AlfalfaGEDB | Msa0472930

M. sativa cultivar zhongmu-4 / Msa0472930

KEGG: K03145
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006354 GO:0006355 GO:0006725 GO:0006807 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032784 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2001141
PFAM: PF08711.14

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472930	XP_013461492.1	99.729	369	1	0	1	369	1	369	0.0	757

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472930	sp\|Q9ZVH8\|RDO2_ARATH	53.368	386	149	11	6	369	2	378	3.18e-117	347

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472930	A0A072V117	99.729	369	1	0	1	369	1	369	0.0	757

TFs/TRs:

Gene ID	Type	Classification
Msa0472930	TR	IWS1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000910	Msa0472930	0.813466	2.524050e-51	-8.615850e-47
Msa0017730	Msa0472930	0.865950	4.071468e-65	-8.615850e-47
Msa0024400	Msa0472930	0.824301	8.694413e-54	-8.615850e-47
Msa0024930	Msa0472930	0.807366	5.235319e-50	-8.615850e-47
Msa0029630	Msa0472930	0.861178	1.231623e-63	-8.615850e-47
Msa0079920	Msa0472930	0.837552	4.858622e-57	-8.615850e-47
Msa0091730	Msa0472930	0.819294	1.252315e-52	-8.615850e-47
Msa0098240	Msa0472930	0.828572	8.346726e-55	-8.615850e-47
Msa0120280	Msa0472930	0.800225	1.592587e-48	-8.615850e-47
Msa0120880	Msa0472930	0.827635	1.403274e-54	-8.615850e-47
Msa0122530	Msa0472930	0.832368	9.840544e-56	-8.615850e-47
Msa0125450	Msa0472930	0.857082	2.079627e-62	-8.615850e-47
Msa0125540	Msa0472930	0.835266	1.855054e-56	-8.615850e-47
Msa0131590	Msa0472930	0.813367	2.652702e-51	-8.615850e-47
Msa0145960	Msa0472930	0.817990	2.476058e-52	-8.615850e-47
Msa0149440	Msa0472930	0.839664	1.384424e-57	-8.615850e-47
Msa0163510	Msa0472930	0.823832	1.119975e-53	-8.615850e-47
Msa0172980	Msa0472930	0.822754	1.999951e-53	-8.615850e-47
Msa0177960	Msa0472930	0.850172	2.015688e-60	-8.615850e-47
Msa0190870	Msa0472930	0.860370	2.165293e-63	-8.615850e-47
Msa0194920	Msa0472930	0.809898	1.507268e-50	-8.615850e-47
Msa0202490	Msa0472930	0.845677	3.497308e-59	-8.615850e-47
Msa0204960	Msa0472930	0.811830	5.754527e-51	-8.615850e-47
Msa0215990	Msa0472930	0.885449	8.056906e-72	-8.615850e-47
Msa0217670	Msa0472930	0.856510	3.064130e-62	-8.615850e-47
Msa0220990	Msa0472930	0.824889	6.320256e-54	-8.615850e-47
Msa0230820	Msa0472930	0.813429	2.571146e-51	-8.615850e-47
Msa0237300	Msa0472930	0.825083	5.687679e-54	-8.615850e-47
Msa0377820	Msa0472930	0.991729	3.205171e-189	-8.615850e-47
Msa0385500	Msa0472930	0.853583	2.170967e-61	-8.615850e-47
Msa0426580	Msa0472930	0.933070	3.283357e-95	-8.615850e-47
Msa0437020	Msa0472930	0.814997	1.158364e-51	-8.615850e-47
Msa0439960	Msa0472930	0.845409	4.134684e-59	-8.615850e-47
Msa0456430	Msa0472930	0.840482	8.466682e-58	-8.615850e-47
Msa0462600	Msa0472930	0.879615	1.078515e-69	-8.615850e-47
Msa0466350	Msa0472930	0.810943	8.964433e-51	-8.615850e-47
Msa0472930	Msa0491000	0.809137	2.195505e-50	-8.615850e-47
Msa0472930	Msa0517590	0.924385	7.564218e-90	-8.615850e-47
Msa0472930	Msa0527540	0.817206	3.718474e-52	-8.615850e-47
Msa0472930	Msa0531250	0.801516	8.679071e-49	-8.615850e-47
Msa0472930	Msa0542560	0.800253	1.572045e-48	-8.615850e-47
Msa0472930	Msa0549450	0.852516	4.385018e-61	-8.615850e-47
Msa0472930	Msa0549950	0.819256	1.277734e-52	-8.615850e-47
Msa0472930	Msa0566940	-0.800638	1.312056e-48	-8.615850e-47
Msa0472930	Msa0577770	0.814293	1.658556e-51	-8.615850e-47
Msa0472930	Msa0603090	0.814336	1.622810e-51	-8.615850e-47
Msa0472930	Msa0610550	0.856442	3.208331e-62	-8.615850e-47
Msa0472930	Msa0622790	0.836063	1.165547e-56	-8.615850e-47
Msa0472930	Msa0628420	0.804575	2.022541e-49	-8.615850e-47
Msa0472930	Msa0646020	0.818255	2.155881e-52	-8.615850e-47
Msa0472930	Msa0646420	0.822847	1.902622e-53	-8.615850e-47
Msa0472930	Msa0651560	0.815651	8.289299e-52	-8.615850e-47
Msa0472930	Msa0651870	0.800794	1.219236e-48	-8.615850e-47
Msa0472930	Msa0662220	0.832086	1.155097e-55	-8.615850e-47
Msa0472930	Msa0689440	0.835035	2.120818e-56	-8.615850e-47
Msa0472930	Msa0690310	0.817886	2.612713e-52	-8.615850e-47
Msa0472930	Msa0693210	0.838868	2.227218e-57	-8.615850e-47
Msa0472930	Msa0693330	0.800927	1.145638e-48	-8.615850e-47
Msa0472930	Msa0712860	0.802139	6.463417e-49	-8.615850e-47
Msa0472930	Msa0750530	0.812351	4.429164e-51	-8.615850e-47
Msa0472930	Msa0752700	0.836465	9.213154e-57	-8.615850e-47
Msa0472930	Msa0761310	0.818805	1.618499e-52	-8.615850e-47
Msa0472930	Msa0766080	0.809991	1.439221e-50	-8.615850e-47
Msa0472930	Msa0794970	0.839738	1.324141e-57	-8.615850e-47
Msa0472930	Msa0803780	0.816372	5.720774e-52	-8.615850e-47
Msa0472930	Msa0828590	0.865479	5.733593e-65	-8.615850e-47
Msa0472930	Msa0831100	0.838592	2.624548e-57	-8.615850e-47
Msa0472930	Msa0838370	0.804404	2.195891e-49	-8.615850e-47
Msa0472930	Msa0870750	0.811165	8.024806e-51	-8.615850e-47
Msa0472930	Msa0910960	0.834240	3.359796e-56	-8.615850e-47
Msa0472930	Msa0936480	0.825475	4.593979e-54	-8.615850e-47
Msa0472930	Msa0958000	0.841531	4.490174e-58	-8.615850e-47
Msa0472930	Msa0959520	0.826325	2.886753e-54	-8.615850e-47
Msa0472930	Msa0973420	0.802350	5.850210e-49	-8.615850e-47
Msa0472930	Msa0980540	0.820652	6.125137e-53	-8.615850e-47
Msa0472930	Msa0992510	0.810078	1.378511e-50	-8.615850e-47
Msa0472930	Msa0995370	0.830352	3.081673e-55	-8.615850e-47
Msa0472930	Msa1037510	0.808825	2.560887e-50	-8.615850e-47
Msa0472930	Msa1039810	0.806188	9.286261e-50	-8.615850e-47
Msa0472930	Msa1071050	0.800426	1.449291e-48	-8.615850e-47
Msa0472930	Msa1118860	0.823888	1.086972e-53	-8.615850e-47
Msa0472930	Msa1123350	0.825385	4.824587e-54	-8.615850e-47
Msa0472930	Msa1127590	0.829131	6.111913e-55	-8.615850e-47
Msa0472930	Msa1128280	0.819179	1.330761e-52	-8.615850e-47
Msa0472930	Msa1130980	0.816655	4.943325e-52	-8.615850e-47
Msa0472930	Msa1131680	0.804557	2.039742e-49	-8.615850e-47
Msa0472930	Msa1165270	0.825337	4.952063e-54	-8.615850e-47
Msa0472930	Msa1175350	0.866994	1.897477e-65	-8.615850e-47
Msa0472930	Msa1190100	-0.809391	1.936368e-50	-8.615850e-47
Msa0472930	Msa1191930	0.813530	2.443285e-51	-8.615850e-47
Msa0472930	Msa1192140	-0.805138	1.542644e-49	-8.615850e-47
Msa0472930	Msa1197600	0.842179	3.028971e-58	-8.615850e-47
Msa0472930	Msa1205890	0.819464	1.145631e-52	-8.615850e-47
Msa0472930	Msa1213040	0.823056	1.700555e-53	-8.615850e-47
Msa0472930	Msa1228040	0.864836	9.125609e-65	-8.615850e-47
Msa0472930	Msa1235610	0.802668	5.029070e-49	-8.615850e-47
Msa0472930	Msa1258030	-0.840074	1.082214e-57	-8.615850e-47
Msa0472930	Msa1260220	0.873139	1.853555e-67	-8.615850e-47
Msa0472930	Msa1267830	0.874034	9.254154e-68	-8.615850e-47
Msa0472930	Msa1277260	0.824937	6.157892e-54	-8.615850e-47
Msa0472930	Msa1292020	0.822252	2.617045e-53	-8.615850e-47
Msa0472930	Msa1315890	0.844494	7.304129e-59	-8.615850e-47
Msa0472930	Msa1327640	0.841458	4.693611e-58	-8.615850e-47
Msa0472930	Msa1334750	0.844322	8.121216e-59	-8.615850e-47
Msa0472930	Msa1340480	0.812651	3.808786e-51	-8.615850e-47
Msa0472930	Msa1341300	0.804974	1.669229e-49	-8.615850e-47
Msa0472930	Msa1373850	0.816280	5.997403e-52	-8.615850e-47
Msa0472930	Msa1392980	0.816822	4.535798e-52	-8.615850e-47
Msa0472930	Msa1407370	0.804953	1.686523e-49	-8.615850e-47
Msa0472930	Msa1411950	0.809678	1.680049e-50	-8.615850e-47
Msa0472930	Msa1411970	0.824116	9.610242e-54	-8.615850e-47
Msa0472930	Msa1414820	0.809853	1.540550e-50	-8.615850e-47
Msa0472930	Msa1418340	0.813919	2.005779e-51	-8.615850e-47
Msa0472930	Msa1433700	0.812518	4.071209e-51	-8.615850e-47
Msa0472930	Msa1434090	0.809512	1.824047e-50	-8.615850e-47
Msa0472930	Msa1443180	0.827684	1.365867e-54	-8.615850e-47
Msa0472930	Msa1458290	0.809818	1.567698e-50	-8.615850e-47
Msa0244980	Msa0472930	0.809887	1.514812e-50	-8.615850e-47
Msa0245580	Msa0472930	0.842679	2.232108e-58	-8.615850e-47
Msa0256140	Msa0472930	0.862145	6.235151e-64	-8.615850e-47
Msa0257490	Msa0472930	0.827451	1.553580e-54	-8.615850e-47
Msa0261010	Msa0472930	0.825764	3.923048e-54	-8.615850e-47
Msa0274720	Msa0472930	0.827661	1.383100e-54	-8.615850e-47
Msa0281530	Msa0472930	0.835098	2.044679e-56	-8.615850e-47
Msa0284180	Msa0472930	0.848934	4.464599e-60	-8.615850e-47
Msa0295250	Msa0472930	0.831328	1.776106e-55	-8.615850e-47
Msa0296250	Msa0472930	0.816973	4.194964e-52	-8.615850e-47
Msa0296630	Msa0472930	-0.842143	3.094770e-58	-8.615850e-47
Msa0296790	Msa0472930	0.838961	2.106895e-57	-8.615850e-47
Msa0300280	Msa0472930	0.802929	4.442048e-49	-8.615850e-47
Msa0305310	Msa0472930	0.807651	4.554816e-50	-8.615850e-47
Msa0307380	Msa0472930	0.821939	3.091521e-53	-8.615850e-47
Msa0315520	Msa0472930	0.837234	5.861832e-57	-8.615850e-47
Msa0319640	Msa0472930	0.806015	1.010046e-49	-8.615850e-47
Msa0320590	Msa0472930	0.838346	3.036832e-57	-8.615850e-47
Msa0332640	Msa0472930	0.811833	5.743638e-51	-8.615850e-47
Msa0336450	Msa0472930	0.855424	6.366441e-62	-8.615850e-47
Msa0336540	Msa0472930	0.871215	8.095069e-67	-8.615850e-47
Msa0343500	Msa0472930	0.821361	4.205872e-53	-8.615850e-47
Msa0363060	Msa0472930	0.804353	2.249614e-49	-8.615850e-47
Msa0363640	Msa0472930	0.803253	3.808127e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472930	MtrunA17_Chr3g0128651	99.729	369	1	0	1	369	1	369	0.0	757

