Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336450 | XP_003597029.1 | 98.540 | 274 | 4 | 0 | 1 | 274 | 1 | 274 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336450 | sp|Q9LSX7|PEX22_ARATH | 66.667 | 276 | 73 | 3 | 14 | 274 | 11 | 282 | 2.89e-119 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336450 | G7IKL0 | 98.540 | 274 | 4 | 0 | 1 | 274 | 1 | 274 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000910 | Msa0336450 | 0.852782 | 3.682460e-61 | -8.615850e-47 |
| Msa0008200 | Msa0336450 | 0.824656 | 7.172319e-54 | -8.615850e-47 |
| Msa0023480 | Msa0336450 | 0.807244 | 5.556256e-50 | -8.615850e-47 |
| Msa0024400 | Msa0336450 | 0.808235 | 3.421523e-50 | -8.615850e-47 |
| Msa0029630 | Msa0336450 | 0.817548 | 3.115476e-52 | -8.615850e-47 |
| Msa0030300 | Msa0336450 | 0.834880 | 2.320253e-56 | -8.615850e-47 |
| Msa0072420 | Msa0336450 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0077900 | Msa0336450 | 0.807600 | 4.669182e-50 | -8.615850e-47 |
| Msa0091730 | Msa0336450 | 0.826072 | 3.316192e-54 | -8.615850e-47 |
| Msa0093010 | Msa0336450 | 0.806408 | 8.348088e-50 | -8.615850e-47 |
| Msa0106710 | Msa0336450 | 0.806812 | 6.858791e-50 | -8.615850e-47 |
| Msa0120880 | Msa0336450 | 0.802997 | 4.302084e-49 | -8.615850e-47 |
| Msa0122530 | Msa0336450 | 0.846970 | 1.554364e-59 | -8.615850e-47 |
| Msa0125450 | Msa0336450 | 0.819527 | 1.108144e-52 | -8.615850e-47 |
| Msa0125540 | Msa0336450 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0126790 | Msa0336450 | 0.802322 | 5.927579e-49 | -8.615850e-47 |
| Msa0136120 | Msa0336450 | 0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa0144430 | Msa0336450 | 0.826821 | 2.198180e-54 | -8.615850e-47 |
| Msa0147980 | Msa0336450 | 0.813241 | 2.827158e-51 | -8.615850e-47 |
| Msa0149440 | Msa0336450 | 0.841011 | 6.152914e-58 | -8.615850e-47 |
| Msa0162630 | Msa0336450 | 0.809982 | 1.445343e-50 | -8.615850e-47 |
| Msa0163510 | Msa0336450 | 0.828941 | 6.796100e-55 | -8.615850e-47 |
| Msa0171870 | Msa0336450 | 0.809969 | 1.454580e-50 | -8.615850e-47 |
| Msa0173800 | Msa0336450 | 0.805720 | 1.164884e-49 | -8.615850e-47 |
| Msa0190870 | Msa0336450 | 0.961641 | 6.145757e-120 | -8.615850e-47 |
| Msa0191070 | Msa0336450 | 0.816918 | 4.316892e-52 | -8.615850e-47 |
| Msa0194920 | Msa0336450 | 0.822791 | 1.961175e-53 | -8.615850e-47 |
| Msa0202490 | Msa0336450 | 0.831201 | 1.908728e-55 | -8.615850e-47 |
| Msa0204960 | Msa0336450 | 0.826696 | 2.354158e-54 | -8.615850e-47 |
| Msa0215990 | Msa0336450 | 0.877558 | 5.706697e-69 | -8.615850e-47 |
| Msa0217670 | Msa0336450 | 0.881321 | 2.644359e-70 | -8.615850e-47 |
| Msa0223330 | Msa0336450 | 0.831131 | 1.986432e-55 | -8.615850e-47 |
| Msa0230820 | Msa0336450 | 0.840999 | 6.199940e-58 | -8.615850e-47 |
| Msa0236920 | Msa0336450 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
| Msa0237200 | Msa0336450 | 0.808809 | 2.580015e-50 | -8.615850e-47 |
| Msa0237300 | Msa0336450 | 0.854615 | 1.094241e-61 | -8.615850e-47 |
| Msa0244980 | Msa0336450 | 0.817288 | 3.564093e-52 | -8.615850e-47 |
| Msa0245430 | Msa0336450 | 0.817694 | 2.887913e-52 | -8.615850e-47 |
| Msa0245580 | Msa0336450 | 0.818745 | 1.669534e-52 | -8.615850e-47 |
| Msa0256140 | Msa0336450 | 0.861441 | 1.023877e-63 | -8.615850e-47 |
| Msa0257490 | Msa0336450 | 0.849841 | 2.495332e-60 | -8.615850e-47 |
| Msa0261010 | Msa0336450 | 0.874835 | 4.949136e-68 | -8.615850e-47 |
| Msa0269470 | Msa0336450 | 0.811253 | 7.680125e-51 | -8.615850e-47 |
| Msa0274720 | Msa0336450 | 0.854241 | 1.403710e-61 | -8.615850e-47 |
| Msa0274970 | Msa0336450 | 0.807183 | 5.723245e-50 | -8.615850e-47 |
| Msa0281530 | Msa0336450 | 0.812707 | 3.701715e-51 | -8.615850e-47 |
| Msa0283420 | Msa0336450 | 0.823224 | 1.554189e-53 | -8.615850e-47 |
| Msa0284180 | Msa0336450 | 0.844695 | 6.446404e-59 | -8.615850e-47 |
| Msa0285330 | Msa0336450 | 0.811966 | 5.375095e-51 | -8.615850e-47 |
| Msa0288010 | Msa0336450 | -0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa0296790 | Msa0336450 | 0.851439 | 8.866229e-61 | -8.615850e-47 |
| Msa0300280 | Msa0336450 | 0.803604 | 3.219926e-49 | -8.615850e-47 |
| Msa0315520 | Msa0336450 | 0.857708 | 1.357936e-62 | -8.615850e-47 |
| Msa0315680 | Msa0336450 | 0.809225 | 2.102042e-50 | -8.615850e-47 |
| Msa0321690 | Msa0336450 | 0.826565 | 2.529797e-54 | -8.615850e-47 |
| Msa0336450 | Msa0336540 | 0.973179 | 5.432772e-136 | -8.615850e-47 |
| Msa0336450 | Msa0341480 | 0.810142 | 1.335271e-50 | -8.615850e-47 |
| Msa0336450 | Msa0363640 | 0.823372 | 1.434797e-53 | -8.615850e-47 |
| Msa0336450 | Msa0377290 | 0.810793 | 9.659702e-51 | -8.615850e-47 |
| Msa0336450 | Msa0377820 | 0.858821 | 6.330507e-63 | -8.615850e-47 |
| Msa0336450 | Msa0382310 | 0.814969 | 1.174878e-51 | -8.615850e-47 |
| Msa0336450 | Msa0385500 | 0.861319 | 1.115590e-63 | -8.615850e-47 |
| Msa0336450 | Msa0395980 | 0.808879 | 2.493488e-50 | -8.615850e-47 |
| Msa0336450 | Msa0419720 | 0.801973 | 6.992599e-49 | -8.615850e-47 |
| Msa0336450 | Msa0426580 | 0.869433 | 3.107074e-66 | -8.615850e-47 |
| Msa0336450 | Msa0431210 | 0.800823 | 1.202747e-48 | -8.615850e-47 |
| Msa0336450 | Msa0439960 | 0.852052 | 5.946099e-61 | -8.615850e-47 |
| Msa0336450 | Msa0440510 | 0.822009 | 2.979699e-53 | -8.615850e-47 |
| Msa0336450 | Msa0462600 | 0.800727 | 1.258087e-48 | -8.615850e-47 |
| Msa0336450 | Msa0472930 | 0.855424 | 6.366441e-62 | -8.615850e-47 |
| Msa0336450 | Msa0482040 | 0.815490 | 9.003539e-52 | -8.615850e-47 |
| Msa0336450 | Msa0482940 | 0.802511 | 5.419449e-49 | -8.615850e-47 |
| Msa0336450 | Msa0491000 | 0.828788 | 7.398536e-55 | -8.615850e-47 |
| Msa0336450 | Msa0517590 | 0.849786 | 2.585927e-60 | -8.615850e-47 |
| Msa0336450 | Msa0520270 | 0.808318 | 3.284739e-50 | -8.615850e-47 |
| Msa0336450 | Msa0526020 | 0.821854 | 3.236285e-53 | -8.615850e-47 |
| Msa0336450 | Msa0527540 | 0.847926 | 8.490196e-60 | -8.615850e-47 |
| Msa0336450 | Msa0534980 | 0.803512 | 3.364811e-49 | -8.615850e-47 |
| Msa0336450 | Msa0542560 | 0.821369 | 4.189018e-53 | -8.615850e-47 |
| Msa0336450 | Msa0549450 | 0.837258 | 5.779767e-57 | -8.615850e-47 |
| Msa0336450 | Msa0549950 | 0.814994 | 1.160398e-51 | -8.615850e-47 |
| Msa0336450 | Msa0600450 | 0.815457 | 9.155883e-52 | -8.615850e-47 |
