Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319640 | XP_003594716.1 | 100.000 | 192 | 0 | 0 | 1 | 192 | 1 | 192 | 1.89e-135 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319640 | sp|P57741|PFD3_ARATH | 83.721 | 172 | 28 | 0 | 11 | 182 | 13 | 184 | 6.37e-106 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072420 | Msa0319640 | 0.807235 | 5.580897e-50 | -8.615850e-47 |
| Msa0115870 | Msa0319640 | 0.810622 | 1.051971e-50 | -8.615850e-47 |
| Msa0199340 | Msa0319640 | 0.825991 | 3.465747e-54 | -8.615850e-47 |
| Msa0199620 | Msa0319640 | 0.880069 | 7.431641e-70 | -8.615850e-47 |
| Msa0202490 | Msa0319640 | 0.800914 | 1.152540e-48 | -8.615850e-47 |
| Msa0229150 | Msa0319640 | 0.805350 | 1.393016e-49 | -8.615850e-47 |
| Msa0256140 | Msa0319640 | 0.824612 | 7.345872e-54 | -8.615850e-47 |
| Msa0280370 | Msa0319640 | 0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa0296630 | Msa0319640 | -0.816881 | 4.399162e-52 | -8.615850e-47 |
| Msa0319640 | Msa0377820 | 0.819328 | 1.230172e-52 | -8.615850e-47 |
| Msa0319640 | Msa0385500 | 0.813001 | 3.192461e-51 | -8.615850e-47 |
| Msa0319640 | Msa0431980 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0319640 | Msa0460740 | 0.824326 | 8.576671e-54 | -8.615850e-47 |
| Msa0319640 | Msa0462600 | 0.804414 | 2.185299e-49 | -8.615850e-47 |
| Msa0319640 | Msa0472930 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0319640 | Msa0539410 | 0.800223 | 1.593710e-48 | -8.615850e-47 |
| Msa0319640 | Msa0595170 | 0.813726 | 2.211662e-51 | -8.615850e-47 |
| Msa0319640 | Msa0634890 | 0.812598 | 3.911781e-51 | -8.615850e-47 |
| Msa0319640 | Msa0665100 | 0.801184 | 1.015098e-48 | -8.615850e-47 |
| Msa0319640 | Msa0672100 | 0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa0319640 | Msa0698780 | 0.806591 | 7.634791e-50 | -8.615850e-47 |
| Msa0319640 | Msa0870750 | 0.811046 | 8.515945e-51 | -8.615850e-47 |
| Msa0319640 | Msa0936480 | 0.803747 | 3.006973e-49 | -8.615850e-47 |
| Msa0319640 | Msa1065240 | 0.809913 | 1.496021e-50 | -8.615850e-47 |
| Msa0319640 | Msa1175350 | 0.819653 | 1.037176e-52 | -8.615850e-47 |
| Msa0319640 | Msa1191930 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
| Msa0319640 | Msa1235460 | 0.808913 | 2.452067e-50 | -8.615850e-47 |
| Msa0319640 | Msa1269790 | 0.855199 | 7.404926e-62 | -8.615850e-47 |
| Msa0319640 | Msa1277260 | 0.813576 | 2.386294e-51 | -8.615850e-47 |
| Msa0319640 | Msa1315890 | 0.841023 | 6.110892e-58 | -8.615850e-47 |
| Msa0319640 | Msa1341060 | 0.826837 | 2.178472e-54 | -8.615850e-47 |
| Msa0319640 | Msa1368710 | 0.803239 | 3.833358e-49 | -8.615850e-47 |
| Msa0319640 | Msa1374830 | 0.816556 | 5.202717e-52 | -8.615850e-47 |
| Msa0319640 | Msa1420430 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0319640 | Msa1437860 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0319640 | Msa1445370 | 0.808142 | 3.581588e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319640 | MtrunA17_Chr2g0294251 | 100.000 | 192 | 0 | 0 | 1 | 192 | 1 | 192 | 1.74e-139 | 387 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0319640 | AT5G49510.2 | 83.721 | 172 | 28 | 0 | 11 | 182 | 13 | 184 | 6.48e-107 | 305 |
| Msa0319640 | AT5G49510.1 | 83.721 | 172 | 28 | 0 | 11 | 182 | 13 | 184 | 6.48e-107 | 305 |
Find 45 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTAATCTAAATCAAATT+TGG | 0.077040 | 2_4:-19472588 | Msa0319640:five_prime_UTR |
| AAACTGATTCTGTGTGTTTA+TGG | 0.168432 | 2_4:-19467804 | Msa0319640:CDS |
| CAATTGCTCGTGTTTATAAT+TGG | 0.169849 | 2_4:-19467194 | Msa0319640:CDS |
| TTCCTTCCTGTCTGTAGTTC+TGG | 0.239248 | 2_4:-19467003 | Msa0319640:three_prime_UTR |
| GTTTGCCCAAAGTAGTTTCT+AGG | 0.258157 | 2_4:-19466981 | Msa0319640:three_prime_UTR |
| CTTGTTGAGTTCTCCGTTGA+TGG | 0.269073 | 2_4:+19467166 | None:intergenic |
| TTCTAATCTAAATCAAATTT+GGG | 0.277414 | 2_4:-19472587 | Msa0319640:five_prime_UTR |
| CAAACCTATCTCACTCAATT+AGG | 0.296890 | 2_4:-19472407 | Msa0319640:CDS |
| GTGTATTCTACTCTGCAATT+TGG | 0.355142 | 2_4:-19466837 | Msa0319640:three_prime_UTR |
| AATTGCTCGTGTTTATAATT+GGG | 0.358053 | 2_4:-19467193 | Msa0319640:CDS |
| AGCAACAAGAACTTCTAAAC+TGG | 0.406664 | 2_4:+19467613 | None:intergenic |
| GAGACCTAATTGAGTGAGAT+AGG | 0.406753 | 2_4:+19472403 | None:intergenic |
| CGCGCAGCAAAGGGAACTTC+AGG | 0.407214 | 2_4:-19471387 | Msa0319640:intron |
| TGATTCTGTGTGTTTATGGC+TGG | 0.425847 | 2_4:-19467800 | Msa0319640:CDS |
| GCCTTCTGACACCTCAAAAT+CGG | 0.428491 | 2_4:+19467852 | None:intergenic |
| CCTATCCTAGAAACTACTTT+GGG | 0.439541 | 2_4:+19466976 | None:intergenic |
| TGCGACTTTGCAAGCAAAGA+AGG | 0.447827 | 2_4:-19470412 | Msa0319640:CDS |
| TCCTATCCTAGAAACTACTT+TGG | 0.458624 | 2_4:+19466975 | None:intergenic |
| AGACCTGAGTAATTGTCGTT+TGG | 0.476174 | 2_4:+19467570 | None:intergenic |
| AACTGGCTCTAGCATTATCC+AGG | 0.479058 | 2_4:+19467630 | None:intergenic |
