Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191930 | sp|B7FNA9|DRE2_MEDTR | 89.015 | 264 | 3 | 1 | 1 | 238 | 2 | 265 | 1.77e-164 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191930 | A0A072UMF3 | 89.015 | 264 | 3 | 1 | 1 | 238 | 17 | 280 | 5.34e-162 | 458 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610550 | Msa1191930 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa0748480 | Msa1191930 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa0377820 | Msa1191930 | 0.809365 | 1.961835e-50 | -8.615850e-47 |
| Msa0472930 | Msa1191930 | 0.813530 | 2.443285e-51 | -8.615850e-47 |
| Msa0256140 | Msa1191930 | 0.835733 | 1.413180e-56 | -8.615850e-47 |
| Msa0319640 | Msa1191930 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
| Msa0336450 | Msa1191930 | 0.814398 | 1.572629e-51 | -8.615850e-47 |
| Msa0336540 | Msa1191930 | 0.832146 | 1.116544e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191930 | MtrunA17_Chr4g0037921 | 89.015 | 264 | 3 | 1 | 1 | 238 | 2 | 265 | 1.30e-165 | 457 |
| Msa1191930 | MtrunA17_Chr4g0060301 | 86.667 | 255 | 8 | 1 | 1 | 229 | 2 | 256 | 1.58e-154 | 430 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191930 | AT5G18400.3 | 51.449 | 276 | 91 | 5 | 1 | 238 | 2 | 272 | 7.08e-73 | 223 |
| Msa1191930 | AT5G18400.2 | 51.449 | 276 | 91 | 5 | 1 | 238 | 2 | 272 | 7.08e-73 | 223 |
| Msa1191930 | AT5G18400.1 | 52.416 | 269 | 85 | 5 | 8 | 238 | 6 | 269 | 8.74e-73 | 223 |
Find 68 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGAAAACAAGTTATTAT+TGG | 0.250596 | 8_1:+36851305 | Msa1191930:CDS |
| TTTGGTCTACAGTGTGGGTT+AGG | 0.251749 | 8_1:+36853551 | Msa1191930:intron |
| GGGACTGCCTGCCTTCAAAA+TGG | 0.255879 | 8_1:+36853607 | Msa1191930:CDS |
| GTTATGTTATCGTTCGTTTA+AGG | 0.256165 | 8_1:+36853841 | Msa1191930:three_prime_UTR |
| TCCCAATCTGCTGTGGGTTC+AGG | 0.274662 | 8_1:+36851186 | Msa1191930:CDS |
| TCTTTACCAGATGGCAGTTC+AGG | 0.330853 | 8_1:-36851979 | None:intergenic |
| GAGGAGAAAGTGTTGAAGTT+AGG | 0.335111 | 8_1:+36852143 | Msa1191930:CDS |
| TGGCTGAATTTAAGATTTGT+AGG | 0.344827 | 8_1:-36854029 | None:intergenic |
| GACAACTAGTATATAATAAC+TGG | 0.358536 | 8_1:-36853913 | None:intergenic |
| AGATAGTAAGGGATTGTTAT+CGG | 0.361000 | 8_1:+36853819 | Msa1191930:three_prime_UTR |
| ACCTGAACCCACAGCAGATT+GGG | 0.367811 | 8_1:-36851187 | None:intergenic |
| AATAGAATTTATAGATAGTA+AGG | 0.371623 | 8_1:+36853807 | Msa1191930:three_prime_UTR |
| GTGGGTTAGGGGATGCGTTT+AGG | 0.373430 | 8_1:+36853564 | Msa1191930:CDS |
| CAATTACATGATTTATAGCT+TGG | 0.378337 | 8_1:-36854049 | None:intergenic |
| TCATAATCAATTTGCACCTT+GGG | 0.407602 | 8_1:-36851904 | None:intergenic |
| TTGGTCTACAGTGTGGGTTA+GGG | 0.418067 | 8_1:+36853552 | Msa1191930:intron |
| GCAACAGGGGATTGTGAAAT+CGG | 0.423300 | 8_1:+36852071 | Msa1191930:intron |
| AAGGCAGGCAGTCCCTTGTA+AGG | 0.430422 | 8_1:-36853599 | None:intergenic |
| GAAAACAAGTTATTATTGGC+AGG | 0.432138 | 8_1:+36851309 | Msa1191930:CDS |
| TGCTGTGGGTTCAGGTGATA+AGG | 0.434752 | 8_1:+36851194 | Msa1191930:CDS |
| GTCTGCAGCAAGGAAGTTAC+CGG | 0.440596 | 8_1:-36853742 | None:intergenic |
| GTGCAGTACCTGCCCTTACA+AGG | 0.441245 | 8_1:+36853586 | Msa1191930:CDS |
| GGTTGAGAAATTGGATCCTC+TGG | 0.453715 | 8_1:+36850170 | Msa1191930:CDS |
| ATCATAATCAATTTGCACCT+TGG | 0.455552 | 8_1:-36851905 | None:intergenic |
| TTAAGGTGTTTGATTTGATA+CGG | 0.458662 | 8_1:+36853858 | Msa1191930:three_prime_UTR |
| CACCTGAACCCACAGCAGAT+TGG | 0.467479 | 8_1:-36851188 | None:intergenic |
| TTTGATGCGATTAGAGAGCT+TGG | 0.471851 | 8_1:+36850138 | Msa1191930:CDS |
| GGACTGCCTGCCTTCAAAAT+GGG | 0.476612 | 8_1:+36853608 | Msa1191930:CDS |
| AAGAAACCTGAACTGCCATC+TGG | 0.477418 | 8_1:+36851973 | Msa1191930:CDS |
| CGAATAAGAGTTGTCCCACC+AGG | 0.491082 | 8_1:-36851156 | None:intergenic |
| ATTATGAAGTAGCTAAAGAG+AGG | 0.492726 | 8_1:-36853945 | None:intergenic |
| TGGTCTACAGTGTGGGTTAG+GGG | 0.497622 | 8_1:+36853553 | Msa1191930:intron |
| CAAATCCTCCCAATCTGCTG+TGG | 0.503823 | 8_1:+36851179 | Msa1191930:CDS |
| GCATCAAACACTTGACTGAC+AGG | 0.506089 | 8_1:-36850123 | None:intergenic |
| TTGATGCGATTAGAGAGCTT+GGG | 0.506545 | 8_1:+36850139 | Msa1191930:CDS |