| Msa0336450 | Msa0604290 | 0.806663 | 7.372960e-50 | -8.615850e-47 |
| Msa0336450 | Msa0606080 | 0.810248 | 1.266795e-50 | -8.615850e-47 |
| Msa0336450 | Msa0610250 | 0.846956 | 1.567999e-59 | -8.615850e-47 |
| Msa0336450 | Msa0610550 | 0.829588 | 4.733285e-55 | -8.615850e-47 |
| Msa0336450 | Msa0618950 | 0.800154 | 1.646078e-48 | -8.615850e-47 |
| Msa0336450 | Msa0622120 | 0.814370 | 1.594967e-51 | -8.615850e-47 |
| Msa0336450 | Msa0622790 | 0.955303 | 4.135715e-113 | -8.615850e-47 |
| Msa0336450 | Msa0624060 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0336450 | Msa0628420 | 0.810085 | 1.373353e-50 | -8.615850e-47 |
| Msa0336450 | Msa0640940 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0336450 | Msa0646020 | 0.811578 | 6.528436e-51 | -8.615850e-47 |
| Msa0336450 | Msa0646420 | 0.818863 | 1.569800e-52 | -8.615850e-47 |
| Msa0336450 | Msa0646470 | 0.816347 | 5.794725e-52 | -8.615850e-47 |
| Msa0336450 | Msa0651560 | 0.820807 | 5.642994e-53 | -8.615850e-47 |
| Msa0336450 | Msa0658970 | 0.808526 | 2.965966e-50 | -8.615850e-47 |
| Msa0336450 | Msa0662220 | 0.821201 | 4.578999e-53 | -8.615850e-47 |
| Msa0336450 | Msa0679360 | 0.818114 | 2.320456e-52 | -8.615850e-47 |
| Msa0336450 | Msa0689440 | 0.833192 | 6.139839e-56 | -8.615850e-47 |
| Msa0336450 | Msa0690310 | 0.802387 | 5.746311e-49 | -8.615850e-47 |
| Msa0336450 | Msa0693210 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa0336450 | Msa0703440 | 0.800774 | 1.230838e-48 | -8.615850e-47 |
| Msa0336450 | Msa0705010 | 0.833448 | 5.301975e-56 | -8.615850e-47 |
| Msa0336450 | Msa0746170 | 0.803847 | 2.867051e-49 | -8.615850e-47 |
| Msa0336450 | Msa0746210 | 0.803448 | 3.469568e-49 | -8.615850e-47 |
| Msa0336450 | Msa0752700 | 0.837176 | 6.065315e-57 | -8.615850e-47 |
| Msa0336450 | Msa0794970 | 0.826667 | 2.391932e-54 | -8.615850e-47 |
| Msa0336450 | Msa0825610 | 0.807701 | 4.444700e-50 | -8.615850e-47 |
| Msa0336450 | Msa0828590 | 0.809408 | 1.920767e-50 | -8.615850e-47 |
| Msa0336450 | Msa0829220 | 0.811390 | 7.170891e-51 | -8.615850e-47 |
| Msa0336450 | Msa0831100 | 0.840651 | 7.647825e-58 | -8.615850e-47 |
| Msa0336450 | Msa0844280 | 0.805945 | 1.044503e-49 | -8.615850e-47 |
| Msa0336450 | Msa0876950 | 0.805248 | 1.463034e-49 | -8.615850e-47 |
| Msa0336450 | Msa0910960 | 0.803259 | 3.796713e-49 | -8.615850e-47 |
| Msa0336450 | Msa0958000 | 0.801741 | 7.802523e-49 | -8.615850e-47 |
| Msa0336450 | Msa0959520 | 0.805239 | 1.469510e-49 | -8.615850e-47 |
| Msa0336450 | Msa0980540 | 0.838108 | 3.497325e-57 | -8.615850e-47 |
| Msa0336450 | Msa0985180 | 0.823760 | 1.164205e-53 | -8.615850e-47 |
| Msa0336450 | Msa0985220 | 0.806768 | 7.007487e-50 | -8.615850e-47 |
| Msa0336450 | Msa0992510 | 0.800040 | 1.736812e-48 | -8.615850e-47 |
| Msa0336450 | Msa1007290 | 0.847729 | 9.617127e-60 | -8.615850e-47 |
| Msa0336450 | Msa1036300 | 0.827691 | 1.360170e-54 | -8.615850e-47 |
| Msa0336450 | Msa1037510 | 0.804905 | 1.725824e-49 | -8.615850e-47 |
| Msa0336450 | Msa1037520 | 0.818045 | 2.405668e-52 | -8.615850e-47 |
| Msa0336450 | Msa1039900 | 0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0336450 | Msa1047760 | 0.809867 | 1.530012e-50 | -8.615850e-47 |
| Msa0336450 | Msa1109780 | -0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0336450 | Msa1123350 | 0.817406 | 3.351975e-52 | -8.615850e-47 |
| Msa0336450 | Msa1128270 | 0.826410 | 2.754300e-54 | -8.615850e-47 |
| Msa0336450 | Msa1128280 | 0.838369 | 2.996236e-57 | -8.615850e-47 |
| Msa0336450 | Msa1130980 | 0.813295 | 2.751315e-51 | -8.615850e-47 |
| Msa0336450 | Msa1133590 | 0.842272 | 2.861657e-58 | -8.615850e-47 |
| Msa0336450 | Msa1165270 | 0.834996 | 2.169425e-56 | -8.615850e-47 |
| Msa0336450 | Msa1175350 | 0.813269 | 2.787831e-51 | -8.615850e-47 |
| Msa0336450 | Msa1178580 | 0.838733 | 2.413302e-57 | -8.615850e-47 |
| Msa0336450 | Msa1191930 | 0.814398 | 1.572629e-51 | -8.615850e-47 |
| Msa0336450 | Msa1206650 | 0.838287 | 3.145414e-57 | -8.615850e-47 |
| Msa0336450 | Msa1218620 | 0.815525 | 8.842278e-52 | -8.615850e-47 |
| Msa0336450 | Msa1228040 | 0.852219 | 5.328602e-61 | -8.615850e-47 |
| Msa0336450 | Msa1233850 | 0.848254 | 6.889484e-60 | -8.615850e-47 |
| Msa0336450 | Msa1235460 | 0.823560 | 1.296914e-53 | -8.615850e-47 |
| Msa0336450 | Msa1258030 | -0.817631 | 2.983913e-52 | -8.615850e-47 |
| Msa0336450 | Msa1276150 | 0.835478 | 1.638996e-56 | -8.615850e-47 |
| Msa0336450 | Msa1292020 | 0.835815 | 1.347279e-56 | -8.615850e-47 |
| Msa0336450 | Msa1298100 | 0.825046 | 5.801795e-54 | -8.615850e-47 |
| Msa0336450 | Msa1304940 | 0.817060 | 4.010576e-52 | -8.615850e-47 |
| Msa0336450 | Msa1307180 | 0.820599 | 6.298920e-53 | -8.615850e-47 |
| Msa0336450 | Msa1308220 | 0.813279 | 2.773664e-51 | -8.615850e-47 |
| Msa0336450 | Msa1315750 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0336450 | Msa1316360 | 0.816496 | 5.367470e-52 | -8.615850e-47 |
| Msa0336450 | Msa1340200 | 0.815750 | 7.878239e-52 | -8.615850e-47 |
| Msa0336450 | Msa1341060 | 0.840905 | 6.559155e-58 | -8.615850e-47 |
| Msa0336450 | Msa1356610 | 0.803347 | 3.640418e-49 | -8.615850e-47 |
| Msa0336450 | Msa1357190 | 0.803268 | 3.780334e-49 | -8.615850e-47 |
| Msa0336450 | Msa1370590 | 0.809814 | 1.570634e-50 | -8.615850e-47 |
| Msa0336450 | Msa1373850 | 0.852155 | 5.557508e-61 | -8.615850e-47 |
| Msa0336450 | Msa1384100 | 0.808814 | 2.573624e-50 | -8.615850e-47 |
| Msa0336450 | Msa1392980 | 0.834687 | 2.594364e-56 | -8.615850e-47 |
| Msa0336450 | Msa1414820 | 0.800978 | 1.118235e-48 | -8.615850e-47 |
| Msa0336450 | Msa1418340 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa0336450 | Msa1433700 | 0.854243 | 1.401361e-61 | -8.615850e-47 |
| Msa0336450 | Msa1444120 | 0.805151 | 1.533310e-49 | -8.615850e-47 |
| Msa0336450 | Msa1458290 | 0.816384 | 5.686706e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336450 | MtrunA17_Chr2g0322911 | 98.540 | 274 | 4 | 0 | 1 | 274 | 1 | 274 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336450 | AT3G21865.1 | 66.667 | 276 | 73 | 3 | 14 | 274 | 11 | 282 | 2.94e-120 | 345 |
Find 96 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAACTGGGTGACAATTTC+GGG | 0.202791 | 2_4:+55861372 | None:intergenic |
| TAATAGGATATTGGTAAAAT+TGG | 0.213521 | 2_4:-55866150 | Msa0336450:five_prime_UTR |
