Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192730 | PNY15103.1 | 77.032 | 283 | 37 | 1 | 151 | 405 | 2 | 284 | 7.12e-153 | 443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192730 | sp|F4JNX3|CMKMT_ARATH | 64.103 | 195 | 68 | 1 | 210 | 404 | 109 | 301 | 7.81e-89 | 274 |
| Msa1192730 | sp|F4JNX3|CMKMT_ARATH | 55.046 | 109 | 39 | 2 | 5 | 110 | 4 | 105 | 1.15e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1192730 | 0.802035 | 6.789833e-49 | -8.615850e-47 |
| Msa0157290 | Msa1192730 | 0.801137 | 1.037453e-48 | -8.615850e-47 |
| Msa0476110 | Msa1192730 | 0.802704 | 4.945469e-49 | -8.615850e-47 |
| Msa1192730 | Msa1283860 | 0.810943 | 8.963263e-51 | -8.615850e-47 |
| Msa1192730 | Msa1324780 | 0.807175 | 5.746378e-50 | -8.615850e-47 |
| Msa1192730 | Msa1378760 | 0.800430 | 1.446503e-48 | -8.615850e-47 |
| Msa1192730 | Msa1429150 | 0.806051 | 9.923142e-50 | -8.615850e-47 |
| Msa1192730 | Msa1438970 | 0.800328 | 1.517342e-48 | -8.615850e-47 |
| Msa0533070 | Msa1192730 | 0.800842 | 1.192119e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192730 | MtrunA17_Chr8g0371751 | 96.954 | 197 | 6 | 0 | 209 | 405 | 121 | 317 | 8.29e-141 | 404 |
| Msa1192730 | MtrunA17_Chr8g0371751 | 86.441 | 118 | 8 | 2 | 1 | 110 | 1 | 118 | 1.55e-60 | 198 |
| Msa1192730 | MtrunA17_Chr7g0273091 | 31.973 | 147 | 88 | 4 | 208 | 343 | 149 | 294 | 4.38e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192730 | AT4G35987.1 | 64.103 | 195 | 68 | 1 | 210 | 404 | 109 | 301 | 7.94e-90 | 274 |
| Msa1192730 | AT4G35987.1 | 55.046 | 109 | 39 | 2 | 5 | 110 | 4 | 105 | 1.17e-29 | 117 |
Find 89 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTCATTTGTGCCTTCT+TGG | 0.088397 | 8_1:-38680375 | None:intergenic |
| CTTAGGGAAAACACAATTTC+TGG | 0.140346 | 8_1:+38677070 | Msa1192730:CDS |
| TGCAGTGCCTATTGCGACTA+TGG | 0.220178 | 8_1:-38676700 | None:intergenic |
| CCTTCTAATGCATGCTGAAT+TGG | 0.221923 | 8_1:-38676140 | None:intergenic |
| CTGGGACCTCCTTTCATTGT+TGG | 0.288697 | 8_1:+38680219 | Msa1192730:three_prime_UTR |
| GAAGCTAACTCTGGAGCATT+TGG | 0.293032 | 8_1:+38679280 | Msa1192730:CDS |
| TGATGTCCTCTGCAGGTAAT+TGG | 0.299763 | 8_1:+38677865 | Msa1192730:intron |
| AAAGTTATTGAGCTTGGTTC+TGG | 0.303422 | 8_1:+38678095 | Msa1192730:CDS |
| AAACTCATTGGACCAGTTCT+TGG | 0.305606 | 8_1:+38680014 | Msa1192730:CDS |
| AAGCTAACTCTGGAGCATTT+GGG | 0.339254 | 8_1:+38679281 | Msa1192730:CDS |
| GCAGTGACCTGTCTCATAAC+TGG | 0.342868 | 8_1:-38680145 | None:intergenic |
| TGTCACATAGAGATATATTC+AGG | 0.349449 | 8_1:+38677919 | Msa1192730:CDS |
| TCACTAGACATTTCTTCTGT+TGG | 0.357231 | 8_1:-38680279 | None:intergenic |
| ATTGAGCTTGGTTCTGGCTA+TGG | 0.376358 | 8_1:+38678101 | Msa1192730:CDS |
| GGTTCTGGCTATGGCTTGGC+TGG | 0.380102 | 8_1:+38678110 | Msa1192730:CDS |
| CTTCTAATGCATGCTGAATT+GGG | 0.404521 | 8_1:-38676139 | None:intergenic |
| CTCTGGAGCATTTGGGGATA+CGG | 0.404971 | 8_1:+38679288 | Msa1192730:CDS |
| TGAAGTCTATGAAGCTTCAT+TGG | 0.406708 | 8_1:+38679314 | Msa1192730:CDS |
| CCAATTCAGCATGCATTAGA+AGG | 0.411786 | 8_1:+38676140 | Msa1192730:CDS |
| GGTTCTTGAATGGTGCAGAT+AGG | 0.421817 | 8_1:+38680112 | Msa1192730:CDS |
| AAATTACATAAGCGTGCAAT+TGG | 0.428200 | 8_1:-38680311 | None:intergenic |
| CTTTGCAGTGAGATTATGTA+TGG | 0.428638 | 8_1:+38680527 | Msa1192730:three_prime_UTR |
| ATGTCTAGAAGAAAGTTCAT+AGG | 0.431482 | 8_1:-38680191 | None:intergenic |
| CTAGACATTTCTTCTGTTGG+AGG | 0.437437 | 8_1:-38680276 | None:intergenic |
| CTGGAATGAGGACACATTAG+TGG | 0.439096 | 8_1:+38677036 | Msa1192730:CDS |
| AGTTGAGGAGCGTGAAGGAT+TGG | 0.446983 | 8_1:-38674207 | None:intergenic |
| TATGAAGCTTCATTGGAATC+AGG | 0.447712 | 8_1:+38679321 | Msa1192730:CDS |
| ATATCATTGTTGCAAGTGAT+TGG | 0.449239 | 8_1:+38679374 | Msa1192730:CDS |
| TTTCTTCTAGACATTCTGCC+TGG | 0.455165 | 8_1:+38680200 | Msa1192730:three_prime_UTR |
| TTGCTGGCCAGAAAAGTTGC+TGG | 0.458899 | 8_1:+38676953 | Msa1192730:CDS |
| GCTTGGTTCTGGCTATGGCT+TGG | 0.461601 | 8_1:+38678106 | Msa1192730:CDS |
| GCATCTAACGGTGATGTTGC+TGG | 0.464560 | 8_1:+38676937 | Msa1192730:CDS |
| AGAAAGCTTCATCGTTAAGA+TGG | 0.469603 | 8_1:+38673913 | Msa1192730:CDS |
| CGTCATGAGGGGTTCTTGAA+TGG | 0.471374 | 8_1:+38680102 | Msa1192730:CDS |
| TCATTGCCCATAGTCGCAAT+AGG | 0.477251 | 8_1:+38676693 | Msa1192730:CDS |
| AGAACTATGACAAAGAAGTC+TGG | 0.486522 | 8_1:+38680076 | Msa1192730:CDS |
| GAGTTTGTTGAAGAAGAAGA+AGG | 0.486921 | 8_1:-38673966 | None:intergenic |
| CTCATTGGACCAGTTCTTGG+AGG | 0.500619 | 8_1:+38680017 | Msa1192730:CDS |
| TCTTCTTCTTCAACAAACTC+AGG | 0.500679 | 8_1:+38673969 | Msa1192730:CDS |
| CTTCAGCTACCTCCAAGAAC+TGG | 0.501959 | 8_1:-38680026 | None:intergenic |
| AAATACAACATTGACAACAC+TGG | 0.502442 | 8_1:+38674517 | Msa1192730:CDS |
| GTTCTTGAATGGTGCAGATA+GGG | 0.505855 | 8_1:+38680113 | Msa1192730:CDS |
| GCAGTGCCTATTGCGACTAT+GGG | 0.512847 | 8_1:-38676699 | None:intergenic |
| ATGGTGCAGATAGGGACTAT+TGG | 0.521392 | 8_1:+38680121 | Msa1192730:CDS |
| CGTAACATTGAAGCTAACTC+TGG | 0.523854 | 8_1:+38679271 | Msa1192730:CDS |
| TCCATCTGAGATTACAACCT+CGG | 0.528432 | 8_1:-38678162 | None:intergenic |
| GACTGTTCATAAAAGATAAG+TGG | 0.537752 | 8_1:+38680244 | Msa1192730:three_prime_UTR |
| AGGATACAATCAACTACTTG+TGG | 0.545485 | 8_1:-38678188 | None:intergenic |
| TATCAAGTTGAATCCATGAC+TGG | 0.549754 | 8_1:-38674124 | None:intergenic |
| CAGTGACCTGTCTCATAACT+GGG | 0.554773 | 8_1:-38680144 | None:intergenic |
| TCCGAGGTTGTAATCTCAGA+TGG | 0.555442 | 8_1:+38678161 | Msa1192730:CDS |
| AGCTAACTCTGGAGCATTTG+GGG | 0.555559 | 8_1:+38679282 | Msa1192730:CDS |
| AACAGTCAACCAACAATGAA+AGG | 0.556289 | 8_1:-38680228 | None:intergenic |
| CAATCTAACAGTGGCTGTAG+CGG | 0.556540 | 8_1:+38677001 | Msa1192730:CDS |
| CAGGCACTGAAATCAAAAGA+TGG | 0.556867 | 8_1:+38673875 | Msa1192730:exon |
| AGATTATGTATGGAAAGACT+TGG | 0.557548 | 8_1:+38680537 | Msa1192730:three_prime_UTR |
| TGTCTAGAAGAAAGTTCATA+GGG | 0.559803 | 8_1:-38680190 | None:intergenic |
| TTCTTCTAGACATTCTGCCT+GGG | 0.561415 | 8_1:+38680201 | Msa1192730:three_prime_UTR |
| AATACAACATTGACAACACT+GGG | 0.564164 | 8_1:+38674518 | Msa1192730:CDS |
| AAATGAATGTGAAGGGGATG+TGG | 0.564880 | 8_1:+38680387 | Msa1192730:three_prime_UTR |
| TGTTATTGCAGCTGTTACTG+AGG | 0.565121 | 8_1:+38678136 | Msa1192730:CDS |
| TATTGGCCCAGTTATGAGAC+AGG | 0.568174 | 8_1:+38680138 | Msa1192730:CDS |
| TAGAGAGAAGAGCGTGACGA+AGG | 0.568782 | 8_1:-38673941 | None:intergenic |