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472930	AT2G38560.1	53.368	386	149	11	6	369	2	378	3.24e-118	347
Msa0472930	AT2G42725.1	48.031	127	65	1	189	314	104	230	7.49e-32	120
Msa0472930	AT4G18720.1	51.724	116	55	1	184	298	100	215	1.12e-29	115
Msa0472930	AT5G42325.1	40.625	128	58	3	189	314	104	215	2.79e-19	86.3

Find 122 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAAAAGGAAGAGCAATTA+TGG	0.211694	3_3:-75399778	None:intergenic
GCGAGTTTGCATTTGGTAAT+AGG	0.248412	3_3:-75399231	None:intergenic
GTCCTTAATGTTTAATCTTA+AGG	0.250681	3_3:+75398992	Msa0472930:CDS
ATTCAGCGCGAGACAAAATA+AGG	0.257557	3_3:+75398808	Msa0472930:CDS
ATCCTTAAGATTAAACATTA+AGG	0.282366	3_3:-75398994	None:intergenic
ATCAGAAGAACCCTGATTTC+CGG	0.285749	3_3:+75399015	Msa0472930:CDS
AGGACCTATACTTGACCTTT+TGG	0.308451	3_3:-75398974	None:intergenic
AGTCCGTATTATTTGAAAAC+TGG	0.312826	3_3:+75398934	Msa0472930:CDS
CTGTTGACTTAATTGCGATA+TGG	0.314443	3_3:+75398442	Msa0472930:CDS
GCCAAGGTGGAGAAAGTTAA+TGG	0.315639	3_3:+75398603	Msa0472930:CDS
TTTGGGTTGTACTATTTAGT+AGG	0.328951	3_3:+75399746	Msa0472930:three_prime_UTR
CCGCAGCCGCAGAACACAAC+AGG	0.331302	3_3:+75396505	Msa0472930:five_prime_UTR
AATTGATCAGTAGTAGCTTT+TGG	0.339749	3_3:-75399176	None:intergenic
ATCAAATATATGAGCCCTTT+GGG	0.346712	3_3:+75399729	Msa0472930:three_prime_UTR
GAGGCAACGGGTTTCTTCGC+TGG	0.347716	3_3:-75396742	None:intergenic
TATCAAATATATGAGCCCTT+TGG	0.348199	3_3:+75399728	Msa0472930:three_prime_UTR
ACTGTCACTGCCACACGAAT+AGG	0.349730	3_3:-75398909	None:intergenic
GTATCATCTCTTTCAACCTT+AGG	0.351555	3_3:+75396442	Msa0472930:five_prime_UTR
TCAACTAATGCTCTTGCATT+TGG	0.360782	3_3:-75399672	None:intergenic
GTTACATTTAGAAATTGTTT+AGG	0.370539	3_3:+75399448	Msa0472930:three_prime_UTR
CAGCACTGCGAGTTTGCATT+TGG	0.373188	3_3:-75399238	None:intergenic
AGCATCCCAGGGAGAACATT+CGG	0.381324	3_3:+75398412	Msa0472930:CDS
CTCCTTCGCTTTGATGTTCG+AGG	0.381420	3_3:-75398703	None:intergenic
CGTCATGAGCTCAGCAGAAA+TGG	0.387279	3_3:+75399079	Msa0472930:CDS
GAACGGGGCCTCTGATTCTA+AGG	0.389336	3_3:+75398500	Msa0472930:CDS
TGTTATGTTATCAAATAAGT+TGG	0.389468	3_3:-75399615	None:intergenic
ATCATAGTCTTCAGCTTTGG+TGG	0.390447	3_3:-75398774	None:intergenic
CTTTGGTGGAGCAGCAGCGC+TGG	0.398518	3_3:-75398760	None:intergenic
AGTTGAGTCCCATCCGATCT+TGG	0.405397	3_3:+75399689	Msa0472930:three_prime_UTR
AGAAAAGGAAGAGCAATTAT+GGG	0.419297	3_3:-75399777	None:intergenic
GAAAACTGGGGTCCTTCAAA+TGG	0.424609	3_3:+75398948	Msa0472930:CDS
CCTGTTGTGTTCTGCGGCTG+CGG	0.429550	3_3:-75396505	None:intergenic
TTGATCATAGTCTTCAGCTT+TGG	0.429713	3_3:-75398777	None:intergenic
TACTGTTGAGCCACAGCGGC+TGG	0.438165	3_3:+75399055	Msa0472930:CDS
TTCAAGCGCATCGAGGCAAC+GGG	0.440343	3_3:-75396754	None:intergenic
GCATCCCAGGGAGAACATTC+GGG	0.444394	3_3:+75398413	Msa0472930:CDS
CTCATGACGGCCAGCCGCTG+TGG	0.450612	3_3:-75399065	None:intergenic
CTGTCACTGCCACACGAATA+GGG	0.453244	3_3:-75398908	None:intergenic
TTCTGCGGCTGCGGTGTTGT+TGG	0.454667	3_3:-75396496	None:intergenic
TTTGTTAGTACTGTGGTGAT+TGG	0.458548	3_3:+75399315	Msa0472930:exon
TTATCAAATAAGTTGGGACT+TGG	0.459330	3_3:-75399608	None:intergenic
AGGCAACGGGTTTCTTCGCT+GGG	0.460026	3_3:-75396741	None:intergenic
TTCGTGTAACAGAGAGTGGT+TGG	0.462260	3_3:+75396626	Msa0472930:intron
GTTATGTTATCAAATAAGTT+GGG	0.466360	3_3:-75399614	None:intergenic
TCCTTCAAATGGAGCCCAAA+AGG	0.467781	3_3:+75398959	Msa0472930:CDS
AAACTCTCACCAAGCATCCC+AGG	0.468100	3_3:+75398400	Msa0472930:CDS
CAGAGAGTGGTTGGGTTCGA+TGG	0.468288	3_3:+75396635	Msa0472930:intron
GTGGTTGGGTTCGATGGAGA+AGG	0.470982	3_3:+75396641	Msa0472930:exon
GGTTCATCAAAGCTGAGCTC+TGG	0.479292	3_3:+75398630	Msa0472930:CDS
TTCTTCGCTGGGACTATCAT+CGG	0.481323	3_3:-75396730	None:intergenic
GAGAAACGAAACAAGAGAAA+AGG	0.481914	3_3:-75396466	None:intergenic
AATGTTCTCCCTGGGATGCT+TGG	0.486291	3_3:-75398409	None:intergenic
CAAGTGACATAGGTTGTCAT+AGG	0.486857	3_3:-75399266	None:intergenic
CCCATTAACTTTCTCCACCT+TGG	0.490756	3_3:-75398604	None:intergenic
CCTTTCTCAACCTTCACTGA+AGG	0.497037	3_3:-75398573	None:intergenic
ATGGAAAGACGTAATTATCA+AGG	0.497212	3_3:+75398461	Msa0472930:CDS
GTCCGTATTATTTGAAAACT+GGG	0.498242	3_3:+75398935	Msa0472930:CDS
GTTCAAGCGCATCGAGGCAA+CGG	0.502578	3_3:-75396755	None:intergenic
TTGGGTTGTACTATTTAGTA+GGG	0.506283	3_3:+75399747	Msa0472930:three_prime_UTR
TCGTGTAACAGAGAGTGGTT+GGG	0.509152	3_3:+75396627	Msa0472930:intron
CCAAGGTGGAGAAAGTTAAT+GGG	0.509185	3_3:+75398604	Msa0472930:CDS
GGGACTATCATCGGTGGAGG+TGG	0.510748	3_3:-75396721	None:intergenic
AAAAGCCCGAATGTTCTCCC+TGG	0.523075	3_3:-75398418	None:intergenic
ACTAAATAGTACAACCCAAA+GGG	0.526321	3_3:-75399743	None:intergenic
CATGTCAAAGCGTTTAGAAA+AGG	0.526413	3_3:-75399792	None:intergenic
GCAGTTAACACAAGTGACAT+AGG	0.530050	3_3:-75399276	None:intergenic
CTAAGGTTGAGTCAACGAAT+GGG	0.530166	3_3:+75398517	Msa0472930:CDS