| TGGTGCTGTGTTGGCATGTA+CGG | 0.526353 | 8_1:+36850086 | Msa1191930:CDS |
| TCTTGAGTCAGTTGGTCGAT+AGG | 0.526999 | 8_1:-36851114 | None:intergenic |
| ATTAGAGAGCTTGGGAATGA+GGG | 0.528876 | 8_1:+36850147 | Msa1191930:CDS |
| GATTAGAGAGCTTGGGAATG+AGG | 0.531987 | 8_1:+36850146 | Msa1191930:CDS |
| ATGTGGAAGGGCAGAAGAAG+AGG | 0.536094 | 8_1:+36852124 | Msa1191930:CDS |
| CAGGATGCTGCAAAGATGTA+TGG | 0.549895 | 8_1:+36850066 | None:intergenic |
| TAATGTTGTAACCTTTGTCG+TGG | 0.556107 | 8_1:+36853775 | Msa1191930:three_prime_UTR |
| AGGCAGTCCCTTGTAAGGGC+AGG | 0.558512 | 8_1:-36853594 | None:intergenic |
| TGTAACCTTTGTCGTGGGAA+TGG | 0.562127 | 8_1:+36853781 | Msa1191930:three_prime_UTR |
| ATACAGTTACATTAGTGCAC+TGG | 0.563179 | 8_1:-36854135 | None:intergenic |
| TGCCTTCAAAATGGGCGAGA+AGG | 0.566839 | 8_1:+36853616 | Msa1191930:CDS |
| AAATCCTCCCAATCTGCTGT+GGG | 0.570159 | 8_1:+36851180 | Msa1191930:CDS |
| GTCCTCAGTGTGTTAAAACC+TGG | 0.572273 | 8_1:+36851138 | Msa1191930:CDS |
| TGAGGACTTCTTGAGTCAGT+TGG | 0.573047 | 8_1:-36851122 | None:intergenic |
| ACACTGCCACAAGCTGATTG+AGG | 0.579233 | 8_1:-36852191 | None:intergenic |
| TGAAATCGGACCTACAAGAA+AGG | 0.582586 | 8_1:+36852085 | Msa1191930:CDS |
| ATAGAATTTATAGATAGTAA+GGG | 0.593569 | 8_1:+36853808 | Msa1191930:three_prime_UTR |
| AATAATCCTCAATCAGCTTG+TGG | 0.606583 | 8_1:+36852185 | Msa1191930:CDS |
| AATGTTGTAACCTTTGTCGT+GGG | 0.607211 | 8_1:+36853776 | Msa1191930:three_prime_UTR |
| CTCAGTGTGTTAAAACCTGG+TGG | 0.609178 | 8_1:+36851141 | Msa1191930:CDS |
| AAAGATGTATGGTGCTGTGT+TGG | 0.610093 | 8_1:+36850077 | Msa1191930:CDS |
| GTATATAATAACTGGAAACT+CGG | 0.615069 | 8_1:-36853905 | None:intergenic |
| TGAACCCACAGCAGATTGGG+AGG | 0.622299 | 8_1:-36851184 | None:intergenic |
| TTATGCCATTCCCACGACAA+AGG | 0.623950 | 8_1:-36853786 | None:intergenic |
| TGCAGTACCTGCCCTTACAA+GGG | 0.630912 | 8_1:+36853587 | Msa1191930:CDS |
| GGTTGTGAAAAGTTCACCCA+AGG | 0.638698 | 8_1:+36851888 | Msa1191930:CDS |
| TTAGAGAGCTTGGGAATGAG+GGG | 0.642564 | 8_1:+36850148 | Msa1191930:CDS |
| AGGCAGGCAGTCCCTTGTAA+GGG | 0.644070 | 8_1:-36853598 | None:intergenic |
| TCTATCATATGTCTGCAGCA+AGG | 0.648889 | 8_1:-36853752 | None:intergenic |
| TAGAGAGCTTGGGAATGAGG+GGG | 0.658577 | 8_1:+36850149 | Msa1191930:CDS |
| ACAGGCGTTACAATCTTCTG+TGG | 0.663312 | 8_1:+36851344 | Msa1191930:CDS |
| TCAGTGTGTTAAAACCTGGT+GGG | 0.663625 | 8_1:+36851142 | Msa1191930:CDS |
| GCTTACGATGCAGAAAACAA+AGG | 0.677893 | 8_1:-36853980 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTAAGAAAAAACAA+CGG | - | chr8_1:36851414-36851433 | None:intergenic | 10.0% |
| !!! | TCAAATTATTTTTTCTATAA+TGG | + | chr8_1:36853507-36853526 | Msa1191930:intron | 10.0% |
| !! | TGAATATTATTAAACAAAAA+AGG | + | chr8_1:36854075-36854094 | Msa1191930:three_prime_UTR | 10.0% |
| !! | GAATATTATTAAACAAAAAA+GGG | + | chr8_1:36854076-36854095 | Msa1191930:three_prime_UTR | 10.0% |
| !!! | TTTGCATTAAATTTGTTTTA+TGG | + | chr8_1:36850275-36850294 | Msa1191930:intron | 15.0% |
| !!! | TTGCATTAAATTTGTTTTAT+GGG | + | chr8_1:36850276-36850295 | Msa1191930:intron | 15.0% |
| !!! | TAAAACAAAGTTGATTTATT+TGG | + | chr8_1:36850950-36850969 | Msa1191930:intron | 15.0% |
| !!! | TTACATGATTAATACTTTTA+AGG | - | chr8_1:36852345-36852364 | None:intergenic | 15.0% |
| !! | AAAAAAACATTATAACATCA+AGG | - | chr8_1:36852547-36852566 | None:intergenic | 15.0% |
| !!! | TTGATGTTATAATGTTTTTT+TGG | + | chr8_1:36852546-36852565 | Msa1191930:intron | 15.0% |
| !! | AAAATAGACAAAACTATTAA+CGG | - | chr8_1:36853461-36853480 | None:intergenic | 15.0% |
| !!! | ATAATTTGAAATAGCATTAA+CGG | - | chr8_1:36853496-36853515 | None:intergenic | 15.0% |
| !! | CTGCAAAAAAAAAAAAAATA+TGG | - | chr8_1:36853712-36853731 | None:intergenic | 15.0% |
| !!! | CATATTTTTTTTTTTTTTGC+AGG | + | chr8_1:36853710-36853729 | Msa1191930:intron | 15.0% |
| !! | AATAGAATTTATAGATAGTA+AGG | + | chr8_1:36853807-36853826 | Msa1191930:three_prime_UTR | 15.0% |
| !! | ATAGAATTTATAGATAGTAA+GGG | + | chr8_1:36853808-36853827 | Msa1191930:three_prime_UTR | 15.0% |
| !! | ATAATATGCACAATAATTGA+AGG | - | chr8_1:36850234-36850253 | None:intergenic | 20.0% |