| CATATTATCATGTTTGTAAA+AGG | 0.226181 | 2_4:+55860798 | None:intergenic |
| TATTAGGATATTCGCACTAT+TGG | 0.276091 | 2_4:-55864902 | Msa0336450:intron |
| ATTAGGATATTCGCACTATT+GGG | 0.278336 | 2_4:-55864901 | Msa0336450:intron |
| TGTGTTCAGTGCTCCATCTT+TGG | 0.282234 | 2_4:-55861169 | Msa0336450:CDS |
| ATATCTCATGGACCGGGTTC+TGG | 0.282612 | 2_4:-55863272 | Msa0336450:CDS |
| AGCTAACTGGGTGACAATTT+CGG | 0.307177 | 2_4:+55861371 | None:intergenic |
| TTCATAAGTGTCTACTAGTT+TGG | 0.313088 | 2_4:-55861093 | Msa0336450:three_prime_UTR |
| TATAGTAACATACAGCTAAC+TGG | 0.320691 | 2_4:+55861358 | None:intergenic |
| ATAAGATAAGATAAAATAAT+AGG | 0.325529 | 2_4:-55866166 | None:intergenic |
| CTTTACCTTCAGATGAATTA+CGG | 0.325787 | 2_4:-55864721 | Msa0336450:CDS |
| AAGTAGTCCAGAGGAGCTTC+AGG | 0.337504 | 2_4:-55863447 | Msa0336450:intron |
| CACTTCAGGTGGTTTGGTTA+AGG | 0.348580 | 2_4:-55862418 | Msa0336450:CDS |
| AAGATAAAATAATAGGATAT+TGG | 0.363620 | 2_4:-55866159 | None:intergenic |
| TTTGGTTTGTGTCAGAATCT+TGG | 0.364462 | 2_4:-55861075 | Msa0336450:three_prime_UTR |
| CTCTGTGCTAGAAGTATTGT+TGG | 0.365848 | 2_4:-55863317 | Msa0336450:CDS |
| TAGGTAACCTGTCGTCTTCT+TGG | 0.368682 | 2_4:-55863485 | Msa0336450:CDS |
| GGTATTCACTTCAGGTGGTT+TGG | 0.370599 | 2_4:-55862424 | Msa0336450:CDS |
| CGCACTATTGGGGCGGTAGC+TGG | 0.384057 | 2_4:-55864890 | Msa0336450:CDS |
| TTTACCTTCAGATGAATTAC+GGG | 0.396554 | 2_4:-55864720 | Msa0336450:CDS |
| TGCCTCCCTTGTGTAGGATT+AGG | 0.402644 | 2_4:+55864824 | None:intergenic |
| CAAATTCCGGTGAGGCCTTA+CGG | 0.413571 | 2_4:-55865983 | Msa0336450:five_prime_UTR |
| TTTCACACCTGAAGCTCCTC+TGG | 0.413654 | 2_4:+55863440 | None:intergenic |
| GAAGCAGGGGTATTCACTTC+AGG | 0.423138 | 2_4:-55862432 | Msa0336450:CDS |
| TTTCACCTCATCAAACGCTT+TGG | 0.424379 | 2_4:-55865903 | Msa0336450:CDS |
| TCATCTGTCTCTAGAAAAGC+TGG | 0.427031 | 2_4:+55861025 | None:intergenic |
| GTGATTTATATCTCATGGAC+CGG | 0.427068 | 2_4:-55863279 | Msa0336450:CDS |
| CACAAGGGAGGCAACGGAAA+AGG | 0.435108 | 2_4:-55864814 | Msa0336450:CDS |
| TTCGTCAATTAGAACCAGAT+TGG | 0.438867 | 2_4:-55861410 | Msa0336450:CDS |
| ATAAAACATCATACCTTGAC+TGG | 0.444866 | 2_4:+55864668 | None:intergenic |
| GAGGTGAAAGAGGTCTTGTT+TGG | 0.449964 | 2_4:+55865917 | None:intergenic |
| GTAAAATTGGAAGAGAAACT+TGG | 0.450341 | 2_4:-55866137 | Msa0336450:five_prime_UTR |
| TGGTGAAACATGGCCGTGTC+TGG | 0.450786 | 2_4:-55865960 | Msa0336450:exon |
| TTTGAATTTGTGCTAGCTCC+AGG | 0.451708 | 2_4:+55864770 | None:intergenic |
| ATTCTGTGATTTATATCTCA+TGG | 0.455224 | 2_4:-55863284 | Msa0336450:CDS |
| CTTGTAGCGTTAGAAGAAGC+AGG | 0.455948 | 2_4:-55862447 | Msa0336450:CDS |
| CATTAACAAGTATTGGTTGA+AGG | 0.461894 | 2_4:+55860749 | None:intergenic |
| CTCACTATCTGCCCCAAGGT+TGG | 0.469459 | 2_4:+55864516 | None:intergenic |
| CTTTGATGGGTTCTCACACT+AGG | 0.470411 | 2_4:-55860976 | Msa0336450:three_prime_UTR |
| GGTGGTGCATCTAGTAATCC+TGG | 0.473380 | 2_4:-55864788 | Msa0336450:CDS |
| CTCATAGGCGCAGTTGTTGA+CGG | 0.487364 | 2_4:-55866095 | Msa0336450:five_prime_UTR |
| CTCTTCAGCAGCACTGAGAA+TGG | 0.490260 | 2_4:-55861447 | Msa0336450:CDS |
| GAAGTTGAGTGAAGGAAGAA+AGG | 0.490537 | 2_4:-55864490 | Msa0336450:intron |
| AACCTCTGACGACAGCTCAT+AGG | 0.502156 | 2_4:-55866110 | Msa0336450:five_prime_UTR |
| TTTGTGTCGATATGCCAATC+TGG | 0.503340 | 2_4:+55861396 | None:intergenic |
| GATGGGTTCTCACACTAGGT+TGG | 0.517754 | 2_4:-55860972 | Msa0336450:three_prime_UTR |
| GTGAAAGAGGTCTTGTTTGG+AGG | 0.521964 | 2_4:+55865920 | None:intergenic |
| CCAAAGAAAAGTTCCAAAGA+TGG | 0.522578 | 2_4:+55861156 | None:intergenic |
| TAGAGACAGATGAGAAAACT+AGG | 0.523346 | 2_4:-55861015 | Msa0336450:three_prime_UTR |
| TGTGCCCGTAATTCATCTGA+AGG | 0.526195 | 2_4:+55864716 | None:intergenic |
| CGCCTATGAGCTGTCGTCAG+AGG | 0.532495 | 2_4:+55866108 | None:intergenic |
| TTCCGTTGCCTCCCTTGTGT+AGG | 0.536638 | 2_4:+55864818 | None:intergenic |
| TCATACACGTGCACAGAAGC+AGG | 0.536678 | 2_4:+55860942 | None:intergenic |
| GTGAGGCAGAAGTTGAGTGA+AGG | 0.552513 | 2_4:-55864498 | Msa0336450:CDS |
| GGCCTTACGGTGGTGAAACA+TGG | 0.555565 | 2_4:-55865970 | Msa0336450:exon |
| AGCGTTTGATGAGGTGAAAG+AGG | 0.557278 | 2_4:+55865907 | None:intergenic |
| ATCCTACACAAGGGAGGCAA+CGG | 0.560083 | 2_4:-55864820 | Msa0336450:CDS |
| CGCTTTCGTCATCCAGAACC+CGG | 0.561411 | 2_4:+55863260 | None:intergenic |
| AACAAGTATTGGTTGAAGGA+TGG | 0.564014 | 2_4:+55860753 | None:intergenic |
| AGGTGGTTTGGTTAAGGACA+AGG | 0.566844 | 2_4:-55862412 | Msa0336450:intron |
| GGGAGGCAACGGAAAAGGCA+AGG | 0.578364 | 2_4:-55864809 | Msa0336450:CDS |
| TCACCACCGTAAGGCCTCAC+CGG | 0.578554 | 2_4:+55865977 | None:intergenic |
| TTAGGATATTCGCACTATTG+GGG | 0.584747 | 2_4:-55864900 | Msa0336450:intron |
| CAACCTTGGGGCAGATAGTG+AGG | 0.591229 | 2_4:-55864515 | Msa0336450:CDS |
| GGCCATGTTTCACCACCGTA+AGG | 0.591533 | 2_4:+55865968 | None:intergenic |
| ATCGTTGTCACCACCAGACA+CGG | 0.593071 | 2_4:+55865947 | None:intergenic |
| CTGCCTCACTATCTGCCCCA+AGG | 0.597162 | 2_4:+55864512 | None:intergenic |
| TGAGTTCTTTCAGCCAGTCA+AGG | 0.598134 | 2_4:-55864681 | Msa0336450:intron |
| TTGTAGCGTTAGAAGAAGCA+GGG | 0.599376 | 2_4:-55862446 | Msa0336450:CDS |
| GCAGGGGTATTCACTTCAGG+TGG | 0.601629 | 2_4:-55862429 | Msa0336450:CDS |
| TGATTTATATCTCATGGACC+GGG | 0.604687 | 2_4:-55863278 | Msa0336450:CDS |
| GATCACTCCAAGAAGACGAC+AGG | 0.606234 | 2_4:+55863478 | None:intergenic |
| TAGCACAAATTCAAATGCGT+CGG | 0.610167 | 2_4:-55864762 | Msa0336450:CDS |
| ATAGTAACATACAGCTAACT+GGG | 0.617813 | 2_4:+55861359 | None:intergenic |
| GAAGGTAAAGAAGCATCAGA+AGG | 0.624200 | 2_4:+55864734 | None:intergenic |
| CCTCTGGACTACTTTCCTCA+AGG | 0.629211 | 2_4:+55863456 | None:intergenic |
| TGAAACATGGCCGTGTCTGG+TGG | 0.631096 | 2_4:-55865957 | Msa0336450:exon |
| TGGAGCACTGAACACATTAG+CGG | 0.631948 | 2_4:+55861176 | None:intergenic |
| CATCTGTCTCTAGAAAAGCT+GGG | 0.635551 | 2_4:+55861026 | None:intergenic |
| CAGTTGTTGACGGCAAACCA+CGG | 0.642833 | 2_4:-55866085 | Msa0336450:five_prime_UTR |
| AAGCACCAAAGCGTTTGATG+AGG | 0.654478 | 2_4:+55865898 | None:intergenic |
| CCTTGAGGAAAGTAGTCCAG+AGG | 0.659450 | 2_4:-55863456 | Msa0336450:CDS |
| TCTTTGTTCAAATTCCGGTG+AGG | 0.659503 | 2_4:-55865991 | Msa0336450:five_prime_UTR |
