG+AGG | + | chr8_1:36623246-36623265 | None:intergenic | 60.0% | |
| CCACGATCCCACCTTGGACT+TGG | + | chr8_1:36624486-36624505 | None:intergenic | 60.0% | |
| CCAAGTCCAAGGTGGGATCG+TGG | - | chr8_1:36624483-36624502 | Msa1191820:intron | 60.0% | |
| ! | GGGGGACCAAGGTACTAGTC+TGG | - | chr8_1:36625903-36625922 | Msa1191820:intron | 60.0% |
| TTCCGGGATGTCTCCAGCAG+TGG | + | chr8_1:36626686-36626705 | None:intergenic | 60.0% | |
| CTGCTGGAGACATCCCGGAA+AGG | - | chr8_1:36626686-36626705 | Msa1191820:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36623141 | 36628368 | 36623141 | ID=Msa1191820;Name=Msa1191820 |
| chr8_1 | mRNA | 36623141 | 36628368 | 36623141 | ID=Msa1191820-mRNA-1;Parent=Msa1191820;Name=Msa1191820-mRNA-1;_AED=0.13;_eAED=0.13;_QI=222|1|1|1|0.91|0.84|13|322|392 |
| chr8_1 | exon | 36623141 | 36623617 | 36623141 | ID=Msa1191820-mRNA-1:exon:12083;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36623711 | 36623809 | 36623711 | ID=Msa1191820-mRNA-1:exon:12082;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36624024 | 36624081 | 36624024 | ID=Msa1191820-mRNA-1:exon:12081;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36624178 | 36624229 | 36624178 | ID=Msa1191820-mRNA-1:exon:12080;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36624318 | 36624369 | 36624318 | ID=Msa1191820-mRNA-1:exon:12079;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36624724 | 36624835 | 36624724 | ID=Msa1191820-mRNA-1:exon:12078;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36624918 | 36624992 | 36624918 | ID=Msa1191820-mRNA-1:exon:12077;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36625773 | 36625820 | 36625773 | ID=Msa1191820-mRNA-1:exon:12076;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36625930 | 36626014 | 36625930 | ID=Msa1191820-mRNA-1:exon:12075;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36626105 | 36626160 | 36626105 | ID=Msa1191820-mRNA-1:exon:12074;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36626320 | 36626429 | 36626320 | ID=Msa1191820-mRNA-1:exon:12073;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36626850 | 36627157 | 36626850 | ID=Msa1191820-mRNA-1:exon:12072;Parent=Msa1191820-mRNA-1 |
| chr8_1 | exon | 36628178 | 36628368 | 36628178 | ID=Msa1191820-mRNA-1:exon:12071;Parent=Msa1191820-mRNA-1 |
| chr8_1 | five_prime_UTR | 36628178 | 36628368 | 36628178 | ID=Msa1191820-mRNA-1:five_prime_utr;Parent=Msa1191820-mRNA-1 |
| chr8_1 | five_prime_UTR | 36627127 | 36627157 | 36627127 | ID=Msa1191820-mRNA-1:five_prime_utr;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36626850 | 36627126 | 36626850 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36626320 | 36626429 | 36626320 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36626105 | 36626160 | 36626105 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36625930 | 36626014 | 36625930 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36625773 | 36625820 | 36625773 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36624918 | 36624992 | 36624918 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36624724 | 36624835 | 36624724 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36624318 | 36624369 | 36624318 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36624178 | 36624229 | 36624178 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36624024 | 36624081 | 36624024 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36623711 | 36623809 | 36623711 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | CDS | 36623463 | 36623617 | 36623463 | ID=Msa1191820-mRNA-1:cds;Parent=Msa1191820-mRNA-1 |
| chr8_1 | three_prime_UTR | 36623141 | 36623462 | 36623141 | ID=Msa1191820-mRNA-1:three_prime_utr;Parent=Msa1191820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