| GATTATGTATGGAAAGACTT+GGG | 0.572964 | 8_1:+38680538 | Msa1192730:three_prime_UTR |
| AAGGCACAAATGAATGTGAA+GGG | 0.575283 | 8_1:+38680380 | Msa1192730:three_prime_UTR |
| GAAGGCACAAATGAATGTGA+AGG | 0.581228 | 8_1:+38680379 | Msa1192730:three_prime_UTR |
| GCATTAGAAGGTGGAATCTG+TGG | 0.584026 | 8_1:+38676152 | Msa1192730:CDS |
| GAAGTCTGGAAGCGTCATGA+GGG | 0.584126 | 8_1:+38680090 | Msa1192730:CDS |
| CAACAATGAAAGGAGGTCCC+AGG | 0.585920 | 8_1:-38680218 | None:intergenic |
| AGTTTGTTGAAGAAGAAGAA+GGG | 0.586168 | 8_1:-38673965 | None:intergenic |
| AGCTGTTACTGAGGCATCCG+AGG | 0.587060 | 8_1:+38678145 | Msa1192730:CDS |
| CTCACCGACTACCTTGGCAT+TGG | 0.588378 | 8_1:-38676180 | None:intergenic |
| TGCTGGAAAGCGTCAGATGG+TGG | 0.595850 | 8_1:+38676970 | Msa1192730:CDS |
| AGAAGTCTGGAAGCGTCATG+AGG | 0.596564 | 8_1:+38680089 | Msa1192730:CDS |
| TTGGAGGTAGCTGAAGAACA+TGG | 0.609656 | 8_1:+38680033 | Msa1192730:CDS |
| ATTTCAAGAAGAACCAGTCA+TGG | 0.610232 | 8_1:+38674111 | Msa1192730:CDS |
| TGAGCAAGAACATCTTCTGA+TGG | 0.613117 | 8_1:-38677888 | None:intergenic |
| AAAAGAGTTGAGGAGCGTGA+AGG | 0.621499 | 8_1:-38674212 | None:intergenic |
| AGTTGCTGGAAAGCGTCAGA+TGG | 0.625280 | 8_1:+38676967 | Msa1192730:CDS |
| CTGTGGCATTGCCAATGCCA+AGG | 0.626925 | 8_1:+38676169 | Msa1192730:CDS |
| AGGGTGATTCTGATTAAGAG+TGG | 0.626994 | 8_1:-38680171 | None:intergenic |
| ATTCAGCATGCATTAGAAGG+TGG | 0.658629 | 8_1:+38676143 | Msa1192730:CDS |
| TTGTATGTAGGTGCATCTAA+CGG | 0.667574 | 8_1:+38676925 | Msa1192730:intron |
| AGGCACAAATGAATGTGAAG+GGG | 0.673008 | 8_1:+38680381 | Msa1192730:three_prime_UTR |
| GAAAATCATTGAGATCAGCA+TGG | 0.673126 | 8_1:-38674483 | None:intergenic |
| CAATTCGAGCAAGATCTCTG+TGG | 0.688833 | 8_1:-38679930 | None:intergenic |
| AAGTCTGGAAGCGTCATGAG+GGG | 0.697903 | 8_1:+38680091 | Msa1192730:CDS |
| GCCAGAAAACAATCTAACAG+TGG | 0.700100 | 8_1:+38676992 | Msa1192730:CDS |
| AGTCAACCAACAATGAAAGG+AGG | 0.701573 | 8_1:-38680225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATGCAAATATAAT+CGG | - | chr8_1:38674618-38674637 | None:intergenic | 10.0% |
| !!! | TTCTTCAATTTATTTATTTT+TGG | + | chr8_1:38675025-38675044 | Msa1192730:intron | 10.0% |
| !! | CTAATAAAAAGTAAATTAAT+TGG | + | chr8_1:38676324-38676343 | Msa1192730:intron | 10.0% |
| !!! | AGATAAAATTGTTTTTTTTT+AGG | - | chr8_1:38677699-38677718 | None:intergenic | 10.0% |
| !! | TTTATCATTAAAAATACAAA+GGG | - | chr8_1:38678372-38678391 | None:intergenic | 10.0% |
| !! | TAAATATATTGTTTATTTCA+TGG | + | chr8_1:38679601-38679620 | Msa1192730:intron | 10.0% |
| !!! | AAAGTTTTTATTCTATATTG+AGG | + | chr8_1:38674750-38674769 | Msa1192730:intron | 15.0% |
| !! | AAAAATAATAACAAGATCAA+GGG | - | chr8_1:38675002-38675021 | None:intergenic | 15.0% |
| !! | AAAAAATAATAACAAGATCA+AGG | - | chr8_1:38675003-38675022 | None:intergenic | 15.0% |
| !! | TAAAATCTATTGAGTTTAAA+TGG | + | chr8_1:38675672-38675691 | Msa1192730:intron | 15.0% |
| !!! | AGATTTTTTTTTTTTTTTGC+GGG | - | chr8_1:38676262-38676281 | None:intergenic | 15.0% |
| !!! | GAGATTTTTTTTTTTTTTTG+CGG | - | chr8_1:38676263-38676282 | None:intergenic | 15.0% |
| !!! | TCTATATTTTTTCTTTTATG+AGG | + | chr8_1:38677950-38677969 | Msa1192730:intron | 15.0% |
| !! | GTTTATCATTAAAAATACAA+AGG | - | chr8_1:38678373-38678392 | None:intergenic | 15.0% |
| !! | CCTAATTATACAATTATATA+TGG | - | chr8_1:38678912-38678931 | None:intergenic | 15.0% |
| !! | CCATATATAATTGTATAATT+AGG | + | chr8_1:38678909-38678928 | Msa1192730:intron | 15.0% |
| !!! | TGATTTTTAAAAAACATACA+TGG | + | chr8_1:38678954-38678973 | Msa1192730:intron | 15.0% |
| !! | CTATTTATAGAAAATGTTAT+TGG | - | chr8_1:38679526-38679545 | None:intergenic | 15.0% |
| !! | AAATGATAAAAAGTTAACAA+AGG | - | chr8_1:38679708-38679727 | None:intergenic | 15.0% |
| !!! | TCATTTTCAATATTTAAAGT+TGG | + | chr8_1:38679722-38679741 | Msa1192730:intron | 15.0% |
| !!! | AATAAAGTTTTAAAAATCTC+AGG | - | chr8_1:38680458-38680477 | None:intergenic | 15.0% |
| !! | TTGAGATCAAAATTGAAAAT+AGG | + | chr8_1:38674378-38674397 | Msa1192730:intron | 20.0% |
| !! | TCAAAATTGAAAATAGGAAA+TGG | + | chr8_1:38674384-38674403 | Msa1192730:intron | 20.0% |
| !!! | TATTCTCATCATTTTTTACT+CGG | + | chr8_1:38674635-38674654 | Msa1192730:intron | 20.0% |
| !! | AAAGTCTTCCTTAAAAATTT+GGG | - | chr8_1:38674862-38674881 | None:intergenic | 20.0% |
| !!! | AATTTATTTATTTTTGGCTG+TGG | + | chr8_1:38675031-38675050 | Msa1192730:intron | 20.0% |
| !!! | TAAACAAAACACTGTTTTAT+TGG | + | chr8_1:38675149-38675168 | Msa1192730:intron | 20.0% |
| !!! | TTTTTTTCTTCTTTTTCTGT+GGG | - | chr8_1:38675227-38675246 | None:intergenic | 20.0% |
| !!! | AAATTTTGTTTTCTATCTCA+TGG | + | chr8_1:38675885-38675904 | Msa1192730:intron | 20.0% |
| !! | AGTAAATTAATTGGAAATCT+TGG | + | chr8_1:38676333-38676352 | Msa1192730:intron | 20.0% |
| !! | AGTTAGAAATAATGCAAATA+GGG | - | chr8_1:38677294-38677313 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTACAGTGATA+AGG | + | chr8_1:38677350-38677369 | Msa1192730:intron | 20.0% |
| !!! | GTAGATAAAATCATCTTTTT+AGG | - | chr8_1:38677504-38677523 | None:intergenic | 20.0% |
| !! | TACAAAAAAACTTTATTCAC+TGG | + | chr8_1:38677521-38677540 | Msa1192730:intron | 20.0% |
| !!! | TTTGCTATCACTATATTTTT+TGG | + | chr8_1:38677580-38677599 | Msa1192730:intron | 20.0% |
| !!! | AAAAACTTTCTTTTATTCAC+TGG | + | chr8_1:38677724-38677743 | Msa1192730:intron | 20.0% |
| !! | TGTTAACTAATGAGTAATAA+TGG | - | chr8_1:38678503-38678522 | None:intergenic | 20.0% |
| !! | ATTTCCTACTTTAGATAATA+TGG | + | chr8_1:38678683-38678702 | Msa1192730:intron | 20.0% |
| !! | TTGTATTTAGTATTTACTTG+TGG | + | chr8_1:38678756-38678775 | Msa1192730:intron | 20.0% |
| !! | ATTAGTTATTACAAGCAAAT+TGG | + | chr8_1:38678806-38678825 | Msa1192730:intron | 20.0% |
| !!! | TTTTAAAAAACATACATGGT+TGG | + | chr8_1:38678958-38678977 | Msa1192730:intron | 20.0% |
| !!! | TTAAATATTTTCATGTCAAG+TGG | + | chr8_1:38679218-38679237 | Msa1192730:intron | 20.0% |
| !! | TTGATAAATATAAGAGTCAA+AGG | + | chr8_1:38679548-38679567 | Msa1192730:intron | 20.0% |
| !! | TGATAAATATAAGAGTCAAA+GGG | + | chr8_1:38679549-38679568 | Msa1192730:intron | 20.0% |
| !! | AAACAATATATTTAATGCTC+CGG | - | chr8_1:38679595-38679614 | None:intergenic | 20.0% |
| !! | ATATATTGTTTATTTCATGG+AGG | + | chr8_1:38679604-38679623 | Msa1192730:intron | 20.0% |
| !!! | AAATTTTTGCATTCATGTTA+TGG | + | chr8_1:38679653-38679672 | Msa1192730:intron | 20.0% |
| !!! | AATGACTAAATATTTTCAAG+TGG | + | chr8_1:38679757-38679776 | Msa1192730:intron | 20.0% |