| CTCCTAATCCTACACAAGGG+AGG | 0.662029 | 2_4:-55864826 | Msa0336450:CDS |
| AGATCTCCTAATCCTACACA+AGG | 0.662631 | 2_4:-55864830 | Msa0336450:CDS |
| GGATATTCGCACTATTGGGG+CGG | 0.668267 | 2_4:-55864897 | Msa0336450:CDS |
| AGGCAACGGAAAAGGCAAGG+TGG | 0.677448 | 2_4:-55864806 | Msa0336450:CDS |
| TTGTATTGTTTGTGTCTCCG+TGG | 0.680557 | 2_4:+55866068 | None:intergenic |
| GGTTCTGGATGACGAAAGCG+AGG | 0.681958 | 2_4:-55863257 | Msa0336450:intron |
| TCTTCTTGGAGTGATCCTTG+AGG | 0.683304 | 2_4:-55863471 | Msa0336450:CDS |
| TGTAGCGTTAGAAGAAGCAG+GGG | 0.684444 | 2_4:-55862445 | Msa0336450:CDS |
| CAACAATACTTCTAGCACAG+AGG | 0.703729 | 2_4:+55863318 | None:intergenic |
| AACATGATAATATGTCATCG+TGG | 0.720893 | 2_4:-55860789 | Msa0336450:three_prime_UTR |
| ATTCCGGTGAGGCCTTACGG+TGG | 0.729776 | 2_4:-55865980 | Msa0336450:five_prime_UTR |
| GATCTCCTAATCCTACACAA+GGG | 0.732816 | 2_4:-55864829 | Msa0336450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAGAAACTTTAAA+TGG | - | chr2_4:55861274-55861293 | Msa0336450:intron | 10.0% |
| !!! | TTTTTTTAGAAACTTTAAAT+GGG | - | chr2_4:55861275-55861294 | Msa0336450:intron | 10.0% |
| !!! | TTAAATTTTTAATCTACTTA+AGG | - | chr2_4:55862568-55862587 | Msa0336450:intron | 10.0% |
| !!! | TATTTTTTGTGATATATGAT+TGG | - | chr2_4:55861125-55861144 | Msa0336450:three_prime_UTR | 15.0% |
| !!! | TGAAATTTTGATATTTTTGA+TGG | - | chr2_4:55861169-55861188 | Msa0336450:CDS | 15.0% |
| !!! | TTTTTTTTTGCTTTTAATGT+TGG | - | chr2_4:55861298-55861317 | Msa0336450:intron | 15.0% |
| !!! | TTTTTTTTGCTTTTAATGTT+GGG | - | chr2_4:55861299-55861318 | Msa0336450:intron | 15.0% |
| !! | AAACTATAAGAGAAAATATT+AGG | - | chr2_4:55861752-55861771 | Msa0336450:intron | 15.0% |
| !! | AAGATAGACAATAAAAAAAT+GGG | + | chr2_4:55863174-55863193 | None:intergenic | 15.0% |
| !! | TAAGATAGACAATAAAAAAA+TGG | + | chr2_4:55863175-55863194 | None:intergenic | 15.0% |
| !!! | AATTTTACATTAACAAGTAT+TGG | + | chr2_4:55866145-55866164 | None:intergenic | 15.0% |
| !! | TAATAGGATATTGGTAAAAT+TGG | - | chr2_4:55860734-55860753 | Msa0336450:three_prime_UTR | 20.0% |
| !!! | TGATATTTTTGATGGATTTT+TGG | - | chr2_4:55861177-55861196 | Msa0336450:CDS | 20.0% |
| !! | ATCATTCAATCAACAATAAA+GGG | + | chr2_4:55861206-55861225 | None:intergenic | 20.0% |
| !! | AATCATTCAATCAACAATAA+AGG | + | chr2_4:55861207-55861226 | None:intergenic | 20.0% |
| !!! | TTATTGTTGATTGAATGATT+AGG | - | chr2_4:55861207-55861226 | Msa0336450:CDS | 20.0% |
| !! | ACCTACTATGTATTTAAATA+AGG | - | chr2_4:55861391-55861410 | Msa0336450:CDS | 20.0% |
| !!! | ACCTTATTTAAATACATAGT+AGG | + | chr2_4:55861395-55861414 | None:intergenic | 20.0% |
| !! | CTATGTATTTAAATAAGGTA+TGG | - | chr2_4:55861396-55861415 | Msa0336450:CDS | 20.0% |
| !!! | AAATGATCAATGTAATGTTT+TGG | - | chr2_4:55861436-55861455 | Msa0336450:CDS | 20.0% |
| !!! | TAATGTTTTGGTCTTTTTTT+TGG | - | chr2_4:55861448-55861467 | Msa0336450:CDS | 20.0% |
| !!! | ATTTTCTCTTATAGTTTTTC+AGG | + | chr2_4:55861749-55861768 | None:intergenic | 20.0% |
| !!! | ATGATATTGTACTTGTTATT+AGG | - | chr2_4:55861966-55861985 | Msa0336450:intron | 20.0% |
| !! | AAAGCTATAAAAAAATACAG+CGG | + | chr2_4:55862312-55862331 | None:intergenic | 20.0% |
| !!! | AAATTTAAACTCTAAGACAA+TGG | + | chr2_4:55862556-55862575 | None:intergenic | 20.0% |
| !! | TAATCTATAAAGCTATAAAC+AGG | + | chr2_4:55862620-55862639 | None:intergenic | 20.0% |
| !! | AATAAGAATCTCATTACTTT+AGG | - | chr2_4:55862825-55862844 | Msa0336450:intron | 20.0% |
| !! | ATAAGAATCTCATTACTTTA+GGG | - | chr2_4:55862826-55862845 | Msa0336450:intron | 20.0% |
| !! | AGTTATTTATTTAAAAGCGA+AGG | - | chr2_4:55862887-55862906 | Msa0336450:intron | 20.0% |
| !! | TTATTGTCTATCTTAATAAG+TGG | - | chr2_4:55863180-55863199 | Msa0336450:intron | 20.0% |
| !!! | ATAAAACAAAAGTATACGAA+AGG | + | chr2_4:55863474-55863493 | None:intergenic | 20.0% |
| !! | ATATTCGTAACATTGAAAAA+TGG | + | chr2_4:55863754-55863773 | None:intergenic | 20.0% |
| !!! | TTCATTTTTACAGAATCATT+CGG | + | chr2_4:55863787-55863806 | None:intergenic | 20.0% |
| !! | ATTTCATATTCTGAATCTTA+GGG | + | chr2_4:55863848-55863867 | None:intergenic | 20.0% |
| !! | AATTTCATATTCTGAATCTT+AGG | + | chr2_4:55863849-55863868 | None:intergenic | 20.0% |
| !! | TCACAAAAGTTGTTTAAAAA+TGG | + | chr2_4:55863922-55863941 | None:intergenic | 20.0% |
| !!! | TCACAAAAGTTGTTTAAAAT+TGG | - | chr2_4:55864107-55864126 | Msa0336450:intron | 20.0% |
| !!! | TATCATTCCTCTTTTTTTTT+AGG | - | chr2_4:55864138-55864157 | Msa0336450:intron | 20.0% |
| !!! | ATCATTCCTCTTTTTTTTTA+GGG | - | chr2_4:55864139-55864158 | Msa0336450:intron | 20.0% |
| !! | TTACATTCTATCTTTATGTA+TGG | - | chr2_4:55864392-55864411 | Msa0336450:intron | 20.0% |
| !!! | TCTAAAGGTAATCTTTAAAA+TGG | + | chr2_4:55864782-55864801 | None:intergenic | 20.0% |
| !! | CAATAATTAGATAAGAGTAA+AGG | + | chr2_4:55864810-55864829 | None:intergenic | 20.0% |
| !! | TAGAATCTATATATTTGTGA+AGG | - | chr2_4:55865024-55865043 | Msa0336450:intron | 20.0% |
| !! | ATTAGAAAGAAACAATGATA+TGG | + | chr2_4:55865612-55865631 | None:intergenic | 20.0% |
| !!! | ATTCACAATTTTCAAACAAA+AGG | + | chr2_4:55866007-55866026 | None:intergenic | 20.0% |
| !! | CATATTATCATGTTTGTAAA+AGG | + | chr2_4:55866089-55866108 | None:intergenic | 20.0% |
| !! | TGTTTTCTTTGTTCAAATTC+CGG | - | chr2_4:55860888-55860907 | Msa0336450:three_prime_UTR | 25.0% |
| !!! | ACCTTTTTTCATCATTCTAT+TGG | - | chr2_4:55861070-55861089 | Msa0336450:three_prime_UTR | 25.0% |
| ! | TCCAATAGAATGATGAAAAA+AGG | + | chr2_4:55861074-55861093 | None:intergenic | 25.0% |
| ! | AAAACAAACTTTCACTCTTT+AGG | + | chr2_4:55861256-55861275 | None:intergenic | 25.0% |
| ! | AAATAAGGTATGGTTTAAGT+TGG | - | chr2_4:55861406-55861425 | Msa0336450:CDS | 25.0% |
| ! | GACTTGTAGATTATGTATTA+AGG | - | chr2_4:55861675-55861694 | Msa0336450:intron | 25.0% |
| ! | GTATATGATATAGAACATGA+TGG | - | chr2_4:55861811-55861830 | Msa0336450:intron | 25.0% |
| ! | AATTCTGAATCATTAAGCAA+AGG | + | chr2_4:55862257-55862276 | None:intergenic | 25.0% |
| ! | AATAACCATAAAACTAAGTC+TGG | + | chr2_4:55862470-55862489 | None:intergenic | 25.0% |
| !!! | ATCATAAGAAATGTCGATTT+GGG | - | chr2_4:55862524-55862543 | Msa0336450:intron | 25.0% |
| ! | AAGGTTAAATTAACATGTCA+TGG | - | chr2_4:55862587-55862606 | Msa0336450:intron | 25.0% |