| !! | TATTATGTGATGTGATATAA+TGG | + | chr8_1:36850251-36850270 | Msa1191930:intron | 20.0% |
| !!! | TGCATTAAATTTGTTTTATG+GGG | + | chr8_1:36850277-36850296 | Msa1191930:intron | 20.0% |
| !!! | TTCTATTTTCTCAGTATTAT+TGG | - | chr8_1:36850647-36850666 | None:intergenic | 20.0% |
| !!! | TTTTAATGTTTGAAGTTTGT+GGG | + | chr8_1:36850781-36850800 | Msa1191930:intron | 20.0% |
| !! | AAAAAATAGTCGGTAAAAAT+TGG | - | chr8_1:36851018-36851037 | None:intergenic | 20.0% |
| !! | TCTTGAAAACAAGTTATTAT+TGG | + | chr8_1:36851305-36851324 | Msa1191930:CDS | 20.0% |
| !! | GTTAATAAGGAAAAAAAATC+TGG | - | chr8_1:36851762-36851781 | None:intergenic | 20.0% |
| !! | TATAATTAGAACTTGTAAGA+TGG | - | chr8_1:36851795-36851814 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTAATCAATCTGT+TGG | + | chr8_1:36852227-36852246 | Msa1191930:intron | 20.0% |
| !!! | ATGGTAACATATTTAAGATT+TGG | - | chr8_1:36852485-36852504 | None:intergenic | 20.0% |
| !! | AAATCTTAAATATGTTACCA+TGG | + | chr8_1:36852484-36852503 | Msa1191930:intron | 20.0% |
| !!! | ATATACTTTTGATTTACATG+TGG | + | chr8_1:36853229-36853248 | Msa1191930:intron | 20.0% |
| !!! | CAGAGTTTGTAATTTTAAAT+AGG | + | chr8_1:36853260-36853279 | Msa1191930:intron | 20.0% |
| ! | ATAATGAAACCCTAAAAGAT+GGG | - | chr8_1:36850396-36850415 | None:intergenic | 25.0% |
| ! | AATAATGAAACCCTAAAAGA+TGG | - | chr8_1:36850397-36850416 | None:intergenic | 25.0% |
| !! | AATTCACTCTATGCATTTTT+CGG | - | chr8_1:36850445-36850464 | None:intergenic | 25.0% |
| !!! | GTTTTAATGTTTGAAGTTTG+TGG | + | chr8_1:36850780-36850799 | Msa1191930:intron | 25.0% |
| !! | TTTAATGTTTGAAGTTTGTG+GGG | + | chr8_1:36850782-36850801 | Msa1191930:intron | 25.0% |
| ! | TGAAGTTTGCAAAAAATAGT+CGG | - | chr8_1:36851028-36851047 | None:intergenic | 25.0% |
| !!! | AATAACTTGTTTTCAAGATC+AGG | - | chr8_1:36851303-36851322 | None:intergenic | 25.0% |
| ! | AAAACAACGGTTAATAAAGA+TGG | - | chr8_1:36851401-36851420 | None:intergenic | 25.0% |
| ! | ATAAGGAAAAAAAATCTGGA+TGG | - | chr8_1:36851758-36851777 | None:intergenic | 25.0% |
| ! | TAAAAATTGGATGACACTAT+AGG | - | chr8_1:36852255-36852274 | None:intergenic | 25.0% |
| !! | TATTTTCTGCGTTAAAATTG+TGG | + | chr8_1:36852313-36852332 | Msa1191930:intron | 25.0% |
| ! | AACCAGTTCAATTAATAGTA+TGG | + | chr8_1:36852633-36852652 | Msa1191930:intron | 25.0% |
| ! | AACCATACTATTAATTGAAC+TGG | - | chr8_1:36852638-36852657 | None:intergenic | 25.0% |
| ! | TATTTGCAAAGAAAGTAGTT+TGG | - | chr8_1:36852749-36852768 | None:intergenic | 25.0% |
| !!! | TTAAGGTGTTTGATTTGATA+CGG | + | chr8_1:36853858-36853877 | Msa1191930:three_prime_UTR | 25.0% |
| ! | GTATATAATAACTGGAAACT+CGG | - | chr8_1:36853908-36853927 | None:intergenic | 25.0% |
| ! | GACAACTAGTATATAATAAC+TGG | - | chr8_1:36853916-36853935 | None:intergenic | 25.0% |
| ! | CAATTACATGATTTATAGCT+TGG | - | chr8_1:36854052-36854071 | None:intergenic | 25.0% |
| AGTGAATTAGTGTATCCTTT+CGG | + | chr8_1:36850457-36850476 | Msa1191930:intron | 30.0% | |
| ATTTCATCCAACATGAATCA+AGG | - | chr8_1:36850533-36850552 | None:intergenic | 30.0% | |
| TGCTGTTATATAGATGCTAA+TGG | + | chr8_1:36850744-36850763 | Msa1191930:intron | 30.0% | |
| ! | TTAATGTTTGAAGTTTGTGG+GGG | + | chr8_1:36850783-36850802 | Msa1191930:intron | 30.0% |
| ! | GAACTAGATGCATTTTATCT+TGG | + | chr8_1:36850983-36851002 | Msa1191930:intron | 30.0% |
| TCGGTAAAAATTGGAATCTT+TGG | - | chr8_1:36851009-36851028 | None:intergenic | 30.0% | |
| !!! | GACTATTTTTTGCAAACTTC+AGG | + | chr8_1:36851027-36851046 | Msa1191930:intron | 30.0% |
| !!! | TGGATTTGGTTGTTTTAATC+TGG | + | chr8_1:36851076-36851095 | Msa1191930:intron | 30.0% |
| GAAAACAAGTTATTATTGGC+AGG | + | chr8_1:36851309-36851328 | Msa1191930:CDS | 30.0% | |
| AACGGTTAATAAAGATGGTA+AGG | - | chr8_1:36851396-36851415 | None:intergenic | 30.0% | |
| AAAACCATTAACTACAGCAA+TGG | - | chr8_1:36851621-36851640 | None:intergenic | 30.0% | |
| !! | ATGGTTTTTCATTTTTGTGC+AGG | + | chr8_1:36851633-36851652 | Msa1191930:intron | 30.0% |
| AAAAAGCCTTCATGGAAAAT+TGG | + | chr8_1:36851844-36851863 | Msa1191930:CDS | 30.0% | |
| ! | TTCATCTTTTGCACTAAAGA+AGG | + | chr8_1:36851867-36851886 | Msa1191930:CDS | 30.0% |