| !! | ATCATAAAGACCAAAATAAA+AGG | - | chr8_1:38679849-38679868 | None:intergenic | 20.0% |
| !! | CTTTATATTATGACATTGAA+TGG | + | chr8_1:38679877-38679896 | Msa1192730:intron | 20.0% |
| !!! | ATATTTTTAAGTCCAAAAAG+AGG | + | chr8_1:38679991-38680010 | Msa1192730:CDS | 20.0% |
| !!! | AGAATCAATAGAAGCATTTT+GGG | - | chr8_1:38674036-38674055 | None:intergenic | 25.0% |
| !!! | AAGAATCAATAGAAGCATTT+TGG | - | chr8_1:38674037-38674056 | None:intergenic | 25.0% |
| ! | TTGTTCGTCTGAAAATAATT+GGG | - | chr8_1:38674070-38674089 | None:intergenic | 25.0% |
| ! | ATTGTTCGTCTGAAAATAAT+TGG | - | chr8_1:38674071-38674090 | None:intergenic | 25.0% |
| ! | CTTAGTTGAACATTATCTAT+TGG | + | chr8_1:38674427-38674446 | Msa1192730:intron | 25.0% |
| ! | AAGTCTTCCTTAAAAATTTG+GGG | - | chr8_1:38674861-38674880 | None:intergenic | 25.0% |
| ! | GAAAGTCTTCCTTAAAAATT+TGG | - | chr8_1:38674863-38674882 | None:intergenic | 25.0% |
| !! | AAATCACATGGTCTTTTATA+AGG | + | chr8_1:38674934-38674953 | Msa1192730:intron | 25.0% |
| !! | AATCACATGGTCTTTTATAA+GGG | + | chr8_1:38674935-38674954 | Msa1192730:intron | 25.0% |
| ! | TTATGTTCTCTTGTATTGTA+TGG | - | chr8_1:38675132-38675151 | None:intergenic | 25.0% |
| !!! | GTTTTTTTCTTCTTTTTCTG+TGG | - | chr8_1:38675228-38675247 | None:intergenic | 25.0% |
| ! | AATCACAACCAATAGAAAAA+AGG | - | chr8_1:38675443-38675462 | None:intergenic | 25.0% |
| ! | AAAAAACAAGTTGTGATACA+GGG | - | chr8_1:38675466-38675485 | None:intergenic | 25.0% |
| ! | AAAAAAACAAGTTGTGATAC+AGG | - | chr8_1:38675467-38675486 | None:intergenic | 25.0% |
| ! | ATAAAACTTTAACATGATCG+AGG | + | chr8_1:38675820-38675839 | Msa1192730:intron | 25.0% |
| ! | ACATGTAATATCAATGCATA+AGG | + | chr8_1:38675846-38675865 | Msa1192730:intron | 25.0% |
| ! | ATGGTAAAATTGTTGGAAAA+TGG | + | chr8_1:38675904-38675923 | Msa1192730:intron | 25.0% |
| ! | ATCAAGTCAATATTGGAATT+AGG | - | chr8_1:38676012-38676031 | None:intergenic | 25.0% |
| !!! | ATTCCAATATTGACTTGATT+AGG | + | chr8_1:38676013-38676032 | Msa1192730:intron | 25.0% |
| ! | AGTACAAAATCAATTGAAAG+AGG | + | chr8_1:38676363-38676382 | Msa1192730:intron | 25.0% |
| !!! | TGTAGGATTAGTTTATGTAA+TGG | + | chr8_1:38676657-38676676 | Msa1192730:intron | 25.0% |
| !!! | GTAGGATTAGTTTATGTAAT+GGG | + | chr8_1:38676658-38676677 | Msa1192730:intron | 25.0% |
| ! | GCACTAATTAAATCAAATTG+AGG | + | chr8_1:38676791-38676810 | Msa1192730:intron | 25.0% |
| !! | TTTCTGGAAAAAACAAAAGT+TGG | + | chr8_1:38677086-38677105 | Msa1192730:intron | 25.0% |
| ! | TAATGCAAATAGGGTAATTA+TGG | - | chr8_1:38677285-38677304 | None:intergenic | 25.0% |
| ! | CAGTTAGAAATAATGCAAAT+AGG | - | chr8_1:38677295-38677314 | None:intergenic | 25.0% |
| ! | AAAAAAACTTTATTCACTGG+AGG | + | chr8_1:38677524-38677543 | Msa1192730:intron | 25.0% |
| ! | AAAAAACTTTATTCACTGGA+GGG | + | chr8_1:38677525-38677544 | Msa1192730:intron | 25.0% |
| !!! | TTTTTTGGATGAAACAACAT+AGG | + | chr8_1:38677551-38677570 | Msa1192730:intron | 25.0% |
| !! | TTGGATGAATACGATTTTAT+CGG | + | chr8_1:38677599-38677618 | Msa1192730:intron | 25.0% |
| !!! | TATTGAGGTTTTTTATTCAC+TGG | + | chr8_1:38677623-38677642 | Msa1192730:intron | 25.0% |
| ! | AAAATGATGCTAATATACAG+AGG | - | chr8_1:38678023-38678042 | None:intergenic | 25.0% |
| ! | TCTAAAAAAGTTATTGAGCT+TGG | + | chr8_1:38678089-38678108 | Msa1192730:CDS | 25.0% |
| ! | TCATCAATAACTATAGCAAA+AGG | - | chr8_1:38678211-38678230 | None:intergenic | 25.0% |
| ! | TTCAATACTTGTTCTACAAA+TGG | + | chr8_1:38678287-38678306 | Msa1192730:intron | 25.0% |
| ! | AATGATAAACATGAAACAAC+TGG | + | chr8_1:38678383-38678402 | Msa1192730:intron | 25.0% |
| ! | ATTGTGAATAAAGGTCTAAA+AGG | - | chr8_1:38678427-38678446 | None:intergenic | 25.0% |
| !! | TTTTAGACCTTTATTCACAA+TGG | + | chr8_1:38678426-38678445 | Msa1192730:intron | 25.0% |
| !! | ACTTCCATATTATCTAAAGT+AGG | - | chr8_1:38678690-38678709 | None:intergenic | 25.0% |
| ! | ACATTAAATGACAAACACTT+GGG | - | chr8_1:38678718-38678737 | None:intergenic | 25.0% |
| ! | TTTAGTATTTACTTGTGGAA+AGG | + | chr8_1:38678761-38678780 | Msa1192730:intron | 25.0% |
| !!! | AACTAATTCAAGTTTTTGAG+TGG | - | chr8_1:38678793-38678812 | None:intergenic | 25.0% |
| ! | CAATTATATATGGATAGTCA+AGG | - | chr8_1:38678902-38678921 | None:intergenic | 25.0% |
| ! | AATGCTGTGTTTATTACATT+GGG | - | chr8_1:38679133-38679152 | None:intergenic | 25.0% |
| ! | TAATGCTGTGTTTATTACAT+TGG | - | chr8_1:38679134-38679153 | None:intergenic | 25.0% |
| !! | TTTTCTTTCAAAAGTTTGCA+TGG | + | chr8_1:38679166-38679185 | Msa1192730:intron | 25.0% |
| ! | TAATGAAGCATATTCTCAAA+AGG | - | chr8_1:38679201-38679220 | None:intergenic | 25.0% |
| ! | AATAAGATTGTCATCTAAGT+TGG | - | chr8_1:38679455-38679474 | None:intergenic | 25.0% |
| !!! | AATATTTTCAAGTGGAGAAA+AGG | + | chr8_1:38679765-38679784 | Msa1192730:intron | 25.0% |
| !!! | AAGCACTTGTTATCAAAAAT+AGG | + | chr8_1:38679955-38679974 | Msa1192730:CDS | 25.0% |
| !!! | ACGCTTATGTAATTTTTTGT+TGG | + | chr8_1:38680319-38680338 | Msa1192730:three_prime_UTR | 25.0% |
| !!! | CGCTTATGTAATTTTTTGTT+GGG | + | chr8_1:38680320-38680339 | Msa1192730:three_prime_UTR | 25.0% |
| !!! | GCTTATGTAATTTTTTGTTG+GGG | + | chr8_1:38680321-38680340 | Msa1192730:three_prime_UTR | 25.0% |
| !! | AGTTTGTTGAAGAAGAAGAA+GGG | - | chr8_1:38673968-38673987 | None:intergenic | 30.0% |
| TGTTCGTCTGAAAATAATTG+GGG | - | chr8_1:38674069-38674088 | None:intergenic | 30.0% | |
| !!! | GGTCAGTTTTGTTTTGTTTT+TGG | + | chr8_1:38674238-38674257 | Msa1192730:intron | 30.0% |
| GTTCAACTAAGAAACTTTGA+TGG | - | chr8_1:38674418-38674437 | None:intergenic | 30.0% | |
| AAATACAACATTGACAACAC+TGG | + | chr8_1:38674517-38674536 | Msa1192730:CDS | 30.0% | |
| AATACAACATTGACAACACT+GGG | + | chr8_1:38674518-38674537 | Msa1192730:CDS | 30.0% | |
| ! | TGAGGATAAGTCTTTTCTTT+AGG | + | chr8_1:38674768-38674787 | Msa1192730:intron | 30.0% |
| AGTCTTCCTTAAAAATTTGG+GGG | - | chr8_1:38674860-38674879 | None:intergenic | 30.0% | |
| !!! | TGCTGTTTTGGGATATTATT+AGG | + | chr8_1:38674892-38674911 | Msa1192730:intron | 30.0% |
| CTTATCTTGCATAAATCACA+TGG | + | chr8_1:38674922-38674941 | Msa1192730:intron | 30.0% | |
| !!! | TTATTTATTTTTGGCTGTGG+AGG | + | chr8_1:38675034-38675053 | Msa1192730:intron | 30.0% |
| ! | ATTGTATGGCTTTTATCAAC+TGG | - | chr8_1:38675118-38675137 | None:intergenic | 30.0% |
| AAGAAGTTATCCGAAACATT+AGG | + | chr8_1:38675249-38675268 | Msa1192730:intron | 30.0% | |