| ! | TAAGAATCTCATTACTTTAG+GGG | - | chr2_4:55862827-55862846 | Msa0336450:intron | 25.0% |
| ! | CTATGTTTATGTTTCTCTTT+AGG | - | chr2_4:55862940-55862959 | Msa0336450:intron | 25.0% |
| !! | TATGTTTCTCTTTAGGTTAA+AGG | - | chr2_4:55862947-55862966 | Msa0336450:intron | 25.0% |
| ! | CAAAAGTAGAAAAATTGTCT+TGG | + | chr2_4:55863112-55863131 | None:intergenic | 25.0% |
| !! | CAAGACAATTTTTCTACTTT+TGG | - | chr2_4:55863110-55863129 | Msa0336450:intron | 25.0% |
| ! | ATTCTGTGATTTATATCTCA+TGG | - | chr2_4:55863600-55863619 | Msa0336450:intron | 25.0% |
| ! | CATGATGAGTGATTAATATA+TGG | + | chr2_4:55863669-55863688 | None:intergenic | 25.0% |
| ! | ATGATTCTGTAAAAATGAAC+TGG | - | chr2_4:55863788-55863807 | Msa0336450:intron | 25.0% |
| ! | TGATTCTGTAAAAATGAACT+GGG | - | chr2_4:55863789-55863808 | Msa0336450:intron | 25.0% |
| !! | ATCTTAGGGTAAGATATTTT+TGG | + | chr2_4:55863834-55863853 | None:intergenic | 25.0% |
| ! | ATTTCTCCCTAAAAAAAAAG+AGG | + | chr2_4:55864148-55864167 | None:intergenic | 25.0% |
| !! | TTTATGATCTTTTCCTAGTT+TGG | - | chr2_4:55864211-55864230 | Msa0336450:intron | 25.0% |
| ! | AGAAAAAAACACAATGTTTG+AGG | + | chr2_4:55864515-55864534 | None:intergenic | 25.0% |
| ! | TAGAATTTAATTACCATGCA+AGG | - | chr2_4:55864948-55864967 | Msa0336450:intron | 25.0% |
| ! | ATAGATTCTAGATTCTAGAT+AGG | + | chr2_4:55865014-55865033 | None:intergenic | 25.0% |
| !! | ATTCCAATCATATTTTACCA+TGG | + | chr2_4:55865080-55865099 | None:intergenic | 25.0% |
| ! | TGAGATGTTACAAATTTAGA+TGG | - | chr2_4:55865250-55865269 | Msa0336450:intron | 25.0% |
| ! | TATCAAAATAGAGGACAAAA+AGG | + | chr2_4:55865396-55865415 | None:intergenic | 25.0% |
| !!! | ATGTGATTAGTAGTGTTTTT+TGG | + | chr2_4:55865767-55865786 | None:intergenic | 25.0% |
| GTAAAATTGGAAGAGAAACT+TGG | - | chr2_4:55860747-55860766 | Msa0336450:three_prime_UTR | 30.0% | |
| !!! | GCTTTTGTTACTTTCAAGAT+CGG | - | chr2_4:55861005-55861024 | Msa0336450:three_prime_UTR | 30.0% |
| ! | AAATGAGCTTTTATGTGTCA+TGG | - | chr2_4:55861341-55861360 | Msa0336450:intron | 30.0% |
| ! | TGTCATGGTTTTTGTCAAAT+TGG | - | chr2_4:55861356-55861375 | Msa0336450:intron | 30.0% |
| ! | GTCATGGTTTTTGTCAAATT+GGG | - | chr2_4:55861357-55861376 | Msa0336450:intron | 30.0% |
| ! | TCATGGTTTTTGTCAAATTG+GGG | - | chr2_4:55861358-55861377 | Msa0336450:intron | 30.0% |
| !!! | TTTTGGAGCATGTGTAAATA+AGG | - | chr2_4:55861465-55861484 | Msa0336450:intron | 30.0% |
| AACAACATTAAAGAGAGAGT+TGG | - | chr2_4:55861582-55861601 | Msa0336450:intron | 30.0% | |
| ACAACATTAAAGAGAGAGTT+GGG | - | chr2_4:55861583-55861602 | Msa0336450:intron | 30.0% | |
| ATTAAGGAGAGTAGATTAGA+TGG | - | chr2_4:55861691-55861710 | Msa0336450:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr2_4:55861777-55861796 | Msa0336450:intron | 30.0% | |
| ! | TAATGAGTTGGATCGAAATA+TGG | - | chr2_4:55861789-55861808 | Msa0336450:intron | 30.0% |
| AAGTACAATATCATGAGCTT+TGG | + | chr2_4:55861960-55861979 | None:intergenic | 30.0% | |
| TATTAGGATATTCGCACTAT+TGG | - | chr2_4:55861982-55862001 | Msa0336450:intron | 30.0% | |
| ATTAGGATATTCGCACTATT+GGG | - | chr2_4:55861983-55862002 | Msa0336450:intron | 30.0% | |
| CTTTACCTTCAGATGAATTA+CGG | - | chr2_4:55862163-55862182 | Msa0336450:intron | 30.0% | |
| TTTACCTTCAGATGAATTAC+GGG | - | chr2_4:55862164-55862183 | Msa0336450:intron | 30.0% | |
| ATAAAACATCATACCTTGAC+TGG | + | chr2_4:55862219-55862238 | None:intergenic | 30.0% | |
| ATCATTAAGCAAAGGAAAGT+GGG | + | chr2_4:55862249-55862268 | None:intergenic | 30.0% | |
| AATCATTAAGCAAAGGAAAG+TGG | + | chr2_4:55862250-55862269 | None:intergenic | 30.0% | |
| ! | GATCATAAGAAATGTCGATT+TGG | - | chr2_4:55862523-55862542 | Msa0336450:intron | 30.0% |
| !! | TTTAAACTCTAAGACAATGG+TGG | + | chr2_4:55862553-55862572 | None:intergenic | 30.0% |
| CACACACTTCGTATTTATAA+TGG | + | chr2_4:55862744-55862763 | None:intergenic | 30.0% | |
| !!! | CATAGCTTGTATTTTAAAGC+TGG | + | chr2_4:55862925-55862944 | None:intergenic | 30.0% |
| ACTTATTGGTCATAATAGCT+GGG | + | chr2_4:55863373-55863392 | None:intergenic | 30.0% | |
| AACTTATTGGTCATAATAGC+TGG | + | chr2_4:55863374-55863393 | None:intergenic | 30.0% | |
| ATGACCAATAAGTTGTATGT+AGG | - | chr2_4:55863380-55863399 | Msa0336450:intron | 30.0% | |
| GTTACCTACATACAACTTAT+TGG | + | chr2_4:55863387-55863406 | None:intergenic | 30.0% | |
| GTCTTATGTAATGAACTTGA+TGG | - | chr2_4:55863688-55863707 | Msa0336450:intron | 30.0% | |
| TGTAAAAATGAACTGGGATA+TGG | - | chr2_4:55863795-55863814 | Msa0336450:intron | 30.0% | |
| !!! | CTTTTTTCGTCTCTTCTTAT+TGG | + | chr2_4:55864083-55864102 | None:intergenic | 30.0% |
| TTCGAACTAAATTTGATCTC+AGG | - | chr2_4:55864318-55864337 | Msa0336450:intron | 30.0% | |
| !! | ATGGTGTCGTGTTATAATAT+TGG | + | chr2_4:55865061-55865080 | None:intergenic | 30.0% |
| AATATTATAACACGACACCA+TGG | - | chr2_4:55865060-55865079 | Msa0336450:intron | 30.0% | |
| ACACCATGGTAAAATATGAT+TGG | - | chr2_4:55865074-55865093 | Msa0336450:intron | 30.0% | |
| GTATAAAAAAAGTAGTGCAC+AGG | + | chr2_4:55865103-55865122 | None:intergenic | 30.0% | |
| !!! | GTGCACTACTTTTTTTATAC+TGG | - | chr2_4:55865103-55865122 | Msa0336450:intron | 30.0% |
| AAACATAAGTATGCAGCAAT+CGG | + | chr2_4:55865365-55865384 | None:intergenic | 30.0% | |
| ATAGTAACATACAGCTAACT+GGG | + | chr2_4:55865528-55865547 | None:intergenic | 30.0% | |
| TATAGTAACATACAGCTAAC+TGG | + | chr2_4:55865529-55865548 | None:intergenic | 30.0% | |
| TTCATAAGTGTCTACTAGTT+TGG | - | chr2_4:55865791-55865810 | Msa0336450:intron | 30.0% | |
| AAAAGCTGGGAAAAAATGTA+TGG | + | chr2_4:55865848-55865867 | None:intergenic | 30.0% | |
| !! | AGATTTTCTTCAAGCTTTGA+TGG | - | chr2_4:55865894-55865913 | Msa0336450:CDS | 30.0% |
| !! | GATTTTCTTCAAGCTTTGAT+GGG | - | chr2_4:55865895-55865914 | Msa0336450:CDS | 30.0% |
| AACATGATAATATGTCATCG+TGG | - | chr2_4:55866095-55866114 | Msa0336450:five_prime_UTR | 30.0% | |
| !! | CATTAACAAGTATTGGTTGA+AGG | + | chr2_4:55866138-55866157 | None:intergenic | 30.0% |
| TGATTGAATGATTAGGAACC+AGG | - | chr2_4:55861214-55861233 | Msa0336450:CDS | 35.0% | |
| GATTGAATGATTAGGAACCA+GGG | - | chr2_4:55861215-55861234 | Msa0336450:CDS | 35.0% | |
| !! | TTTGCTTTTAATGTTGGGTG+TGG | - | chr2_4:55861304-55861323 | Msa0336450:intron | 35.0% |
| !! | TTGCTTTTAATGTTGGGTGT+GGG | - | chr2_4:55861305-55861324 | Msa0336450:intron | 35.0% |