| TCATAATCAATTTGCACCTT+GGG | - | chr8_1:36851907-36851926 | None:intergenic | 30.0% | |
| ATCATAATCAATTTGCACCT+TGG | - | chr8_1:36851908-36851927 | None:intergenic | 30.0% | |
| ! | CGGCTATTTGAACATATTTT+CGG | - | chr8_1:36852373-36852392 | None:intergenic | 30.0% |
| ATGTTGTCAATTCCAAATAG+CGG | - | chr8_1:36852435-36852454 | None:intergenic | 30.0% | |
| ACATAGATGTCAAGACTATT+TGG | + | chr8_1:36852451-36852470 | Msa1191930:intron | 30.0% | |
| !! | TGATAGGTAATTTTGGCAAT+TGG | - | chr8_1:36852716-36852735 | None:intergenic | 30.0% |
| ! | TGGAGTTTGATAGGTAATTT+TGG | - | chr8_1:36852723-36852742 | None:intergenic | 30.0% |
| TGTTCCTTTGTCAAAATTCA+AGG | + | chr8_1:36852810-36852829 | Msa1191930:intron | 30.0% | |
| CAATACTTCATCAGTTGATT+CGG | + | chr8_1:36852970-36852989 | Msa1191930:intron | 30.0% | |
| !! | AAGCTTTATTAGTCATTCTG+TGG | - | chr8_1:36853172-36853191 | None:intergenic | 30.0% |
| ! | TTTGATTTACATGTGGATTC+TGG | + | chr8_1:36853236-36853255 | Msa1191930:intron | 30.0% |
| TTGATTTACATGTGGATTCT+GGG | + | chr8_1:36853237-36853256 | Msa1191930:intron | 30.0% | |
| CAGAGTTTAAATTAAGCTTC+TGG | + | chr8_1:36853283-36853302 | Msa1191930:intron | 30.0% | |
| AATGCTAGATACAATTCAGT+GGG | - | chr8_1:36853319-36853338 | None:intergenic | 30.0% | |
| AAATGCTAGATACAATTCAG+TGG | - | chr8_1:36853320-36853339 | None:intergenic | 30.0% | |
| AAGACAAACTTTCAGAACAA+TGG | - | chr8_1:36853533-36853552 | None:intergenic | 30.0% | |
| !! | TTGTTCTGAAAGTTTGTCTT+TGG | + | chr8_1:36853533-36853552 | Msa1191930:intron | 30.0% |
| !! | GTTGTTTGGTGTCATTTATT+TGG | + | chr8_1:36853664-36853683 | Msa1191930:intron | 30.0% |
| ATATGGATAAGTTATGCAAC+AGG | - | chr8_1:36853695-36853714 | None:intergenic | 30.0% | |
| AGATAGTAAGGGATTGTTAT+CGG | + | chr8_1:36853819-36853838 | Msa1191930:three_prime_UTR | 30.0% | |
| GTTATGTTATCGTTCGTTTA+AGG | + | chr8_1:36853841-36853860 | Msa1191930:three_prime_UTR | 30.0% | |
| ATTATGAAGTAGCTAAAGAG+AGG | - | chr8_1:36853948-36853967 | None:intergenic | 30.0% | |
| ! | TGGCTGAATTTAAGATTTGT+AGG | - | chr8_1:36854032-36854051 | None:intergenic | 30.0% |
| TTAAACAAAAAAGGGCAATC+AGG | + | chr8_1:36854084-36854103 | Msa1191930:three_prime_UTR | 30.0% | |
| ATGCACAATAATTGAAGGAG+AGG | - | chr8_1:36850229-36850248 | None:intergenic | 35.0% | |
| ! | GCAATAGAAACACGTAGTTT+TGG | - | chr8_1:36850324-36850343 | None:intergenic | 35.0% |
| TTACCCAACATCATGATTCA+TGG | + | chr8_1:36850366-36850385 | Msa1191930:intron | 35.0% | |
| ATGCCATGAATCATGATGTT+GGG | - | chr8_1:36850372-36850391 | None:intergenic | 35.0% | |
| TATGCCATGAATCATGATGT+TGG | - | chr8_1:36850373-36850392 | None:intergenic | 35.0% | |
| CCAACATGAATCAAGGAAAA+AGG | - | chr8_1:36850526-36850545 | None:intergenic | 35.0% | |
| ! | CCTTTTTCCTTGATTCATGT+TGG | + | chr8_1:36850523-36850542 | Msa1191930:intron | 35.0% |
| TTAACCTGGAAACTTAGACA+TGG | + | chr8_1:36850586-36850605 | Msa1191930:intron | 35.0% | |
| ! | ACACCTTCAATTTGAAGTGT+AGG | + | chr8_1:36850715-36850734 | Msa1191930:intron | 35.0% |
| ATATAGATGCTAATGGCTTG+TGG | + | chr8_1:36850751-36850770 | Msa1191930:intron | 35.0% | |
| !! | AAAACATGTGTCGATTGACA+GGG | + | chr8_1:36850822-36850841 | Msa1191930:intron | 35.0% |
| GGAAAATGGGAAATCGTATT+TGG | - | chr8_1:36850885-36850904 | None:intergenic | 35.0% | |
| TAAAACAACCAAATCCACAG+AGG | - | chr8_1:36851073-36851092 | None:intergenic | 35.0% | |
| TATCATCTGAAAGGACAATG+GGG | - | chr8_1:36851280-36851299 | None:intergenic | 35.0% | |
| GTATCATCTGAAAGGACAAT+GGG | - | chr8_1:36851281-36851300 | None:intergenic | 35.0% | |
| AAGATCAGGTATCATCTGAA+AGG | - | chr8_1:36851289-36851308 | None:intergenic | 35.0% | |
| CTGTGGTAAGTTTCATTATC+TGG | + | chr8_1:36851361-36851380 | Msa1191930:intron | 35.0% | |
| ATTGTGCAATAGAATACGCT+AGG | + | chr8_1:36851455-36851474 | Msa1191930:intron | 35.0% | |
| ! | TTTTCCTATTGCATGTCTAG+TGG | + | chr8_1:36851717-36851736 | Msa1191930:intron | 35.0% |
| AAAAAAATCTGGATGGCTCA+TGG | - | chr8_1:36851751-36851770 | None:intergenic | 35.0% | |
| TCAAAGCTAAAAAGCCTTCA+TGG | + | chr8_1:36851836-36851855 | Msa1191930:CDS | 35.0% | |