| !!! | CTCTCTTTCCTTTTTTCTAT+TGG | + | chr8_1:38675432-38675451 | Msa1192730:intron | 30.0% |
| ! | AAATTGCAGATTTGTTCCTT+AGG | - | chr8_1:38675628-38675647 | None:intergenic | 30.0% |
| AGTTACACTCGATATCAAAA+GGG | - | chr8_1:38675702-38675721 | None:intergenic | 30.0% | |
| GTGTAACTGTTTCAATAAGA+TGG | + | chr8_1:38675714-38675733 | Msa1192730:intron | 30.0% | |
| TGAAATGAACACATGATGTT+TGG | + | chr8_1:38675775-38675794 | Msa1192730:intron | 30.0% | |
| CTATCTCATGGTAAAATTGT+TGG | + | chr8_1:38675897-38675916 | Msa1192730:intron | 30.0% | |
| TAGTCATACTAAGTCAACTT+TGG | - | chr8_1:38675953-38675972 | None:intergenic | 30.0% | |
| ! | AAAGTTGACTTAGTATGACT+AGG | + | chr8_1:38675952-38675971 | Msa1192730:intron | 30.0% |
| CTTCCTAATCAAGTCAATAT+TGG | - | chr8_1:38676019-38676038 | None:intergenic | 30.0% | |
| CAAAATCAATTGAAAGAGGA+AGG | + | chr8_1:38676367-38676386 | Msa1192730:intron | 30.0% | |
| GAGAAGCTATTTATATCTGA+AGG | + | chr8_1:38676480-38676499 | Msa1192730:intron | 30.0% | |
| TCATAGCAATTAGTTGTTGT+AGG | + | chr8_1:38676640-38676659 | Msa1192730:intron | 30.0% | |
| AAATTGAGGTGATCTATGTA+GGG | + | chr8_1:38676805-38676824 | Msa1192730:intron | 30.0% | |
| ! | TGTGTTTTCCCTAAGATTTT+TGG | - | chr8_1:38677065-38677084 | None:intergenic | 30.0% |
| CTCTAGATATCAAGTTTAGT+GGG | + | chr8_1:38677166-38677185 | Msa1192730:intron | 30.0% | |
| CTGTAGCAATTATGTAGATA+AGG | + | chr8_1:38677325-38677344 | Msa1192730:intron | 30.0% | |
| ! | CGATTTTATATGCTATTGAG+TGG | + | chr8_1:38677422-38677441 | Msa1192730:intron | 30.0% |
| ! | TTTTATATGCTATTGAGTGG+AGG | + | chr8_1:38677425-38677444 | Msa1192730:intron | 30.0% |
| TTTATATGCTATTGAGTGGA+GGG | + | chr8_1:38677426-38677445 | Msa1192730:intron | 30.0% | |
| ! | AACTTTCTTTTATTCACTGG+AGG | + | chr8_1:38677727-38677746 | Msa1192730:intron | 30.0% |
| ! | ACTTTCTTTTATTCACTGGA+GGG | + | chr8_1:38677728-38677747 | Msa1192730:intron | 30.0% |
| !! | TTTTTCGGATGAAACAACAT+AGG | + | chr8_1:38677754-38677773 | Msa1192730:intron | 30.0% |
| AGGATAGTGAAAAATGTAAG+TGG | - | chr8_1:38677793-38677812 | None:intergenic | 30.0% | |
| !! | TATCCTCTTCATATTGATTC+AGG | + | chr8_1:38677807-38677826 | Msa1192730:intron | 30.0% |
| !!! | GGTCTTTTTATTTTCACAGT+TGG | + | chr8_1:38677828-38677847 | Msa1192730:intron | 30.0% |
| TGTCACATAGAGATATATTC+AGG | + | chr8_1:38677919-38677938 | Msa1192730:CDS | 30.0% | |
| ! | TAGAGATATATTCAGGTTTG+AGG | + | chr8_1:38677926-38677945 | Msa1192730:intron | 30.0% |
| ! | AGACTGGTATGATTTCTTTT+AGG | + | chr8_1:38678066-38678085 | Msa1192730:intron | 30.0% |
| CTTTGTTGAAATTTATACCC+AGG | - | chr8_1:38678338-38678357 | None:intergenic | 30.0% | |
| ATGAGTTCAAATAAGGCTTA+GGG | - | chr8_1:38678533-38678552 | None:intergenic | 30.0% | |
| AATGAGTTCAAATAAGGCTT+AGG | - | chr8_1:38678534-38678553 | None:intergenic | 30.0% | |
| CTCACAAATGAGTTCAAATA+AGG | - | chr8_1:38678540-38678559 | None:intergenic | 30.0% | |
| TATTTGAACTCATTTGTGAG+CGG | + | chr8_1:38678540-38678559 | Msa1192730:intron | 30.0% | |
| GACATTAAATGACAAACACT+TGG | - | chr8_1:38678719-38678738 | None:intergenic | 30.0% | |
| ATATCATTGTTGCAAGTGAT+TGG | + | chr8_1:38679374-38679393 | Msa1192730:CDS | 30.0% | |
| GCATCTAAGTAAGAAATTAC+AGG | - | chr8_1:38679504-38679523 | None:intergenic | 30.0% | |
| ! | TTTTGCATTCATGTTATGGT+TGG | + | chr8_1:38679657-38679676 | Msa1192730:intron | 30.0% |
| AAAGACCAAAATAAAAGGCA+AGG | - | chr8_1:38679844-38679863 | None:intergenic | 30.0% | |
| TGGACTTAAAAATATAGCCT+CGG | - | chr8_1:38679986-38680005 | None:intergenic | 30.0% | |
| TGTCTAGAAGAAAGTTCATA+GGG | - | chr8_1:38680193-38680212 | None:intergenic | 30.0% | |
| ATGTCTAGAAGAAAGTTCAT+AGG | - | chr8_1:38680194-38680213 | None:intergenic | 30.0% | |
| GACTGTTCATAAAAGATAAG+TGG | + | chr8_1:38680244-38680263 | Msa1192730:three_prime_UTR | 30.0% | |
| AAATTACATAAGCGTGCAAT+TGG | - | chr8_1:38680314-38680333 | None:intergenic | 30.0% | |
| AGATTATGTATGGAAAGACT+TGG | + | chr8_1:38680537-38680556 | Msa1192730:three_prime_UTR | 30.0% | |
| GATTATGTATGGAAAGACTT+GGG | + | chr8_1:38680538-38680557 | Msa1192730:three_prime_UTR | 30.0% | |
| !!! | ATCTTTTGATTTCAGTGCCT+GGG | - | chr8_1:38673876-38673895 | None:intergenic | 35.0% |
| AGAAAGCTTCATCGTTAAGA+TGG | + | chr8_1:38673913-38673932 | Msa1192730:CDS | 35.0% | |
| !! | GAGTTTGTTGAAGAAGAAGA+AGG | - | chr8_1:38673969-38673988 | None:intergenic | 35.0% |
| TCTTCTTCTTCAACAAACTC+AGG | + | chr8_1:38673969-38673988 | Msa1192730:CDS | 35.0% | |
| !!! | CAATAGAAGCATTTTGGGAA+TGG | - | chr8_1:38674031-38674050 | None:intergenic | 35.0% |
| ATTTCAAGAAGAACCAGTCA+TGG | + | chr8_1:38674111-38674130 | Msa1192730:CDS | 35.0% | |
| !! | TATCAAGTTGAATCCATGAC+TGG | - | chr8_1:38674127-38674146 | None:intergenic | 35.0% |
| ! | AATATTCAAGTTAGCTCCGT+TGG | + | chr8_1:38674273-38674292 | Msa1192730:intron | 35.0% |
| AATGTCTCTTAACTCACCAA+CGG | - | chr8_1:38674292-38674311 | None:intergenic | 35.0% | |
| GAAAATCATTGAGATCAGCA+TGG | - | chr8_1:38674486-38674505 | None:intergenic | 35.0% | |
| ! | GCATCTAAGATCTTCATTTC+CGG | + | chr8_1:38674581-38674600 | Msa1192730:intron | 35.0% |
| ! | CATCTAAGATCTTCATTTCC+GGG | + | chr8_1:38674582-38674601 | Msa1192730:intron | 35.0% |
| !!! | ATCATTTTTTACTCGGACTG+TGG | + | chr8_1:38674642-38674661 | Msa1192730:intron | 35.0% |
| !! | ATGCTACAGTTTGGTGTATT+AGG | + | chr8_1:38674822-38674841 | Msa1192730:intron | 35.0% |
| ! | TGTAACCCCCCAAATTTTTA+AGG | + | chr8_1:38674851-38674870 | Msa1192730:intron | 35.0% |
| GTCTTCCTTAAAAATTTGGG+GGG | - | chr8_1:38674859-38674878 | None:intergenic | 35.0% | |
| !!! | TTCTGTCTTAGTTGCTGTTT+TGG | + | chr8_1:38674880-38674899 | Msa1192730:intron | 35.0% |
| !!! | TCTGTCTTAGTTGCTGTTTT+GGG | + | chr8_1:38674881-38674900 | Msa1192730:intron | 35.0% |
| TTGGGATATTATTAGGCGAT+TGG | + | chr8_1:38674899-38674918 | Msa1192730:intron | 35.0% | |
| ACAAGTGACAGGTAACTAAA+CGG | - | chr8_1:38675062-38675081 | None:intergenic | 35.0% | |
| ! | ACTTGTTGATTGAAGCTCAA+TGG | + | chr8_1:38675076-38675095 | Msa1192730:intron | 35.0% |
| !! | CTGTTTTATTGGACAAAACC+AGG | + | chr8_1:38675160-38675179 | Msa1192730:intron | 35.0% |
| TATTGCTCTTGATATAAGCC+TGG | - | chr8_1:38675181-38675200 | None:intergenic | 35.0% | |
| TCTCAAACTGCCTAATGTTT+CGG | - | chr8_1:38675262-38675281 | None:intergenic | 35.0% | |
| AAACATTAGGCAGTTTGAGA+GGG | + | chr8_1:38675262-38675281 | Msa1192730:intron | 35.0% | |
| AGAGAGATTTCCATTATCCA+GGG | - | chr8_1:38675418-38675437 | None:intergenic | 35.0% | |