GCTCTAGAGTGTTCCAAGAT+CGG	0.534702	3_3:-75399702	None:intergenic
CCTTCAGTGAAGGTTGAGAA+AGG	0.536034	3_3:+75398573	Msa0472930:CDS
GAAGGAGAAAGAGAAAGAGT+TGG	0.537798	3_3:+75396659	Msa0472930:CDS
AGCATCCGCCGCTTTCTTCG+CGG	0.541475	3_3:-75396697	None:intergenic
AGAGGCAGATGAAGATATGA+TGG	0.547455	3_3:+75398866	Msa0472930:CDS
TAGAGTGTTCCAAGATCGGA+TGG	0.552292	3_3:-75399698	None:intergenic
AGAGTGGAAACTCACGAGAA+TGG	0.556512	3_3:-75396530	None:intergenic
GTGGAGAAAGTTAATGGGAA+TGG	0.557971	3_3:+75398609	Msa0472930:CDS
TCTCCGAGATGCTTTAGCTA+AGG	0.559780	3_3:+75398836	Msa0472930:CDS
TTCAGCGCGAGACAAAATAA+GGG	0.562584	3_3:+75398809	Msa0472930:CDS
GCTGAGCTCTGGAAATGTAA+AGG	0.564072	3_3:+75398641	Msa0472930:CDS
GCAAAAGAGTCCTTCAGTGA+AGG	0.568044	3_3:+75398563	Msa0472930:CDS
TCTAAGGTTGAGTCAACGAA+TGG	0.570762	3_3:+75398516	Msa0472930:CDS
AGTTTGCATTTGGTAATAGG+TGG	0.578245	3_3:-75399228	None:intergenic
AAAGCCCGAATGTTCTCCCT+GGG	0.578463	3_3:-75398417	None:intergenic
CTGATCAATTTAAGTGTGGT+CGG	0.587454	3_3:+75399189	Msa0472930:CDS
TATTCGTGTGGCAGTGACAG+TGG	0.587816	3_3:+75398911	Msa0472930:CDS
GCTTTGTTCGACTGTGAGCG+TGG	0.588912	3_3:+75399146	Msa0472930:CDS
CAGAAATGGCTAGTGAGCAA+AGG	0.590372	3_3:+75399093	Msa0472930:CDS
AGACCTTAGCTAAAGCATCT+CGG	0.591289	3_3:-75398839	None:intergenic
AATGGGGAGAGAGCTAAAGC+TGG	0.591506	3_3:+75398534	Msa0472930:CDS
GTGTTAACTGCAACAACCGT+TGG	0.591905	3_3:+75399288	Msa0472930:CDS
AAACAAGAGAAAAGGACCTA+AGG	0.595218	3_3:-75396458	None:intergenic
AAATGTAAAGGCACAAAATG+TGG	0.596450	3_3:+75398653	Msa0472930:CDS
TTCGCTGGGACTATCATCGG+TGG	0.598548	3_3:-75396727	None:intergenic
GAGCCCAAAAGGTCAAGTAT+AGG	0.599758	3_3:+75398970	Msa0472930:CDS
AACTCTCACCAAGCATCCCA+GGG	0.605206	3_3:+75398401	Msa0472930:CDS
CAAAATTCTCGTCAATACCC+AGG	0.608507	3_3:+75396803	Msa0472930:CDS
GAAAGGAGAAAGTGCCAAGG+TGG	0.613295	3_3:+75398590	Msa0472930:CDS
GCTGGGACTATCATCGGTGG+AGG	0.613512	3_3:-75396724	None:intergenic
TGTATGAACGTGTGATGTCA+TGG	0.617006	3_3:+75399377	Msa0472930:three_prime_UTR
ATGGGGAGAGAGCTAAAGCT+GGG	0.620446	3_3:+75398535	Msa0472930:CDS
AGTGTGGTCGGTGTGGACAA+AGG	0.621667	3_3:+75399201	Msa0472930:CDS
TTTAGCTAAGGTCTTTGAAG+AGG	0.626494	3_3:+75398848	Msa0472930:CDS
TGACTCAACCTTAGAATCAG+AGG	0.626857	3_3:-75398508	None:intergenic
CAATTTAAGTGTGGTCGGTG+TGG	0.627337	3_3:+75399194	Msa0472930:CDS
TACCTCGAACATCAAAGCGA+AGG	0.634021	3_3:+75398701	Msa0472930:CDS
TACTAAATAGTACAACCCAA+AGG	0.635614	3_3:-75399744	None:intergenic
CTCGAACATCAAAGCGAAGG+AGG	0.641252	3_3:+75398704	Msa0472930:CDS
ACTACTGATCAATTTAAGTG+TGG	0.648979	3_3:+75399185	Msa0472930:CDS
GTACGAAGCCGCGAAGAAAG+CGG	0.650598	3_3:+75396689	Msa0472930:CDS
TGAGAAAGGAGAAAGTGCCA+AGG	0.657225	3_3:+75398587	Msa0472930:CDS
AGTACTAACAAAACTTCCAA+CGG	0.659265	3_3:-75399304	None:intergenic
TAAGGTTGAGTCAACGAATG+GGG	0.661593	3_3:+75398518	Msa0472930:CDS
AGAGTGTTCCAAGATCGGAT+GGG	0.676391	3_3:-75399697	None:intergenic
ATGGTGCCTGTTGTGTTCTG+CGG	0.677677	3_3:-75396511	None:intergenic
CATTTCTGCTGAGCTCATGA+CGG	0.685355	3_3:-75399078	None:intergenic
CGAAGCCGCGAAGAAAGCGG+CGG	0.685814	3_3:+75396692	Msa0472930:CDS
TCCGTATTATTTGAAAACTG+GGG	0.694223	3_3:+75398936	Msa0472930:CDS
TGCATGTGACCCTATTCGTG+TGG	0.704457	3_3:+75398899	Msa0472930:CDS
ATTCTGGTGCTACAGTAGAG+CGG	0.706279	3_3:-75399410	None:intergenic
GGTGCTACAGTAGAGCGGTG+TGG	0.717337	3_3:-75399405	None:intergenic
TGAGCTGTTCAAGCGCATCG+AGG	0.741948	3_3:-75396761	None:intergenic
TTGGTACTGTTGAGCCACAG+CGG	0.773544	3_3:+75399051	Msa0472930:CDS
ATGAACGTGTGATGTCATGG+CGG	0.798673	3_3:+75399380	Msa0472930:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAAAATACAAGATTT+CGG	-	chr3_3:75397433-75397452	None:intergenic	10.0%
!!	AAAAATATTGCTATGAAATA+TGG	-	chr3_3:75397820-75397839	None:intergenic	15.0%
!!!	TGTTTTTAACGTTTTTTGTA+TGG	+	chr3_3:75396601-75396620	Msa0472930:intron	20.0%
!!	GAATAGAAAAATAATAACCT+GGG	-	chr3_3:75396823-75396842	None:intergenic	20.0%
!!	TGAATAGAAAAATAATAACC+TGG	-	chr3_3:75396824-75396843	None:intergenic	20.0%
!!	GAGTTATAGATTTGTAAATT+TGG	+	chr3_3:75397054-75397073	Msa0472930:intron	20.0%
!!!	TCAATTTTAGGTTTTGTTTT+TGG	+	chr3_3:75397091-75397110	Msa0472930:intron	20.0%
!!!	GTTTTGTTTTTGGTTAAATT+GGG	+	chr3_3:75397101-75397120	Msa0472930:intron	20.0%
!!	AAATCAGAAAAAACTATAAC+GGG	-	chr3_3:75397666-75397685	None:intergenic	20.0%
!!	CAAATCAGAAAAAACTATAA+CGG	-	chr3_3:75397667-75397686	None:intergenic	20.0%
!!!	TTTCTGATTTGAATAGATTT+TGG	+	chr3_3:75397676-75397695	Msa0472930:intron	20.0%
!!	TTTGTTTAGAAATATCTGTA+GGG	-	chr3_3:75397781-75397800	None:intergenic	20.0%
!!	ATTTGTTTAGAAATATCTGT+AGG	-	chr3_3:75397782-75397801	None:intergenic	20.0%
!!	AATACTAGTTCATAGTTTAT+TGG	+	chr3_3:75397870-75397889	Msa0472930:intron	20.0%
!!	AACAAACTATTTATTAAGCA+AGG	-	chr3_3:75398030-75398049	None:intergenic	20.0%