| ! | GATGAACCAATTTTCCATGA+AGG | - | chr8_1:36851853-36851872 | None:intergenic | 35.0% |
| TTAGGCTTACGTGTGATATT+TGG | + | chr8_1:36852031-36852050 | Msa1191930:intron | 35.0% | |
| CAAAAATTGCTCATGTGGAA+GGG | + | chr8_1:36852112-36852131 | Msa1191930:CDS | 35.0% | |
| AATAATCCTCAATCAGCTTG+TGG | + | chr8_1:36852185-36852204 | Msa1191930:CDS | 35.0% | |
| GTGGACATGAATCATATCAT+TGG | - | chr8_1:36852672-36852691 | None:intergenic | 35.0% | |
| !! | AATTTTGGCAATTGGAGTGT+GGG | - | chr8_1:36852708-36852727 | None:intergenic | 35.0% |
| !! | TAATTTTGGCAATTGGAGTG+TGG | - | chr8_1:36852709-36852728 | None:intergenic | 35.0% |
| TTGCAAAGAAAGTAGTTTGG+TGG | - | chr8_1:36852746-36852765 | None:intergenic | 35.0% | |
| ACAATCAATGAAAGTTCTGC+AGG | - | chr8_1:36852793-36852812 | None:intergenic | 35.0% | |
| !! | ACGTCCTTGAATTTTGACAA+AGG | - | chr8_1:36852817-36852836 | None:intergenic | 35.0% |
| TAAATTGACAGAAGCAAGGA+TGG | - | chr8_1:36852866-36852885 | None:intergenic | 35.0% | |
| CAACTAAATTGACAGAAGCA+AGG | - | chr8_1:36852870-36852889 | None:intergenic | 35.0% | |
| CTTGCTTCTGTCAATTTAGT+TGG | + | chr8_1:36852868-36852887 | Msa1191930:intron | 35.0% | |
| CAAAAATTCCACTGAGTCAA+CGG | - | chr8_1:36853012-36853031 | None:intergenic | 35.0% | |
| TCGGAAACAACTACAACAAA+AGG | - | chr8_1:36853047-36853066 | None:intergenic | 35.0% | |
| TTGCTAGGCAACTTAATCAT+TGG | - | chr8_1:36853105-36853124 | None:intergenic | 35.0% | |
| ATGCTAGATACAATTCAGTG+GGG | - | chr8_1:36853318-36853337 | None:intergenic | 35.0% | |
| ACACCAAACAACTTAAGAGA+GGG | - | chr8_1:36853656-36853675 | None:intergenic | 35.0% | |
| TAATGTTGTAACCTTTGTCG+TGG | + | chr8_1:36853775-36853794 | Msa1191930:three_prime_UTR | 35.0% | |
| AATGTTGTAACCTTTGTCGT+GGG | + | chr8_1:36853776-36853795 | Msa1191930:three_prime_UTR | 35.0% | |
| ATACAGTTACATTAGTGCAC+TGG | - | chr8_1:36854138-36854157 | None:intergenic | 35.0% | |
| !! | AAAGATGTATGGTGCTGTGT+TGG | + | chr8_1:36850077-36850096 | Msa1191930:CDS | 40.0% |
| TTTGATGCGATTAGAGAGCT+TGG | + | chr8_1:36850138-36850157 | Msa1191930:CDS | 40.0% | |
| TTGATGCGATTAGAGAGCTT+GGG | + | chr8_1:36850139-36850158 | Msa1191930:CDS | 40.0% | |
| ATTAGAGAGCTTGGGAATGA+GGG | + | chr8_1:36850147-36850166 | Msa1191930:CDS | 40.0% | |
| GATGCAGATGTAATAACCAG+AGG | - | chr8_1:36850189-36850208 | None:intergenic | 40.0% | |
| ! | TCATGGCATACCCATCTTTT+AGG | + | chr8_1:36850383-36850402 | Msa1191930:intron | 40.0% |
| ! | CATGGCATACCCATCTTTTA+GGG | + | chr8_1:36850384-36850403 | Msa1191930:intron | 40.0% |
| CGGACATCATACGACAAAAA+CGG | - | chr8_1:36850425-36850444 | None:intergenic | 40.0% | |
| TTAGATGAGCATGCTTAACC+TGG | + | chr8_1:36850572-36850591 | Msa1191930:intron | 40.0% | |
| ATGTCCATGTCTAAGTTTCC+AGG | - | chr8_1:36850593-36850612 | None:intergenic | 40.0% | |
| GGAAACTTAGACATGGACAT+TGG | + | chr8_1:36850593-36850612 | Msa1191930:intron | 40.0% | |
| CAGCCTACACTTCAAATTGA+AGG | - | chr8_1:36850721-36850740 | None:intergenic | 40.0% | |
| !! | GAAAACATGTGTCGATTGAC+AGG | + | chr8_1:36850821-36850840 | Msa1191930:intron | 40.0% |
| ! | TTTTCGCATATGCTCAAGAC+CGG | - | chr8_1:36850925-36850944 | None:intergenic | 40.0% |
| TCAGTGTGTTAAAACCTGGT+GGG | + | chr8_1:36851142-36851161 | Msa1191930:CDS | 40.0% | |
| GGTATCATCTGAAAGGACAA+TGG | - | chr8_1:36851282-36851301 | None:intergenic | 40.0% | |
| ! | GGCAGGATTTTCAGAAATAC+AGG | + | chr8_1:36851326-36851345 | Msa1191930:CDS | 40.0% |
| ! | TGTCCGATGAGTTGAGTAAT+AGG | + | chr8_1:36851551-36851570 | Msa1191930:intron | 40.0% |
| CAGCCTATTACTCAACTCAT+CGG | - | chr8_1:36851557-36851576 | None:intergenic | 40.0% | |
| TCAAATACCAGTAGCAGACT+GGG | - | chr8_1:36851595-36851614 | None:intergenic | 40.0% | |
| ACGACCATTGCTGTAGTTAA+TGG | + | chr8_1:36851614-36851633 | Msa1191930:intron | 40.0% | |
| TACACCACTAGACATGCAAT+AGG | - | chr8_1:36851724-36851743 | None:intergenic | 40.0% | |
| ATTGCATGTCTAGTGGTGTA+TGG | + | chr8_1:36851724-36851743 | Msa1191930:intron | 40.0% | |
| TTGCATGTCTAGTGGTGTAT+GGG | + | chr8_1:36851725-36851744 | Msa1191930:intron | 40.0% | |
| TGGTCAGAGCGATGTTAATA+AGG | - | chr8_1:36851775-36851794 | None:intergenic | 40.0% | |