| AAGAGAGATTTCCATTATCC+AGG | - | chr8_1:38675419-38675438 | None:intergenic | 35.0% | |
| GCACTGTTTAGATTCAAAGA+AGG | + | chr8_1:38675649-38675668 | Msa1192730:intron | 35.0% | |
| CAGTTACACTCGATATCAAA+AGG | - | chr8_1:38675703-38675722 | None:intergenic | 35.0% | |
| ! | TTATTAACCCCATTTTGTCG+AGG | + | chr8_1:38675748-38675767 | Msa1192730:intron | 35.0% |
| ! | TATTAACCCCATTTTGTCGA+GGG | + | chr8_1:38675749-38675768 | Msa1192730:intron | 35.0% |
| !! | ACTTTGGAGTTCAAATACTC+TGG | - | chr8_1:38675937-38675956 | None:intergenic | 35.0% |
| ACTAGGAACTCATACATCAA+TGG | + | chr8_1:38675969-38675988 | Msa1192730:intron | 35.0% | |
| ! | AACTCATACATCAATGGACT+AGG | + | chr8_1:38675975-38675994 | Msa1192730:intron | 35.0% |
| !! | ACTCATACATCAATGGACTA+GGG | + | chr8_1:38675976-38675995 | Msa1192730:intron | 35.0% |
| CTAATTGCTGTAACATTGTC+AGG | + | chr8_1:38676107-38676126 | Msa1192730:intron | 35.0% | |
| CTTCTAATGCATGCTGAATT+GGG | - | chr8_1:38676142-38676161 | None:intergenic | 35.0% | |
| AATCAAGAGAGCAGTTTAAG+CGG | + | chr8_1:38676301-38676320 | Msa1192730:intron | 35.0% | |
| TAACCATGTGAAATAACCCT+GGG | + | chr8_1:38676445-38676464 | Msa1192730:intron | 35.0% | |
| ! | ATATCTGAAGGTGCAATCAA+TGG | + | chr8_1:38676492-38676511 | Msa1192730:intron | 35.0% |
| ! | ATCATCATCTCTTGGTCTTT+GGG | - | chr8_1:38676533-38676552 | None:intergenic | 35.0% |
| ! | AATCATCATCTCTTGGTCTT+TGG | - | chr8_1:38676534-38676553 | None:intergenic | 35.0% |
| AAAGACCAAGAGATGATGAT+TGG | + | chr8_1:38676533-38676552 | Msa1192730:intron | 35.0% | |
| TACTTCCAATCATCATCTCT+TGG | - | chr8_1:38676541-38676560 | None:intergenic | 35.0% | |
| ! | TGTACACAGCAGTAATTTGT+TGG | - | chr8_1:38676568-38676587 | None:intergenic | 35.0% |
| ATTACTGCTGTGTACAATAG+AGG | + | chr8_1:38676572-38676591 | Msa1192730:intron | 35.0% | |
| CAAATTGAGGTGATCTATGT+AGG | + | chr8_1:38676804-38676823 | Msa1192730:intron | 35.0% | |
| TTGTATGTAGGTGCATCTAA+CGG | + | chr8_1:38676925-38676944 | Msa1192730:intron | 35.0% | |
| !!! | ATTTTTGGGTTTCTGGAATG+AGG | + | chr8_1:38677024-38677043 | Msa1192730:CDS | 35.0% |
| TAGTGGAGACCAAAAATCTT+AGG | + | chr8_1:38677053-38677072 | Msa1192730:CDS | 35.0% | |
| AGTGGAGACCAAAAATCTTA+GGG | + | chr8_1:38677054-38677073 | Msa1192730:CDS | 35.0% | |
| CTTAGGGAAAACACAATTTC+TGG | + | chr8_1:38677070-38677089 | Msa1192730:CDS | 35.0% | |
| ! | GCTCTAGATATCAAGTTTAG+TGG | + | chr8_1:38677165-38677184 | Msa1192730:intron | 35.0% |
| !! | TACGATTTTATCGGCTATTG+AGG | + | chr8_1:38677608-38677627 | Msa1192730:intron | 35.0% |
| !!! | TGAGGTTTTTTATTCACTGG+AGG | + | chr8_1:38677626-38677645 | Msa1192730:intron | 35.0% |
| !!! | GAGGTTTTTTATTCACTGGA+GGG | + | chr8_1:38677627-38677646 | Msa1192730:intron | 35.0% |
| AGACCTGAATCAATATGAAG+AGG | - | chr8_1:38677813-38677832 | None:intergenic | 35.0% | |
| AAAGAAATCATACCAGTCTG+AGG | - | chr8_1:38678065-38678084 | None:intergenic | 35.0% | |
| AAAGTTATTGAGCTTGGTTC+TGG | + | chr8_1:38678095-38678114 | Msa1192730:CDS | 35.0% | |
| AGGATACAATCAACTACTTG+TGG | - | chr8_1:38678191-38678210 | None:intergenic | 35.0% | |
| TTGTTCTACAAATGGATGTG+AGG | + | chr8_1:38678295-38678314 | Msa1192730:intron | 35.0% | |
| CTAGCATCCATTGTGAATAA+AGG | - | chr8_1:38678436-38678455 | None:intergenic | 35.0% | |
| CTTTATTCACAATGGATGCT+AGG | + | chr8_1:38678434-38678453 | Msa1192730:intron | 35.0% | |
| TCTTGTCATATGTATGCATG+TGG | + | chr8_1:38678839-38678858 | Msa1192730:intron | 35.0% | |
| CTTGTCATATGTATGCATGT+GGG | + | chr8_1:38678840-38678859 | Msa1192730:intron | 35.0% | |
| AAACAAATGTACTCTACTGC+TGG | + | chr8_1:38679030-38679049 | Msa1192730:intron | 35.0% | |
| AAGGGAGAAATGTCAAACAT+GGG | - | chr8_1:38679091-38679110 | None:intergenic | 35.0% | |
| AAAGGGAGAAATGTCAAACA+TGG | - | chr8_1:38679092-38679111 | None:intergenic | 35.0% | |
| GTTTGACATTTCTCCCTTTA+CGG | + | chr8_1:38679093-38679112 | Msa1192730:intron | 35.0% | |
| TTTGACATTTCTCCCTTTAC+GGG | + | chr8_1:38679094-38679113 | Msa1192730:intron | 35.0% | |
| TGAAGTCTATGAAGCTTCAT+TGG | + | chr8_1:38679314-38679333 | Msa1192730:CDS | 35.0% | |
| TATGAAGCTTCATTGGAATC+AGG | + | chr8_1:38679321-38679340 | Msa1192730:CDS | 35.0% | |
| ! | TTCATGTTATGGTTGGTCAA+TGG | + | chr8_1:38679664-38679683 | Msa1192730:intron | 35.0% |
| ATCAAAAATAGGATCTTCCG+AGG | + | chr8_1:38679966-38679985 | Msa1192730:CDS | 35.0% | |
| TCCAAAAAGAGGAAACTCAT+TGG | + | chr8_1:38680002-38680021 | Msa1192730:CDS | 35.0% | |
| ! | TCCAATGAGTTTCCTCTTTT+TGG | - | chr8_1:38680006-38680025 | None:intergenic | 35.0% |
| AGAACTATGACAAAGAAGTC+TGG | + | chr8_1:38680076-38680095 | Msa1192730:CDS | 35.0% | |
| AACAGTCAACCAACAATGAA+AGG | - | chr8_1:38680231-38680250 | None:intergenic | 35.0% | |
| TCACTAGACATTTCTTCTGT+TGG | - | chr8_1:38680282-38680301 | None:intergenic | 35.0% | |
| ! | AGTACTTTTGTCATCCAAGA+AGG | + | chr8_1:38680361-38680380 | Msa1192730:three_prime_UTR | 35.0% |
| AAGGCACAAATGAATGTGAA+GGG | + | chr8_1:38680380-38680399 | Msa1192730:three_prime_UTR | 35.0% | |
| CTTTGCAGTGAGATTATGTA+TGG | + | chr8_1:38680527-38680546 | Msa1192730:three_prime_UTR | 35.0% | |
| !!! | TCTTTTGATTTCAGTGCCTG+GGG | - | chr8_1:38673875-38673894 | None:intergenic | 40.0% |
| !!! | CATCTTTTGATTTCAGTGCC+TGG | - | chr8_1:38673877-38673896 | None:intergenic | 40.0% |
| !! | CAGGCACTGAAATCAAAAGA+TGG | + | chr8_1:38673875-38673894 | Msa1192730:exon | 40.0% |
| ACTGACCTCAAAAAGAGTTG+AGG | - | chr8_1:38674225-38674244 | None:intergenic | 40.0% | |
| GGTGAGTTAAGAGACATTGA+AGG | + | chr8_1:38674294-38674313 | Msa1192730:intron | 40.0% | |
| ATTGAAGGAGTTTGACGATC+TGG | + | chr8_1:38674309-38674328 | Msa1192730:intron | 40.0% | |
| TGCAGTTATGAGTTGTGAGA+TGG | - | chr8_1:38674564-38674583 | None:intergenic | 40.0% | |
| ATAATCGGTCATTGTAAGCC+CGG | - | chr8_1:38674603-38674622 | None:intergenic | 40.0% | |
| !! | TACAGTTTGGTGTATTAGGC+CGG | + | chr8_1:38674826-38674845 | Msa1192730:intron | 40.0% |
| TTTCCCTTGTAAACATCCAG+TGG | + | chr8_1:38674958-38674977 | Msa1192730:intron | 40.0% | |
| TTCCCTTGTAAACATCCAGT+GGG | + | chr8_1:38674959-38674978 | Msa1192730:intron | 40.0% | |
| ATCCCACTGGATGTTTACAA+GGG | - | chr8_1:38674964-38674983 | None:intergenic | 40.0% | |
| AATCCCACTGGATGTTTACA+AGG | - | chr8_1:38674965-38674984 | None:intergenic | 40.0% | |
| TGTAAACATCCAGTGGGATT+TGG | + | chr8_1:38674965-38674984 | Msa1192730:intron | 40.0% | |
| CAACATTAACCAAATCCCAC+TGG | - | chr8_1:38674977-38674996 | None:intergenic | 40.0% | |