!!	ATAGAAAAAACTGTAGTATT+TGG	+	chr3_3:75398228-75398247	Msa0472930:intron	20.0%
!!	AAAAGAAATAGAGATAGTTA+AGG	+	chr3_3:75398260-75398279	Msa0472930:intron	20.0%
!!	AAAGAAATAGAGATAGTTAA+GGG	+	chr3_3:75398261-75398280	Msa0472930:intron	20.0%
!!!	TCAAATCTTTACTTTTTTCA+TGG	+	chr3_3:75398299-75398318	Msa0472930:intron	20.0%
!!	GAAACAAGTAAAAATAAGAA+CGG	+	chr3_3:75398483-75398502	Msa0472930:CDS	20.0%
!!	AAACAAGTAAAAATAAGAAC+GGG	+	chr3_3:75398484-75398503	Msa0472930:CDS	20.0%
!!	ATCCTTAAGATTAAACATTA+AGG	-	chr3_3:75398997-75399016	None:intergenic	20.0%
!!	GTTACATTTAGAAATTGTTT+AGG	+	chr3_3:75399448-75399467	Msa0472930:three_prime_UTR	20.0%
!!	GTTATGTTATCAAATAAGTT+GGG	-	chr3_3:75399617-75399636	None:intergenic	20.0%
!!	TGTTATGTTATCAAATAAGT+TGG	-	chr3_3:75399618-75399637	None:intergenic	20.0%
!!	TCTATTCACATTGCAAATTT+TGG	+	chr3_3:75396836-75396855	Msa0472930:intron	25.0%
!!	TTTTGCATGTTATAGTTGTT+AGG	+	chr3_3:75396932-75396951	Msa0472930:intron	25.0%
!	TTTGCATGTTATAGTTGTTA+GGG	+	chr3_3:75396933-75396952	Msa0472930:intron	25.0%
!!!	GGTTTTGTTTTTGGTTAAAT+TGG	+	chr3_3:75397100-75397119	Msa0472930:intron	25.0%
!!!	TTTTTAATTCTTTGATGACG+TGG	+	chr3_3:75397448-75397467	Msa0472930:intron	25.0%
!	AACTATGAACTAGTATTTCA+CGG	-	chr3_3:75397867-75397886	None:intergenic	25.0%
!!!	ACAGTTTTTTCTATCTAGTT+TGG	-	chr3_3:75398222-75398241	None:intergenic	25.0%
!!	GTAAAGATTTGAGATCAATT+TGG	-	chr3_3:75398291-75398310	None:intergenic	25.0%
!!	ATTTTCTGATGTAATCTTTC+AGG	+	chr3_3:75398362-75398381	Msa0472930:intron	25.0%
!	AACAAGTAAAAATAAGAACG+GGG	+	chr3_3:75398485-75398504	Msa0472930:CDS	25.0%
!	GTCCTTAATGTTTAATCTTA+AGG	+	chr3_3:75398992-75399011	Msa0472930:CDS	25.0%
!	AAAACCTGACAAAAAAACAT+TGG	-	chr3_3:75399567-75399586	None:intergenic	25.0%
!	ACGAGAATTTTGTAATTGAC+CGG	-	chr3_3:75396795-75396814	None:intergenic	30.0%
	TTAACATCAACAGAAACTCA+GGG	-	chr3_3:75397128-75397147	None:intergenic	30.0%
	TTTAACATCAACAGAAACTC+AGG	-	chr3_3:75397129-75397148	None:intergenic	30.0%
	AATTAAATTAGCACATTGCG+TGG	+	chr3_3:75397147-75397166	Msa0472930:intron	30.0%
!!!	ATAGGTTTTGGATTTTGCAA+AGG	+	chr3_3:75397206-75397225	Msa0472930:intron	30.0%
	CAACTGGCTAATTTAAACTA+CGG	-	chr3_3:75397250-75397269	None:intergenic	30.0%
	TATTGTATCGTAATTGAGTC+CGG	+	chr3_3:75397288-75397307	Msa0472930:intron	30.0%
	GAAAATCCAAAACATATACC+CGG	-	chr3_3:75397310-75397329	None:intergenic	30.0%
!!	GTTTTGGATTTTCCAAAAGA+TGG	+	chr3_3:75397317-75397336	Msa0472930:intron	30.0%
!	GATTTTCCAAAAGATGGATA+CGG	+	chr3_3:75397323-75397342	Msa0472930:intron	30.0%
!	ATTTTCCAAAAGATGGATAC+GGG	+	chr3_3:75397324-75397343	Msa0472930:intron	30.0%
	TATCATTGTTGTCGTTATCT+TGG	+	chr3_3:75397515-75397534	Msa0472930:intron	30.0%
	TATCTTGGAATTTATGACCA+AGG	+	chr3_3:75397530-75397549	Msa0472930:intron	30.0%
!!	ACCAAGGATATTGTTATTTG+TGG	+	chr3_3:75397546-75397565	Msa0472930:intron	30.0%
	ACCACAAATAACAATATCCT+TGG	-	chr3_3:75397550-75397569	None:intergenic	30.0%
	AATGAAACCAATCCTAACTT+TGG	-	chr3_3:75397601-75397620	None:intergenic	30.0%
	GGAAATCAACTCTTAATGTT+TGG	+	chr3_3:75397697-75397716	Msa0472930:intron	30.0%
!	TGTTTGGAACTTATTGAAAC+TGG	+	chr3_3:75397713-75397732	Msa0472930:intron	30.0%
	GAACTTATTGAAACTGGAAT+GGG	+	chr3_3:75397719-75397738	Msa0472930:intron	30.0%
	TATTGCTATGAAATATGGAG+AGG	-	chr3_3:75397815-75397834	None:intergenic	30.0%
	ACTATGAACTAGTATTTCAC+GGG	-	chr3_3:75397866-75397885	None:intergenic	30.0%
!!	TACCAATTTATCTCTGAAAC+TGG	-	chr3_3:75398162-75398181	None:intergenic	30.0%
!	AACTGTAGTATTTGGAATTC+AGG	+	chr3_3:75398236-75398255	Msa0472930:intron	30.0%
!	ACTGTAGTATTTGGAATTCA+GGG	+	chr3_3:75398237-75398256	Msa0472930:intron	30.0%
	ATGAAAATCGTAACAAGTAC+AGG	-	chr3_3:75398330-75398349	None:intergenic	30.0%
	ATGGAAAGACGTAATTATCA+AGG	+	chr3_3:75398461-75398480	Msa0472930:CDS	30.0%
!	AAATGTAAAGGCACAAAATG+TGG	+	chr3_3:75398653-75398672	Msa0472930:CDS	30.0%
	AGTCCGTATTATTTGAAAAC+TGG	+	chr3_3:75398934-75398953	Msa0472930:CDS	30.0%
	GTCCGTATTATTTGAAAACT+GGG	+	chr3_3:75398935-75398954	Msa0472930:CDS	30.0%
	TCCGTATTATTTGAAAACTG+GGG	+	chr3_3:75398936-75398955	Msa0472930:CDS	30.0%
!	ACCCCAGTTTTCAAATAATA+CGG	-	chr3_3:75398940-75398959	None:intergenic	30.0%
!	AATTGATCAGTAGTAGCTTT+TGG	-	chr3_3:75399179-75399198	None:intergenic	30.0%
	ACTACTGATCAATTTAAGTG+TGG	+	chr3_3:75399185-75399204	Msa0472930:CDS	30.0%
	AGTACTAACAAAACTTCCAA+CGG	-	chr3_3:75399307-75399326	None:intergenic	30.0%
!!!	GTTTTTTTGTCAGGTTTTAC+TGG	+	chr3_3:75399569-75399588	Msa0472930:three_prime_UTR	30.0%
!	TTATCAAATAAGTTGGGACT+TGG	-	chr3_3:75399611-75399630	None:intergenic	30.0%
	TATCAAATATATGAGCCCTT+TGG	+	chr3_3:75399728-75399747	Msa0472930:three_prime_UTR	30.0%
	ATCAAATATATGAGCCCTTT+GGG	+	chr3_3:75399729-75399748	Msa0472930:three_prime_UTR	30.0%
	ACTAAATAGTACAACCCAAA+GGG	-	chr3_3:75399746-75399765	None:intergenic	30.0%