| CAACATTAAAGAGAGAGTTG+GGG | - | chr2_4:55861584-55861603 | Msa0336450:intron | 35.0% | |
| TTAGGATATTCGCACTATTG+GGG | - | chr2_4:55861984-55862003 | Msa0336450:intron | 35.0% | |
| TAGCACAAATTCAAATGCGT+CGG | - | chr2_4:55862122-55862141 | Msa0336450:intron | 35.0% | |
| ATCCACAAACATTCATGCAT+TGG | + | chr2_4:55862283-55862302 | None:intergenic | 35.0% | |
| !!! | TGAATTTTTTCAGCCAACCT+TGG | - | chr2_4:55862355-55862374 | Msa0336450:intron | 35.0% |
| !!! | GAATTTTTTCAGCCAACCTT+GGG | - | chr2_4:55862356-55862375 | Msa0336450:intron | 35.0% |
| !!! | AATTTTTTCAGCCAACCTTG+GGG | - | chr2_4:55862357-55862376 | Msa0336450:intron | 35.0% |
| ATGCACTCTTTATGTAGTAG+TGG | - | chr2_4:55862436-55862455 | Msa0336450:CDS | 35.0% | |
| !!! | GTGTTCCAGACTTAGTTTTA+TGG | - | chr2_4:55862462-55862481 | Msa0336450:intron | 35.0% |
| ! | AGGAGATGGTAATTTCTAGA+AGG | + | chr2_4:55862501-55862520 | None:intergenic | 35.0% |
| ! | TAATTAGTAAGCACTAGCCT+AGG | + | chr2_4:55862696-55862715 | None:intergenic | 35.0% |
| ATTGGTTAAGCAGCTAAAAG+AGG | - | chr2_4:55863027-55863046 | Msa0336450:intron | 35.0% | |
| CGATATAGTTGCGTATAAAC+TGG | - | chr2_4:55863266-55863285 | Msa0336450:CDS | 35.0% | |
| ATAGTTGCGTATAAACTGGA+TGG | - | chr2_4:55863270-55863289 | Msa0336450:CDS | 35.0% | |
| TAGTTGCGTATAAACTGGAT+GGG | - | chr2_4:55863271-55863290 | Msa0336450:CDS | 35.0% | |
| TCATAATAGCTGGGAAACAT+AGG | + | chr2_4:55863364-55863383 | None:intergenic | 35.0% | |
| GTGATTTATATCTCATGGAC+CGG | - | chr2_4:55863605-55863624 | Msa0336450:intron | 35.0% | |
| TGATTTATATCTCATGGACC+GGG | - | chr2_4:55863606-55863625 | Msa0336450:intron | 35.0% | |
| TGTAAACTACAGCACACAAA+AGG | + | chr2_4:55864633-55864652 | None:intergenic | 35.0% | |
| TTTGACTGTGAACATTTGCA+CGG | - | chr2_4:55864715-55864734 | Msa0336450:CDS | 35.0% | |
| AATGGCAAAAGATGTTTCTC+AGG | + | chr2_4:55864764-55864783 | None:intergenic | 35.0% | |
| AGAGTAAAGGTTCTCTCTAA+AGG | + | chr2_4:55864797-55864816 | None:intergenic | 35.0% | |
| AATAAACCGTCATCATGACT+AGG | - | chr2_4:55864898-55864917 | Msa0336450:CDS | 35.0% | |
| ATAAACCGTCATCATGACTA+GGG | - | chr2_4:55864899-55864918 | Msa0336450:CDS | 35.0% | |
| ! | ATATGTTTGTTGCCATTTGC+TGG | - | chr2_4:55865155-55865174 | Msa0336450:intron | 35.0% |
| !!! | CATCAGAATTTTAGGTTCCA+AGG | + | chr2_4:55865205-55865224 | None:intergenic | 35.0% |
| TGACAAGATATAACTCTTGC+AGG | + | chr2_4:55865228-55865247 | None:intergenic | 35.0% | |
| ! | GCTACAGATCACAATTTTGT+CGG | + | chr2_4:55865287-55865306 | None:intergenic | 35.0% |
| GGTATGGGATATCAAAATAG+AGG | + | chr2_4:55865405-55865424 | None:intergenic | 35.0% | |
| TTCGTCAATTAGAACCAGAT+TGG | - | chr2_4:55865474-55865493 | Msa0336450:intron | 35.0% | |
| AACAACAAATCATGTTGCAG+AGG | - | chr2_4:55865636-55865655 | Msa0336450:intron | 35.0% | |
| ! | GCAGTTCGTTCTGTTTTATA+AGG | + | chr2_4:55865689-55865708 | None:intergenic | 35.0% |
| CCAAAGAAAAGTTCCAAAGA+TGG | + | chr2_4:55865731-55865750 | None:intergenic | 35.0% | |
| !!! | CCATCTTTGGAACTTTTCTT+TGG | - | chr2_4:55865728-55865747 | Msa0336450:intron | 35.0% |
| !!! | AGTGTTTTTTGGTTCTCATG+TGG | + | chr2_4:55865756-55865775 | None:intergenic | 35.0% |
| !! | TTTGGTTTGTGTCAGAATCT+TGG | - | chr2_4:55865809-55865828 | Msa0336450:intron | 35.0% |
| GGGAAAAAATGTATGGTGAA+AGG | + | chr2_4:55865841-55865860 | None:intergenic | 35.0% | |
| TAGAGACAGATGAGAAAACT+AGG | - | chr2_4:55865869-55865888 | Msa0336450:CDS | 35.0% | |
| ! | TCAGACATTTTGAACTGACA+AGG | - | chr2_4:55866032-55866051 | Msa0336450:five_prime_UTR | 35.0% |
| !! | AACAAGTATTGGTTGAAGGA+TGG | + | chr2_4:55866134-55866153 | None:intergenic | 35.0% |
| TTGTATTGTTTGTGTCTCCG+TGG | + | chr2_4:55860819-55860838 | None:intergenic | 40.0% | |
| TCTTTGTTCAAATTCCGGTG+AGG | - | chr2_4:55860893-55860912 | Msa0336450:three_prime_UTR | 40.0% | |
| TTTCACCTCATCAAACGCTT+TGG | - | chr2_4:55860981-55861000 | Msa0336450:three_prime_UTR | 40.0% | |
| GGTTGTTAATTATCCAACCC+TGG | + | chr2_4:55861235-55861254 | None:intergenic | 40.0% | |
| AGGAGAGTAGATTAGATGGA+AGG | - | chr2_4:55861695-55861714 | Msa0336450:intron | 40.0% | |
| !! | ACTAAGTGGGATTAGCTACA+TGG | + | chr2_4:55861848-55861867 | None:intergenic | 40.0% |
| ATGTAGCTAATCCCACTTAG+TGG | - | chr2_4:55861847-55861866 | Msa0336450:intron | 40.0% | |
| TGTAGCTAATCCCACTTAGT+GGG | - | chr2_4:55861848-55861867 | Msa0336450:intron | 40.0% | |
| TAATCCCACTTAGTGGGATA+AGG | - | chr2_4:55861854-55861873 | Msa0336450:intron | 40.0% | |
| ! | CTGTTGCGATTGTTTTCACT+TGG | - | chr2_4:55862022-55862041 | Msa0336450:intron | 40.0% |
| ! | TTGCGATTGTTTTCACTTGG+AGG | - | chr2_4:55862025-55862044 | Msa0336450:intron | 40.0% |
| AGATCTCCTAATCCTACACA+AGG | - | chr2_4:55862054-55862073 | Msa0336450:intron | 40.0% | |
| GATCTCCTAATCCTACACAA+GGG | - | chr2_4:55862055-55862074 | Msa0336450:intron | 40.0% | |
| TTTGAATTTGTGCTAGCTCC+AGG | + | chr2_4:55862117-55862136 | None:intergenic | 40.0% | |
| !! | GAAGGTAAAGAAGCATCAGA+AGG | + | chr2_4:55862153-55862172 | None:intergenic | 40.0% |
| AGCCAATGCATGAATGTTTG+TGG | - | chr2_4:55862278-55862297 | Msa0336450:intron | 40.0% | |
| GAAGTTGAGTGAAGGAAGAA+AGG | - | chr2_4:55862394-55862413 | Msa0336450:intron | 40.0% | |
| TTTCTTATGATCGCAGGAGA+TGG | + | chr2_4:55862515-55862534 | None:intergenic | 40.0% | |
| TCGACATTTCTTATGATCGC+AGG | + | chr2_4:55862521-55862540 | None:intergenic | 40.0% | |
| CCTAGGAAGTTGTATACTCT+AGG | + | chr2_4:55862679-55862698 | None:intergenic | 40.0% | |
| CCTAGAGTATACAACTTCCT+AGG | - | chr2_4:55862676-55862695 | Msa0336450:intron | 40.0% | |
| ! | TGGGAATACTTGATGACATG+AGG | - | chr2_4:55863290-55863309 | Msa0336450:CDS | 40.0% |
| CAACAATACTTCTAGCACAG+AGG | + | chr2_4:55863569-55863588 | None:intergenic | 40.0% | |
| !! | CTCTGTGCTAGAAGTATTGT+TGG | - | chr2_4:55863567-55863586 | Msa0336450:intron | 40.0% |
| CAGTATGTGTGTTCCAAACT+AGG | + | chr2_4:55864227-55864246 | None:intergenic | 40.0% | |
| AGAGTAGCAAGAGGAATACT+AGG | + | chr2_4:55864344-55864363 | None:intergenic | 40.0% | |
| TTGTAGCGTTAGAAGAAGCA+GGG | - | chr2_4:55864438-55864457 | Msa0336450:intron | 40.0% | |
| AAGTTAACCACCTTCTTGCT+GGG | - | chr2_4:55864541-55864560 | Msa0336450:intron | 40.0% | |
| ! | CCTTTTACATTGTCCTTGCA+TGG | + | chr2_4:55864964-55864983 | None:intergenic | 40.0% |
| CCATGCAAGGACAATGTAAA+AGG | - | chr2_4:55864961-55864980 | Msa0336450:intron | 40.0% | |
| !! | TGCTCTTTTCAAGACATCCT+TGG | - | chr2_4:55865185-55865204 | Msa0336450:intron | 40.0% |
| ! | CTTGCAGGCATCAGAATTTT+AGG | + | chr2_4:55865213-55865232 | None:intergenic | 40.0% |
| GATATCCCATACCTATATGC+AGG | - | chr2_4:55865412-55865431 | Msa0336450:intron | 40.0% | |
| GAGAACCTGCATATAGGTAT+GGG | + | chr2_4:55865420-55865439 | None:intergenic | 40.0% | |
| AGAGAACCTGCATATAGGTA+TGG | + | chr2_4:55865421-55865440 | None:intergenic | 40.0% | |
| ! | TTTGTGTCGATATGCCAATC+TGG | + | chr2_4:55865491-55865510 | None:intergenic | 40.0% |
| AGCTAACTGGGTGACAATTT+CGG | + | chr2_4:55865516-55865535 | None:intergenic | 40.0% | |
| !! | CTGTTTTATAAGGCGCTATG+TGG | + | chr2_4:55865679-55865698 | None:intergenic | 40.0% |
| ! | CATCTGTCTCTAGAAAAGCT+GGG | + | chr2_4:55865861-55865880 | None:intergenic | 40.0% |
| ! | TCATCTGTCTCTAGAAAAGC+TGG | + | chr2_4:55865862-55865881 | None:intergenic | 40.0% |
| !! | GTGAAAGAGGTCTTGTTTGG+AGG | + | chr2_4:55860967-55860986 | None:intergenic | 45.0% |
| !! | GAGGTGAAAGAGGTCTTGTT+TGG | + | chr2_4:55860970-55860989 | None:intergenic | 45.0% |
| AGCGTTTGATGAGGTGAAAG+AGG | + | chr2_4:55860980-55860999 | None:intergenic | 45.0% | |
| ! | AAGCACCAAAGCGTTTGATG+AGG | + | chr2_4:55860989-55861008 | None:intergenic | 45.0% |
| GAATGATTAGGAACCAGGGT+TGG | - | chr2_4:55861219-55861238 | Msa0336450:CDS | 45.0% | |
| AGCACCAATGGGAGAAAAGA+TGG | - | chr2_4:55861608-55861627 | Msa0336450:intron | 45.0% | |
| ACCAATGGGAGAAAAGATGG+TGG | - | chr2_4:55861611-55861630 | Msa0336450:intron | 45.0% | |
| ! | TCCACCATCTTTTCTCCCAT+TGG | + | chr2_4:55861615-55861634 | None:intergenic | 45.0% |
| AGACCATGCTTAGGTGGTTT+GGG | - | chr2_4:55861634-55861653 | Msa0336450:intron | 45.0% | |
| GAAGGTAGTCAGATCACTAG+TGG | - | chr2_4:55861713-55861732 | Msa0336450:intron | 45.0% | |
| AGTCAGATCACTAGTGGTAG+AGG | - | chr2_4:55861719-55861738 | Msa0336450:intron | 45.0% | |
| ! | AGAGCCTTATCCCACTAAGT+GGG | + | chr2_4:55861861-55861880 | None:intergenic | 45.0% |
| TTAGTGGGATAAGGCTCTCT+TGG | - | chr2_4:55861863-55861882 | Msa0336450:intron | 45.0% | |
| TGTGCCCGTAATTCATCTGA+AGG | + | chr2_4:55862171-55862190 | None:intergenic | 45.0% | |
| TGAGTTCTTTCAGCCAGTCA+AGG | - | chr2_4:55862203-55862222 | Msa0336450:intron | 45.0% | |
| TGGATTCCTTAACAAGTGCC+CGG | - | chr2_4:55863130-55863149 | Msa0336450:intron | 45.0% | |
| TAGGTAACCTGTCGTCTTCT+TGG | - | chr2_4:55863399-55863418 | Msa0336450:intron | 45.0% | |
| TCTTCTTGGAGTGATCCTTG+AGG | - | chr2_4:55863413-55863432 | Msa0336450:intron | 45.0% | |
| TGCTACAACAGAGTAGCAAG+AGG | + | chr2_4:55864353-55864372 | None:intergenic | 45.0% | |
| CTTGTAGCGTTAGAAGAAGC+AGG | - | chr2_4:55864437-55864456 | Msa0336450:intron | 45.0% | |
| TGTAGCGTTAGAAGAAGCAG+GGG | - | chr2_4:55864439-55864458 | Msa0336450:intron | 45.0% | |
| GGTATTCACTTCAGGTGGTT+TGG | - | chr2_4:55864460-55864479 | Msa0336450:intron | 45.0% | |
| !! | CACTTCAGGTGGTTTGGTTA+AGG | - | chr2_4:55864466-55864485 | Msa0336450:intron | 45.0% |
| !! | AGGTGGTTTGGTTAAGGACA+AGG | - | chr2_4:55864472-55864491 | Msa0336450:intron | 45.0% |
| GAAGTTAACCACCTTCTTGC+TGG | - | chr2_4:55864540-55864559 | Msa0336450:intron | 45.0% | |
| GAGCATATACAGCCAGCAAA+TGG | + | chr2_4:55865170-55865189 | None:intergenic | 45.0% | |
| GCTGAAGAGAACCTGCATAT+AGG | + | chr2_4:55865426-55865445 | None:intergenic | 45.0% | |
| GCTAACTGGGTGACAATTTC+GGG | + | chr2_4:55865515-55865534 | None:intergenic | 45.0% | |
| !! | TGGAGCACTGAACACATTAG+CGG | + | chr2_4:55865711-55865730 | None:intergenic | 45.0% |
| TGTGTTCAGTGCTCCATCTT+TGG | - | chr2_4:55865715-55865734 | Msa0336450:intron | 45.0% | |
| !! | CTTTGATGGGTTCTCACACT+AGG | - | chr2_4:55865908-55865927 | Msa0336450:CDS | 45.0% |
| !!! | TTAATTTGTTATATTTTTTT+AGG | - | chr2_4:55862978-55862997 | Msa0336450:intron | 5.0% |
| AACCTCTGACGACAGCTCAT+AGG | - | chr2_4:55860774-55860793 | Msa0336450:three_prime_UTR | 50.0% | |
| CTCATAGGCGCAGTTGTTGA+CGG | - | chr2_4:55860789-55860808 | Msa0336450:three_prime_UTR | 50.0% | |
| CAGTTGTTGACGGCAAACCA+CGG | - | chr2_4:55860799-55860818 | Msa0336450:three_prime_UTR | 50.0% | |
| CAAATTCCGGTGAGGCCTTA+CGG | - | chr2_4:55860901-55860920 | Msa0336450:three_prime_UTR | 50.0% | |
| ATCGTTGTCACCACCAGACA+CGG | + | chr2_4:55860940-55860959 | None:intergenic | 50.0% | |
| GTAGAGAGAGAGAGAGAGAG+AGG | + | chr2_4:55861052-55861071 | None:intergenic | 50.0% | |
| GTTGGGTGTGGGTAGAAACT+AGG | - | chr2_4:55861316-55861335 | Msa0336450:intron | 50.0% | |
| AGAGTTGGGGTAGCACCAAT+GGG | - | chr2_4:55861597-55861616 | Msa0336450:intron | 50.0% | |
| !! | AGATGGTGGAGACCATGCTT+AGG | - | chr2_4:55861625-55861644 | Msa0336450:intron | 50.0% |
| GAGACCATGCTTAGGTGGTT+TGG | - | chr2_4:55861633-55861652 | Msa0336450:intron | 50.0% | |
| ATGCCCAAACCACCTAAGCA+TGG | + | chr2_4:55861640-55861659 | None:intergenic | 50.0% | |
| ! | GAGAGCCTTATCCCACTAAG+TGG | + | chr2_4:55861862-55861881 | None:intergenic | 50.0% |
| GGATATTCGCACTATTGGGG+CGG | - | chr2_4:55861987-55862006 | Msa0336450:intron | 50.0% | |
| CTCCTAATCCTACACAAGGG+AGG | - | chr2_4:55862058-55862077 | Msa0336450:intron | 50.0% | |
| TGCCTCCCTTGTGTAGGATT+AGG | + | chr2_4:55862063-55862082 | None:intergenic | 50.0% | |
| ATCCTACACAAGGGAGGCAA+CGG | - | chr2_4:55862064-55862083 | Msa0336450:intron | 50.0% | |
| GGTGGTGCATCTAGTAATCC+TGG | - | chr2_4:55862096-55862115 | Msa0336450:intron | 50.0% | |
| GTGAGGCAGAAGTTGAGTGA+AGG | - | chr2_4:55862386-55862405 | Msa0336450:intron | 50.0% | |
| AGAATGTTAACCAGTGCCCC+CGG | - | chr2_4:55863001-55863020 | Msa0336450:intron | 50.0% | |
| TAGCTGCTTAACCAATGCCC+CGG | + | chr2_4:55863023-55863042 | None:intergenic | 50.0% | |
| GGATTCCTTAACAAGTGCCC+GGG | - | chr2_4:55863131-55863150 | Msa0336450:intron | 50.0% | |
| GATTCCTTAACAAGTGCCCG+GGG | - | chr2_4:55863132-55863151 | Msa0336450:intron | 50.0% | |
| ATTCCTTAACAAGTGCCCGG+GGG | - | chr2_4:55863133-55863152 | Msa0336450:intron | 50.0% | |
| GATCACTCCAAGAAGACGAC+AGG | + | chr2_4:55863409-55863428 | None:intergenic | 50.0% | |
| CCTCTGGACTACTTTCCTCA+AGG | + | chr2_4:55863431-55863450 | None:intergenic | 50.0% | |