| AGCTTCAATCAACAAGTGAC+AGG | - | chr8_1:38675073-38675092 | None:intergenic | 40.0% | |
| TCAACTGGAACAAAAACTCC+AGG | - | chr8_1:38675103-38675122 | None:intergenic | 40.0% | |
| GAAACATTAGGCAGTTTGAG+AGG | + | chr8_1:38675261-38675280 | Msa1192730:intron | 40.0% | |
| GAAGTATAGAGAGAGAAGGT+AGG | - | chr8_1:38675322-38675341 | None:intergenic | 40.0% | |
| ! | AAGGGAAGTATAGAGAGAGA+AGG | - | chr8_1:38675326-38675345 | None:intergenic | 40.0% |
| AGTAAGATGCAGCTTGAAAG+CGG | - | chr8_1:38675353-38675372 | None:intergenic | 40.0% | |
| AGTTAGTTACCCCTGGATAA+TGG | + | chr8_1:38675405-38675424 | Msa1192730:intron | 40.0% | |
| GAGAGATTTCCATTATCCAG+GGG | - | chr8_1:38675417-38675436 | None:intergenic | 40.0% | |
| GTGCTCTCTTTCATAGAATC+TGG | - | chr8_1:38675530-38675549 | None:intergenic | 40.0% | |
| TCATCTTCGCAAATAACCCA+GGG | - | chr8_1:38675583-38675602 | None:intergenic | 40.0% | |
| ATCATCTTCGCAAATAACCC+AGG | - | chr8_1:38675584-38675603 | None:intergenic | 40.0% | |
| TTAGGATGAGTCTTCGAAAC+TGG | - | chr8_1:38675610-38675629 | None:intergenic | 40.0% | |
| AGTTTCGAAGACTCATCCTA+AGG | + | chr8_1:38675609-38675628 | Msa1192730:intron | 40.0% | |
| ! | ATTAACCCCATTTTGTCGAG+GGG | + | chr8_1:38675750-38675769 | Msa1192730:intron | 40.0% |
| TTCATACCCCTCGACAAAAT+GGG | - | chr8_1:38675759-38675778 | None:intergenic | 40.0% | |
| TTTCATACCCCTCGACAAAA+TGG | - | chr8_1:38675760-38675779 | None:intergenic | 40.0% | |
| !! | CATCAATGGACTAGGGAAAA+AGG | + | chr8_1:38675983-38676002 | Msa1192730:intron | 40.0% |
| ! | ACAAGACGTAGTGGAAATCT+TGG | + | chr8_1:38676073-38676092 | Msa1192730:intron | 40.0% |
| CCTTCTAATGCATGCTGAAT+TGG | - | chr8_1:38676143-38676162 | None:intergenic | 40.0% | |
| CCAATTCAGCATGCATTAGA+AGG | + | chr8_1:38676140-38676159 | Msa1192730:CDS | 40.0% | |
| ATTCAGCATGCATTAGAAGG+TGG | + | chr8_1:38676143-38676162 | Msa1192730:CDS | 40.0% | |
| ! | TTTTTGCGGGATCAATGTTC+AGG | - | chr8_1:38676249-38676268 | None:intergenic | 40.0% |
| TCAATTGAAAGAGGAAGGAG+AGG | + | chr8_1:38676372-38676391 | Msa1192730:intron | 40.0% | |
| TGTTTGGGAACCATTAGCTA+AGG | + | chr8_1:38676422-38676441 | Msa1192730:intron | 40.0% | |
| CACATGGTTACCTTAGCTAA+TGG | - | chr8_1:38676435-38676454 | None:intergenic | 40.0% | |
| GTAACCATGTGAAATAACCC+TGG | + | chr8_1:38676444-38676463 | Msa1192730:intron | 40.0% | |
| AAGAACAAGTATGTGCAGCT+TGG | + | chr8_1:38676751-38676770 | Msa1192730:intron | 40.0% | |
| !! | TGACGCTGTTTGTTGTATGT+AGG | + | chr8_1:38676913-38676932 | Msa1192730:intron | 40.0% |
| GCCAGAAAACAATCTAACAG+TGG | + | chr8_1:38676992-38677011 | Msa1192730:CDS | 40.0% | |
| ! | GCCACTGTTAGATTGTTTTC+TGG | - | chr8_1:38676996-38677015 | None:intergenic | 40.0% |
| AACCTTGATCCAAGAATCCT+GGG | - | chr8_1:38677133-38677152 | None:intergenic | 40.0% | |
| AGTTTAGTGGGAAAGACAAG+TGG | + | chr8_1:38677178-38677197 | Msa1192730:intron | 40.0% | |
| !!! | TTCACTGGAGGGACATTTTT+TGG | + | chr8_1:38677536-38677555 | Msa1192730:intron | 40.0% |
| ! | TTCACTGGAGGGACATTTTT+CGG | + | chr8_1:38677536-38677555 | Msa1192730:intron | 40.0% |
| AAATTCATGATGTCCTCTGC+AGG | + | chr8_1:38677858-38677877 | Msa1192730:intron | 40.0% | |
| TGAGCAAGAACATCTTCTGA+TGG | - | chr8_1:38677891-38677910 | None:intergenic | 40.0% | |
| ! | ATTTTTCTGTGACCTCAGAC+TGG | + | chr8_1:38678050-38678069 | Msa1192730:intron | 40.0% |
| TGTTATTGCAGCTGTTACTG+AGG | + | chr8_1:38678136-38678155 | Msa1192730:CDS | 40.0% | |
| ! | TCCATCTGAGATTACAACCT+CGG | - | chr8_1:38678165-38678184 | None:intergenic | 40.0% |
| TCTACAAATGGATGTGAGGA+AGG | + | chr8_1:38678299-38678318 | Msa1192730:intron | 40.0% | |
| CTACAAATGGATGTGAGGAA+GGG | + | chr8_1:38678300-38678319 | Msa1192730:intron | 40.0% | |
| AAGGGAAAATAGTGTCTCCT+GGG | + | chr8_1:38678318-38678337 | Msa1192730:intron | 40.0% | |
| ATGACCTTATCAGACGAGTT+TGG | + | chr8_1:38678622-38678641 | Msa1192730:intron | 40.0% | |
| TGGATAGTCAAGGTTAGACT+TGG | - | chr8_1:38678892-38678911 | None:intergenic | 40.0% | |
| ! | ACATGGGCGAAGTATTTCAA+CGG | - | chr8_1:38679075-38679094 | None:intergenic | 40.0% |
| TTGACATTTCTCCCTTTACG+GGG | + | chr8_1:38679095-38679114 | Msa1192730:intron | 40.0% | |
| CGTAACATTGAAGCTAACTC+TGG | + | chr8_1:38679271-38679290 | Msa1192730:CDS | 40.0% | |
| !! | AAGCTAACTCTGGAGCATTT+GGG | + | chr8_1:38679281-38679300 | Msa1192730:CDS | 40.0% |
| TCAGCATGTGGTGATAATTC+CGG | + | chr8_1:38679573-38679592 | Msa1192730:intron | 40.0% | |
| !! | GCTTGCCTTGCCTTTTATTT+TGG | + | chr8_1:38679836-38679855 | Msa1192730:intron | 40.0% |
| AAACTCATTGGACCAGTTCT+TGG | + | chr8_1:38680014-38680033 | Msa1192730:CDS | 40.0% | |
| GTTCTTGAATGGTGCAGATA+GGG | + | chr8_1:38680113-38680132 | Msa1192730:CDS | 40.0% | |
| AGGGTGATTCTGATTAAGAG+TGG | - | chr8_1:38680174-38680193 | None:intergenic | 40.0% | |
| TTTCTTCTAGACATTCTGCC+TGG | + | chr8_1:38680200-38680219 | Msa1192730:three_prime_UTR | 40.0% | |
| TTCTTCTAGACATTCTGCCT+GGG | + | chr8_1:38680201-38680220 | Msa1192730:three_prime_UTR | 40.0% | |
| AGTCAACCAACAATGAAAGG+AGG | - | chr8_1:38680228-38680247 | None:intergenic | 40.0% | |
| CTAGACATTTCTTCTGTTGG+AGG | - | chr8_1:38680279-38680298 | None:intergenic | 40.0% | |
| CACATTCATTTGTGCCTTCT+TGG | - | chr8_1:38680378-38680397 | None:intergenic | 40.0% | |
| ! | GAAGGCACAAATGAATGTGA+AGG | + | chr8_1:38680379-38680398 | Msa1192730:three_prime_UTR | 40.0% |
| AGGCACAAATGAATGTGAAG+GGG | + | chr8_1:38680381-38680400 | Msa1192730:three_prime_UTR | 40.0% | |
| AAATGAATGTGAAGGGGATG+TGG | + | chr8_1:38680387-38680406 | Msa1192730:three_prime_UTR | 40.0% | |
| !!! | CTTTTGATTTCAGTGCCTGG+GGG | - | chr8_1:38673874-38673893 | None:intergenic | 45.0% |
| ! | AAAAGAGTTGAGGAGCGTGA+AGG | - | chr8_1:38674215-38674234 | None:intergenic | 45.0% |
| ! | ACGCTCCTCAACTCTTTTTG+AGG | + | chr8_1:38674217-38674236 | Msa1192730:CDS | 45.0% |
| GTGTGACGTATGCTACAGTT+TGG | + | chr8_1:38674813-38674832 | Msa1192730:intron | 45.0% | |
| AAATTTGGGGGGTTACACTC+CGG | - | chr8_1:38674848-38674867 | None:intergenic | 45.0% | |
| TGATTGAAGCTCAATGGACC+TGG | + | chr8_1:38675082-38675101 | Msa1192730:intron | 45.0% | |
| ! | TCAGGAATATGGTGGGACTT+TGG | - | chr8_1:38675299-38675318 | None:intergenic | 45.0% |
| AGGTAGGTCAGGAATATGGT+GGG | - | chr8_1:38675306-38675325 | None:intergenic | 45.0% | |
| AAGGTAGGTCAGGAATATGG+TGG | - | chr8_1:38675307-38675326 | None:intergenic | 45.0% | |