	TACTAAATAGTACAACCCAA+AGG	-	chr3_3:75399747-75399766	None:intergenic	30.0%
!!	TTTGGGTTGTACTATTTAGT+AGG	+	chr3_3:75399746-75399765	Msa0472930:three_prime_UTR	30.0%
!	TTGGGTTGTACTATTTAGTA+GGG	+	chr3_3:75399747-75399766	Msa0472930:three_prime_UTR	30.0%
	AGAAAAGGAAGAGCAATTAT+GGG	-	chr3_3:75399780-75399799	None:intergenic	30.0%
	TAGAAAAGGAAGAGCAATTA+TGG	-	chr3_3:75399781-75399800	None:intergenic	30.0%
	GTATCATCTCTTTCAACCTT+AGG	+	chr3_3:75396442-75396461	Msa0472930:five_prime_UTR	35.0%
	AAACAAGAGAAAAGGACCTA+AGG	-	chr3_3:75396461-75396480	None:intergenic	35.0%
	GAGAAACGAAACAAGAGAAA+AGG	-	chr3_3:75396469-75396488	None:intergenic	35.0%
	CAGAGATTTGATATTCAGAG+TGG	-	chr3_3:75396549-75396568	None:intergenic	35.0%
!	TGAACAGCTCAAGAATTTTC+CGG	+	chr3_3:75396773-75396792	Msa0472930:CDS	35.0%
	GTTGTTAGGGTTCAATTCAA+AGG	+	chr3_3:75396946-75396965	Msa0472930:intron	35.0%
	TTAGGGTTCAATTCAAAGGA+AGG	+	chr3_3:75396950-75396969	Msa0472930:intron	35.0%
	TAGGGTTCAATTCAAAGGAA+GGG	+	chr3_3:75396951-75396970	Msa0472930:intron	35.0%
!!	GAGCTGTGTTGTTCAATTTT+AGG	+	chr3_3:75397079-75397098	Msa0472930:intron	35.0%
	CACATTGCGTGGATATATAT+GGG	+	chr3_3:75397158-75397177	Msa0472930:intron	35.0%
!	TATTGAACCGTAATTGACTC+TGG	+	chr3_3:75397181-75397200	Msa0472930:intron	35.0%
!	ATTGAACCGTAATTGACTCT+GGG	+	chr3_3:75397182-75397201	Msa0472930:intron	35.0%
!!	GTTTTGGATTTTGCAAAGGA+TGG	+	chr3_3:75397210-75397229	Msa0472930:intron	35.0%
!	GATTTTGCAAAGGATGGATA+CGG	+	chr3_3:75397216-75397235	Msa0472930:intron	35.0%
!	ATTTTGCAAAGGATGGATAC+GGG	+	chr3_3:75397217-75397236	Msa0472930:intron	35.0%
	GTTTAAATTAGCCAGTTGCA+TGG	+	chr3_3:75397252-75397271	Msa0472930:intron	35.0%
	ATTGTATCGTAATTGAGTCC+GGG	+	chr3_3:75397289-75397308	Msa0472930:intron	35.0%
!!!	GCAGTTCACTTTTTCTTTGT+CGG	+	chr3_3:75397481-75397500	Msa0472930:intron	35.0%
!!!	CAGTTCACTTTTTCTTTGTC+GGG	+	chr3_3:75397482-75397501	Msa0472930:intron	35.0%
!!!	AGTTCACTTTTTCTTTGTCG+GGG	+	chr3_3:75397483-75397502	Msa0472930:intron	35.0%
	AAATGACAGCTAGTTGTGTT+TGG	+	chr3_3:75397570-75397589	Msa0472930:intron	35.0%
	TGTTTGGATTCACCAAAGTT+AGG	+	chr3_3:75397586-75397605	Msa0472930:intron	35.0%
!	GAAAAAACTATAACGGGATC+TGG	-	chr3_3:75397660-75397679	None:intergenic	35.0%
	GGAACTTATTGAAACTGGAA+TGG	+	chr3_3:75397718-75397737	Msa0472930:intron	35.0%
	AAATATGGAGAGGATACGTT+AGG	-	chr3_3:75397805-75397824	None:intergenic	35.0%
!!!	TACCGCTTTTTTGGTTTTTG+TGG	+	chr3_3:75397913-75397932	Msa0472930:intron	35.0%
	AGCCACAAAAACCAAAAAAG+CGG	-	chr3_3:75397918-75397937	None:intergenic	35.0%
	CCATAAGCAAGGTTCATAAA+TGG	-	chr3_3:75397947-75397966	None:intergenic	35.0%
	CCATTTATGAACCTTGCTTA+TGG	+	chr3_3:75397944-75397963	Msa0472930:intron	35.0%
	GTGAGTATGCTTGTAAGAAA+AGG	-	chr3_3:75397973-75397992	None:intergenic	35.0%
	GATTCAGCAACAAGAAATTG+TGG	-	chr3_3:75398000-75398019	None:intergenic	35.0%
	TGCCAGTTTCAGAGATAAAT+TGG	+	chr3_3:75398157-75398176	Msa0472930:intron	35.0%
	TTCTGATGTAATCTTTCAGG+TGG	+	chr3_3:75398365-75398384	Msa0472930:intron	35.0%
!	TCTGATGTAATCTTTCAGGT+GGG	+	chr3_3:75398366-75398385	Msa0472930:intron	35.0%
!!	CTGTTGACTTAATTGCGATA+TGG	+	chr3_3:75398442-75398461	Msa0472930:CDS	35.0%
	TTGATCATAGTCTTCAGCTT+TGG	-	chr3_3:75398780-75398799	None:intergenic	35.0%
!	TTTAGCTAAGGTCTTTGAAG+AGG	+	chr3_3:75398848-75398867	Msa0472930:CDS	35.0%
!	AAACTTTTCTCCGGAAATCA+GGG	-	chr3_3:75399028-75399047	None:intergenic	35.0%
!	AAAACTTTTCTCCGGAAATC+AGG	-	chr3_3:75399029-75399048	None:intergenic	35.0%
!	TACCAAGCAAAACTTTTCTC+CGG	-	chr3_3:75399037-75399056	None:intergenic	35.0%
	CTGATCAATTTAAGTGTGGT+CGG	+	chr3_3:75399189-75399208	Msa0472930:CDS	35.0%
!	AGTTTGCATTTGGTAATAGG+TGG	-	chr3_3:75399231-75399250	None:intergenic	35.0%
!!!	TGGAAGTTTTGTTAGTACTG+TGG	+	chr3_3:75399308-75399327	Msa0472930:exon	35.0%
	TTTGTTAGTACTGTGGTGAT+TGG	+	chr3_3:75399315-75399334	Msa0472930:exon	35.0%
	CAGTCTGAACAGAAAAATTC+TGG	-	chr3_3:75399429-75399448	None:intergenic	35.0%
!!!	TGCACCAATGTTTTTTTGTC+AGG	+	chr3_3:75399560-75399579	Msa0472930:three_prime_UTR	35.0%
!	GTTTTACTGGTGATTCAGAA+TGG	+	chr3_3:75399582-75399601	Msa0472930:three_prime_UTR	35.0%
	TCAACTAATGCTCTTGCATT+TGG	-	chr3_3:75399675-75399694	None:intergenic	35.0%
!	CATGTCAAAGCGTTTAGAAA+AGG	-	chr3_3:75399795-75399814	None:intergenic	35.0%
	GAAGGAGAAAGAGAAAGAGT+TGG	+	chr3_3:75396659-75396678	Msa0472930:CDS	40.0%
	CAAAATTCTCGTCAATACCC+AGG	+	chr3_3:75396803-75396822	Msa0472930:CDS	40.0%
	GCACATTGCGTGGATATATA+TGG	+	chr3_3:75397157-75397176	Msa0472930:intron	40.0%
	CCTATACCCAGAGTCAATTA+CGG	-	chr3_3:75397191-75397210	None:intergenic	40.0%
!	TTGACTCTGGGTATAGGTTT+TGG	+	chr3_3:75397194-75397213	Msa0472930:intron	40.0%
	TATCCTGATATCCATGCAAC+TGG	-	chr3_3:75397266-75397285	None:intergenic	40.0%
!	TTGAGTCCGGGTATATGTTT+TGG	+	chr3_3:75397301-75397320	Msa0472930:intron	40.0%