| AGGGTTGAATCTTTACCAGA+TGG | - | chr8_1:36851991-36852010 | None:intergenic | 40.0% | |
| !! | TCTAGCTTTGTCCCTCTATT+AGG | + | chr8_1:36852013-36852032 | Msa1191930:intron | 40.0% |
| TCACACGTAAGCCTAATAGA+GGG | - | chr8_1:36852027-36852046 | None:intergenic | 40.0% | |
| ATCACACGTAAGCCTAATAG+AGG | - | chr8_1:36852028-36852047 | None:intergenic | 40.0% | |
| TGAAATCGGACCTACAAGAA+AGG | + | chr8_1:36852085-36852104 | Msa1191930:CDS | 40.0% | |
| ! | TTTTTGCAGGCCTTTCTTGT+AGG | - | chr8_1:36852098-36852117 | None:intergenic | 40.0% |
| ! | TCCACATGAGCAATTTTTGC+AGG | - | chr8_1:36852111-36852130 | None:intergenic | 40.0% |
| GCAAAAATTGCTCATGTGGA+AGG | + | chr8_1:36852111-36852130 | Msa1191930:CDS | 40.0% | |
| !! | GAGGAGAAAGTGTTGAAGTT+AGG | + | chr8_1:36852143-36852162 | Msa1191930:CDS | 40.0% |
| AAACTGAGATACCAGGATGT+CGG | - | chr8_1:36852393-36852412 | None:intergenic | 40.0% | |
| ATCCTGGTATCTCAGTTTCA+GGG | + | chr8_1:36852395-36852414 | Msa1191930:intron | 40.0% | |
| ! | GAATAGAAGTATGAGTGCCA+TGG | - | chr8_1:36852504-36852523 | None:intergenic | 40.0% |
| ! | CAAAGAAAGTAGTTTGGTGG+TGG | - | chr8_1:36852743-36852762 | None:intergenic | 40.0% |
| GCTTCTGTCAATTTAGTTGG+AGG | + | chr8_1:36852871-36852890 | Msa1191930:intron | 40.0% | |
| !! | GCATTTGCTGCTTCTGTTTT+CGG | - | chr8_1:36853066-36853085 | None:intergenic | 40.0% |
| !! | GGCAACTTAATCATTGGCTT+TGG | - | chr8_1:36853099-36853118 | None:intergenic | 40.0% |
| TTAGTCATTCTGTGGCTCTT+TGG | - | chr8_1:36853164-36853183 | None:intergenic | 40.0% | |
| GAGTTGAATTGCAATCAGCT+TGG | + | chr8_1:36853390-36853409 | Msa1191930:intron | 40.0% | |
| AGCTTGGTCAGTGAATTTCT+GGG | + | chr8_1:36853406-36853425 | Msa1191930:intron | 40.0% | |
| GAAAATCCCAAACTCTGCAA+GGG | - | chr8_1:36853435-36853454 | None:intergenic | 40.0% | |
| AGAAAATCCCAAACTCTGCA+AGG | - | chr8_1:36853436-36853455 | None:intergenic | 40.0% | |
| TTTGTCTTTGGTCTACAGTG+TGG | + | chr8_1:36853545-36853564 | Msa1191930:intron | 40.0% | |
| TTGTCTTTGGTCTACAGTGT+GGG | + | chr8_1:36853546-36853565 | Msa1191930:intron | 40.0% | |
| ! | TCTCCCTCTCTTAAGTTGTT+TGG | + | chr8_1:36853650-36853669 | Msa1191930:intron | 40.0% |
| GACACCAAACAACTTAAGAG+AGG | - | chr8_1:36853657-36853676 | None:intergenic | 40.0% | |
| TCTATCATATGTCTGCAGCA+AGG | - | chr8_1:36853755-36853774 | None:intergenic | 40.0% | |
| GCTTACGATGCAGAAAACAA+AGG | - | chr8_1:36853983-36854002 | None:intergenic | 40.0% | |
| GCATCAAACACTTGACTGAC+AGG | - | chr8_1:36850126-36850145 | None:intergenic | 45.0% | |
| GATTAGAGAGCTTGGGAATG+AGG | + | chr8_1:36850146-36850165 | Msa1191930:CDS | 45.0% | |
| TTAGAGAGCTTGGGAATGAG+GGG | + | chr8_1:36850148-36850167 | Msa1191930:CDS | 45.0% | |
| GAATGAGGGGGTTGAGAAAT+TGG | + | chr8_1:36850161-36850180 | Msa1191930:CDS | 45.0% | |
| GGTTGAGAAATTGGATCCTC+TGG | + | chr8_1:36850170-36850189 | Msa1191930:CDS | 45.0% | |
| ! | ATAGAAGCACAGAAGCCGAA+AGG | - | chr8_1:36850475-36850494 | None:intergenic | 45.0% |
| ! | GTAACCACATGTGTCACTCT+CGG | + | chr8_1:36850683-36850702 | Msa1191930:intron | 45.0% |
| ! | ATGTTTGAAGTTTGTGGGGG+TGG | + | chr8_1:36850786-36850805 | Msa1191930:intron | 45.0% |
| ! | TGTTTGAAGTTTGTGGGGGT+GGG | + | chr8_1:36850787-36850806 | Msa1191930:intron | 45.0% |
| AACTTCAGGCAAGTTTCCAG+TGG | + | chr8_1:36851041-36851060 | Msa1191930:intron | 45.0% | |
| GGAATCTTCCTCTGTGGATT+TGG | + | chr8_1:36851062-36851081 | Msa1191930:intron | 45.0% | |
| TCTTGAGTCAGTTGGTCGAT+AGG | - | chr8_1:36851117-36851136 | None:intergenic | 45.0% | |
| TGAGGACTTCTTGAGTCAGT+TGG | - | chr8_1:36851125-36851144 | None:intergenic | 45.0% | |
| GTCCTCAGTGTGTTAAAACC+TGG | + | chr8_1:36851138-36851157 | Msa1191930:CDS | 45.0% | |
| !! | CACCAGGTTTTAACACACTG+AGG | - | chr8_1:36851143-36851162 | None:intergenic | 45.0% |
| CTCAGTGTGTTAAAACCTGG+TGG | + | chr8_1:36851141-36851160 | Msa1191930:CDS | 45.0% | |
| AAATCCTCCCAATCTGCTGT+GGG | + | chr8_1:36851180-36851199 | Msa1191930:CDS | 45.0% | |
| ACAGGCGTTACAATCTTCTG+TGG | + | chr8_1:36851344-36851363 | Msa1191930:CDS | 45.0% | |
| GTCAAATACCAGTAGCAGAC+TGG | - | chr8_1:36851596-36851615 | None:intergenic | 45.0% | |
| GGTTGTGAAAAGTTCACCCA+AGG | + | chr8_1:36851888-36851907 | Msa1191930:CDS | 45.0% | |