| GAGAAGGTAGGTCAGGAATA+TGG | - | chr8_1:38675310-38675329 | None:intergenic | 45.0% | |
| ATAGAGAGAGAAGGTAGGTC+AGG | - | chr8_1:38675317-38675336 | None:intergenic | 45.0% | |
| CAGCTTGAAAGCGGTCTTAA+GGG | - | chr8_1:38675344-38675363 | None:intergenic | 45.0% | |
| TCATACCCCTCGACAAAATG+GGG | - | chr8_1:38675758-38675777 | None:intergenic | 45.0% | |
| ! | CGTAGTGGAAATCTTGGACA+AGG | + | chr8_1:38676079-38676098 | Msa1192730:intron | 45.0% |
| GCATTAGAAGGTGGAATCTG+TGG | + | chr8_1:38676152-38676171 | Msa1192730:CDS | 45.0% | |
| ATTGCCAATGCCAAGGTAGT+CGG | + | chr8_1:38676176-38676195 | Msa1192730:intron | 45.0% | |
| TTGAAAGAGGAAGGAGAGGT+TGG | + | chr8_1:38676376-38676395 | Msa1192730:intron | 45.0% | |
| TGAAAGAGGAAGGAGAGGTT+GGG | + | chr8_1:38676377-38676396 | Msa1192730:intron | 45.0% | |
| CATGTGAAATAACCCTGGGA+GGG | + | chr8_1:38676449-38676468 | Msa1192730:intron | 45.0% | |
| ! | ATCTCTTGGTCTTTGGGTTC+TGG | - | chr8_1:38676527-38676546 | None:intergenic | 45.0% |
| GCTGTGTACAATAGAGGTAG+TGG | + | chr8_1:38676578-38676597 | Msa1192730:intron | 45.0% | |
| TCATTGCCCATAGTCGCAAT+AGG | + | chr8_1:38676693-38676712 | Msa1192730:CDS | 45.0% | |
| AGGTGATCTATGTAGGGTTC+AGG | + | chr8_1:38676811-38676830 | Msa1192730:intron | 45.0% | |
| GGTGATCTATGTAGGGTTCA+GGG | + | chr8_1:38676812-38676831 | Msa1192730:intron | 45.0% | |
| CATGTGTGTCTGCTTTCTTC+AGG | - | chr8_1:38676862-38676881 | None:intergenic | 45.0% | |
| CTGAAGAAAGCAGACACACA+TGG | + | chr8_1:38676860-38676879 | Msa1192730:intron | 45.0% | |
| ! | ACGCTTTCCAGCAACTTTTC+TGG | - | chr8_1:38676963-38676982 | None:intergenic | 45.0% |
| CAATCTAACAGTGGCTGTAG+CGG | + | chr8_1:38677001-38677020 | Msa1192730:CDS | 45.0% | |
| !!! | AGTGGCTGTAGCGGATTTTT+GGG | + | chr8_1:38677010-38677029 | Msa1192730:CDS | 45.0% |
| !!! | GTAGCGGATTTTTGGGTTTC+TGG | + | chr8_1:38677017-38677036 | Msa1192730:CDS | 45.0% |
| CTGGAATGAGGACACATTAG+TGG | + | chr8_1:38677036-38677055 | Msa1192730:CDS | 45.0% | |
| !! | AGTTGGTACCGATGAACTAG+TGG | + | chr8_1:38677103-38677122 | Msa1192730:intron | 45.0% |
| !! | GTTGGTACCGATGAACTAGT+GGG | + | chr8_1:38677104-38677123 | Msa1192730:intron | 45.0% |
| TGGGATACCCACTAGTTCAT+CGG | - | chr8_1:38677114-38677133 | None:intergenic | 45.0% | |
| ATCCCAGGATTCTTGGATCA+AGG | + | chr8_1:38677128-38677147 | Msa1192730:intron | 45.0% | |
| CAACCTTGATCCAAGAATCC+TGG | - | chr8_1:38677134-38677153 | None:intergenic | 45.0% | |
| CAGGATTCTTGGATCAAGGT+TGG | + | chr8_1:38677132-38677151 | Msa1192730:intron | 45.0% | |
| ! | GGATCAAGGTTGGCTCTTAT+CGG | + | chr8_1:38677142-38677161 | Msa1192730:intron | 45.0% |
| ! | GATCAAGGTTGGCTCTTATC+GGG | + | chr8_1:38677143-38677162 | Msa1192730:intron | 45.0% |
| TGATGTCCTCTGCAGGTAAT+TGG | + | chr8_1:38677865-38677884 | Msa1192730:intron | 45.0% | |
| !! | ATTGAGCTTGGTTCTGGCTA+TGG | + | chr8_1:38678101-38678120 | Msa1192730:CDS | 45.0% |
| TCCGAGGTTGTAATCTCAGA+TGG | + | chr8_1:38678161-38678180 | Msa1192730:CDS | 45.0% | |
| GAAGGGAAAATAGTGTCTCC+TGG | + | chr8_1:38678317-38678336 | Msa1192730:intron | 45.0% | |
| CGTGATTTCATGCTGTTAGC+AGG | + | chr8_1:38678576-38678595 | Msa1192730:intron | 45.0% | |
| ACCTTATCAGACGAGTTTGG+TGG | + | chr8_1:38678625-38678644 | Msa1192730:intron | 45.0% | |
| !! | AGACGAGTTTGGTGGCATTT+TGG | + | chr8_1:38678633-38678652 | Msa1192730:intron | 45.0% |
| ! | GGGTGTGCTGATAGACAAAT+TGG | + | chr8_1:38678860-38678879 | Msa1192730:intron | 45.0% |
| TGACATTTCTCCCTTTACGG+GGG | + | chr8_1:38679096-38679115 | Msa1192730:intron | 45.0% | |
| !! | GAAGCTAACTCTGGAGCATT+TGG | + | chr8_1:38679280-38679299 | Msa1192730:CDS | 45.0% |
| !! | AGCTAACTCTGGAGCATTTG+GGG | + | chr8_1:38679282-38679301 | Msa1192730:CDS | 45.0% |
| CAATTCGAGCAAGATCTCTG+TGG | - | chr8_1:38679933-38679952 | None:intergenic | 45.0% | |
| TTGGAGGTAGCTGAAGAACA+TGG | + | chr8_1:38680033-38680052 | Msa1192730:CDS | 45.0% | |
| GGTTCTTGAATGGTGCAGAT+AGG | + | chr8_1:38680112-38680131 | Msa1192730:CDS | 45.0% | |
| ATGGTGCAGATAGGGACTAT+TGG | + | chr8_1:38680121-38680140 | Msa1192730:CDS | 45.0% | |
| TATTGGCCCAGTTATGAGAC+AGG | + | chr8_1:38680138-38680157 | Msa1192730:CDS | 45.0% | |
| CAGTGACCTGTCTCATAACT+GGG | - | chr8_1:38680147-38680166 | None:intergenic | 45.0% | |
| !!! | ATTCTTTAAAAATTTATTTT+AGG | + | chr8_1:38677375-38677394 | Msa1192730:intron | 5.0% |
| !!! | TTCTTTAAAAATTTATTTTA+GGG | + | chr8_1:38677376-38677395 | Msa1192730:intron | 5.0% |
| !! | TTTAAAAATCATATTATATA+GGG | - | chr8_1:38678945-38678964 | None:intergenic | 5.0% |
| !!! | TTTTAAAAATCATATTATAT+AGG | - | chr8_1:38678946-38678965 | None:intergenic | 5.0% |
| !!! | TTTGTTTTTAATATAAATAT+AGG | - | chr8_1:38679017-38679036 | None:intergenic | 5.0% |
| ! | TAGAGAGAAGAGCGTGACGA+AGG | - | chr8_1:38673944-38673963 | None:intergenic | 50.0% |
| ! | AGTTGAGGAGCGTGAAGGAT+TGG | - | chr8_1:38674210-38674229 | None:intergenic | 50.0% |
| GCAGCTTGAAAGCGGTCTTA+AGG | - | chr8_1:38675345-38675364 | None:intergenic | 50.0% | |
| GAAGCTGAGAGTAGTAGGGA+AGG | - | chr8_1:38675376-38675395 | None:intergenic | 50.0% | |
| GCTGGAAGCTGAGAGTAGTA+GGG | - | chr8_1:38675380-38675399 | None:intergenic | 50.0% | |
| AGCTGGAAGCTGAGAGTAGT+AGG | - | chr8_1:38675381-38675400 | None:intergenic | 50.0% | |
| GGGGTAACTAACTACTGAGC+TGG | - | chr8_1:38675398-38675417 | None:intergenic | 50.0% | |
| GCTCAGTAGTTAGTTACCCC+TGG | + | chr8_1:38675398-38675417 | Msa1192730:intron | 50.0% | |
| AGTCTATGAAACTCCCTCCC+TGG | + | chr8_1:38675563-38675582 | Msa1192730:intron | 50.0% | |
| GTCTATGAAACTCCCTCCCT+GGG | + | chr8_1:38675564-38675583 | Msa1192730:intron | 50.0% | |
| CTTCGCAAATAACCCAGGGA+GGG | - | chr8_1:38675579-38675598 | None:intergenic | 50.0% | |
| TCTTCGCAAATAACCCAGGG+AGG | - | chr8_1:38675580-38675599 | None:intergenic | 50.0% | |
| ACACAGCTCACAAGACGTAG+TGG | + | chr8_1:38676064-38676083 | Msa1192730:intron | 50.0% | |
| ! | TACCAACTCACCGACTACCT+TGG | - | chr8_1:38676189-38676208 | None:intergenic | 50.0% |
| AACCCGTGTGGACTCTGTTT+GGG | + | chr8_1:38676407-38676426 | Msa1192730:intron | 50.0% | |
| TTCCCAAACAGAGTCCACAC+GGG | - | chr8_1:38676412-38676431 | None:intergenic | 50.0% | |
| GTTCCCAAACAGAGTCCACA+CGG | - | chr8_1:38676413-38676432 | None:intergenic | 50.0% | |
| ! | CCTCCCAGGGTTATTTCACA+TGG | - | chr8_1:38676451-38676470 | None:intergenic | 50.0% |
| CCATGTGAAATAACCCTGGG+AGG | + | chr8_1:38676448-38676467 | Msa1192730:intron | 50.0% | |
| GCAGTGCCTATTGCGACTAT+GGG | - | chr8_1:38676702-38676721 | None:intergenic | 50.0% | |