!!!	GTTCACTTTTTCTTTGTCGG+GGG	+	chr3_3:75397484-75397503	Msa0472930:intron	40.0%
!!!	TTCACTTTTTCTTTGTCGGG+GGG	+	chr3_3:75397485-75397504	Msa0472930:intron	40.0%
	GGATTCACCAAAGTTAGGAT+TGG	+	chr3_3:75397591-75397610	Msa0472930:intron	40.0%
	ACCAAAAAAGCGGTATAGTG+TGG	-	chr3_3:75397908-75397927	None:intergenic	40.0%
	AGAAAAGGAAGCCATAAGCA+AGG	-	chr3_3:75397958-75397977	None:intergenic	40.0%
	TGACTCAACCTTAGAATCAG+AGG	-	chr3_3:75398511-75398530	None:intergenic	40.0%
!	TCTAAGGTTGAGTCAACGAA+TGG	+	chr3_3:75398516-75398535	Msa0472930:CDS	40.0%
	CTAAGGTTGAGTCAACGAAT+GGG	+	chr3_3:75398517-75398536	Msa0472930:CDS	40.0%
	TAAGGTTGAGTCAACGAATG+GGG	+	chr3_3:75398518-75398537	Msa0472930:CDS	40.0%
	CCAAGGTGGAGAAAGTTAAT+GGG	+	chr3_3:75398604-75398623	Msa0472930:CDS	40.0%
	GTGGAGAAAGTTAATGGGAA+TGG	+	chr3_3:75398609-75398628	Msa0472930:CDS	40.0%
!	ATTTTCTTTGCCGCAGATAC+TGG	-	chr3_3:75398735-75398754	None:intergenic	40.0%
!	ATCATAGTCTTCAGCTTTGG+TGG	-	chr3_3:75398777-75398796	None:intergenic	40.0%
	ATTCAGCGCGAGACAAAATA+AGG	+	chr3_3:75398808-75398827	Msa0472930:CDS	40.0%
	TTCAGCGCGAGACAAAATAA+GGG	+	chr3_3:75398809-75398828	Msa0472930:CDS	40.0%
!	AGACCTTAGCTAAAGCATCT+CGG	-	chr3_3:75398842-75398861	None:intergenic	40.0%
	AGAGGCAGATGAAGATATGA+TGG	+	chr3_3:75398866-75398885	Msa0472930:CDS	40.0%
!	GGACCTATACTTGACCTTTT+GGG	-	chr3_3:75398976-75398995	None:intergenic	40.0%
!	AGGACCTATACTTGACCTTT+TGG	-	chr3_3:75398977-75398996	None:intergenic	40.0%
	ATCAGAAGAACCCTGATTTC+CGG	+	chr3_3:75399015-75399034	Msa0472930:CDS	40.0%
!	TTCCGGAGAAAAGTTTTGCT+TGG	+	chr3_3:75399032-75399051	Msa0472930:CDS	40.0%
!	GCGAGTTTGCATTTGGTAAT+AGG	-	chr3_3:75399234-75399253	None:intergenic	40.0%
	CAAGTGACATAGGTTGTCAT+AGG	-	chr3_3:75399269-75399288	None:intergenic	40.0%
	GCAGTTAACACAAGTGACAT+AGG	-	chr3_3:75399279-75399298	None:intergenic	40.0%
	TGTATGAACGTGTGATGTCA+TGG	+	chr3_3:75399377-75399396	Msa0472930:three_prime_UTR	40.0%
	AGAGTGGAAACTCACGAGAA+TGG	-	chr3_3:75396533-75396552	None:intergenic	45.0%
!	GGTTTTCGTGTAACAGAGAG+TGG	+	chr3_3:75396622-75396641	Msa0472930:intron	45.0%
	TTCGTGTAACAGAGAGTGGT+TGG	+	chr3_3:75396626-75396645	Msa0472930:intron	45.0%
	TCGTGTAACAGAGAGTGGTT+GGG	+	chr3_3:75396627-75396646	Msa0472930:intron	45.0%
	TTCTTCGCTGGGACTATCAT+CGG	-	chr3_3:75396733-75396752	None:intergenic	45.0%
!	CCGTAATTGACTCTGGGTAT+AGG	+	chr3_3:75397188-75397207	Msa0472930:intron	45.0%
	TAGCCAGTTGCATGGATATC+AGG	+	chr3_3:75397260-75397279	Msa0472930:intron	45.0%
!	CCATACCCGTATCCATCTTT+TGG	-	chr3_3:75397332-75397351	None:intergenic	45.0%
	CCAAAAGATGGATACGGGTA+TGG	+	chr3_3:75397329-75397348	Msa0472930:intron	45.0%
	CCTACACTAACCCTCAGTAA+CGG	-	chr3_3:75397357-75397376	None:intergenic	45.0%
!!!	GCCACACTATACCGCTTTTT+TGG	+	chr3_3:75397904-75397923	Msa0472930:intron	45.0%
	GCAAAAGAGTCCTTCAGTGA+AGG	+	chr3_3:75398563-75398582	Msa0472930:CDS	45.0%
	CCTTTCTCAACCTTCACTGA+AGG	-	chr3_3:75398576-75398595	None:intergenic	45.0%
	CCTTCAGTGAAGGTTGAGAA+AGG	+	chr3_3:75398573-75398592	Msa0472930:CDS	45.0%
!!	TGAGAAAGGAGAAAGTGCCA+AGG	+	chr3_3:75398587-75398606	Msa0472930:CDS	45.0%
	GCCAAGGTGGAGAAAGTTAA+TGG	+	chr3_3:75398603-75398622	Msa0472930:CDS	45.0%
	CCCATTAACTTTCTCCACCT+TGG	-	chr3_3:75398607-75398626	None:intergenic	45.0%
!!	GCTGAGCTCTGGAAATGTAA+AGG	+	chr3_3:75398641-75398660	Msa0472930:CDS	45.0%
	TACCTCGAACATCAAAGCGA+AGG	+	chr3_3:75398701-75398720	Msa0472930:CDS	45.0%
	GGAGGAAAAACCAGTATCTG+CGG	+	chr3_3:75398722-75398741	Msa0472930:CDS	45.0%
	TCTCCGAGATGCTTTAGCTA+AGG	+	chr3_3:75398836-75398855	Msa0472930:CDS	45.0%
	GAAAACTGGGGTCCTTCAAA+TGG	+	chr3_3:75398948-75398967	Msa0472930:CDS	45.0%
	TCCTTCAAATGGAGCCCAAA+AGG	+	chr3_3:75398959-75398978	Msa0472930:CDS	45.0%
!	ACCTTTTGGGCTCCATTTGA+AGG	-	chr3_3:75398963-75398982	None:intergenic	45.0%
	GAGCCCAAAAGGTCAAGTAT+AGG	+	chr3_3:75398970-75398989	Msa0472930:CDS	45.0%
	CATTTCTGCTGAGCTCATGA+CGG	-	chr3_3:75399081-75399100	None:intergenic	45.0%
	CAGAAATGGCTAGTGAGCAA+AGG	+	chr3_3:75399093-75399112	Msa0472930:CDS	45.0%
	CAATTTAAGTGTGGTCGGTG+TGG	+	chr3_3:75399194-75399213	Msa0472930:CDS	45.0%
	GTGTTAACTGCAACAACCGT+TGG	+	chr3_3:75399288-75399307	Msa0472930:CDS	45.0%
	ATGAACGTGTGATGTCATGG+CGG	+	chr3_3:75399380-75399399	Msa0472930:three_prime_UTR	45.0%
!!	ATTCTGGTGCTACAGTAGAG+CGG	-	chr3_3:75399413-75399432	None:intergenic	45.0%
!	AGAGTGTTCCAAGATCGGAT+GGG	-	chr3_3:75399700-75399719	None:intergenic	45.0%
!	TAGAGTGTTCCAAGATCGGA+TGG	-	chr3_3:75399701-75399720	None:intergenic	45.0%
!!	GCTCTAGAGTGTTCCAAGAT+CGG	-	chr3_3:75399705-75399724	None:intergenic	45.0%
	ATGGTGCCTGTTGTGTTCTG+CGG	-	chr3_3:75396514-75396533	None:intergenic	50.0%
	GCAAAGGATGGATACGGGTA+AGG	+	chr3_3:75397222-75397241	Msa0472930:intron	50.0%
!	CCGTTACTGAGGGTTAGTGT+AGG	+	chr3_3:75397354-75397373	Msa0472930:intron	50.0%