| CCCAAAGTAGTTTCTAGGAT+AGG | 0.497185 | 2_4:-19466976 | Msa0319640:three_prime_UTR |
| TGAAGCTCCTCGCGCAGCAA+AGG | 0.498907 | 2_4:-19471397 | Msa0319640:CDS |
| TTGCAGGCTTCAGCAATACA+AGG | 0.499475 | 2_4:-19471429 | Msa0319640:intron |
| GATTCTGTGTGTTTATGGCT+GGG | 0.504747 | 2_4:-19467799 | Msa0319640:CDS |
| GAAGCTCCTCGCGCAGCAAA+GGG | 0.509666 | 2_4:-19471396 | Msa0319640:CDS |
| CGATTGCAGTGCTTCAACAA+TGG | 0.524135 | 2_4:-19472504 | Msa0319640:exon |
| TTTGTCTTGTATGATCATAC+GGG | 0.549051 | 2_4:-19466859 | Msa0319640:three_prime_UTR |
| GAAGTTCCCTTTGCTGCGCG+AGG | 0.553650 | 2_4:+19471390 | None:intergenic |
| CACAGAATCAGTTTCTTCGA+TGG | 0.555916 | 2_4:+19467813 | None:intergenic |
| GTTGGAATATTCATTAGAAG+AGG | 0.558241 | 2_4:-19467764 | Msa0319640:intron |
| GCGACTTTGCAAGCAAAGAA+GGG | 0.569412 | 2_4:-19470411 | Msa0319640:CDS |
| TGGTTTGCAGGCTAAGATAC+CGG | 0.570733 | 2_4:-19470460 | Msa0319640:intron |
| GCTGGGAGCAAATGTTATGT+TGG | 0.581899 | 2_4:-19467782 | Msa0319640:CDS |
| TCTTCAACAAACTGTGCACC+TGG | 0.582499 | 2_4:+19472434 | None:intergenic |
| TTGCAAGCAAAGAAGGGCAC+CGG | 0.592987 | 2_4:-19470405 | Msa0319640:CDS |
| AACCAGAACTACAGACAGGA+AGG | 0.605903 | 2_4:+19467001 | None:intergenic |
| AGTCCTCAAACGAACCTCAC+CGG | 0.608080 | 2_4:+19470386 | None:intergenic |
| GGCAAACCAGAACTACAGAC+AGG | 0.611996 | 2_4:+19466997 | None:intergenic |
| TTCTTCGTCTTCATCATCAG+CGG | 0.634937 | 2_4:-19472477 | Msa0319640:CDS |
| ATAATTGGGATGTCCATCAA+CGG | 0.640983 | 2_4:-19467179 | Msa0319640:CDS |
| ACAGAACGAAGAGGAATACC+AGG | 0.644106 | 2_4:-19472452 | Msa0319640:CDS |
| AGCAAAGAAGGGCACCGGTG+AGG | 0.645137 | 2_4:-19470400 | Msa0319640:intron |
| GGACCAAACGACAATTACTC+AGG | 0.647185 | 2_4:-19467573 | Msa0319640:intron |
| GACGCATAATCTAAGCTGAA+CGG | 0.653616 | 2_4:+19467063 | None:intergenic |
| TCAGCGGTGACAGAACGAAG+AGG | 0.716817 | 2_4:-19472461 | Msa0319640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCTATATTTTTTATGAA+TGG | - | chr2_4:19467767-19467786 | Msa0319640:CDS | 10.0% |
| !!! | AATTTATTTTATGCTTTAAA+GGG | - | chr2_4:19467897-19467916 | Msa0319640:intron | 10.0% |
| !! | TGTAGTAAATAAATTTAAAA+TGG | + | chr2_4:19471464-19471483 | None:intergenic | 10.0% |
| !! | AATGCAAAAAATAAAATAAA+AGG | + | chr2_4:19472137-19472156 | None:intergenic | 10.0% |
| !! | ACATATATATAAAAAAGAAA+TGG | + | chr2_4:19472455-19472474 | None:intergenic | 10.0% |
| !! | TTTCTAATCTAAATCAAATT+TGG | - | chr2_4:19466815-19466834 | Msa0319640:three_prime_UTR | 15.0% |
| !! | TTCTAATCTAAATCAAATTT+GGG | - | chr2_4:19466816-19466835 | Msa0319640:three_prime_UTR | 15.0% |
| !!! | ATTTCATAATGAAGTAATTT+TGG | - | chr2_4:19467577-19467596 | Msa0319640:CDS | 15.0% |
| !!! | GAATTTATTTTATGCTTTAA+AGG | - | chr2_4:19467896-19467915 | Msa0319640:intron | 15.0% |
| !!! | ATTTATTTTATGCTTTAAAG+GGG | - | chr2_4:19467898-19467917 | Msa0319640:intron | 15.0% |
| !!! | TCTCTTAATAGTTTTTTTAT+AGG | + | chr2_4:19468629-19468648 | None:intergenic | 15.0% |
| !!! | AATTTTAGATAAAACGTTTT+TGG | - | chr2_4:19469071-19469090 | Msa0319640:intron | 15.0% |
| !!! | TTTAGGATTTTATTATCTTA+AGG | + | chr2_4:19470497-19470516 | None:intergenic | 15.0% |
| !!! | TCTATTACTTTAATTTGTTT+AGG | + | chr2_4:19470514-19470533 | None:intergenic | 15.0% |
| !! | AAGATTATACTGTTTAATTA+GGG | + | chr2_4:19470546-19470565 | None:intergenic | 15.0% |
| !! | TAAGATTATACTGTTTAATT+AGG | + | chr2_4:19470547-19470566 | None:intergenic | 15.0% |
| !!! | AAGATAAATCTCTAAAATTA+AGG | - | chr2_4:19470604-19470623 | Msa0319640:intron | 15.0% |
| !! | ATCAATATCCTATTAATATA+AGG | - | chr2_4:19470636-19470655 | Msa0319640:intron | 15.0% |
| !! | TCAATATCCTATTAATATAA+GGG | - | chr2_4:19470637-19470656 | Msa0319640:intron | 15.0% |
| !! | ATAAATTTCAAGATAATCAA+GGG | + | chr2_4:19470834-19470853 | None:intergenic | 15.0% |
| !! | TATAAATTTCAAGATAATCA+AGG | + | chr2_4:19470835-19470854 | None:intergenic | 15.0% |
| !!! | GTATATAAAGGTATAATTTA+GGG | + | chr2_4:19470970-19470989 | None:intergenic | 15.0% |
| !!! | AGTATATAAAGGTATAATTT+AGG | + | chr2_4:19470971-19470990 | None:intergenic | 15.0% |
| !!! | TGAAAAAAAGAAGTATATAA+AGG | + | chr2_4:19470982-19471001 | None:intergenic | 15.0% |
| !!! | ATATACTTCTTTTTTTCAAA+TGG | - | chr2_4:19470984-19471003 | Msa0319640:intron | 15.0% |
| !!! | TATACTTCTTTTTTTCAAAT+GGG | - | chr2_4:19470985-19471004 | Msa0319640:intron | 15.0% |
| !!! | ATAACATTATATTTTGTCAA+TGG | - | chr2_4:19471204-19471223 | Msa0319640:intron | 15.0% |
| !! | AATTCATCAAAATTAAAAAC+TGG | + | chr2_4:19472376-19472395 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTTGATGAATTG+TGG | - | chr2_4:19472377-19472396 | Msa0319640:CDS | 15.0% |
| !!! | AAACATTTTTGTATAATTGA+TGG | - | chr2_4:19472515-19472534 | Msa0319640:five_prime_UTR | 15.0% |
| !!! | AACATTTTTGTATAATTGAT+GGG | - | chr2_4:19472516-19472535 | Msa0319640:five_prime_UTR | 15.0% |