| TGCAGTGCCTATTGCGACTA+TGG | - | chr8_1:38676703-38676722 | None:intergenic | 50.0% | |
| CAGACACACATGGCTGAAAG+TGG | + | chr8_1:38676870-38676889 | Msa1192730:intron | 50.0% | |
| AAGTGGCTGCGCAAAGGTTA+AGG | + | chr8_1:38676887-38676906 | Msa1192730:intron | 50.0% | |
| GCATCTAACGGTGATGTTGC+TGG | + | chr8_1:38676937-38676956 | Msa1192730:CDS | 50.0% | |
| TTGCTGGCCAGAAAAGTTGC+TGG | + | chr8_1:38676953-38676972 | Msa1192730:CDS | 50.0% | |
| !! | AGTTGCTGGAAAGCGTCAGA+TGG | + | chr8_1:38676967-38676986 | Msa1192730:CDS | 50.0% |
| !!! | CAGTGGCTGTAGCGGATTTT+TGG | + | chr8_1:38677009-38677028 | Msa1192730:CDS | 50.0% |
| ! | GATGAACTAGTGGGTATCCC+AGG | + | chr8_1:38677113-38677132 | Msa1192730:intron | 50.0% |
| AGTGGGTATCCCAGGATTCT+TGG | + | chr8_1:38677121-38677140 | Msa1192730:intron | 50.0% | |
| TGATGGCCAATTACCTGCAG+AGG | - | chr8_1:38677874-38677893 | None:intergenic | 50.0% | |
| GCCACCAAACTCGTCTGATA+AGG | - | chr8_1:38678629-38678648 | None:intergenic | 50.0% | |
| CGAGAAATCTCCCCCGTAAA+GGG | - | chr8_1:38679109-38679128 | None:intergenic | 50.0% | |
| ACGAGAAATCTCCCCCGTAA+AGG | - | chr8_1:38679110-38679129 | None:intergenic | 50.0% | |
| !! | CTCTGGAGCATTTGGGGATA+CGG | + | chr8_1:38679288-38679307 | Msa1192730:CDS | 50.0% |
| GAGTCAAAGGGTTCAGCATG+TGG | + | chr8_1:38679561-38679580 | Msa1192730:intron | 50.0% | |
| GCTGCATGCATGTGAATCTG+CGG | - | chr8_1:38679818-38679837 | None:intergenic | 50.0% | |
| CTCATTGGACCAGTTCTTGG+AGG | + | chr8_1:38680017-38680036 | Msa1192730:CDS | 50.0% | |
| CTTCAGCTACCTCCAAGAAC+TGG | - | chr8_1:38680029-38680048 | None:intergenic | 50.0% | |
| !! | AGAAGTCTGGAAGCGTCATG+AGG | + | chr8_1:38680089-38680108 | Msa1192730:CDS | 50.0% |
| !! | GAAGTCTGGAAGCGTCATGA+GGG | + | chr8_1:38680090-38680109 | Msa1192730:CDS | 50.0% |
| !! | AAGTCTGGAAGCGTCATGAG+GGG | + | chr8_1:38680091-38680110 | Msa1192730:CDS | 50.0% |
| CGTCATGAGGGGTTCTTGAA+TGG | + | chr8_1:38680102-38680121 | Msa1192730:CDS | 50.0% | |
| GCAGTGACCTGTCTCATAAC+TGG | - | chr8_1:38680148-38680167 | None:intergenic | 50.0% | |
| CAACAATGAAAGGAGGTCCC+AGG | - | chr8_1:38680221-38680240 | None:intergenic | 50.0% | |
| CTGGGACCTCCTTTCATTGT+TGG | + | chr8_1:38680219-38680238 | Msa1192730:three_prime_UTR | 50.0% | |
| TCTTTCACTCAGTCTCCCCC+AGG | + | chr8_1:38673856-38673875 | Msa1192730:five_prime_UTR | 55.0% | |
| CTGTGGCATTGCCAATGCCA+AGG | + | chr8_1:38676169-38676188 | Msa1192730:CDS | 55.0% | |
| ! | CTCACCGACTACCTTGGCAT+TGG | - | chr8_1:38676183-38676202 | None:intergenic | 55.0% |
| TGCCAAGGTAGTCGGTGAGT+TGG | + | chr8_1:38676184-38676203 | Msa1192730:intron | 55.0% | |
| TTGGGTAGTACCAACCCGTG+TGG | + | chr8_1:38676395-38676414 | Msa1192730:intron | 55.0% | |
| CAAACAGAGTCCACACGGGT+TGG | - | chr8_1:38676408-38676427 | None:intergenic | 55.0% | |
| CAACCCGTGTGGACTCTGTT+TGG | + | chr8_1:38676406-38676425 | Msa1192730:intron | 55.0% | |
| TCTCTCTCAACTCCCTCCCA+GGG | - | chr8_1:38676464-38676483 | None:intergenic | 55.0% | |
| TTCTCTCTCAACTCCCTCCC+AGG | - | chr8_1:38676465-38676484 | None:intergenic | 55.0% | |
| !! | TGCTGGAAAGCGTCAGATGG+TGG | + | chr8_1:38676970-38676989 | Msa1192730:CDS | 55.0% |
| !! | GCTTGGTTCTGGCTATGGCT+TGG | + | chr8_1:38678106-38678125 | Msa1192730:CDS | 55.0% |
| ! | AGCTGTTACTGAGGCATCCG+AGG | + | chr8_1:38678145-38678164 | Msa1192730:CDS | 55.0% |
| CAGGGCAACCAAAGCTCAGC+TGG | + | chr8_1:38676830-38676849 | Msa1192730:intron | 60.0% | |
| GGCAACCAAAGCTCAGCTGG+TGG | + | chr8_1:38676833-38676852 | Msa1192730:intron | 60.0% | |
| GGCTGAAAGTGGCTGCGCAA+AGG | + | chr8_1:38676881-38676900 | Msa1192730:intron | 60.0% | |
| ! | GGTTCTGGCTATGGCTTGGC+TGG | + | chr8_1:38678110-38678129 | Msa1192730:CDS | 60.0% |
| GGCAGCCACCAGCTGAGCTT+TGG | - | chr8_1:38676841-38676860 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 38673855 | 38680608 | 38673855 | ID=Msa1192730;Name=Msa1192730 |
| chr8_1 | mRNA | 38673855 | 38680608 | 38673855 | ID=Msa1192730-mRNA-1;Parent=Msa1192730;Name=Msa1192730-mRNA-1;_AED=0.34;_eAED=0.34;_QI=39|0.55|0.6|0.7|1|1|10|411|405 |
| chr8_1 | exon | 38673855 | 38673990 | 38673855 | ID=Msa1192730-mRNA-1:exon:12633;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38674082 | 38674238 | 38674082 | ID=Msa1192730-mRNA-1:exon:12634;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38674468 | 38674543 | 38674468 | ID=Msa1192730-mRNA-1:exon:12635;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38676134 | 38676190 | 38676134 | ID=Msa1192730-mRNA-1:exon:12636;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38676693 | 38676758 | 38676693 | ID=Msa1192730-mRNA-1:exon:12637;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38676935 | 38677103 | 38676935 | ID=Msa1192730-mRNA-1:exon:12638;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38677880 | 38677940 | 38677880 | ID=Msa1192730-mRNA-1:exon:12639;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38678088 | 38678203 | 38678088 | ID=Msa1192730-mRNA-1:exon:12640;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38679263 | 38679395 | 38679263 | ID=Msa1192730-mRNA-1:exon:12641;Parent=Msa1192730-mRNA-1 |
| chr8_1 | exon | 38679912 | 38680608 | 38679912 | ID=Msa1192730-mRNA-1:exon:12642;Parent=Msa1192730-mRNA-1 |
| chr8_1 | five_prime_UTR | 38673855 | 38673893 | 38673855 | ID=Msa1192730-mRNA-1:five_prime_utr;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38673894 | 38673990 | 38673894 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38674082 | 38674238 | 38674082 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38674468 | 38674543 | 38674468 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38676134 | 38676190 | 38676134 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38676693 | 38676758 | 38676693 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38676935 | 38677103 | 38676935 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38677880 | 38677940 | 38677880 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38678088 | 38678203 | 38678088 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38679263 | 38679395 | 38679263 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | CDS | 38679912 | 38680197 | 38679912 | ID=Msa1192730-mRNA-1:cds;Parent=Msa1192730-mRNA-1 |
| chr8_1 | three_prime_UTR | 38680198 | 38680608 | 38680198 | ID=Msa1192730-mRNA-1:three_prime_utr;Parent=Msa1192730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