| CCTTGAGGAAAGTAGTCCAG+AGG | - | chr2_4:55863428-55863447 | Msa0336450:intron | 50.0% | |
| AAGTAGTCCAGAGGAGCTTC+AGG | - | chr2_4:55863437-55863456 | Msa0336450:intron | 50.0% | |
| TTTCACACCTGAAGCTCCTC+TGG | + | chr2_4:55863447-55863466 | None:intergenic | 50.0% | |
| ATATCTCATGGACCGGGTTC+TGG | - | chr2_4:55863612-55863631 | Msa0336450:intron | 50.0% | |
| !! | GAAGCAGGGGTATTCACTTC+AGG | - | chr2_4:55864452-55864471 | Msa0336450:intron | 50.0% |
| AACCGTCATCATGACTAGGG+AGG | - | chr2_4:55864902-55864921 | Msa0336450:intron | 50.0% | |
| ACCGTCATCATGACTAGGGA+GGG | - | chr2_4:55864903-55864922 | Msa0336450:intron | 50.0% | |
| ! | CTCTTCAGCAGCACTGAGAA+TGG | - | chr2_4:55865437-55865456 | Msa0336450:intron | 50.0% |
| ! | GATGGGTTCTCACACTAGGT+TGG | - | chr2_4:55865912-55865931 | Msa0336450:CDS | 50.0% |
| TCATACACGTGCACAGAAGC+AGG | + | chr2_4:55865945-55865964 | None:intergenic | 50.0% | |
| GGCCTTACGGTGGTGAAACA+TGG | - | chr2_4:55860914-55860933 | Msa0336450:three_prime_UTR | 55.0% | |
| GGCCATGTTTCACCACCGTA+AGG | + | chr2_4:55860919-55860938 | None:intergenic | 55.0% | |
| TGGTGAAACATGGCCGTGTC+TGG | - | chr2_4:55860924-55860943 | Msa0336450:three_prime_UTR | 55.0% | |
| TGAAACATGGCCGTGTCTGG+TGG | - | chr2_4:55860927-55860946 | Msa0336450:three_prime_UTR | 55.0% | |
| GAGAGTTGGGGTAGCACCAA+TGG | - | chr2_4:55861596-55861615 | Msa0336450:intron | 55.0% | |
| TGGTGGAGACCATGCTTAGG+TGG | - | chr2_4:55861628-55861647 | Msa0336450:intron | 55.0% | |
| TTCCGTTGCCTCCCTTGTGT+AGG | + | chr2_4:55862069-55862088 | None:intergenic | 55.0% | |
| CACAAGGGAGGCAACGGAAA+AGG | - | chr2_4:55862070-55862089 | Msa0336450:intron | 55.0% | |
| AGGCAACGGAAAAGGCAAGG+TGG | - | chr2_4:55862078-55862097 | Msa0336450:intron | 55.0% | |
| CTCACTATCTGCCCCAAGGT+TGG | + | chr2_4:55862371-55862390 | None:intergenic | 55.0% | |
| CAACCTTGGGGCAGATAGTG+AGG | - | chr2_4:55862369-55862388 | Msa0336450:intron | 55.0% | |
| GAATGTTAACCAGTGCCCCC+GGG | - | chr2_4:55863002-55863021 | Msa0336450:intron | 55.0% | |
| AATGTTAACCAGTGCCCCCG+GGG | - | chr2_4:55863003-55863022 | Msa0336450:intron | 55.0% | |
| AGCTGCTTAACCAATGCCCC+GGG | + | chr2_4:55863022-55863041 | None:intergenic | 55.0% | |
| TCTTGTTAACCAGTGCCCCC+GGG | + | chr2_4:55863151-55863170 | None:intergenic | 55.0% | |
| ! | GTCTTGTTAACCAGTGCCCC+CGG | + | chr2_4:55863152-55863171 | None:intergenic | 55.0% |
| CGCTTTCGTCATCCAGAACC+CGG | + | chr2_4:55863627-55863646 | None:intergenic | 55.0% | |
| !! | GGTTCTGGATGACGAAAGCG+AGG | - | chr2_4:55863627-55863646 | Msa0336450:intron | 55.0% |
| !! | GCAGGGGTATTCACTTCAGG+TGG | - | chr2_4:55864455-55864474 | Msa0336450:intron | 55.0% |
| AACACTGCCCAGCAAGAAGG+TGG | + | chr2_4:55864551-55864570 | None:intergenic | 55.0% | |
| TGCAACACTGCCCAGCAAGA+AGG | + | chr2_4:55864554-55864573 | None:intergenic | 55.0% | |
| CCCCTCCCTAGTCATGATGA+CGG | + | chr2_4:55864907-55864926 | None:intergenic | 55.0% | |
| CCGTCATCATGACTAGGGAG+GGG | - | chr2_4:55864904-55864923 | Msa0336450:intron | 55.0% | |
| CGCCTATGAGCTGTCGTCAG+AGG | + | chr2_4:55860779-55860798 | None:intergenic | 60.0% | |
| ATTCCGGTGAGGCCTTACGG+TGG | - | chr2_4:55860904-55860923 | Msa0336450:three_prime_UTR | 60.0% | |
| TCACCACCGTAAGGCCTCAC+CGG | + | chr2_4:55860910-55860929 | None:intergenic | 60.0% | |
| GGGAGGCAACGGAAAAGGCA+AGG | - | chr2_4:55862075-55862094 | Msa0336450:intron | 60.0% | |
| CTGCCTCACTATCTGCCCCA+AGG | + | chr2_4:55862375-55862394 | None:intergenic | 60.0% | |
| CTGCTTAACCAATGCCCCGG+GGG | + | chr2_4:55863020-55863039 | None:intergenic | 60.0% | |
| GCTGCTTAACCAATGCCCCG+GGG | + | chr2_4:55863021-55863040 | None:intergenic | 60.0% | |
| CGCACTATTGGGGCGGTAGC+TGG | - | chr2_4:55861994-55862013 | Msa0336450:intron | 65.0% | |
| ! | GTGCCCCCGGGCACTTGTTA+AGG | + | chr2_4:55863139-55863158 | None:intergenic | 65.0% |
| ! | TAACAAGTGCCCGGGGGCAC+TGG | - | chr2_4:55863139-55863158 | Msa0336450:intron | 65.0% |
| AACCAGTGCCCCCGGGGCAT+TGG | - | chr2_4:55863009-55863028 | Msa0336450:intron | 70.0% | |
| ! | AACCAATGCCCCGGGGGCAC+TGG | + | chr2_4:55863014-55863033 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 55860731 | 55866175 | 55860731 | ID=Msa0336450;Name=Msa0336450 |
| chr2_4 | mRNA | 55860731 | 55866175 | 55860731 | ID=Msa0336450-mRNA-1;Parent=Msa0336450;Name=Msa0336450-mRNA-1;_AED=0.08;_eAED=0.08;_QI=202|1|1|1|1|1|8|415|275 |
| chr2_4 | exon | 55860731 | 55861250 | 55860731 | ID=Msa0336450-mRNA-1:exon:17000;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55861371 | 55861472 | 55861371 | ID=Msa0336450-mRNA-1:exon:16999;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55862413 | 55862478 | 55862413 | ID=Msa0336450-mRNA-1:exon:16998;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55863258 | 55863359 | 55863258 | ID=Msa0336450-mRNA-1:exon:16997;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55863448 | 55863504 | 55863448 | ID=Msa0336450-mRNA-1:exon:16996;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55864491 | 55864538 | 55864491 | ID=Msa0336450-mRNA-1:exon:16995;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55864682 | 55864918 | 55864682 | ID=Msa0336450-mRNA-1:exon:16994;Parent=Msa0336450-mRNA-1 |
| chr2_4 | exon | 55865863 | 55866175 | 55865863 | ID=Msa0336450-mRNA-1:exon:16993;Parent=Msa0336450-mRNA-1 |
| chr2_4 | five_prime_UTR | 55865974 | 55866175 | 55865974 | ID=Msa0336450-mRNA-1:five_prime_utr;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55865863 | 55865973 | 55865863 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55864682 | 55864918 | 55864682 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55864491 | 55864538 | 55864491 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55863448 | 55863504 | 55863448 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55863258 | 55863359 | 55863258 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55862413 | 55862478 | 55862413 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55861371 | 55861472 | 55861371 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | CDS | 55861146 | 55861250 | 55861146 | ID=Msa0336450-mRNA-1:cds;Parent=Msa0336450-mRNA-1 |
| chr2_4 | three_prime_UTR | 55860731 | 55861145 | 55860731 | ID=Msa0336450-mRNA-1:three_prime_utr;Parent=Msa0336450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