	AAACTCTCACCAAGCATCCC+AGG	+	chr3_3:75398400-75398419	Msa0472930:CDS	50.0%
	AACTCTCACCAAGCATCCCA+GGG	+	chr3_3:75398401-75398420	Msa0472930:CDS	50.0%
	AATGTTCTCCCTGGGATGCT+TGG	-	chr3_3:75398412-75398431	None:intergenic	50.0%
	AGCATCCCAGGGAGAACATT+CGG	+	chr3_3:75398412-75398431	Msa0472930:CDS	50.0%
	AAAGCCCGAATGTTCTCCCT+GGG	-	chr3_3:75398420-75398439	None:intergenic	50.0%
	AAAAGCCCGAATGTTCTCCC+TGG	-	chr3_3:75398421-75398440	None:intergenic	50.0%
	AATGGGGAGAGAGCTAAAGC+TGG	+	chr3_3:75398534-75398553	Msa0472930:CDS	50.0%
	ATGGGGAGAGAGCTAAAGCT+GGG	+	chr3_3:75398535-75398554	Msa0472930:CDS	50.0%
!!	GAAAGGAGAAAGTGCCAAGG+TGG	+	chr3_3:75398590-75398609	Msa0472930:CDS	50.0%
	GGTTCATCAAAGCTGAGCTC+TGG	+	chr3_3:75398630-75398649	Msa0472930:CDS	50.0%
	CTCCTTCGCTTTGATGTTCG+AGG	-	chr3_3:75398706-75398725	None:intergenic	50.0%
	CTCGAACATCAAAGCGAAGG+AGG	+	chr3_3:75398704-75398723	Msa0472930:CDS	50.0%
	TGCATGTGACCCTATTCGTG+TGG	+	chr3_3:75398899-75398918	Msa0472930:CDS	50.0%
	CTGTCACTGCCACACGAATA+GGG	-	chr3_3:75398911-75398930	None:intergenic	50.0%
	ACTGTCACTGCCACACGAAT+AGG	-	chr3_3:75398912-75398931	None:intergenic	50.0%
	TATTCGTGTGGCAGTGACAG+TGG	+	chr3_3:75398911-75398930	Msa0472930:CDS	50.0%
	TTGGTACTGTTGAGCCACAG+CGG	+	chr3_3:75399051-75399070	Msa0472930:CDS	50.0%
	CGTCATGAGCTCAGCAGAAA+TGG	+	chr3_3:75399079-75399098	Msa0472930:CDS	50.0%
	CAGCACTGCGAGTTTGCATT+TGG	-	chr3_3:75399241-75399260	None:intergenic	50.0%
	AGTTGAGTCCCATCCGATCT+TGG	+	chr3_3:75399689-75399708	Msa0472930:three_prime_UTR	50.0%
	CAGAGAGTGGTTGGGTTCGA+TGG	+	chr3_3:75396635-75396654	Msa0472930:intron	55.0%
	GTGGTTGGGTTCGATGGAGA+AGG	+	chr3_3:75396641-75396660	Msa0472930:exon	55.0%
	GTACGAAGCCGCGAAGAAAG+CGG	+	chr3_3:75396689-75396708	Msa0472930:CDS	55.0%
	TTCGCTGGGACTATCATCGG+TGG	-	chr3_3:75396730-75396749	None:intergenic	55.0%
!	AGGCAACGGGTTTCTTCGCT+GGG	-	chr3_3:75396744-75396763	None:intergenic	55.0%
	TTCAAGCGCATCGAGGCAAC+GGG	-	chr3_3:75396757-75396776	None:intergenic	55.0%
	GTTCAAGCGCATCGAGGCAA+CGG	-	chr3_3:75396758-75396777	None:intergenic	55.0%
	TGAGCTGTTCAAGCGCATCG+AGG	-	chr3_3:75396764-75396783	None:intergenic	55.0%
	GGGTATGGCACCGTTACTGA+GGG	+	chr3_3:75397344-75397363	Msa0472930:intron	55.0%
!	CTGAGGGTTAGTGTAGGCGT+TGG	+	chr3_3:75397360-75397379	Msa0472930:intron	55.0%
	TTTCTTTGTCGGGGGGCAGA+AGG	+	chr3_3:75397492-75397511	Msa0472930:intron	55.0%
	GCATCCCAGGGAGAACATTC+GGG	+	chr3_3:75398413-75398432	Msa0472930:CDS	55.0%
	GAACGGGGCCTCTGATTCTA+AGG	+	chr3_3:75398500-75398519	Msa0472930:CDS	55.0%
!	GCTTTGTTCGACTGTGAGCG+TGG	+	chr3_3:75399146-75399165	Msa0472930:CDS	55.0%
	AGTGTGGTCGGTGTGGACAA+AGG	+	chr3_3:75399201-75399220	Msa0472930:CDS	55.0%
!!	TTCTGCGGCTGCGGTGTTGT+TGG	-	chr3_3:75396499-75396518	None:intergenic	60.0%
	CCTGTTGTGTTCTGCGGCTG+CGG	-	chr3_3:75396508-75396527	None:intergenic	60.0%
!	AGCATCCGCCGCTTTCTTCG+CGG	-	chr3_3:75396700-75396719	None:intergenic	60.0%
	GGGACTATCATCGGTGGAGG+TGG	-	chr3_3:75396724-75396743	None:intergenic	60.0%
	GCTGGGACTATCATCGGTGG+AGG	-	chr3_3:75396727-75396746	None:intergenic	60.0%
!	GAGGCAACGGGTTTCTTCGC+TGG	-	chr3_3:75396745-75396764	None:intergenic	60.0%
	CGGGTATGGCACCGTTACTG+AGG	+	chr3_3:75397343-75397362	Msa0472930:intron	60.0%
	TACTGTTGAGCCACAGCGGC+TGG	+	chr3_3:75399055-75399074	Msa0472930:CDS	60.0%
!	GGTGCTACAGTAGAGCGGTG+TGG	-	chr3_3:75399408-75399427	None:intergenic	60.0%
	CCGCAGCCGCAGAACACAAC+AGG	+	chr3_3:75396505-75396524	Msa0472930:five_prime_UTR	65.0%
	CGAAGCCGCGAAGAAAGCGG+CGG	+	chr3_3:75396692-75396711	Msa0472930:CDS	65.0%
	CTTTGGTGGAGCAGCAGCGC+TGG	-	chr3_3:75398763-75398782	None:intergenic	65.0%
	CTCATGACGGCCAGCCGCTG+TGG	-	chr3_3:75399068-75399087	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_3	gene	75396431	75399818	75396431	ID=Msa0472930;Name=Msa0472930
chr3_3	mRNA	75396431	75399818	75396431	ID=Msa0472930-mRNA-1;Parent=Msa0472930;Name=Msa0472930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=123\|1\|1\|1\|1\|1\|3\|496\|369
chr3_3	exon	75396431	75396537	75396431	ID=Msa0472930-mRNA-1:exon:19536;Parent=Msa0472930-mRNA-1
chr3_3	exon	75396638	75396824	75396638	ID=Msa0472930-mRNA-1:exon:19537;Parent=Msa0472930-mRNA-1
chr3_3	exon	75398384	75399818	75398384	ID=Msa0472930-mRNA-1:exon:19538;Parent=Msa0472930-mRNA-1
chr3_3	five_prime_UTR	75396431	75396537	75396431	ID=Msa0472930-mRNA-1:five_prime_utr;Parent=Msa0472930-mRNA-1
chr3_3	five_prime_UTR	75396638	75396653	75396638	ID=Msa0472930-mRNA-1:five_prime_utr;Parent=Msa0472930-mRNA-1
chr3_3	CDS	75396654	75396824	75396654	ID=Msa0472930-mRNA-1:cds;Parent=Msa0472930-mRNA-1
chr3_3	CDS	75398384	75399322	75398384	ID=Msa0472930-mRNA-1:cds;Parent=Msa0472930-mRNA-1
chr3_3	three_prime_UTR	75399323	75399818	75399323	ID=Msa0472930-mRNA-1:three_prime_utr;Parent=Msa0472930-mRNA-1