| AAGAAACCTGAACTGCCATC+TGG | + | chr8_1:36851973-36851992 | Msa1191930:CDS | 45.0% | |
| TCTTTACCAGATGGCAGTTC+AGG | - | chr8_1:36851982-36852001 | None:intergenic | 45.0% | |
| AGAGGGACAAAGCTAGAGAA+GGG | - | chr8_1:36852010-36852029 | None:intergenic | 45.0% | |
| TAGAGGGACAAAGCTAGAGA+AGG | - | chr8_1:36852011-36852030 | None:intergenic | 45.0% | |
| TAGCTGACATGTTGTGCAAC+AGG | + | chr8_1:36852056-36852075 | Msa1191930:intron | 45.0% | |
| AGCTGACATGTTGTGCAACA+GGG | + | chr8_1:36852057-36852076 | Msa1191930:intron | 45.0% | |
| GCAACAGGGGATTGTGAAAT+CGG | + | chr8_1:36852071-36852090 | Msa1191930:intron | 45.0% | |
| GCCTGCAAAAATTGCTCATG+TGG | + | chr8_1:36852107-36852126 | Msa1191930:CDS | 45.0% | |
| TGTTCAAATAGCCGACATCC+TGG | + | chr8_1:36852379-36852398 | Msa1191930:intron | 45.0% | |
| CATCCTGGTATCTCAGTTTC+AGG | + | chr8_1:36852394-36852413 | Msa1191930:intron | 45.0% | |
| AACCCTGAAACTGAGATACC+AGG | - | chr8_1:36852400-36852419 | None:intergenic | 45.0% | |
| TGGTATCTCAGTTTCAGGGT+TGG | + | chr8_1:36852399-36852418 | Msa1191930:intron | 45.0% | |
| GTCAATTCCAAATAGCGGCA+TGG | - | chr8_1:36852430-36852449 | None:intergenic | 45.0% | |
| TGTGGGATGTTGAGTTAGAG+TGG | - | chr8_1:36852691-36852710 | None:intergenic | 45.0% | |
| !! | GTTTGGTGGTGGAGTTTGAT+AGG | - | chr8_1:36852732-36852751 | None:intergenic | 45.0% |
| TCTTCTCACGTGCTTCCTAT+TGG | + | chr8_1:36852918-36852937 | Msa1191930:intron | 45.0% | |
| CTTCTCACGTGCTTCCTATT+GGG | + | chr8_1:36852919-36852938 | Msa1191930:intron | 45.0% | |
| AACTTGCAACAGCTCCCAAT+AGG | - | chr8_1:36852936-36852955 | None:intergenic | 45.0% | |
| ATTGGGAGCTGTTGCAAGTT+TGG | + | chr8_1:36852936-36852955 | Msa1191930:intron | 45.0% | |
| AACCATACGCTGCATTTGCT+AGG | - | chr8_1:36853120-36853139 | None:intergenic | 45.0% | |
| CAGCTTGGTCAGTGAATTTC+TGG | + | chr8_1:36853405-36853424 | Msa1191930:intron | 45.0% | |
| TTTGGTCTACAGTGTGGGTT+AGG | + | chr8_1:36853551-36853570 | Msa1191930:intron | 45.0% | |
| ! | TTGGTCTACAGTGTGGGTTA+GGG | + | chr8_1:36853552-36853571 | Msa1191930:intron | 45.0% |
| ! | TACCTTCTCGCCCATTTTGA+AGG | - | chr8_1:36853621-36853640 | None:intergenic | 45.0% |
| ! | TTTTTGCAGGTTGCACTGTC+CGG | + | chr8_1:36853723-36853742 | Msa1191930:intron | 45.0% |
| TGTAACCTTTGTCGTGGGAA+TGG | + | chr8_1:36853781-36853800 | Msa1191930:three_prime_UTR | 45.0% | |
| TTATGCCATTCCCACGACAA+AGG | - | chr8_1:36853789-36853808 | None:intergenic | 45.0% | |
| !! | ATAATGATTTAATTAAAAAT+TGG | - | chr8_1:36852268-36852287 | None:intergenic | 5.0% |
| !! | TGGTGCTGTGTTGGCATGTA+CGG | + | chr8_1:36850086-36850105 | Msa1191930:CDS | 50.0% |
| TAGAGAGCTTGGGAATGAGG+GGG | + | chr8_1:36850149-36850168 | Msa1191930:CDS | 50.0% | |
| !! | TGTGTCGATTGACAGGGTCT+TGG | + | chr8_1:36850828-36850847 | Msa1191930:intron | 50.0% |
| GCACTGCACATGCGGAAAAT+GGG | - | chr8_1:36850898-36850917 | None:intergenic | 50.0% | |
| AGCACTGCACATGCGGAAAA+TGG | - | chr8_1:36850899-36850918 | None:intergenic | 50.0% | |
| TCCAGTGGAATCTTCCTCTG+TGG | + | chr8_1:36851056-36851075 | Msa1191930:intron | 50.0% | |
| TCCACAGAGGAAGATTCCAC+TGG | - | chr8_1:36851060-36851079 | None:intergenic | 50.0% | |
| CGAATAAGAGTTGTCCCACC+AGG | - | chr8_1:36851159-36851178 | None:intergenic | 50.0% | |
| CAAATCCTCCCAATCTGCTG+TGG | + | chr8_1:36851179-36851198 | Msa1191930:CDS | 50.0% | |
| ACCTGAACCCACAGCAGATT+GGG | - | chr8_1:36851190-36851209 | None:intergenic | 50.0% | |
| TGCTGTGGGTTCAGGTGATA+AGG | + | chr8_1:36851194-36851213 | Msa1191930:CDS | 50.0% | |
| GCTGACATGTTGTGCAACAG+GGG | + | chr8_1:36852058-36852077 | Msa1191930:intron | 50.0% | |
| ATGTGGAAGGGCAGAAGAAG+AGG | + | chr8_1:36852124-36852143 | Msa1191930:CDS | 50.0% | |
| ACACTGCCACAAGCTGATTG+AGG | - | chr8_1:36852194-36852213 | None:intergenic | 50.0% | |
| TGCCTAGCAAATGCAGCGTA+TGG | + | chr8_1:36853115-36853134 | Msa1191930:intron | 50.0% | |
| TGGGATTCCCTTGCAGAGTT+TGG | + | chr8_1:36853425-36853444 | Msa1191930:intron | 50.0% | |
| GGGATTCCCTTGCAGAGTTT+GGG | + | chr8_1:36853426-36853445 | Msa1191930:intron | 50.0% | |
| !! | TGGTCTACAGTGTGGGTTAG+GGG | + | chr8_1:36853553-36853572 | Msa1191930:intron | 50.0% |
| TGCAGTACCTGCCCTTACAA+GGG | + | chr8_1:36853587-36853606 | Msa1191930:CDS | 50.0% | |
| GGACTGCCTGCCTTCAAAAT+GGG | + | chr8_1:36853608-36853627 | Msa1191930:CDS | 50.0% | |
| !! | TTCTCGCCCATTTTGAAGGC+AGG | - | chr8_1:36853617-36853636 | None:intergenic | 50.0% |
| TGCCTTCAAAATGGGCGAGA+AGG | + | chr8_1:36853616-36853635 | Msa1191930:CDS | 50.0% | |
| GTCTGCAGCAAGGAAGTTAC+CGG | - | chr8_1:36853745-36853764 | None:intergenic | 50.0% | |
| GTGTCCGAGAGTGACACATG+TGG | - | chr8_1:36850690-36850709 | None:intergenic | 55.0% | |
| TTGAAGTTTGTGGGGGTGGG+TGG | + | chr8_1:36850790-36850809 | Msa1191930:intron | 55.0% | |
| TGAAGTTTGTGGGGGTGGGT+GGG | + | chr8_1:36850791-36850810 | Msa1191930:intron | 55.0% | |
| GACAGGGTCTTGGCAGAAGT+TGG | + | chr8_1:36850838-36850857 | Msa1191930:intron | 55.0% | |
| TGAACCCACAGCAGATTGGG+AGG | - | chr8_1:36851187-36851206 | None:intergenic | 55.0% | |
| TCCCAATCTGCTGTGGGTTC+AGG | + | chr8_1:36851186-36851205 | Msa1191930:CDS | 55.0% | |
| CACCTGAACCCACAGCAGAT+TGG | - | chr8_1:36851191-36851210 | None:intergenic | 55.0% | |
| CTTGAAGCCCAGTCTGCTAC+TGG | + | chr8_1:36851585-36851604 | Msa1191930:intron | 55.0% | |
| GGACTCTCCATGCCGCTATT+TGG | + | chr8_1:36852420-36852439 | Msa1191930:intron | 55.0% | |
| !! | ATTCGCTGCCGTTGACTCAG+TGG | + | chr8_1:36853001-36853020 | Msa1191930:intron | 55.0% |
| !! | GTGGGTTAGGGGATGCGTTT+AGG | + | chr8_1:36853564-36853583 | Msa1191930:CDS | 55.0% |
| GTGCAGTACCTGCCCTTACA+AGG | + | chr8_1:36853586-36853605 | Msa1191930:CDS | 55.0% | |
| AGGCAGGCAGTCCCTTGTAA+GGG | - | chr8_1:36853601-36853620 | None:intergenic | 55.0% | |
| AAGGCAGGCAGTCCCTTGTA+AGG | - | chr8_1:36853602-36853621 | None:intergenic | 55.0% | |
| GGGACTGCCTGCCTTCAAAA+TGG | + | chr8_1:36853607-36853626 | Msa1191930:CDS | 55.0% | |
| CCGGAGTAGCACTGCACATG+CGG | - | chr8_1:36850906-36850925 | None:intergenic | 60.0% | |
| ! | CCGCATGTGCAGTGCTACTC+CGG | + | chr8_1:36850903-36850922 | Msa1191930:intron | 60.0% |
| AGGCAGTCCCTTGTAAGGGC+AGG | - | chr8_1:36853597-36853616 | None:intergenic | 60.0% | |
| AGTTTGTGGGGGTGGGTGGG+TGG | + | chr8_1:36850794-36850813 | Msa1191930:intron | 65.0% | |
| GTTTGTGGGGGTGGGTGGGT+GGG | + | chr8_1:36850795-36850814 | Msa1191930:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 36850069 | 36854201 | 36850069 | ID=Msa1191930;Name=Msa1191930 |
| chr8_1 | mRNA | 36850069 | 36854201 | 36850069 | ID=Msa1191930-mRNA-1;Parent=Msa1191930;Name=Msa1191930-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.83|0.71|1|0.83|1|7|431|238 |
| chr8_1 | exon | 36850069 | 36850191 | 36850069 | ID=Msa1191930-mRNA-1:exon:12171;Parent=Msa1191930-mRNA-1 |
| chr8_1 | exon | 36851102 | 36851215 | 36851102 | ID=Msa1191930-mRNA-1:exon:12172;Parent=Msa1191930-mRNA-1 |
| chr8_1 | exon | 36851294 | 36851365 | 36851294 | ID=Msa1191930-mRNA-1:exon:12173;Parent=Msa1191930-mRNA-1 |
| chr8_1 | exon | 36851835 | 36851994 | 36851835 | ID=Msa1191930-mRNA-1:exon:12174;Parent=Msa1191930-mRNA-1 |
| chr8_1 | exon | 36852078 | 36852211 | 36852078 | ID=Msa1191930-mRNA-1:exon:12175;Parent=Msa1191930-mRNA-1 |
| chr8_1 | exon | 36853563 | 36853637 | 36853563 | ID=Msa1191930-mRNA-1:exon:12176;Parent=Msa1191930-mRNA-1 |
| chr8_1 | exon | 36853732 | 36854201 | 36853732 | ID=Msa1191930-mRNA-1:exon:12177;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36850069 | 36850191 | 36850069 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36851102 | 36851215 | 36851102 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36851294 | 36851365 | 36851294 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36851835 | 36851994 | 36851835 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36852078 | 36852211 | 36852078 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36853563 | 36853637 | 36853563 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | CDS | 36853732 | 36853770 | 36853732 | ID=Msa1191930-mRNA-1:cds;Parent=Msa1191930-mRNA-1 |
| chr8_1 | three_prime_UTR | 36853771 | 36854201 | 36853771 | ID=Msa1191930-mRNA-1:three_prime_utr;Parent=Msa1191930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