| !! | TTCATTTGTATAGTTTAGTT+TGG | - | chr2_4:19467159-19467178 | Msa0319640:CDS | 20.0% |
| !!! | TATGACATTTTAGTACTTTA+TGG | - | chr2_4:19467270-19467289 | Msa0319640:intron | 20.0% |
| !!! | GTAAAGTATTAAGATGAAAA+GGG | - | chr2_4:19467387-19467406 | Msa0319640:intron | 20.0% |
| !!! | GAAAATTTTGGTTTGAATTT+CGG | - | chr2_4:19467495-19467514 | Msa0319640:intron | 20.0% |
| !! | GCATATTATACTTTATCTTT+AGG | - | chr2_4:19468054-19468073 | Msa0319640:intron | 20.0% |
| !! | TAGTTTGATTGAAGATAAAA+AGG | - | chr2_4:19468101-19468120 | Msa0319640:intron | 20.0% |
| !! | AATTACCTTTCTAATTGATT+TGG | - | chr2_4:19468460-19468479 | Msa0319640:intron | 20.0% |
| !!! | ATTACCTTTCTAATTGATTT+GGG | - | chr2_4:19468461-19468480 | Msa0319640:intron | 20.0% |
| !!! | TTTAACATCTTTTCTACTAT+AGG | + | chr2_4:19468493-19468512 | None:intergenic | 20.0% |
| !! | TAGAAAAGATGTTAAAAAAC+AGG | - | chr2_4:19468497-19468516 | Msa0319640:intron | 20.0% |
| !! | AACTATTAAGAGAAACTATT+AGG | - | chr2_4:19468636-19468655 | Msa0319640:intron | 20.0% |
| !!! | GAAATTTTGTGCATTTTATT+TGG | - | chr2_4:19469148-19469167 | Msa0319640:intron | 20.0% |
| !! | AAATTCAACAATTAAACATG+GGG | + | chr2_4:19469401-19469420 | None:intergenic | 20.0% |
| !! | GAAATTCAACAATTAAACAT+GGG | + | chr2_4:19469402-19469421 | None:intergenic | 20.0% |
| !! | TGAAATTCAACAATTAAACA+TGG | + | chr2_4:19469403-19469422 | None:intergenic | 20.0% |
| !!! | TAAACAAAAAATCCTTTTCT+AGG | + | chr2_4:19469710-19469729 | None:intergenic | 20.0% |
| !! | TTGTTCATTATTTATTAGCT+AGG | - | chr2_4:19469792-19469811 | Msa0319640:intron | 20.0% |
| !! | TAAATTCTAATGCTTCTTAA+TGG | - | chr2_4:19470032-19470051 | Msa0319640:intron | 20.0% |
| !!! | ATACTTCTTTTTTTCAAATG+GGG | - | chr2_4:19470986-19471005 | Msa0319640:intron | 20.0% |
| !! | TTTCAAATGTTTGAATGTTA+TGG | - | chr2_4:19471020-19471039 | Msa0319640:intron | 20.0% |
| !!! | TTTTAAATAGTTGCATCATA+AGG | + | chr2_4:19471441-19471460 | None:intergenic | 20.0% |
| !!! | TATTATAGTTGTTTTTTCCT+CGG | - | chr2_4:19471683-19471702 | Msa0319640:intron | 20.0% |
| !! | TAAATTTATGTTAACATCAG+AGG | - | chr2_4:19471913-19471932 | Msa0319640:intron | 20.0% |
| !! | AAATTTATGTTAACATCAGA+GGG | - | chr2_4:19471914-19471933 | Msa0319640:intron | 20.0% |
| !!! | TATTGATTGTATATGTTATC+AGG | - | chr2_4:19472183-19472202 | Msa0319640:intron | 20.0% |
| !!! | ATTTGTTGTCGTTTTGTTTT+GGG | + | chr2_4:19466853-19466872 | None:intergenic | 25.0% |
| !!! | TATTTGTTGTCGTTTTGTTT+TGG | + | chr2_4:19466854-19466873 | None:intergenic | 25.0% |
| !!! | TCTCAAAATCTCATTTTTCA+TGG | - | chr2_4:19467088-19467107 | Msa0319640:three_prime_UTR | 25.0% |
| !! | AATTACTAACAGTAGGTTTT+AGG | - | chr2_4:19467365-19467384 | Msa0319640:intron | 25.0% |
| !! | GGTAAAGTATTAAGATGAAA+AGG | - | chr2_4:19467386-19467405 | Msa0319640:intron | 25.0% |
| ! | TTAAACTGAATGTGATTATG+AGG | - | chr2_4:19467422-19467441 | Msa0319640:intron | 25.0% |
| ! | AATGTGATTATGAGGTAAAT+TGG | - | chr2_4:19467430-19467449 | Msa0319640:intron | 25.0% |
| ! | GAGGTAAATTGGATTAATAT+AGG | - | chr2_4:19467441-19467460 | Msa0319640:intron | 25.0% |
| !! | ATTACAGTCTTCGAAAATTT+TGG | - | chr2_4:19467483-19467502 | Msa0319640:intron | 25.0% |
| ! | TATAGTTAGATTAGTGAATG+AGG | - | chr2_4:19467647-19467666 | Msa0319640:CDS | 25.0% |
| ! | CAACTATTAATAACAAAGCA+AGG | + | chr2_4:19467817-19467836 | None:intergenic | 25.0% |
| ! | TTTGCAAGTTAATATTGCAT+TGG | - | chr2_4:19467857-19467876 | Msa0319640:CDS | 25.0% |
| ! | CAAACTATTAACAAACTACA+AGG | + | chr2_4:19468088-19468107 | None:intergenic | 25.0% |
| ! | TTGAAATCTTAAAATGCCAT+TGG | + | chr2_4:19468161-19468180 | None:intergenic | 25.0% |
| !!! | CATTTTAAGATTTCAACTTC+TGG | - | chr2_4:19468165-19468184 | Msa0319640:intron | 25.0% |
| !!! | TTACCTTTCTAATTGATTTG+GGG | - | chr2_4:19468462-19468481 | Msa0319640:intron | 25.0% |
| ! | AGATTTAGACATTAATGAGT+TGG | - | chr2_4:19468661-19468680 | Msa0319640:intron | 25.0% |
| !! | GTTGTTTGTTTGTTCTATTT+TGG | - | chr2_4:19468808-19468827 | Msa0319640:intron | 25.0% |
| ! | TATCTTTCAAATGTTCAGAT+TGG | - | chr2_4:19469099-19469118 | Msa0319640:intron | 25.0% |
| ! | ATATACAAGCACTAATTACA+TGG | - | chr2_4:19469257-19469276 | Msa0319640:intron | 25.0% |
| ! | TAAATATACCTCTAGACAAA+AGG | + | chr2_4:19469292-19469311 | None:intergenic | 25.0% |
| ! | AATTCAACAATTAAACATGG+GGG | + | chr2_4:19469400-19469419 | None:intergenic | 25.0% |
| ! | AGATGATGAATCAACTATTA+GGG | + | chr2_4:19469559-19469578 | None:intergenic | 25.0% |
| ! | TAGAACTACATCTTTATGTT+GGG | + | chr2_4:19469634-19469653 | None:intergenic | 25.0% |
| ! | TTAGAACTACATCTTTATGT+TGG | + | chr2_4:19469635-19469654 | None:intergenic | 25.0% |
| ! | AGTATTATCCAATTCTAACT+TGG | - | chr2_4:19470394-19470413 | Msa0319640:intron | 25.0% |
| ! | TTATACTGTTTAATTAGGGT+AGG | + | chr2_4:19470542-19470561 | None:intergenic | 25.0% |
| !!! | ATATAAAAGTACTACGTGTA+AGG | + | chr2_4:19471263-19471282 | None:intergenic | 25.0% |
| ! | ATCAGTTACATTGAAAACTA+AGG | - | chr2_4:19471281-19471300 | Msa0319640:intron | 25.0% |
| ! | GCAGTAACTATTGTATAAAA+AGG | + | chr2_4:19471325-19471344 | None:intergenic | 25.0% |
| !! | GAATTGATAATCGTTACTTA+GGG | + | chr2_4:19471370-19471389 | None:intergenic | 25.0% |
| ! | TGTAAGTTAAAATTTAACCG+AGG | + | chr2_4:19471703-19471722 | None:intergenic | 25.0% |
| ! | TGTGAAAAGCAAAAAAAATG+AGG | + | chr2_4:19471878-19471897 | None:intergenic | 25.0% |
| ! | AATTGCTCGTGTTTATAATT+GGG | - | chr2_4:19472210-19472229 | Msa0319640:intron | 25.0% |
| !! | TTTTGTCTTGTATGATCATA+CGG | - | chr2_4:19472543-19472562 | Msa0319640:five_prime_UTR | 25.0% |
| !! | AAGTTTCTTCTGAAGTGTTA+TGG | - | chr2_4:19467234-19467253 | Msa0319640:intron | 30.0% |
| !! | AGTTTCTTCTGAAGTGTTAT+GGG | - | chr2_4:19467235-19467254 | Msa0319640:intron | 30.0% |
| CGTAGATAATTACTAACAGT+AGG | - | chr2_4:19467358-19467377 | Msa0319640:intron | 30.0% | |
| AGTATTAAGATGAAAAGGGA+TGG | - | chr2_4:19467391-19467410 | Msa0319640:intron | 30.0% | |
| ! | GAAAATTCGTGATTTTGGAT+TGG | - | chr2_4:19467526-19467545 | Msa0319640:intron | 30.0% |
| ! | GTACTTAGATTTTCATTCTC+TGG | - | chr2_4:19467708-19467727 | Msa0319640:intron | 30.0% |
| TTGAAACTAGAAAGAACCAA+TGG | - | chr2_4:19468142-19468161 | Msa0319640:intron | 30.0% | |
| ! | TAAGATTTCAACTTCTGGAA+AGG | - | chr2_4:19468170-19468189 | Msa0319640:intron | 30.0% |
| !!! | TTTCGTTTTGAAAACATGCA+TGG | - | chr2_4:19468296-19468315 | Msa0319640:intron | 30.0% |
| !!! | TTCGTTTTGAAAACATGCAT+GGG | - | chr2_4:19468297-19468316 | Msa0319640:intron | 30.0% |
| TTAAACAAGACTAGACAGTT+TGG | - | chr2_4:19468321-19468340 | Msa0319640:intron | 30.0% | |
| AAAATGCAACAACTTTGGAT+TGG | + | chr2_4:19468390-19468409 | None:intergenic | 30.0% | |
| AGATGTTAAAAAACAGGCTT+AGG | - | chr2_4:19468503-19468522 | Msa0319640:intron | 30.0% | |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr2_4:19468673-19468692 | Msa0319640:intron | 30.0% |
| GTTCTATCACAAACCATATT+TGG | + | chr2_4:19468689-19468708 | None:intergenic | 30.0% | |
| ! | TGGTTTGTGATAGAACATTA+TGG | - | chr2_4:19468693-19468712 | Msa0319640:intron | 30.0% |
| ! | TCTAAGCACTTTTCAATATC+CGG | + | chr2_4:19468965-19468984 | None:intergenic | 30.0% |
| CTATTTACTACATCCTTAAG+AGG | - | chr2_4:19469218-19469237 | Msa0319640:intron | 30.0% | |
| AGAAAAGAAAATTGAAGGCA+TGG | + | chr2_4:19469470-19469489 | None:intergenic | 30.0% | |
| ! | ATGCCTTCAATTTTCTTTTC+TGG | - | chr2_4:19469469-19469488 | Msa0319640:intron | 30.0% |
| ! | TGCCTTCAATTTTCTTTTCT+GGG | - | chr2_4:19469470-19469489 | Msa0319640:intron | 30.0% |
| TACCCAGAAAAGAAAATTGA+AGG | + | chr2_4:19469475-19469494 | None:intergenic | 30.0% | |
| GATGATGAATCAACTATTAG+GGG | + | chr2_4:19469558-19469577 | None:intergenic | 30.0% | |
| GAGATGATGAATCAACTATT+AGG | + | chr2_4:19469560-19469579 | None:intergenic | 30.0% | |
| ! | AGTTCTAACTAGAAGAGTTT+AGG | + | chr2_4:19469845-19469864 | None:intergenic | 30.0% |
| TTCACTATACCTTGAATCAT+TGG | - | chr2_4:19470056-19470075 | Msa0319640:intron | 30.0% | |
| CGTAAAAGAATTAGTTAAGG+AGG | + | chr2_4:19470096-19470115 | None:intergenic | 30.0% | |
| GCTCGTAAAAGAATTAGTTA+AGG | + | chr2_4:19470099-19470118 | None:intergenic | 30.0% | |
| AACACAGTGTTGTCAAATAT+CGG | + | chr2_4:19470293-19470312 | None:intergenic | 30.0% | |
| AATGGGAGTTAATTCTACAT+TGG | + | chr2_4:19470343-19470362 | None:intergenic | 30.0% | |
| !! | GTATTTCGGGTTTCTTTAAT+GGG | + | chr2_4:19470360-19470379 | None:intergenic | 30.0% |
| !! | AGTATTTCGGGTTTCTTTAA+TGG | + | chr2_4:19470361-19470380 | None:intergenic | 30.0% |
| AACATTGTCCAAGTTAGAAT+TGG | + | chr2_4:19470405-19470424 | None:intergenic | 30.0% | |
| TCAAAGTCCTCCATTAAATA+AGG | - | chr2_4:19470452-19470471 | Msa0319640:CDS | 30.0% | |
| !! | TAAGATGCCTTATTTAATGG+AGG | + | chr2_4:19470462-19470481 | None:intergenic | 30.0% |
| !! | CCTTAAGATGCCTTATTTAA+TGG | + | chr2_4:19470465-19470484 | None:intergenic | 30.0% |
| ! | CCATTAAATAAGGCATCTTA+AGG | - | chr2_4:19470462-19470481 | Msa0319640:intron | 30.0% |
| AGCATGACCCTTATATTAAT+AGG | + | chr2_4:19470647-19470666 | None:intergenic | 30.0% | |
| ! | GCTTGTTAAGGATTCAAAAA+TGG | - | chr2_4:19470678-19470697 | Msa0319640:intron | 30.0% |
| GCTTGTTTAGAAATCTAAAG+AGG | + | chr2_4:19470786-19470805 | None:intergenic | 30.0% | |
| AGTACTGTATGTTTAATGCT+AGG | + | chr2_4:19470925-19470944 | None:intergenic | 30.0% | |
| ! | CTCAAATTTGCATCTTGTTT+AGG | - | chr2_4:19471048-19471067 | Msa0319640:intron | 30.0% |
| ATTACGGATGTAACATCATT+TGG | + | chr2_4:19471079-19471098 | None:intergenic | 30.0% | |
| !!! | GTGTTGATAATTTTCTTGCA+GGG | + | chr2_4:19471176-19471195 | None:intergenic | 30.0% |
| !!! | AGTGTTGATAATTTTCTTGC+AGG | + | chr2_4:19471177-19471196 | None:intergenic | 30.0% |
| ! | GGAATTGATAATCGTTACTT+AGG | + | chr2_4:19471371-19471390 | None:intergenic | 30.0% |
| TTACACTACACAAAATGATG+AGG | + | chr2_4:19471392-19471411 | None:intergenic | 30.0% | |
| AGAAGATTTATGTTTGACCT+TGG | - | chr2_4:19471512-19471531 | Msa0319640:intron | 30.0% | |
| ! | AAACTGATTCTGTGTGTTTA+TGG | - | chr2_4:19471599-19471618 | Msa0319640:intron | 30.0% |
| GTTGGAATATTCATTAGAAG+AGG | - | chr2_4:19471639-19471658 | Msa0319640:intron | 30.0% | |
| !!! | AGGTACGTGTATTTTAGTTT+TGG | - | chr2_4:19471659-19471678 | Msa0319640:intron | 30.0% |
| !!! | GGTACGTGTATTTTAGTTTT+GGG | - | chr2_4:19471660-19471679 | Msa0319640:intron | 30.0% |
| ! | ACAATATGATTTTCTGTTGC+AGG | - | chr2_4:19471728-19471747 | Msa0319640:intron | 30.0% |
| ATAAGAATGCAAAGGAATGA+AGG | + | chr2_4:19471996-19472015 | None:intergenic | 30.0% | |
| CATTCCTTTGCATTCTTATT+AGG | - | chr2_4:19471997-19472016 | Msa0319640:intron | 30.0% | |
| CAATTGCTCGTGTTTATAAT+TGG | - | chr2_4:19472209-19472228 | Msa0319640:intron | 30.0% | |
| TTTGTCTTGTATGATCATAC+GGG | - | chr2_4:19472544-19472563 | Msa0319640:five_prime_UTR | 30.0% | |
| CAAACCTATCTCACTCAATT+AGG | - | chr2_4:19466996-19467015 | Msa0319640:three_prime_UTR | 35.0% | |
| !! | GTTTCTTCTGAAGTGTTATG+GGG | - | chr2_4:19467236-19467255 | Msa0319640:intron | 35.0% |
| ! | GTGTGAAAGAGTATGTTTAG+CGG | - | chr2_4:19467292-19467311 | Msa0319640:intron | 35.0% |
| !!! | TTTTGGTTTGAATTTCGGAG+TGG | - | chr2_4:19467500-19467519 | Msa0319640:intron | 35.0% |
| ! | GGTGAGAAAATTCGTGATTT+TGG | - | chr2_4:19467521-19467540 | Msa0319640:intron | 35.0% |
| ! | GCAAGGTGTTTCATTTCATA+TGG | + | chr2_4:19467800-19467819 | None:intergenic | 35.0% |
| ! | TTTTGTGTGAATGATGTCTG+AGG | - | chr2_4:19467942-19467961 | Msa0319640:intron | 35.0% |
| TCTGAGGATATATTTCTTGC+AGG | - | chr2_4:19467958-19467977 | Msa0319640:intron | 35.0% | |
| GAAACAAGCAGTAAACTCTA+TGG | - | chr2_4:19468238-19468257 | Msa0319640:intron | 35.0% | |
| AAGCAGTAAACTCTATGGTT+TGG | - | chr2_4:19468243-19468262 | Msa0319640:intron | 35.0% | |
| AGCAGTAAACTCTATGGTTT+GGG | - | chr2_4:19468244-19468263 | Msa0319640:intron | 35.0% | |
| TGCAGAAAATGCAACAACTT+TGG | + | chr2_4:19468395-19468414 | None:intergenic | 35.0% | |
| CTACCCCAAATCAATTAGAA+AGG | + | chr2_4:19468468-19468487 | None:intergenic | 35.0% | |
| ! | AAAAACAGGCTTAGGTTGTT+TGG | - | chr2_4:19468511-19468530 | Msa0319640:intron | 35.0% |
| ! | AAAACAGGCTTAGGTTGTTT+GGG | - | chr2_4:19468512-19468531 | Msa0319640:intron | 35.0% |
| GTGCGAAAGAGTAAATCATA+TGG | - | chr2_4:19468571-19468590 | Msa0319640:intron | 35.0% | |
| CGAAAGAGTAAATCATATGG+AGG | - | chr2_4:19468574-19468593 | Msa0319640:intron | 35.0% | |
| TAAATCATATGGAGGAGAGT+CGG | - | chr2_4:19468582-19468601 | Msa0319640:intron | 35.0% | |
| CATAGTAGTGACACTATTTG+TGG | - | chr2_4:19468920-19468939 | Msa0319640:intron | 35.0% | |
| TGAGAAATCAGAACCTCTTA+AGG | + | chr2_4:19469234-19469253 | None:intergenic | 35.0% | |
| ! | TTGTTCTTGTTGTCACATGA+TGG | - | chr2_4:19469313-19469332 | Msa0319640:intron | 35.0% |
| TCAAGCCATTAACTTCTTCA+TGG | + | chr2_4:19469376-19469395 | None:intergenic | 35.0% | |
| !!! | TTTTTTTGCCTGCTGGAATT+TGG | - | chr2_4:19469518-19469537 | Msa0319640:intron | 35.0% |
| ! | CTCTTCTAGTTAGAACTCTT+TGG | - | chr2_4:19469848-19469867 | Msa0319640:intron | 35.0% |
| ATGTCAGAATAAGTGTGACA+TGG | - | chr2_4:19469900-19469919 | Msa0319640:intron | 35.0% | |
| AAGAACAGACCAATGATTCA+AGG | + | chr2_4:19470068-19470087 | None:intergenic | 35.0% | |
| AAGAATTAGTTAAGGAGGAC+CGG | + | chr2_4:19470091-19470110 | None:intergenic | 35.0% | |
| ! | GTCATAAATGAGTTGGACAT+GGG | + | chr2_4:19470130-19470149 | None:intergenic | 35.0% |
| ! | TGTCATAAATGAGTTGGACA+TGG | + | chr2_4:19470131-19470150 | None:intergenic | 35.0% |
| ! | CAGTCTTGTCATAAATGAGT+TGG | + | chr2_4:19470137-19470156 | None:intergenic | 35.0% |
| TGACATCTACAGGAATGATA+TGG | + | chr2_4:19470160-19470179 | None:intergenic | 35.0% | |
| ATGATTAGAGTGACATCTAC+AGG | + | chr2_4:19470170-19470189 | None:intergenic | 35.0% | |
| ATCCTTCACAAAATTGGCTA+CGG | - | chr2_4:19470246-19470265 | Msa0319640:intron | 35.0% | |
| GGATAATACTCCACACTTAA+GGG | + | chr2_4:19470384-19470403 | None:intergenic | 35.0% | |
| TGGATAATACTCCACACTTA+AGG | + | chr2_4:19470385-19470404 | None:intergenic | 35.0% | |
| ! | AGGACGTTTTATCTTGGAAA+CGG | + | chr2_4:19470766-19470785 | None:intergenic | 35.0% |
| ! | CTAAAGAGGACGTTTTATCT+TGG | + | chr2_4:19470772-19470791 | None:intergenic | 35.0% |
| AATGCTAACAAGTGACCTAA+GGG | + | chr2_4:19470810-19470829 | None:intergenic | 35.0% | |
| AAATGCTAACAAGTGACCTA+AGG | + | chr2_4:19470811-19470830 | None:intergenic | 35.0% | |
| TCCGTAATGTAGAATGTGAA+TGG | - | chr2_4:19471091-19471110 | Msa0319640:intron | 35.0% | |
| CCCATTCACATTCTACATTA+CGG | + | chr2_4:19471095-19471114 | None:intergenic | 35.0% | |
| CCGTAATGTAGAATGTGAAT+GGG | - | chr2_4:19471092-19471111 | Msa0319640:intron | 35.0% | |
| TTGTATGTTAGTCCTGGAAA+GGG | + | chr2_4:19471147-19471166 | None:intergenic | 35.0% | |
| ! | ATAATTTTCTTGCAGGGTAG+GGG | + | chr2_4:19471170-19471189 | None:intergenic | 35.0% |
| ! | GATAATTTTCTTGCAGGGTA+GGG | + | chr2_4:19471171-19471190 | None:intergenic | 35.0% |
| ! | TGATAATTTTCTTGCAGGGT+AGG | + | chr2_4:19471172-19471191 | None:intergenic | 35.0% |
| TGAAAACTAAGGTTTGTGAG+TGG | - | chr2_4:19471292-19471311 | Msa0319640:intron | 35.0% | |
| TAGTTACTGCTAGTATGCTA+TGG | - | chr2_4:19471335-19471354 | Msa0319640:intron | 35.0% | |
| TGCATCATAAGGCTTCAAAA+TGG | + | chr2_4:19471430-19471449 | None:intergenic | 35.0% | |
| TTATGTTTGACCTTGGATAC+AGG | - | chr2_4:19471519-19471538 | Msa0319640:intron | 35.0% | |
| CTTGCCTAATAAGAATGCAA+AGG | + | chr2_4:19472004-19472023 | None:intergenic | 35.0% | |
| TATCCCAGATGCATCTATAA+GGG | + | chr2_4:19472105-19472124 | None:intergenic | 35.0% | |
| ATATCCCAGATGCATCTATA+AGG | + | chr2_4:19472106-19472125 | None:intergenic | 35.0% | |
| ATAATTGGGATGTCCATCAA+CGG | - | chr2_4:19472224-19472243 | Msa0319640:intron | 35.0% | |
| CCTATCCTAGAAACTACTTT+GGG | + | chr2_4:19472430-19472449 | None:intergenic | 35.0% | |
| TCCTATCCTAGAAACTACTT+TGG | + | chr2_4:19472431-19472450 | None:intergenic | 35.0% | |
| GTGTATTCTACTCTGCAATT+TGG | - | chr2_4:19472566-19472585 | Msa0319640:five_prime_UTR | 35.0% | |
| TTCTTCGTCTTCATCATCAG+CGG | - | chr2_4:19466926-19466945 | Msa0319640:three_prime_UTR | 40.0% | |
| GAGACCTAATTGAGTGAGAT+AGG | + | chr2_4:19467003-19467022 | None:intergenic | 40.0% | |
| !! | CTCTCGCTTTTCTTCAAGAA+AGG | - | chr2_4:19467036-19467055 | Msa0319640:three_prime_UTR | 40.0% |
| GTTAACTGCTTCTGTATCAC+TGG | - | chr2_4:19467615-19467634 | Msa0319640:CDS | 40.0% | |
| ! | TCGCATTTTTATGCCAGCAT+AGG | - | chr2_4:19468206-19468225 | Msa0319640:intron | 40.0% |
| AGTCGGATCAAAAAAGGTAG+AGG | - | chr2_4:19468599-19468618 | Msa0319640:intron | 40.0% | |
| AAACCTTATCCCACTAAGTG+GGG | + | chr2_4:19468742-19468761 | None:intergenic | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | + | chr2_4:19468743-19468762 | None:intergenic | 40.0% | |
| GACAGACACAGAATAGCATT+TGG | + | chr2_4:19468863-19468882 | None:intergenic | 40.0% | |
| AGTAGTGACACTATTTGTGG+TGG | - | chr2_4:19468923-19468942 | Msa0319640:intron | 40.0% | |
| ATACCTCTAGACAAAAGGCA+TGG | + | chr2_4:19469287-19469306 | None:intergenic | 40.0% | |
| GTCGTCCATGAAGAAGTTAA+TGG | - | chr2_4:19469368-19469387 | Msa0319640:intron | 40.0% | |
| !!! | GAAAACGTTTTTTTGCCTGC+TGG | - | chr2_4:19469511-19469530 | Msa0319640:intron | 40.0% |
| ATCAATAGCCAAATTCCAGC+AGG | + | chr2_4:19469529-19469548 | None:intergenic | 40.0% | |
| GTACTCATGAACAGAACAAC+AGG | - | chr2_4:19469766-19469785 | Msa0319640:intron | 40.0% | |
| CAACTAGTGACAAAAGGCTT+TGG | + | chr2_4:19469944-19469963 | None:intergenic | 40.0% | |
| ! | CAAAGCCTTTTGTCACTAGT+TGG | - | chr2_4:19469942-19469961 | Msa0319640:intron | 40.0% |
| CAACACCAACTAGTGACAAA+AGG | + | chr2_4:19469950-19469969 | None:intergenic | 40.0% | |
| !! | CTTTTGTCACTAGTTGGTGT+TGG | - | chr2_4:19469948-19469967 | Msa0319640:intron | 40.0% |
| ACGATACATGATAGGACATC+GGG | + | chr2_4:19469994-19470013 | None:intergenic | 40.0% | |
| CACGATACATGATAGGACAT+CGG | + | chr2_4:19469995-19470014 | None:intergenic | 40.0% | |
| TGTCCTATCATGTATCGTGT+CGG | - | chr2_4:19469996-19470015 | Msa0319640:intron | 40.0% | |
| ! | GAATCATTGGTCTGTTCTTC+CGG | - | chr2_4:19470069-19470088 | Msa0319640:intron | 40.0% |
| ! | AATTTTGTGAAGGATGGAGG+CGG | + | chr2_4:19470241-19470260 | None:intergenic | 40.0% |
| ! | GTAGCCAATTTTGTGAAGGA+TGG | + | chr2_4:19470247-19470266 | None:intergenic | 40.0% |
| !!! | AAATATCGGTGGTGGGTTTT+TGG | + | chr2_4:19470279-19470298 | None:intergenic | 40.0% |
| TGTTGTCAAATATCGGTGGT+GGG | + | chr2_4:19470286-19470305 | None:intergenic | 40.0% | |
| ACAGTGTTGTCAAATATCGG+TGG | + | chr2_4:19470290-19470309 | None:intergenic | 40.0% | |
| !! | CACACTTAAGGGAGTATTTC+GGG | + | chr2_4:19470373-19470392 | None:intergenic | 40.0% |
| !! | CCACACTTAAGGGAGTATTT+CGG | + | chr2_4:19470374-19470393 | None:intergenic | 40.0% |
| ! | TAACAAGTGCACGCTTGTTA+AGG | - | chr2_4:19470666-19470685 | Msa0319640:intron | 40.0% |
| ATTTCTAAACAAGCGCCCTT+AGG | - | chr2_4:19470792-19470811 | Msa0319640:intron | 40.0% | |
| GAGTTGTTCAAACTCTGTGA+AGG | + | chr2_4:19470948-19470967 | None:intergenic | 40.0% | |
| GTTGTATGTTAGTCCTGGAA+AGG | + | chr2_4:19471148-19471167 | None:intergenic | 40.0% | |
| GCAATAAGTTCCTGTATCCA+AGG | + | chr2_4:19471532-19471551 | None:intergenic | 40.0% | |
| !!! | GGAACTTATTGCCGATTTTG+AGG | - | chr2_4:19471540-19471559 | Msa0319640:intron | 40.0% |
| CACAGAATCAGTTTCTTCGA+TGG | + | chr2_4:19471593-19471612 | None:intergenic | 40.0% | |
| TGATTCTGTGTGTTTATGGC+TGG | - | chr2_4:19471603-19471622 | Msa0319640:intron | 40.0% | |
| GATTCTGTGTGTTTATGGCT+GGG | - | chr2_4:19471604-19471623 | Msa0319640:intron | 40.0% | |
| TGCTCTTCTACAGAAAAACC+TGG | - | chr2_4:19471755-19471774 | Msa0319640:intron | 40.0% | |
| AGACCTGAGTAATTGTCGTT+TGG | + | chr2_4:19471836-19471855 | None:intergenic | 40.0% | |
| TATGTTAACATCAGAGGGAG+AGG | - | chr2_4:19471919-19471938 | Msa0319640:intron | 40.0% | |
| ATGTTAACATCAGAGGGAGA+GGG | - | chr2_4:19471920-19471939 | Msa0319640:intron | 40.0% | |
| ! | AAATGTGCTGCTGCAGTTTA+TGG | + | chr2_4:19471972-19471991 | None:intergenic | 40.0% |
| ACACCCTTATAGATGCATCT+GGG | - | chr2_4:19472099-19472118 | Msa0319640:intron | 40.0% | |
| GACGCATAATCTAAGCTGAA+CGG | + | chr2_4:19472343-19472362 | None:intergenic | 40.0% | |
| GTTTGCCCAAAGTAGTTTCT+AGG | - | chr2_4:19472422-19472441 | Msa0319640:CDS | 40.0% | |
| !! | CCCAAAGTAGTTTCTAGGAT+AGG | - | chr2_4:19472427-19472446 | Msa0319640:CDS | 40.0% |
| CGATTGCAGTGCTTCAACAA+TGG | - | chr2_4:19466899-19466918 | Msa0319640:three_prime_UTR | 45.0% | |
| ACAGAACGAAGAGGAATACC+AGG | - | chr2_4:19466951-19466970 | Msa0319640:three_prime_UTR | 45.0% | |
| TCTTCAACAAACTGTGCACC+TGG | + | chr2_4:19466972-19466991 | None:intergenic | 45.0% | |
| ! | TCTGAAGTGTTATGGGGAGT+TGG | - | chr2_4:19467242-19467261 | Msa0319640:intron | 45.0% |
| CGACAAGTTAGTATCGTGTC+CGG | - | chr2_4:19467318-19467337 | Msa0319640:intron | 45.0% | |
| !! | CGAAGTACTGACATAGACAC+CGG | + | chr2_4:19467340-19467359 | None:intergenic | 45.0% |
| ! | GGTAGCTTGCAATGTGAATG+AGG | - | chr2_4:19467668-19467687 | Msa0319640:intron | 45.0% |
| TTGCAGGCTTCAGCAATACA+AGG | - | chr2_4:19467974-19467993 | Msa0319640:intron | 45.0% | |
| ! | TATGGTTTGGGCTCGTGTTA+CGG | - | chr2_4:19468256-19468275 | Msa0319640:intron | 45.0% |
| GAGGAGAGTCGGATCAAAAA+AGG | - | chr2_4:19468593-19468612 | Msa0319640:intron | 45.0% | |
| CCAAACCTTATCCCACTAAG+TGG | + | chr2_4:19468744-19468763 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGGTT+TGG | - | chr2_4:19468741-19468760 | Msa0319640:intron | 45.0% | |
| ! | CACTATTTGTGGTGGTTTGC+AGG | - | chr2_4:19468931-19468950 | Msa0319640:intron | 45.0% |
| ! | TGGTTTGCAGGCTAAGATAC+CGG | - | chr2_4:19468943-19468962 | Msa0319640:intron | 45.0% |
| TGCGACTTTGCAAGCAAAGA+AGG | - | chr2_4:19468991-19469010 | Msa0319640:intron | 45.0% | |
| GCGACTTTGCAAGCAAAGAA+GGG | - | chr2_4:19468992-19469011 | Msa0319640:intron | 45.0% | |
| ! | TGACCATGCCTTTTGTCTAG+AGG | - | chr2_4:19469281-19469300 | Msa0319640:intron | 45.0% |
| TCTTCATGGACGACACAAAC+AGG | + | chr2_4:19469362-19469381 | None:intergenic | 45.0% | |
| GCATCGTGAAGTCCTAGAAA+AGG | - | chr2_4:19469695-19469714 | Msa0319640:intron | 45.0% | |
| CTTGTGCACTAATGTGCAGA+TGG | + | chr2_4:19469874-19469893 | None:intergenic | 45.0% | |
| CATCCGACACGATACATGAT+AGG | + | chr2_4:19470002-19470021 | None:intergenic | 45.0% | |
| !! | CAGTATTTGGCTCTCTGTCA+TGG | + | chr2_4:19470209-19470228 | None:intergenic | 45.0% |
| GCCTCCATCCTTCACAAAAT+TGG | - | chr2_4:19470240-19470259 | Msa0319640:intron | 45.0% | |
| ! | GCCAATTTTGTGAAGGATGG+AGG | + | chr2_4:19470244-19470263 | None:intergenic | 45.0% |
| CTTCACAAAATTGGCTACGG+CGG | - | chr2_4:19470249-19470268 | Msa0319640:intron | 45.0% | |
| GTGTTGTCAAATATCGGTGG+TGG | + | chr2_4:19470287-19470306 | None:intergenic | 45.0% | |
| CCGAAATACTCCCTTAAGTG+TGG | - | chr2_4:19470371-19470390 | Msa0319640:intron | 45.0% | |
| TAGGTAAAATCGTCCAGAGG+GGG | + | chr2_4:19470906-19470925 | None:intergenic | 45.0% | |
| CTAGGTAAAATCGTCCAGAG+GGG | + | chr2_4:19470907-19470926 | None:intergenic | 45.0% | |
| GCTAGGTAAAATCGTCCAGA+GGG | + | chr2_4:19470908-19470927 | None:intergenic | 45.0% | |
| TGCTAGGTAAAATCGTCCAG+AGG | + | chr2_4:19470909-19470928 | None:intergenic | 45.0% | |
| AGAATGTGAATGGGTGTGCT+TGG | - | chr2_4:19471101-19471120 | Msa0319640:intron | 45.0% | |
| TAGGGGTTGTATGTTAGTCC+TGG | + | chr2_4:19471153-19471172 | None:intergenic | 45.0% | |
| TGCTAGTATGCTATGGACTC+TGG | - | chr2_4:19471342-19471361 | Msa0319640:intron | 45.0% | |
| GCCTTCTGACACCTCAAAAT+CGG | + | chr2_4:19471554-19471573 | None:intergenic | 45.0% | |
| GCTGGGAGCAAATGTTATGT+TGG | - | chr2_4:19471621-19471640 | Msa0319640:intron | 45.0% | |
| !! | AACTGGCTCTAGCATTATCC+AGG | + | chr2_4:19471776-19471795 | None:intergenic | 45.0% |
| GGACCAAACGACAATTACTC+AGG | - | chr2_4:19471830-19471849 | Msa0319640:intron | 45.0% | |
| TGTTAACATCAGAGGGAGAG+GGG | - | chr2_4:19471921-19471940 | Msa0319640:intron | 45.0% | |
| !! | TCTATAAGGGTGTCCATGGT+AGG | + | chr2_4:19472092-19472111 | None:intergenic | 45.0% |
| !! | TGCATCTATAAGGGTGTCCA+TGG | + | chr2_4:19472096-19472115 | None:intergenic | 45.0% |
| GACACCCTTATAGATGCATC+TGG | - | chr2_4:19472098-19472117 | Msa0319640:intron | 45.0% | |
| CTTGTTGAGTTCTCCGTTGA+TGG | + | chr2_4:19472240-19472259 | None:intergenic | 45.0% | |
| TTCCTTCCTGTCTGTAGTTC+TGG | - | chr2_4:19472400-19472419 | Msa0319640:CDS | 45.0% | |
| AACCAGAACTACAGACAGGA+AGG | + | chr2_4:19472405-19472424 | None:intergenic | 45.0% | |
| TTTATGCCAGCATAGGCTGC+TGG | - | chr2_4:19468213-19468232 | Msa0319640:intron | 50.0% | |
| ! | ATGGTTTGGGCTCGTGTTAC+GGG | - | chr2_4:19468257-19468276 | Msa0319640:intron | 50.0% |
| GGTTGTTTGGGCATGTAGAG+AGG | - | chr2_4:19468524-19468543 | Msa0319640:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr2_4:19468738-19468757 | None:intergenic | 50.0% | |
| ! | TTGCAAGCAAAGAAGGGCAC+CGG | - | chr2_4:19468998-19469017 | Msa0319640:intron | 50.0% |
| AGTCCTCAAACGAACCTCAC+CGG | + | chr2_4:19469020-19469039 | None:intergenic | 50.0% | |
| ! | GAGTTGGACATGGGTTGAGA+CGG | + | chr2_4:19470121-19470140 | None:intergenic | 50.0% |
| CTCTCTGTCATGGACAACAC+TGG | + | chr2_4:19470199-19470218 | None:intergenic | 50.0% | |
| GCGGCTGGTATGACAGTATT+TGG | + | chr2_4:19470222-19470241 | None:intergenic | 50.0% | |
| ! | CGCCGTAGCCAATTTTGTGA+AGG | + | chr2_4:19470251-19470270 | None:intergenic | 50.0% |
| TTATTGCATCATCCCCCCTC+TGG | - | chr2_4:19470890-19470909 | Msa0319640:intron | 50.0% | |
| AGGTAAAATCGTCCAGAGGG+GGG | + | chr2_4:19470905-19470924 | None:intergenic | 50.0% | |
| TGTTAGTCCTGGAAAGGGTG+CGG | + | chr2_4:19471142-19471161 | None:intergenic | 50.0% | |
| !!! | GCCGATTTTGAGGTGTCAGA+AGG | - | chr2_4:19471550-19471569 | Msa0319640:intron | 50.0% |
| GGCAAACCAGAACTACAGAC+AGG | + | chr2_4:19472409-19472428 | None:intergenic | 50.0% | |
| TCAGCGGTGACAGAACGAAG+AGG | - | chr2_4:19466942-19466961 | Msa0319640:three_prime_UTR | 55.0% | |
| TTTCAGCCAGCAGCCTATGC+TGG | + | chr2_4:19468222-19468241 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr2_4:19468730-19468749 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr2_4:19468729-19468748 | Msa0319640:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr2_4:19468730-19468749 | Msa0319640:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr2_4:19468736-19468755 | Msa0319640:intron | 55.0% | |
| CATGGTAGGCATGAAGCTGG+AGG | + | chr2_4:19472078-19472097 | None:intergenic | 55.0% | |
| CTCCAGCTTCATGCCTACCA+TGG | - | chr2_4:19472076-19472095 | Msa0319640:intron | 55.0% | |
| GTCCATGGTAGGCATGAAGC+TGG | + | chr2_4:19472081-19472100 | None:intergenic | 55.0% | |
| TGAAGCTCCTCGCGCAGCAA+AGG | - | chr2_4:19468006-19468025 | Msa0319640:intron | 60.0% | |
| GAAGCTCCTCGCGCAGCAAA+GGG | - | chr2_4:19468007-19468026 | Msa0319640:intron | 60.0% | |
| GAAGTTCCCTTTGCTGCGCG+AGG | + | chr2_4:19468016-19468035 | None:intergenic | 60.0% | |
| CGCGCAGCAAAGGGAACTTC+AGG | - | chr2_4:19468016-19468035 | Msa0319640:intron | 60.0% | |
| !! | AGCAAAGAAGGGCACCGGTG+AGG | - | chr2_4:19469003-19469022 | Msa0319640:intron | 60.0% |
| ! | GCACCGGTGAGGTTCGTTTG+AGG | - | chr2_4:19469014-19469033 | Msa0319640:intron | 60.0% |
| TTGTGAAGGATGGAGGCGGC+TGG | + | chr2_4:19470237-19470256 | None:intergenic | 60.0% | |
| GTTCAAGCCGCACCCTTTCC+AGG | - | chr2_4:19471132-19471151 | Msa0319640:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 19466810 | 19472615 | 19466810 | ID=Msa0319640;Name=Msa0319640 |
| chr2_4 | mRNA | 19466810 | 19472615 | 19466810 | ID=Msa0319640-mRNA-1;Parent=Msa0319640;Name=Msa0319640-mRNA-1;_AED=0.08;_eAED=0.08;_QI=108|1|1|1|1|1|6|324|192 |
| chr2_4 | exon | 19466810 | 19467220 | 19466810 | ID=Msa0319640-mRNA-1:exon:7175;Parent=Msa0319640-mRNA-1 |
| chr2_4 | exon | 19467574 | 19467675 | 19467574 | ID=Msa0319640-mRNA-1:exon:7174;Parent=Msa0319640-mRNA-1 |
| chr2_4 | exon | 19467765 | 19467884 | 19467765 | ID=Msa0319640-mRNA-1:exon:7173;Parent=Msa0319640-mRNA-1 |
| chr2_4 | exon | 19470401 | 19470472 | 19470401 | ID=Msa0319640-mRNA-1:exon:7172;Parent=Msa0319640-mRNA-1 |
| chr2_4 | exon | 19471388 | 19471445 | 19471388 | ID=Msa0319640-mRNA-1:exon:7171;Parent=Msa0319640-mRNA-1 |
| chr2_4 | exon | 19472368 | 19472615 | 19472368 | ID=Msa0319640-mRNA-1:exon:7170;Parent=Msa0319640-mRNA-1 |
| chr2_4 | five_prime_UTR | 19472508 | 19472615 | 19472508 | ID=Msa0319640-mRNA-1:five_prime_utr;Parent=Msa0319640-mRNA-1 |
| chr2_4 | CDS | 19472368 | 19472507 | 19472368 | ID=Msa0319640-mRNA-1:cds;Parent=Msa0319640-mRNA-1 |
| chr2_4 | CDS | 19471388 | 19471445 | 19471388 | ID=Msa0319640-mRNA-1:cds;Parent=Msa0319640-mRNA-1 |
| chr2_4 | CDS | 19470401 | 19470472 | 19470401 | ID=Msa0319640-mRNA-1:cds;Parent=Msa0319640-mRNA-1 |
| chr2_4 | CDS | 19467765 | 19467884 | 19467765 | ID=Msa0319640-mRNA-1:cds;Parent=Msa0319640-mRNA-1 |
| chr2_4 | CDS | 19467574 | 19467675 | 19467574 | ID=Msa0319640-mRNA-1:cds;Parent=Msa0319640-mRNA-1 |
| chr2_4 | CDS | 19467134 | 19467220 | 19467134 | ID=Msa0319640-mRNA-1:cds;Parent=Msa0319640-mRNA-1 |
| chr2_4 | three_prime_UTR | 19466810 | 19467133 | 19466810 | ID=Msa0319640-mRNA-1:three_prime_utr;Parent=Msa0319640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