Gene Sequence

>Msa0472930

ATGGAGAAGGAGAAAGAGAAAGAGTTGGTCGAATTGTACGAAGCCGCGAAGAAAGCGGCGGATGCTTCCACCTCCACCGATGATAGTCCCAGCGAAGAAACCCGTTGCCTCGATGCGCTTGAACAGCTCAAGAATTTTCCGGTCAATTACAAAATTCTCGTCAATACCCAGGTGGGAAAACATCTTAAAACTCTCACCAAGCATCCCAGGGAGAACATTCGGGCTTTTGCTGTTGACTTAATTGCGATATGGAAAGACGTAATTATCAAGGAAACAAGTAAAAATAAGAACGGGGCCTCTGATTCTAAGGTTGAGTCAACGAATGGGGAGAGAGCTAAAGCTGGGAAATTGCAAAAGAGTCCTTCAGTGAAGGTTGAGAAAGGAGAAAGTGCCAAGGTGGAGAAAGTTAATGGGAATGGTTCATCAAAGCTGAGCTCTGGAAATGTAAAGGCACAAAATGTGGATGTCAAAATTGAGAAAACTGATCGTACCTCGAACATCAAAGCGAAGGAGGAAAAACCAGTATCTGCGGCAAAGAAAATTTCATCCAGCGCTGCTGCTCCACCAAAGCTGAAGACTATGATCAAATCTAACGATTCAGCGCGAGACAAAATAAGGGAACTTCTCCGAGATGCTTTAGCTAAGGTCTTTGAAGAGGCAGATGAAGATATGATGGATGAAGTGAATGCATGTGACCCTATTCGTGTGGCAGTGACAGTGGAGTCCGTATTATTTGAAAACTGGGGTCCTTCAAATGGAGCCCAAAAGGTCAAGTATAGGTCCTTAATGTTTAATCTTAAGGATCAGAAGAACCCTGATTTCCGGAGAAAAGTTTTGCTTGGTACTGTTGAGCCACAGCGGCTGGCCGTCATGAGCTCAGCAGAAATGGCTAGTGAGCAAAGGAAGCAAGAGAATGAGAAAATCGAGCAGAAAGCTTTGTTCGACTGTGAGCGTGGACTTCAACCAAAAGCTACTACTGATCAATTTAAGTGTGGTCGGTGTGGACAAAGGAAAACCACCTATTACCAAATGCAAACTCGCAGTGCTGATGAACCTATGACAACCTATGTCACTTGTGTTAACTGCAACAACCGTTGGAAGTTTTGTTAG

Protein sequence

>Msa0472930

MEKEKEKELVELYEAAKKAADASTSTDDSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKHPRENIRAFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVEKGESAKVEKVNGNGSSKLSSGNVKAQNVDVKIEKTDRTSNIKAKEEKPVSAAKKISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNACDPIRVAVTVESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQRKQENEKIEQKALFDCERGLQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNRWKFC*