AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0476110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476110 MtrunA17_Chr3g0146031 98.252 286 5 0 1 286 1 286 0.0 585
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476110 AT4G38240.1 72.281 285 79 0 1 285 1 285 8.20e-160 452
Msa0476110 AT4G38240.2 72.281 285 79 0 1 285 1 285 8.20e-160 452
Msa0476110 AT4G38240.3 71.786 280 79 0 1 280 1 280 8.66e-156 442

Find 117 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTTGCGACATTTGTTTA+TGG 0.208583 3_3:-79861862 Msa0476110:three_prime_UTR
GAAAACATTGCTCAACAATT+TGG 0.214206 3_3:-79860875 Msa0476110:three_prime_UTR
GGATATGCCTTCGGCCATTT+TGG 0.228883 3_3:+79861918 None:intergenic
TGAAGTAGCTTCAAAGATTC+TGG 0.231515 3_3:+79860611 None:intergenic
TATCGCTCGGACTTCTTTCC+TGG 0.251249 3_3:-79861984 Msa0476110:CDS
TTTGGGAAATGGCGAAATTT+TGG 0.251374 3_3:-79868548 Msa0476110:exon
TAAAGGAAATCTTGAAGAAA+TGG 0.304704 3_3:+79867690 None:intergenic
TATCCATTCTAGGTCCATTA+TGG 0.306360 3_3:-79863228 Msa0476110:intron
TCTTCTCTTTGTTGCAGCCT+TGG 0.315376 3_3:-79868511 Msa0476110:CDS
CTTGAACAAGAGACTTGATT+TGG 0.319300 3_3:+79868124 None:intergenic
ATGGGGAAGAATTCCAGTTT+AGG 0.332261 3_3:-79861843 Msa0476110:three_prime_UTR
AGAGAGGGTAATGTGAAATT+TGG 0.338184 3_3:-79868625 None:intergenic
TGGACTTCATTCAGCTTGAT+TGG 0.364035 3_3:+79861233 None:intergenic
TTATATGTTCTGCATACTTC+GGG 0.365657 3_3:+79861595 None:intergenic
GGGATGAACTATCACCAAAA+TGG 0.369625 3_3:-79861932 Msa0476110:CDS
GTCGCAAACACAAACAATAA+TGG 0.374080 3_3:+79861874 None:intergenic
CCTGGCCTTTCAGTTTGAAC+CGG 0.375663 3_3:+79863691 None:intergenic
GGTACCAACAGTTCCTAAAC+TGG 0.376344 3_3:+79861830 None:intergenic
AAGAAATGCACATCGAATAA+AGG 0.381589 3_3:+79860216 None:intergenic
GTTTCGTCATGGAATGATAA+TGG 0.381929 3_3:-79863203 Msa0476110:CDS
AATGGACTTGAGCTATTTGT+TGG 0.383291 3_3:-79861111 Msa0476110:three_prime_UTR
ATTGAATAAATTCTTAATGC+TGG 0.390236 3_3:-79860587 Msa0476110:three_prime_UTR
CCATGACGAAACAGCCATAA+TGG 0.392943 3_3:+79863214 None:intergenic
GAATGCTTAGTACTCCTTCA+TGG 0.395475 3_3:+79861799 None:intergenic
AATACCTGTGATACAAATAA+AGG 0.404682 3_3:+79867673 None:intergenic
CTTTGATTACTTTGAAGCTA+TGG 0.412034 3_3:-79863368 Msa0476110:CDS
TGTTTGCGACATTTGTTTAT+GGG 0.423625 3_3:-79861861 Msa0476110:three_prime_UTR
TCTGAAAACAACAACTCTCT+TGG 0.430336 3_3:+79860541 None:intergenic
TCAAAGTAATCAAAGAAATC+AGG 0.439796 3_3:+79863376 None:intergenic
TTTGACAAAACTTCACCTAC+TGG 0.441854 3_3:-79861669 Msa0476110:three_prime_UTR
AAAGGAAATCTTGAAGAAAT+GGG 0.442893 3_3:+79867691 None:intergenic
GTGATCATAGAGTGTGGCCT+TGG 0.443056 3_3:-79860295 Msa0476110:three_prime_UTR
ACGAAGCGTATATTCCTTGT+TGG 0.443306 3_3:-79860635 Msa0476110:three_prime_UTR
CTTGATCTCTACAAAATACA+TGG 0.445682 3_3:+79860414 None:intergenic
GTGCCTAGGACAGCTTATAA+AGG 0.447968 3_3:-79860683 Msa0476110:three_prime_UTR
CTGAAAACAACAACTCTCTT+GGG 0.451162 3_3:+79860542 None:intergenic
GTTATATGTTCTGCATACTT+CGG 0.455588 3_3:+79861594 None:intergenic
ATTTCCTTTATTTGTATCAC+AGG 0.466127 3_3:-79867677 Msa0476110:intron
GGTCATTACAAGTGGGCTCT+TGG 0.466698 3_3:-79863557 Msa0476110:CDS
TTGAATAAATTCTTAATGCT+GGG 0.469653 3_3:-79860586 Msa0476110:three_prime_UTR
TGATCATAGAGTGTGGCCTT+GGG 0.471091 3_3:-79860294 Msa0476110:three_prime_UTR
GAAGTAGCTTCAAAGATTCT+GGG 0.477829 3_3:+79860612 None:intergenic
TCGGACTTCTTTCCTGGACT+AGG 0.478118 3_3:-79861978 Msa0476110:CDS
AAGCTAAATGTTATAAAGCT+AGG 0.483202 3_3:+79860123 None:intergenic
GCGAAGTCTGCTCCAGAGAC+AGG 0.486412 3_3:+79860959 None:intergenic
TATCTATACTACGGATAGAA+AGG 0.487249 3_3:-79860260 Msa0476110:three_prime_UTR
AAATTCAGACGTCAAAAGTA+AGG 0.488269 3_3:-79867513 Msa0476110:CDS
AGTGGCAGCTGTTGTCATCA+TGG 0.497854 3_3:-79867855 Msa0476110:CDS
ACTTCACCTACTGGGACGAT+TGG 0.499642 3_3:-79861660 Msa0476110:three_prime_UTR
TTTGATCTTTACAAGATACA+TGG 0.506278 3_3:+79860346 None:intergenic
TAGTAAGCAATTAACTCTCC+TGG 0.506538 3_3:+79863673 None:intergenic
TACTCCTTCATGGTATATAG+TGG 0.512049 3_3:+79861809 None:intergenic
TTTGGTGGTTACGAAGAAGA+AGG 0.515940 3_3:-79868607 Msa0476110:five_prime_UTR
GAGGGTAATGTGAAATTTGG+TGG 0.518929 3_3:-79868622 Msa0476110:five_prime_UTR
TGCAGACGAACTTTATCGCT+CGG 0.520518 3_3:-79861997 Msa0476110:intron
AACAAGGAATATACGCTTCG+TGG 0.520785 3_3:+79860637 None:intergenic
CTTGGTGTTCATCTACATCC+AGG 0.522745 3_3:-79868493 Msa0476110:intron
GGCTACATTCTTGCTCTCGA+CGG 0.523455 3_3:+79868145 None:intergenic
GTATGCAGAACATATAACTT+TGG 0.523714 3_3:-79861589 Msa0476110:three_prime_UTR
AATTCCAGTTTAGGAACTGT+TGG 0.524104 3_3:-79861834 Msa0476110:three_prime_UTR
TGGTATATTTCAAGAGTGGA+AGG 0.526230 3_3:-79860855 Msa0476110:intron
GCCAGCATCCATCCTAGTCC+AGG 0.526290 3_3:+79861966 None:intergenic
CAGAATTGATAGTCCTCTCC+AGG 0.527635 3_3:+79867813 None:intergenic
ACTTCTTTCCTGGACTAGGA+TGG 0.531658 3_3:-79861974 Msa0476110:CDS
TCCTGGACTAGGATGGATGC+TGG 0.534970 3_3:-79861967 Msa0476110:CDS
CCATTATGGCTGTTTCGTCA+TGG 0.538200 3_3:-79863214 Msa0476110:CDS
GAAGGTCGACTGGAAGTCAA+TGG 0.538850 3_3:-79861129 Msa0476110:intron
AATCAAGCTGAATGAAGTCC+AGG 0.541494 3_3:-79861231 Msa0476110:intron
TTCTCGACTTACAACAAGAA+AGG 0.541791 3_3:-79868170 Msa0476110:CDS
TTGACAAAACTTCACCTACT+GGG 0.542477 3_3:-79861668 Msa0476110:three_prime_UTR
ACTCCTTTATAAGCTGTCCT+AGG 0.545192 3_3:+79860680 None:intergenic
ATGTAATCGTGCTGATTACC+TGG 0.547620 3_3:-79867831 Msa0476110:CDS
TTGAGCCGGTTCAAACTGAA+AGG 0.550180 3_3:-79863696 Msa0476110:CDS
GGATGCTGGCTAGATCTACA+TGG 0.553110 3_3:-79861953 Msa0476110:CDS
CCGGTTCAAACTGAAAGGCC+AGG 0.554999 3_3:-79863691 Msa0476110:CDS
GGACTTGAGCTATTTGTTGG+AGG 0.555050 3_3:-79861108 Msa0476110:intron
TGGAGCAGACTTCGCTCAGA+AGG 0.556130 3_3:-79860951 Msa0476110:three_prime_UTR
CGATGAGCTATCTCATATGC+AGG 0.562275 3_3:-79867480 Msa0476110:intron
TTGATCTTTACAAGATACAT+GGG 0.562863 3_3:+79860347 None:intergenic
ATGATGACAACAGCTGCCAC+TGG 0.562931 3_3:+79867857 None:intergenic
TAATCTGATCAATGAGTGAT+CGG 0.568391 3_3:+79868211 None:intergenic
TGGATTGAATGAAGGTCGAC+TGG 0.576838 3_3:-79861139 Msa0476110:intron
ACTTCCAGGATGGTGTGCCT+AGG 0.576852 3_3:-79860697 Msa0476110:intron
AGAAGATAATATCTATACTA+CGG 0.577858 3_3:-79860269 Msa0476110:three_prime_UTR
AAGGCTGATTGATAAAGTCC+AGG 0.584981 3_3:-79867976 Msa0476110:intron
TTATCCAACCTCAGATGACA+TGG 0.598293 3_3:-79863407 Msa0476110:intron
AATTTGGTATATTTCAAGAG+TGG 0.599428 3_3:-79860859 Msa0476110:three_prime_UTR
TATAAAGTATAAAGATCAGT+GGG 0.600564 3_3:-79860903 Msa0476110:three_prime_UTR
TTGATCTCTACAAAATACAT+GGG 0.601855 3_3:+79860415 None:intergenic
TCTCTACAAAATACATGGGA+TGG 0.606050 3_3:+79860419 None:intergenic
ACATCATAGTCTCTTTAGCT+CGG 0.607010 3_3:+79860493 None:intergenic
ATGTTCTGCATACTTCGGGT+CGG 0.615835 3_3:+79861599 None:intergenic
ACACATACTTATCCTTGTCA+AGG 0.618408 3_3:+79863338 None:intergenic
AACAGAGTCATCATTCTCGA+AGG 0.620252 3_3:-79863509 Msa0476110:intron
TCTTTACAAGATACATGGGA+TGG 0.622612 3_3:+79860351 None:intergenic
TTTCAGGAAAAGATGTACAA+AGG 0.627774 3_3:-79867995 Msa0476110:intron
CAGAAGGCACGCAATATAGA+CGG 0.629864 3_3:-79860935 Msa0476110:three_prime_UTR
TCAAAGATTCTGGGCCAACA+AGG 0.632429 3_3:+79860621 None:intergenic
AGATATTATCTTCTACCCCA+AGG 0.632596 3_3:+79860278 None:intergenic
GGTACCACTATATACCATGA+AGG 0.635742 3_3:-79861813 Msa0476110:three_prime_UTR
GTTTGCGACATTTGTTTATG+GGG 0.635899 3_3:-79861860 Msa0476110:three_prime_UTR
GATCATAGAGTGTGGCCTTG+GGG 0.636583 3_3:-79860293 Msa0476110:three_prime_UTR
TCTCAACCAATCGTCCCAGT+AGG 0.642941 3_3:+79861654 None:intergenic
ATCGTGCTGATTACCTGGAG+AGG 0.643089 3_3:-79867826 Msa0476110:CDS
GATCAGATTAGCTTGCAACA+AGG 0.650241 3_3:-79868198 Msa0476110:CDS
AGGTACGGACGAGAATGTGA+TGG 0.652335 3_3:-79860458 Msa0476110:three_prime_UTR
TGTGGTTGAAAGTGTAGGTA+CGG 0.662240 3_3:-79860473 Msa0476110:three_prime_UTR
TATGATGTGGTTGAAAGTGT+AGG 0.663245 3_3:-79860478 Msa0476110:three_prime_UTR
ACTATCACCAAAATGGCCGA+AGG 0.673152 3_3:-79861925 Msa0476110:CDS
GTATAAAGTATAAAGATCAG+TGG 0.683838 3_3:-79860904 Msa0476110:three_prime_UTR
GATGCTGGCTAGATCTACAT+GGG 0.685395 3_3:-79861952 Msa0476110:CDS
TATGGCAACTCTCCTTGACA+AGG 0.700285 3_3:-79863350 Msa0476110:CDS
AGATTAAAAGAGAATCACAA+AGG 0.714494 3_3:-79861634 Msa0476110:three_prime_UTR
GAGCTAAAGAGACTATGATG+TGG 0.723249 3_3:-79860491 Msa0476110:three_prime_UTR
GATACTGTGATCATAGAGTG+TGG 0.744326 3_3:-79860301 Msa0476110:three_prime_UTR
AATTACATACAGCAACAGCG+AGG 0.779431 3_3:+79868341 None:intergenic
CTGGATGTAGATGAACACCA+AGG 0.780942 3_3:+79868494 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+AGG + chr3_3:79860715-79860734 None:intergenic 0.0%
!!! TTTATAAATTTAAATTTTTT+GGG + chr3_3:79863516-79863535 None:intergenic 0.0%
!!! TTTTATAAATTTAAATTTTT+TGG + chr3_3:79863517-79863536 None:intergenic 0.0%
!! AATAAATTGTTGAATAATAA+TGG + chr3_3:79861003-79861022 None:intergenic 10.0%
!!! AAATTTTTTGAAATTTATTG+GGG + chr3_3:79863458-79863477 None:intergenic 10.0%
!!! CAAATTTTTTGAAATTTATT+GGG + chr3_3:79863459-79863478 None:intergenic 10.0%
!! CTATTTAAAAAAAAAAATCA+GGG + chr3_3:79865794-79865813 None:intergenic 10.0%
!! ACTATTTAAAAAAAAAAATC+AGG + chr3_3:79865795-79865814 None:intergenic 10.0%
!! AATTCATAATAGTTTATTAT+AGG - chr3_3:79866208-79866227 Msa0476110:intron 10.0%
!! AGAAATATTATTAAAATTTG+AGG + chr3_3:79867266-79867285 None:intergenic 10.0%
!! AATAAATAAACAAACATTTC+AGG - chr3_3:79860725-79860744 Msa0476110:intron 15.0%
!! TGATAGATACAAAATTAAAT+AGG - chr3_3:79861547-79861566 Msa0476110:intron 15.0%
!! TGCAATTAAAAATAAGTTAA+AGG - chr3_3:79862636-79862655 Msa0476110:intron 15.0%
!!! ATTCAATACATAAACATTTT+GGG + chr3_3:79862944-79862963 None:intergenic 15.0%
!!! AATTCAATACATAAACATTT+TGG + chr3_3:79862945-79862964 None:intergenic 15.0%
!!! ATTTTTCAAATTTTGCATTT+TGG - chr3_3:79863401-79863420 Msa0476110:intron 15.0%
!!! GCAAATTTTTTGAAATTTAT+TGG + chr3_3:79863460-79863479 None:intergenic 15.0%
!! CATTACTAAATATATTTGTT+TGG + chr3_3:79863582-79863601 None:intergenic 15.0%
!! ACAAATATATTTAGTAATGA+AGG - chr3_3:79863583-79863602 Msa0476110:intron 15.0%
!!! TTTGAAGAATTTAGAATTTT+AGG + chr3_3:79863634-79863653 None:intergenic 15.0%
!!! TACCATATTTTGTTTAATAT+TGG - chr3_3:79863783-79863802 Msa0476110:intron 15.0%
!!! ACCATATTTTGTTTAATATT+GGG - chr3_3:79863784-79863803 Msa0476110:intron 15.0%
!!! TGAATGTTTTTTTTTTTTGA+AGG - chr3_3:79864586-79864605 Msa0476110:intron 15.0%
!!! TAAGTTAATATCTATTTTTG+CGG + chr3_3:79865868-79865887 None:intergenic 15.0%
!! CTACTAAAGTATAAAAATTA+AGG + chr3_3:79866842-79866861 None:intergenic 15.0%
!! CATAGAATAAATTAAAAACT+TGG + chr3_3:79866962-79866981 None:intergenic 15.0%
!!! AAAAGTATTTAAGTTTTTAC+TGG + chr3_3:79867294-79867313 None:intergenic 15.0%
!!! TTTAGCTTTTTTAATATTGT+TGG + chr3_3:79867757-79867776 None:intergenic 15.0%
!! AAATTAAGGTTAAAAGATAG+AGG + chr3_3:79860271-79860290 None:intergenic 20.0%
!! GAATAATAATGGCATAAAAT+AGG + chr3_3:79860992-79861011 None:intergenic 20.0%
!!! TTGTATTTTTCAGATATCAA+AGG - chr3_3:79861022-79861041 Msa0476110:intron 20.0%
!!! TTTTTTATGTATACACTTCT+AGG - chr3_3:79861084-79861103 Msa0476110:intron 20.0%
!!! TGTAATTGCTTTTATTATAC+AGG - chr3_3:79861193-79861212 Msa0476110:intron 20.0%
!!! GATAAAAGAGTATAAATAAG+AGG + chr3_3:79862348-79862367 None:intergenic 20.0%
!!! GTTATCTGAAATTAAGTTAA+TGG - chr3_3:79862667-79862686 Msa0476110:intron 20.0%
!!! TTAGAGAATTTTCAAAATGA+TGG - chr3_3:79863293-79863312 Msa0476110:intron 20.0%
!! AAATTTGGAAATTGAAAGTA+GGG + chr3_3:79863491-79863510 None:intergenic 20.0%
!!! ATTTCATTGTCATCATTTTT+GGG + chr3_3:79863544-79863563 None:intergenic 20.0%
!!! AATTTCATTGTCATCATTTT+TGG + chr3_3:79863545-79863564 None:intergenic 20.0%
!! ACTAAATATATTTGTTTGGA+TGG + chr3_3:79863578-79863597 None:intergenic 20.0%
!! AAAATATGGTATTACATTTG+TGG + chr3_3:79863774-79863793 None:intergenic 20.0%
!!! TTGTCTAAAAGTATGAAAAT+TGG + chr3_3:79864411-79864430 None:intergenic 20.0%
!!! ATTCACTATACATGTTTTTA+AGG - chr3_3:79865455-79865474 Msa0476110:intron 20.0%
!! AATTTAACATTATCCATTCT+AGG - chr3_3:79865498-79865517 Msa0476110:intron 20.0%
!! GATATAAAGCTACATAAATA+AGG - chr3_3:79865654-79865673 Msa0476110:intron 20.0%
!! AGGTTAAAAAAAACAAAATC+AGG - chr3_3:79865816-79865835 Msa0476110:intron 20.0%
!! CATTGAAATTGATGTAAATA+GGG + chr3_3:79866580-79866599 None:intergenic 20.0%
!! AAAATTTATCAGAATAGCAT+TGG + chr3_3:79866707-79866726 None:intergenic 20.0%
!!! AAACTTAAATACTTTTGTGT+TGG - chr3_3:79867298-79867317 Msa0476110:intron 20.0%
!!! AACTTAAATACTTTTGTGTT+GGG - chr3_3:79867299-79867318 Msa0476110:intron 20.0%
!! TATAAAGTATAAAGATCAGT+GGG - chr3_3:79867833-79867852 Msa0476110:CDS 20.0%
!! AAAGGGAAAATAGAAAAAAA+GGG + chr3_3:79867964-79867983 None:intergenic 20.0%
!! AAAAGGGAAAATAGAAAAAA+AGG + chr3_3:79867965-79867984 None:intergenic 20.0%
!! AGAAGCAACAAAAAAAATAT+AGG + chr3_3:79868015-79868034 None:intergenic 20.0%
!! ATTGAATAAATTCTTAATGC+TGG - chr3_3:79868149-79868168 Msa0476110:CDS 20.0%
!! TTGAATAAATTCTTAATGCT+GGG - chr3_3:79868150-79868169 Msa0476110:CDS 20.0%
!! AGAAGATAATATCTATACTA+CGG - chr3_3:79868467-79868486 Msa0476110:intron 20.0%
! GAAACGAAACGAATAAATTA+AGG + chr3_3:79860285-79860304 None:intergenic 25.0%
! AAAGGAAATCTTGAAGAAAT+GGG + chr3_3:79861048-79861067 None:intergenic 25.0%
! TAAAGGAAATCTTGAAGAAA+TGG + chr3_3:79861049-79861068 None:intergenic 25.0%
!! ATTTCCTTTATTTGTATCAC+AGG - chr3_3:79861059-79861078 Msa0476110:intron 25.0%
! AATACCTGTGATACAAATAA+AGG + chr3_3:79861066-79861085 None:intergenic 25.0%
! CAGTTCTTAGGAATTTATTA+TGG - chr3_3:79861111-79861130 Msa0476110:three_prime_UTR 25.0%
!!! ATTGCTTTTATTATACAGGA+TGG - chr3_3:79861197-79861216 Msa0476110:intron 25.0%
!!! CGAATGAACTTTAAAATTGA+CGG - chr3_3:79861762-79861781 Msa0476110:three_prime_UTR 25.0%
! TAAGAGATCAAGGATAAATT+GGG + chr3_3:79861939-79861958 None:intergenic 25.0%
! ATAAGAGATCAAGGATAAAT+TGG + chr3_3:79861940-79861959 None:intergenic 25.0%
!! AAGAATATATTTTCACACCT+AGG + chr3_3:79861996-79862015 None:intergenic 25.0%
!!! ACTATTTTGGTCATATATCT+AGG + chr3_3:79862095-79862114 None:intergenic 25.0%
! TGAGGAATTGATCAAAAATA+TGG - chr3_3:79862198-79862217 Msa0476110:intron 25.0%
!! AGACTTTTGAATTGAATATG+TGG + chr3_3:79862305-79862324 None:intergenic 25.0%
!! ATATGATTTGTAAGTTTGGT+AGG + chr3_3:79862474-79862493 None:intergenic 25.0%
!! ACACATATGATTTGTAAGTT+TGG + chr3_3:79862478-79862497 None:intergenic 25.0%
! ATATAGATTTGAAGATTGAG+AGG - chr3_3:79862540-79862559 Msa0476110:intron 25.0%
!!! TCCATTGTTTTTGTTTCTTA+TGG + chr3_3:79862566-79862585 None:intergenic 25.0%
! TGACTTGAATTATGAATCAA+TGG + chr3_3:79862777-79862796 None:intergenic 25.0%
! TGAATCTTGAGTTAATTACA+AGG - chr3_3:79862969-79862988 Msa0476110:intron 25.0%
! CTAAATTATCATCCAAACAA+TGG + chr3_3:79863277-79863296 None:intergenic 25.0%
! AATTTGGAAATTGAAAGTAG+GGG + chr3_3:79863490-79863509 None:intergenic 25.0%
! CAAATTTGGAAATTGAAAGT+AGG + chr3_3:79863492-79863511 None:intergenic 25.0%
! CTACTTTCAATTTCCAAATT+TGG - chr3_3:79863490-79863509 Msa0476110:intron 25.0%
!!! TAAATTTTTTGGGCCAAATT+TGG + chr3_3:79863506-79863525 None:intergenic 25.0%
! GCCCAATATTAAACAAAATA+TGG + chr3_3:79863788-79863807 None:intergenic 25.0%
! CACTCTTTATAAACTCATTT+CGG - chr3_3:79863850-79863869 Msa0476110:intron 25.0%
! ACTCTTTATAAACTCATTTC+GGG - chr3_3:79863851-79863870 Msa0476110:intron 25.0%
!!! GCATTATCTCTATTTTTTGT+GGG - chr3_3:79863873-79863892 Msa0476110:intron 25.0%
!! ATTTTCAATATAGTCTGACT+TGG - chr3_3:79864357-79864376 Msa0476110:intron 25.0%
! TTAGACAATAGTTTCTCAAT+CGG - chr3_3:79864423-79864442 Msa0476110:intron 25.0%
! ATTTGTGTGTTTAATGTTCT+TGG - chr3_3:79864448-79864467 Msa0476110:intron 25.0%
! TCGTAAAACAGTAACATTAA+TGG - chr3_3:79864491-79864510 Msa0476110:intron 25.0%
! CGTAAAACAGTAACATTAAT+GGG - chr3_3:79864492-79864511 Msa0476110:intron 25.0%
! GTAAAACAGTAACATTAATG+GGG - chr3_3:79864493-79864512 Msa0476110:intron 25.0%
! AATTCCAAATTACAGATTGT+TGG + chr3_3:79864651-79864670 None:intergenic 25.0%
! ATTACTCGTTTAATAGTACT+TGG - chr3_3:79864668-79864687 Msa0476110:intron 25.0%
! CTTTATCGAGATCAAAATAT+TGG + chr3_3:79864909-79864928 None:intergenic 25.0%
! TCAAAGTAATCAAAGAAATC+AGG + chr3_3:79865363-79865382 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG - chr3_3:79865941-79865960 Msa0476110:intron 25.0%
!!! ATCAACGATAGATTCTTTTT+TGG + chr3_3:79865992-79866011 None:intergenic 25.0%
!!! CCTAGAGCTATAATTTTTTT+TGG + chr3_3:79866242-79866261 None:intergenic 25.0%
! CCAAAAAAAATTATAGCTCT+AGG - chr3_3:79866239-79866258 Msa0476110:intron 25.0%
! GCATTGAAATTGATGTAAAT+AGG + chr3_3:79866581-79866600 None:intergenic 25.0%
! AAAAATTAAGGATATGCCTT+CGG + chr3_3:79866830-79866849 None:intergenic 25.0%
! AGATTAAAAGAGAATCACAA+AGG - chr3_3:79867102-79867121 Msa0476110:intron 25.0%
! CATTACATGATTATATGTGT+AGG - chr3_3:79867214-79867233 Msa0476110:intron 25.0%
! TATATTTGAACAGTTCTTGT+CGG - chr3_3:79867336-79867355 Msa0476110:intron 25.0%
! ATGGAAAATACTCATATACT+AGG + chr3_3:79867414-79867433 None:intergenic 25.0%
!! AAATCGAAGTACTTCTAAAA+GGG + chr3_3:79867438-79867457 None:intergenic 25.0%
!! AAAATCGAAGTACTTCTAAA+AGG + chr3_3:79867439-79867458 None:intergenic 25.0%
! AGAATGATGTTATATTACTG+TGG - chr3_3:79867577-79867596 Msa0476110:intron 25.0%
!!! AAATTTTGTTTTTCCCTTTC+AGG - chr3_3:79867710-79867729 Msa0476110:intron 25.0%
! ATAACATATTTGTCCTGAAA+GGG + chr3_3:79867726-79867745 None:intergenic 25.0%
! TATAACATATTTGTCCTGAA+AGG + chr3_3:79867727-79867746 None:intergenic 25.0%
! GTATAAAGTATAAAGATCAG+TGG - chr3_3:79867832-79867851 Msa0476110:CDS 25.0%
! AATTTGGTATATTTCAAGAG+TGG - chr3_3:79867877-79867896 Msa0476110:intron 25.0%
! TTGATCTCTACAAAATACAT+GGG + chr3_3:79868324-79868343 None:intergenic 25.0%
! TTGATCTTTACAAGATACAT+GGG + chr3_3:79868392-79868411 None:intergenic 25.0%
! TTTGATCTTTACAAGATACA+TGG + chr3_3:79868393-79868412 None:intergenic 25.0%
!! AAGATCAAAATTTTGTCTTG+TGG - chr3_3:79868404-79868423 Msa0476110:intron 25.0%
!!! TTTTTCAGAGTTATACATTG+CGG + chr3_3:79868571-79868590 None:intergenic 25.0%
! AAGCTAAATGTTATAAAGCT+AGG + chr3_3:79868616-79868635 None:intergenic 25.0%
!! CGAAATTTTGGTGTGATTTT+CGG - chr3_3:79860200-79860219 Msa0476110:three_prime_UTR 30.0%
TATGCAAAGCAAAGCAAATA+TGG + chr3_3:79860439-79860458 None:intergenic 30.0%
TAATCTGATCAATGAGTGAT+CGG + chr3_3:79860528-79860547 None:intergenic 30.0%
TTTCAGGAAAAGATGTACAA+AGG - chr3_3:79860741-79860760 Msa0476110:intron 30.0%
AGGAGTAACGTAAAGAAAAT+AGG + chr3_3:79860972-79860991 None:intergenic 30.0%
AAATTCAGACGTCAAAAGTA+AGG - chr3_3:79861223-79861242 Msa0476110:intron 30.0%
TGTATTCACCTTACTTTCAA+AGG - chr3_3:79861317-79861336 Msa0476110:intron 30.0%
! AGTAATAGCCTTTGAAAGTA+AGG + chr3_3:79861328-79861347 None:intergenic 30.0%
TTAATTAAATGTGCTCGAGT+AGG - chr3_3:79861468-79861487 Msa0476110:intron 30.0%
TATCTATCAATCTCACTTGA+GGG + chr3_3:79861536-79861555 None:intergenic 30.0%
! GGGCTTTATAAAGAATATGA+TGG + chr3_3:79861661-79861680 None:intergenic 30.0%
TATTCTTTATAAAGCCCTTC+AGG - chr3_3:79861664-79861683 Msa0476110:three_prime_UTR 30.0%
GATTAGATGTTATTCCTGAA+GGG + chr3_3:79861681-79861700 None:intergenic 30.0%
AATAACATCTAATCCTCTCA+AGG - chr3_3:79861687-79861706 Msa0476110:three_prime_UTR 30.0%
TCATAAATGCAATACAAGCT+AGG + chr3_3:79861793-79861812 None:intergenic 30.0%
AGCTTGTATTGCATTTATGA+TGG - chr3_3:79861793-79861812 Msa0476110:three_prime_UTR 30.0%
GCTTGTATTGCATTTATGAT+GGG - chr3_3:79861794-79861813 Msa0476110:three_prime_UTR 30.0%
! ATCGACATAATTGTGGATTT+TGG - chr3_3:79861846-79861865 Msa0476110:three_prime_UTR 30.0%
!! AAGTCTTCTAAGGACTATTT+TGG + chr3_3:79862108-79862127 None:intergenic 30.0%
AAAATAGTCCTTAGAAGACT+TGG - chr3_3:79862107-79862126 Msa0476110:intron 30.0%
CTCATATCTCTTAGATTAAG+GGG + chr3_3:79862182-79862201 None:intergenic 30.0%
CCTCATATCTCTTAGATTAA+GGG + chr3_3:79862183-79862202 None:intergenic 30.0%
TCCTCATATCTCTTAGATTA+AGG + chr3_3:79862184-79862203 None:intergenic 30.0%
AATATGTGGAAATACTTGTG+GGG + chr3_3:79862291-79862310 None:intergenic 30.0%
GAATATGTGGAAATACTTGT+GGG + chr3_3:79862292-79862311 None:intergenic 30.0%
TGAATATGTGGAAATACTTG+TGG + chr3_3:79862293-79862312 None:intergenic 30.0%
GCCATAAGAAACAAAAACAA+TGG - chr3_3:79862562-79862581 Msa0476110:intron 30.0%
ATAAAAGGCAATTACACTCA+TGG + chr3_3:79862694-79862713 None:intergenic 30.0%
TTATGAATCAATGGCATATC+AGG + chr3_3:79862768-79862787 None:intergenic 30.0%
GTTCTCTCAAATCTAATAGT+GGG + chr3_3:79862912-79862931 None:intergenic 30.0%
AGTTCTCTCAAATCTAATAG+TGG + chr3_3:79862913-79862932 None:intergenic 30.0%
TGTAAGTGAATTCCATTGTT+TGG - chr3_3:79863262-79863281 Msa0476110:intron 30.0%
!! GCAAAATTTTGGAAAATGTG+AGG + chr3_3:79863428-79863447 None:intergenic 30.0%
GAGTTAGTATCATTAGAATC+AGG - chr3_3:79863726-79863745 Msa0476110:intron 30.0%
!!! GGCATTATCTCTATTTTTTG+TGG - chr3_3:79863872-79863891 Msa0476110:intron 30.0%
TTCCATATTCAAGTAGAACT+CGG - chr3_3:79864036-79864055 Msa0476110:intron 30.0%
ATGTTACAGTAAAATGTGCA+AGG - chr3_3:79864174-79864193 Msa0476110:intron 30.0%
ATGTTACACTAAAACGTGTA+AGG - chr3_3:79864303-79864322 Msa0476110:intron 30.0%
ATGCAAAAATTGTTCAACAG+TGG + chr3_3:79864386-79864405 None:intergenic 30.0%
! TGTTACTGTTTTACGAAGAT+TGG + chr3_3:79864487-79864506 None:intergenic 30.0%
ATACATATGTGAACACAAGT+TGG + chr3_3:79864524-79864543 None:intergenic 30.0%
!!! GAAATAGCATTGTGTCATTT+TGG + chr3_3:79864566-79864585 None:intergenic 30.0%
GTTTAATAGTACTTGGATTG+AGG - chr3_3:79864675-79864694 Msa0476110:intron 30.0%
GATGAGTAATTCAAATTCAG+TGG - chr3_3:79864714-79864733 Msa0476110:intron 30.0%
!!! CCTAAAATCTAGTTTTCAAG+GGG + chr3_3:79864832-79864851 None:intergenic 30.0%
!!! GCCTAAAATCTAGTTTTCAA+GGG + chr3_3:79864833-79864852 None:intergenic 30.0%
TTTCAATAATCTGTGATGCA+TGG - chr3_3:79864938-79864957 Msa0476110:intron 30.0%
TTTCAAATAGAGGACACAAA+GGG + chr3_3:79865122-79865141 None:intergenic 30.0%
! TTTTCAAATAGAGGACACAA+AGG + chr3_3:79865123-79865142 None:intergenic 30.0%
!!! AGGAGTATCTTTTCAAATAG+AGG + chr3_3:79865132-79865151 None:intergenic 30.0%
! GGGTTAATTAATACCTTTTC+AGG - chr3_3:79865158-79865177 Msa0476110:intron 30.0%
CTATCACTGCTGAAAATATA+TGG - chr3_3:79865289-79865308 Msa0476110:intron 30.0%
!! CTTTGATTACTTTGAAGCTA+TGG - chr3_3:79865368-79865387 Msa0476110:intron 30.0%
GTAATAGAATCTATCGTTGA+TGG - chr3_3:79865890-79865909 Msa0476110:intron 30.0%
GCATAAAAATATGCAAGGTT+CGG - chr3_3:79865946-79865965 Msa0476110:intron 30.0%
CATAAAAATATGCAAGGTTC+GGG - chr3_3:79865947-79865966 Msa0476110:intron 30.0%
ATAAAAATATGCAAGGTTCG+GGG - chr3_3:79865948-79865967 Msa0476110:intron 30.0%
!!! GATAGATTCTTTTTTGGTAG+TGG + chr3_3:79865986-79866005 None:intergenic 30.0%
TTAGTGGAAAAGACTTATGT+GGG + chr3_3:79866265-79866284 None:intergenic 30.0%
!! GTAATATTAGTTTGCATGAC+AGG - chr3_3:79866498-79866517 Msa0476110:intron 30.0%
CCACACATTGTAATATTTAG+GGG + chr3_3:79866676-79866695 None:intergenic 30.0%
CCCACACATTGTAATATTTA+GGG + chr3_3:79866677-79866696 None:intergenic 30.0%
CCCTAAATATTACAATGTGT+GGG - chr3_3:79866674-79866693 Msa0476110:intron 30.0%
ACCCACACATTGTAATATTT+AGG + chr3_3:79866678-79866697 None:intergenic 30.0%
TGTTTGCGACATTTGTTTAT+GGG - chr3_3:79866875-79866894 Msa0476110:intron 30.0%
TTATATGTTCTGCATACTTC+GGG + chr3_3:79867144-79867163 None:intergenic 30.0%
GTTATATGTTCTGCATACTT+CGG + chr3_3:79867145-79867164 None:intergenic 30.0%
GTATGCAGAACATATAACTT+TGG - chr3_3:79867147-79867166 Msa0476110:intron 30.0%
!!! AGAAGTACTTCGATTTTTAC+AGG - chr3_3:79867442-79867461 Msa0476110:intron 30.0%
!! GAAGTACTTCGATTTTTACA+GGG - chr3_3:79867443-79867462 Msa0476110:intron 30.0%
! TATTACTGTGGATTGAATGA+AGG - chr3_3:79867589-79867608 Msa0476110:intron 30.0%
GAAAACATTGCTCAACAATT+TGG - chr3_3:79867861-79867880 Msa0476110:CDS 30.0%
CTTGATCTCTACAAAATACA+TGG + chr3_3:79868325-79868344 None:intergenic 30.0%
TATCTATACTACGGATAGAA+AGG - chr3_3:79868476-79868495 Msa0476110:intron 30.0%
AAGAAATGCACATCGAATAA+AGG + chr3_3:79868523-79868542 None:intergenic 30.0%
! TTTGGGAAATGGCGAAATTT+TGG - chr3_3:79860188-79860207 Msa0476110:three_prime_UTR 35.0%
TTCTCGACTTACAACAAGAA+AGG - chr3_3:79860566-79860585 Msa0476110:three_prime_UTR 35.0%
CTTGAACAAGAGACTTGATT+TGG + chr3_3:79860615-79860634 None:intergenic 35.0%
! TTCTCCATCCTCAACTTTTT+AGG - chr3_3:79860854-79860873 Msa0476110:intron 35.0%
GGCTATTACTTGTCTTCTTA+TGG - chr3_3:79861338-79861357 Msa0476110:intron 35.0%
TAAACAGTAGAGTAGTGTAG+AGG - chr3_3:79861441-79861460 Msa0476110:intron 35.0%
!! AGGACTTGTTGTTTAGTTGT+AGG - chr3_3:79861488-79861507 Msa0476110:intron 35.0%
GTATCTATCAATCTCACTTG+AGG + chr3_3:79861537-79861556 None:intergenic 35.0%
TCTTCTTCAGCCATGTAAAA+CGG - chr3_3:79861622-79861641 Msa0476110:three_prime_UTR 35.0%
!! CAAATTCAAGCCGTTTTACA+TGG + chr3_3:79861635-79861654 None:intergenic 35.0%
GGATTAGATGTTATTCCTGA+AGG + chr3_3:79861682-79861701 None:intergenic 35.0%
AAAACATGTTTCACCTTGAG+AGG + chr3_3:79861703-79861722 None:intergenic 35.0%
CATTCGTCGTGTAAAAACAT+TGG + chr3_3:79861748-79861767 None:intergenic 35.0%
! GTATTGCATTTATGATGGGA+AGG - chr3_3:79861798-79861817 Msa0476110:three_prime_UTR 35.0%
!! TTTGAGCATCGACATAATTG+TGG - chr3_3:79861839-79861858 Msa0476110:three_prime_UTR 35.0%
AAAATCCAGCTAAAGAGGTT+TGG + chr3_3:79861907-79861926 None:intergenic 35.0%
! AAACCTCTTTAGCTGGATTT+TGG - chr3_3:79861906-79861925 Msa0476110:exon 35.0%
! AACCTCTTTAGCTGGATTTT+GGG - chr3_3:79861907-79861926 Msa0476110:exon 35.0%
AAATGCGTGATAAGAGATCA+AGG + chr3_3:79861949-79861968 None:intergenic 35.0%
! TATATTTTCACACCTAGGAC+TGG + chr3_3:79861991-79862010 None:intergenic 35.0%
AAAAGCTAGCTCAAAAGGTA+AGG + chr3_3:79862138-79862157 None:intergenic 35.0%
CACTAAAAAGCTAGCTCAAA+AGG + chr3_3:79862143-79862162 None:intergenic 35.0%
CCCTTAATCTAAGAGATATG+AGG - chr3_3:79862180-79862199 Msa0476110:intron 35.0%
ATATGTGGAAATACTTGTGG+GGG + chr3_3:79862290-79862309 None:intergenic 35.0%
GAGGAAAGAAAGAGTAGTAA+GGG + chr3_3:79862329-79862348 None:intergenic 35.0%
AGAGGAAAGAAAGAGTAGTA+AGG + chr3_3:79862330-79862349 None:intergenic 35.0%
TTATCCTAGACTCTCTATCA+AGG - chr3_3:79862363-79862382 Msa0476110:intron 35.0%
! TAATTGCATTTTTGCCCTTC+TGG + chr3_3:79862624-79862643 None:intergenic 35.0%
CACGAAATGGAGAATCAAAT+GGG + chr3_3:79862806-79862825 None:intergenic 35.0%
GATGTAACCAACTCAAATGT+TGG + chr3_3:79863049-79863068 None:intergenic 35.0%
!! ACATTTGAGTTGGTTACATC+TGG - chr3_3:79863049-79863068 Msa0476110:intron 35.0%
! TATTCTCTTAAGAGCGTGTT+TGG - chr3_3:79863207-79863226 Msa0476110:CDS 35.0%
! TTGGATGTAGGAATGTTTTG+AGG - chr3_3:79863226-79863245 Msa0476110:intron 35.0%
!! TGGATGTAGGAATGTTTTGA+GGG - chr3_3:79863227-79863246 Msa0476110:intron 35.0%
! GGGGTCAATTTGCAAAATTT+TGG + chr3_3:79863439-79863458 None:intergenic 35.0%
!! ATTTAGCTTTAGAGCGTGTT+TGG + chr3_3:79863675-79863694 None:intergenic 35.0%
ATCATTAGAATCAGGCATAC+TGG - chr3_3:79863734-79863753 Msa0476110:intron 35.0%
!!! TCTCTATTTTTTGTGGGACT+TGG - chr3_3:79863879-79863898 Msa0476110:intron 35.0%
!!! CTCTATTTTTTGTGGGACTT+GGG - chr3_3:79863880-79863899 Msa0476110:intron 35.0%
TGGTGTGTGGATATAAATAG+TGG - chr3_3:79863942-79863961 Msa0476110:intron 35.0%
!! AAATAGTGGATGACCCTAAA+TGG - chr3_3:79863956-79863975 Msa0476110:intron 35.0%
!! GAACCTCTAAGATCCATTTA+GGG + chr3_3:79863972-79863991 None:intergenic 35.0%
!! TGAACCTCTAAGATCCATTT+AGG + chr3_3:79863973-79863992 None:intergenic 35.0%
! AGTCTTGTATCCCTAGAAAT+CGG - chr3_3:79864059-79864078 Msa0476110:intron 35.0%
AGCACCAACAATCTGTAATT+TGG - chr3_3:79864644-79864663 Msa0476110:intron 35.0%
ATTCAAATTCAGTGGCATAG+TGG - chr3_3:79864722-79864741 Msa0476110:intron 35.0%
! GTCAAGTAGTATGGGATTTT+TGG - chr3_3:79864780-79864799 Msa0476110:intron 35.0%
!! AAGTAGTATGGGATTTTTGG+TGG - chr3_3:79864783-79864802 Msa0476110:intron 35.0%
! CCCCTTGAAAACTAGATTTT+AGG - chr3_3:79864829-79864848 Msa0476110:intron 35.0%
!!! CGCCTAAAATCTAGTTTTCA+AGG + chr3_3:79864834-79864853 None:intergenic 35.0%
! TGAAAACTAGATTTTAGGCG+AGG - chr3_3:79864834-79864853 Msa0476110:intron 35.0%
! GAAAACTAGATTTTAGGCGA+GGG - chr3_3:79864835-79864854 Msa0476110:intron 35.0%
TAGTAAGCAATTAACTCTCC+TGG + chr3_3:79865066-79865085 None:intergenic 35.0%
TTGAAAAGATACTCCTCAAG+AGG - chr3_3:79865136-79865155 Msa0476110:intron 35.0%
TGAAAAGATACTCCTCAAGA+GGG - chr3_3:79865137-79865156 Msa0476110:intron 35.0%
GTATTAATTAACCCCTCTTG+AGG + chr3_3:79865152-79865171 None:intergenic 35.0%
!!! CTTTTCAGGTCATTACAAGT+GGG - chr3_3:79865172-79865191 Msa0476110:intron 35.0%
ATCATTCTCGAAGGTGAAAT+GGG - chr3_3:79865236-79865255 Msa0476110:intron 35.0%
! ATTTTCAGCAGTGATAGAAG+AGG + chr3_3:79865286-79865305 None:intergenic 35.0%
ACACATACTTATCCTTGTCA+AGG + chr3_3:79865401-79865420 None:intergenic 35.0%
AGGATAAGTATGTGTTCAAG+AGG - chr3_3:79865406-79865425 Msa0476110:intron 35.0%
ATAAGTATGTGTTCAAGAGG+AGG - chr3_3:79865409-79865428 Msa0476110:intron 35.0%
TAAGTATGTGTTCAAGAGGA+GGG - chr3_3:79865410-79865429 Msa0476110:intron 35.0%
TATCCATTCTAGGTCCATTA+TGG - chr3_3:79865508-79865527 Msa0476110:intron 35.0%
GTTTCGTCATGGAATGATAA+TGG - chr3_3:79865533-79865552 Msa0476110:intron 35.0%
ATGATCCATGTAAGTTCAGT+CGG - chr3_3:79865573-79865592 Msa0476110:intron 35.0%
! ATAACTTGTGATCGCCAAAT+TGG - chr3_3:79865607-79865626 Msa0476110:intron 35.0%
TTGCATATCCCTAACCAATT+TGG + chr3_3:79865624-79865643 None:intergenic 35.0%
TTAAGAGTTGTATCTGCGTT+CGG + chr3_3:79865724-79865743 None:intergenic 35.0%
ACGCAGATACAACTCTTAAA+TGG - chr3_3:79865725-79865744 Msa0476110:intron 35.0%
!!! ATTCTTTTTTGGTAGTGGCT+GGG + chr3_3:79865981-79866000 None:intergenic 35.0%
GTTTGTAAGAACCTACTCAA+GGG - chr3_3:79866096-79866115 Msa0476110:intron 35.0%
! TTACAATTTTGCCCTTGAGT+AGG + chr3_3:79866110-79866129 None:intergenic 35.0%
GTTAGTGGAAAAGACTTATG+TGG + chr3_3:79866266-79866285 None:intergenic 35.0%
TTATGTTGAAGGAGAAGACT+AGG + chr3_3:79866299-79866318 None:intergenic 35.0%
CATTTACCTTGAGACTACTT+AGG + chr3_3:79866630-79866649 None:intergenic 35.0%
CCCCTAAATATTACAATGTG+TGG - chr3_3:79866673-79866692 Msa0476110:intron 35.0%
GTCGCAAACACAAACAATAA+TGG + chr3_3:79866865-79866884 None:intergenic 35.0%
GTGTTTGCGACATTTGTTTA+TGG - chr3_3:79866874-79866893 Msa0476110:intron 35.0%
GTTTGCGACATTTGTTTATG+GGG - chr3_3:79866876-79866895 Msa0476110:intron 35.0%
AATTCCAGTTTAGGAACTGT+TGG - chr3_3:79866902-79866921 Msa0476110:intron 35.0%
TACTCCTTCATGGTATATAG+TGG + chr3_3:79866930-79866949 None:intergenic 35.0%
TTTGACAAAACTTCACCTAC+TGG - chr3_3:79867067-79867086 Msa0476110:intron 35.0%
TTGACAAAACTTCACCTACT+GGG - chr3_3:79867068-79867087 Msa0476110:intron 35.0%
TATATGTGTAGGAACTTCAC+AGG - chr3_3:79867225-79867244 Msa0476110:intron 35.0%
!! ATTTTTACAGGGCTCTAGTT+TGG - chr3_3:79867454-79867473 Msa0476110:intron 35.0%
!! TTTTTACAGGGCTCTAGTTT+GGG - chr3_3:79867455-79867474 Msa0476110:intron 35.0%
ATAAAGCATGTATAGCTACC+TGG + chr3_3:79867526-79867545 None:intergenic 35.0%
! AATGGACTTGAGCTATTTGT+TGG - chr3_3:79867625-79867644 Msa0476110:intron 35.0%
TGTGTAACAAAATGATGCTG+TGG - chr3_3:79867682-79867701 Msa0476110:CDS 35.0%
AAAAAAGCTAAACCTGTCTC+TGG - chr3_3:79867765-79867784 Msa0476110:intron 35.0%
TGGTATATTTCAAGAGTGGA+AGG - chr3_3:79867881-79867900 Msa0476110:intron 35.0%
TAGTTTACTCGTCAACTAGA+TGG + chr3_3:79867938-79867957 None:intergenic 35.0%
TCTACACACGAGAAGAAAAA+GGG + chr3_3:79867981-79868000 None:intergenic 35.0%
ATCTACACACGAGAAGAAAA+AGG + chr3_3:79867982-79868001 None:intergenic 35.0%
GAAGTAGCTTCAAAGATTCT+GGG + chr3_3:79868127-79868146 None:intergenic 35.0%
TGAAGTAGCTTCAAAGATTC+TGG + chr3_3:79868128-79868147 None:intergenic 35.0%
CTGAAAACAACAACTCTCTT+GGG + chr3_3:79868197-79868216 None:intergenic 35.0%
TCTGAAAACAACAACTCTCT+TGG + chr3_3:79868198-79868217 None:intergenic 35.0%
ACATCATAGTCTCTTTAGCT+CGG + chr3_3:79868246-79868265 None:intergenic 35.0%
! TATGATGTGGTTGAAAGTGT+AGG - chr3_3:79868258-79868277 Msa0476110:intron 35.0%
TCTCTACAAAATACATGGGA+TGG + chr3_3:79868320-79868339 None:intergenic 35.0%
! GAGATCAAGATTTTGTCTTG+TGG - chr3_3:79868336-79868355 Msa0476110:intron 35.0%
TCTTTACAAGATACATGGGA+TGG + chr3_3:79868388-79868407 None:intergenic 35.0%
AGATATTATCTTCTACCCCA+AGG + chr3_3:79868461-79868480 None:intergenic 35.0%
! TTTGGTGGTTACGAAGAAGA+AGG - chr3_3:79860129-79860148 Msa0476110:three_prime_UTR 40.0%
AACGAAACGAAACGAAACGA+AGG + chr3_3:79860329-79860348 None:intergenic 40.0%
TTGCGAAAAGTCTCATCTGA+AGG + chr3_3:79860353-79860372 None:intergenic 40.0%
AATTACATACAGCAACAGCG+AGG + chr3_3:79860398-79860417 None:intergenic 40.0%
!! GATCAGATTAGCTTGCAACA+AGG - chr3_3:79860538-79860557 Msa0476110:three_prime_UTR 40.0%
AAGGCTGATTGATAAAGTCC+AGG - chr3_3:79860760-79860779 Msa0476110:intron 40.0%
GGAACCTAAAAAGTTGAGGA+TGG + chr3_3:79860861-79860880 None:intergenic 40.0%
CACTGGAACCTAAAAAGTTG+AGG + chr3_3:79860865-79860884 None:intergenic 40.0%
!!! CTCAACTTTTTAGGTTCCAG+TGG - chr3_3:79860863-79860882 Msa0476110:three_prime_UTR 40.0%
!! ATGTAATCGTGCTGATTACC+TGG - chr3_3:79860905-79860924 Msa0476110:three_prime_UTR 40.0%
! ACAAAAGCTTGTGCTGGTAA+AGG + chr3_3:79861406-79861425 None:intergenic 40.0%
CTTTCAACAAAAGCTTGTGC+TGG + chr3_3:79861412-79861431 None:intergenic 40.0%
GTAGGACACAATAATACCGT+TGG - chr3_3:79861506-79861525 Msa0476110:intron 40.0%
AACATCCAAACCTCTTTAGC+TGG - chr3_3:79861899-79861918 Msa0476110:exon 40.0%
AAGACTAAACATCAGGAGAG+TGG + chr3_3:79862039-79862058 None:intergenic 40.0%
ACTCTCCTGATGTTTAGTCT+TGG - chr3_3:79862038-79862057 Msa0476110:intron 40.0%
! CTCTCCTGATGTTTAGTCTT+GGG - chr3_3:79862039-79862058 Msa0476110:intron 40.0%
AGGATTGTCCAAGTCTTCTA+AGG + chr3_3:79862118-79862137 None:intergenic 40.0%
!! TAGCTTTTTAGTGCCGAGTT+AGG - chr3_3:79862150-79862169 Msa0476110:intron 40.0%
TAAGGGGTTTATGCCTAACT+CGG + chr3_3:79862166-79862185 None:intergenic 40.0%
CAGGTTCTCATGTATAACGT+GGG + chr3_3:79862263-79862282 None:intergenic 40.0%
ACTACCTTGATAGAGAGTCT+AGG + chr3_3:79862370-79862389 None:intergenic 40.0%
GGGTTACAAGATCGTGAATA+GGG - chr3_3:79862424-79862443 Msa0476110:intron 40.0%
GGTTACAAGATCGTGAATAG+GGG - chr3_3:79862425-79862444 Msa0476110:intron 40.0%
GTTACAAGATCGTGAATAGG+GGG - chr3_3:79862426-79862445 Msa0476110:intron 40.0%
! CTGGTTCATTTGCTAGCATA+TGG + chr3_3:79862605-79862624 None:intergenic 40.0%
ATGCTAGCAAATGAACCAGA+AGG - chr3_3:79862606-79862625 Msa0476110:intron 40.0%
TGCTAGCAAATGAACCAGAA+GGG - chr3_3:79862607-79862626 Msa0476110:intron 40.0%
GCACGAAATGGAGAATCAAA+TGG + chr3_3:79862807-79862826 None:intergenic 40.0%
ACCTACACCAACATTTGAGT+TGG - chr3_3:79863039-79863058 Msa0476110:intron 40.0%
ACCAACTCAAATGTTGGTGT+AGG + chr3_3:79863043-79863062 None:intergenic 40.0%
TTGCAAGCTATCCTAACAAC+TGG - chr3_3:79863136-79863155 Msa0476110:intron 40.0%
TAGTGTTTGTGCCAGTTGTT+AGG + chr3_3:79863150-79863169 None:intergenic 40.0%
! TTAAGAGCGTGTTTGGATGT+AGG - chr3_3:79863214-79863233 Msa0476110:CDS 40.0%
!! ACACGCTCTAAAGCTAAATC+TGG - chr3_3:79863676-79863695 Msa0476110:CDS 40.0%
! ACATTTGTGGATTACTCTCC+AGG + chr3_3:79863761-79863780 None:intergenic 40.0%
CGGTTTAGTAAGGATGAGTT+AGG + chr3_3:79863810-79863829 None:intergenic 40.0%
! CCTTACAAGTCGGTTTAGTA+AGG + chr3_3:79863820-79863839 None:intergenic 40.0%
!! CCTTACTAAACCGACTTGTA+AGG - chr3_3:79863817-79863836 Msa0476110:intron 40.0%
TGACCCTAAATGGATCTTAG+AGG - chr3_3:79863966-79863985 Msa0476110:intron 40.0%
CTCCGAGTTCTACTTGAATA+TGG + chr3_3:79864041-79864060 None:intergenic 40.0%
GTCTTGTATCCCTAGAAATC+GGG - chr3_3:79864060-79864079 Msa0476110:intron 40.0%
TCTTGTATCCCTAGAAATCG+GGG - chr3_3:79864061-79864080 Msa0476110:intron 40.0%
AGATTTCACCCCGATTTCTA+GGG + chr3_3:79864072-79864091 None:intergenic 40.0%
AAGATTTCACCCCGATTTCT+AGG + chr3_3:79864073-79864092 None:intergenic 40.0%
CTGTAACATGTCGAAGCTAA+AGG + chr3_3:79864163-79864182 None:intergenic 40.0%
AAATTCAGTGGCATAGTGGT+AGG - chr3_3:79864726-79864745 Msa0476110:intron 40.0%
AATTCAGTGGCATAGTGGTA+GGG - chr3_3:79864727-79864746 Msa0476110:intron 40.0%
AATCCCATACTACTTGACGT+GGG + chr3_3:79864778-79864797 None:intergenic 40.0%
AAATCCCATACTACTTGACG+TGG + chr3_3:79864779-79864798 None:intergenic 40.0%
GGTGGAATACTTAAGAGACT+TGG - chr3_3:79864801-79864820 Msa0476110:intron 40.0%
CGAGGGTTTCACAAATTCTT+GGG - chr3_3:79864852-79864871 Msa0476110:intron 40.0%
TCTGTGATGCATGGTGAATA+AGG - chr3_3:79864947-79864966 Msa0476110:intron 40.0%
GAAAAGATACTCCTCAAGAG+GGG - chr3_3:79865138-79865157 Msa0476110:intron 40.0%
CCACTTGTAATGACCTGAAA+AGG + chr3_3:79865174-79865193 None:intergenic 40.0%
!!! CCTTTTCAGGTCATTACAAG+TGG - chr3_3:79865171-79865190 Msa0476110:intron 40.0%
AACAGAGTCATCATTCTCGA+AGG - chr3_3:79865227-79865246 Msa0476110:intron 40.0%
CATCATTCTCGAAGGTGAAA+TGG - chr3_3:79865235-79865254 Msa0476110:intron 40.0%
! TGTCATCTGAGGTTGGATAA+AGG + chr3_3:79865329-79865348 None:intergenic 40.0%
TTATCCAACCTCAGATGACA+TGG - chr3_3:79865329-79865348 Msa0476110:intron 40.0%
! ATTTCCATGTCATCTGAGGT+TGG + chr3_3:79865336-79865355 None:intergenic 40.0%
!! TGCTATTTCCATGTCATCTG+AGG + chr3_3:79865340-79865359 None:intergenic 40.0%
AACAACCGACTGAACTTACA+TGG + chr3_3:79865581-79865600 None:intergenic 40.0%
TTGTGATCGCCAAATTGGTT+AGG - chr3_3:79865612-79865631 Msa0476110:intron 40.0%
TGTGATCGCCAAATTGGTTA+GGG - chr3_3:79865613-79865632 Msa0476110:intron 40.0%
GGTTAGGGATATGCAAGTTA+TGG - chr3_3:79865628-79865647 Msa0476110:intron 40.0%
!!! TTCTTTTTTGGTAGTGGCTG+GGG + chr3_3:79865980-79865999 None:intergenic 40.0%
!!! GATTCTTTTTTGGTAGTGGC+TGG + chr3_3:79865982-79866001 None:intergenic 40.0%
! GTTTACGATGCTGACTACAT+TGG + chr3_3:79866059-79866078 None:intergenic 40.0%
TAAACACGAGGAACGTAACA+CGG - chr3_3:79866074-79866093 Msa0476110:intron 40.0%
GGTTTGTAAGAACCTACTCA+AGG - chr3_3:79866095-79866114 Msa0476110:intron 40.0%
CTAGGTCTAGGTTAAGTTAG+TGG + chr3_3:79866281-79866300 None:intergenic 40.0%
!! TTGTTTGTTGTTTCCTGCTG+CGG + chr3_3:79866352-79866371 None:intergenic 40.0%
CAACAAACAAGCAGATCTTG+TGG - chr3_3:79866362-79866381 Msa0476110:intron 40.0%
AAACAAGCAGATCTTGTGGT+GGG - chr3_3:79866366-79866385 Msa0476110:intron 40.0%
CTGATTGTGTTCAGTTCAGT+TGG - chr3_3:79866425-79866444 Msa0476110:intron 40.0%
GGGATGAACTATCACCAAAA+TGG - chr3_3:79866804-79866823 Msa0476110:intron 40.0%
ATGGGGAAGAATTCCAGTTT+AGG - chr3_3:79866893-79866912 Msa0476110:intron 40.0%
GGTACCACTATATACCATGA+AGG - chr3_3:79866923-79866942 Msa0476110:intron 40.0%
GAATGCTTAGTACTCCTTCA+TGG + chr3_3:79866940-79866959 None:intergenic 40.0%
AACAGTTCTTGTCGGTACAA+AGG - chr3_3:79867344-79867363 Msa0476110:intron 40.0%
! GAAGTACTTCTAAAAGGGCA+TGG + chr3_3:79867433-79867452 None:intergenic 40.0%
TGGACTTCATTCAGCTTGAT+TGG + chr3_3:79867506-79867525 None:intergenic 40.0%
AATCAAGCTGAATGAAGTCC+AGG - chr3_3:79867505-79867524 Msa0476110:CDS 40.0%
ACTCCTTTATAAGCTGTCCT+AGG + chr3_3:79868059-79868078 None:intergenic 40.0%
AACAAGGAATATACGCTTCG+TGG + chr3_3:79868102-79868121 None:intergenic 40.0%
ACGAAGCGTATATTCCTTGT+TGG - chr3_3:79868101-79868120 Msa0476110:intron 40.0%
GAGCTAAAGAGACTATGATG+TGG - chr3_3:79868245-79868264 Msa0476110:CDS 40.0%
! TGTGGTTGAAAGTGTAGGTA+CGG - chr3_3:79868263-79868282 Msa0476110:intron 40.0%
! TTTTGTCTTGTGGAGTAGTG+TGG - chr3_3:79868346-79868365 Msa0476110:intron 40.0%
GATACTGTGATCATAGAGTG+TGG - chr3_3:79868435-79868454 Msa0476110:intron 40.0%
! AGACGACTGAGCGAGTTTTT+GGG - chr3_3:79860171-79860190 Msa0476110:three_prime_UTR 45.0%
!! CTGAGCGAGTTTTTGGGAAA+TGG - chr3_3:79860177-79860196 Msa0476110:three_prime_UTR 45.0%
TCTTCTCTTTGTTGCAGCCT+TGG - chr3_3:79860225-79860244 Msa0476110:three_prime_UTR 45.0%
CTGGATGTAGATGAACACCA+AGG + chr3_3:79860245-79860264 None:intergenic 45.0%
!! CTTGGTGTTCATCTACATCC+AGG - chr3_3:79860243-79860262 Msa0476110:three_prime_UTR 45.0%
!! GGTTAAAAGATAGAGGCACC+TGG + chr3_3:79860264-79860283 None:intergenic 45.0%
! CAGAATTGATAGTCCTCTCC+AGG + chr3_3:79860926-79860945 None:intergenic 45.0%
CTTCTAGGTGTGCAGTTCTT+AGG - chr3_3:79861099-79861118 Msa0476110:intron 45.0%
CGATGAGCTATCTCATATGC+AGG - chr3_3:79861256-79861275 Msa0476110:three_prime_UTR 45.0%
! AAAGCTTGTGCTGGTAAAGG+TGG + chr3_3:79861403-79861422 None:intergenic 45.0%
!! AGAAGCGTTACTCCTTGCTA+AGG + chr3_3:79861605-79861624 None:intergenic 45.0%
!! ATGGGAAGGTGTTTGCCTTA+GGG - chr3_3:79861812-79861831 Msa0476110:three_prime_UTR 45.0%
CCCTACATCAGCTAGAGATA+CGG + chr3_3:79861872-79861891 None:intergenic 45.0%
CCGTATCTCTAGCTGATGTA+GGG - chr3_3:79861869-79861888 Msa0476110:three_prime_UTR 45.0%
GTCCCAAAATCCAGCTAAAG+AGG + chr3_3:79861912-79861931 None:intergenic 45.0%
! AGGACTGGACATCTAAAGCA+TGG + chr3_3:79861976-79861995 None:intergenic 45.0%
! TGCTTTAGATGTCCAGTCCT+AGG - chr3_3:79861976-79861995 Msa0476110:CDS 45.0%
ATCAGGAGAGTGGACAAATG+TGG + chr3_3:79862029-79862048 None:intergenic 45.0%
CACACCCAAGACTAAACATC+AGG + chr3_3:79862046-79862065 None:intergenic 45.0%
!! TGTTTAGTCTTGGGTGTGAG+AGG - chr3_3:79862048-79862067 Msa0476110:intron 45.0%
!! GTTTAGTCTTGGGTGTGAGA+GGG - chr3_3:79862049-79862068 Msa0476110:intron 45.0%
CCAGGTTCTCATGTATAACG+TGG + chr3_3:79862264-79862283 None:intergenic 45.0%
CCACGTTATACATGAGAACC+TGG - chr3_3:79862261-79862280 Msa0476110:intron 45.0%
GGGGTTACAAGATCGTGAAT+AGG - chr3_3:79862423-79862442 Msa0476110:intron 45.0%
! CAAAAGACGAGAGCACGAAA+TGG + chr3_3:79862819-79862838 None:intergenic 45.0%
GCAACTGTTCTGTCACTGAT+TGG - chr3_3:79862861-79862880 Msa0476110:intron 45.0%
!! TAATAGTGGGCACTGATCAG+AGG + chr3_3:79862899-79862918 None:intergenic 45.0%
ATCAGCTACATGTAGCTGAC+TGG + chr3_3:79862995-79863014 None:intergenic 45.0%
GCTTGTAGTAGAAGATCGCA+TGG + chr3_3:79863105-79863124 None:intergenic 45.0%
!! CTTTAGAGCGTGTTTGGATG+AGG + chr3_3:79863669-79863688 None:intergenic 45.0%
!! CTAAACCGACTTGTAAGGTG+AGG - chr3_3:79863822-79863841 Msa0476110:intron 45.0%
AGACTCCTCACCTTACAAGT+CGG + chr3_3:79863830-79863849 None:intergenic 45.0%
ATTCAGTGGCATAGTGGTAG+GGG - chr3_3:79864728-79864747 Msa0476110:intron 45.0%
TACTACTTGACGTGGGACTT+GGG + chr3_3:79864771-79864790 None:intergenic 45.0%
ATACTACTTGACGTGGGACT+TGG + chr3_3:79864772-79864791 None:intergenic 45.0%
AAGTCCCACGTCAAGTAGTA+TGG - chr3_3:79864771-79864790 Msa0476110:intron 45.0%
AGTCCCACGTCAAGTAGTAT+GGG - chr3_3:79864772-79864791 Msa0476110:intron 45.0%
GCGAGGGTTTCACAAATTCT+TGG - chr3_3:79864851-79864870 Msa0476110:intron 45.0%
! GCAGCACTTAGATTTTGAGC+CGG - chr3_3:79865026-79865045 Msa0476110:intron 45.0%
! TTGAGCCGGTTCAAACTGAA+AGG - chr3_3:79865040-79865059 Msa0476110:intron 45.0%
TATGGCAACTCTCCTTGACA+AGG - chr3_3:79865386-79865405 Msa0476110:intron 45.0%
!! CAGCCATAATGGACCTAGAA+TGG + chr3_3:79865514-79865533 None:intergenic 45.0%
CCATGACGAAACAGCCATAA+TGG + chr3_3:79865525-79865544 None:intergenic 45.0%
! CCATTATGGCTGTTTCGTCA+TGG - chr3_3:79865522-79865541 Msa0476110:intron 45.0%
!! ATCAGGGTAAAGAGTGTCAC+AGG + chr3_3:79865778-79865797 None:intergenic 45.0%
TAGTCAGCATCGTAAACACG+AGG - chr3_3:79866062-79866081 Msa0476110:intron 45.0%
TGAAGGAGAAGACTAGGTCT+AGG + chr3_3:79866293-79866312 None:intergenic 45.0%
GTTGCTTAAAGTTGCAGAGG+CGG + chr3_3:79866326-79866345 None:intergenic 45.0%
CTGGTTGCTTAAAGTTGCAG+AGG + chr3_3:79866329-79866348 None:intergenic 45.0%
CAAACAAGCAGATCTTGTGG+TGG - chr3_3:79866365-79866384 Msa0476110:intron 45.0%
AACAAGCAGATCTTGTGGTG+GGG - chr3_3:79866367-79866386 Msa0476110:intron 45.0%
CAGTGTTTGTGCCAACTGTT+AGG - chr3_3:79866449-79866468 Msa0476110:intron 45.0%
! TCACAAGCTAGCCTAACAGT+TGG + chr3_3:79866463-79866482 None:intergenic 45.0%
ACGCAACCTAAGTAGTCTCA+AGG - chr3_3:79866621-79866640 Msa0476110:intron 45.0%
TGCAGACGAACTTTATCGCT+CGG - chr3_3:79866739-79866758 Msa0476110:intron 45.0%
! ACTTCTTTCCTGGACTAGGA+TGG - chr3_3:79866762-79866781 Msa0476110:intron 45.0%
! GATGCTGGCTAGATCTACAT+GGG - chr3_3:79866784-79866803 Msa0476110:intron 45.0%
ACTATCACCAAAATGGCCGA+AGG - chr3_3:79866811-79866830 Msa0476110:intron 45.0%
GGTACCAACAGTTCCTAAAC+TGG + chr3_3:79866909-79866928 None:intergenic 45.0%
ATGTTCTGCATACTTCGGGT+CGG + chr3_3:79867140-79867159 None:intergenic 45.0%
TGGATTGAATGAAGGTCGAC+TGG - chr3_3:79867597-79867616 Msa0476110:intron 45.0%
! GGACTTGAGCTATTTGTTGG+AGG - chr3_3:79867628-79867647 Msa0476110:intron 45.0%
! GCTATTTGTTGGAGGTGAGA+TGG - chr3_3:79867636-79867655 Msa0476110:intron 45.0%
! CAGAAGGCACGCAATATAGA+CGG - chr3_3:79867801-79867820 Msa0476110:intron 45.0%
! TGTTGCTTCTGTTCACTTCC+AGG - chr3_3:79868025-79868044 Msa0476110:intron 45.0%
GTGCCTAGGACAGCTTATAA+AGG - chr3_3:79868053-79868072 Msa0476110:intron 45.0%
TCAAAGATTCTGGGCCAACA+AGG + chr3_3:79868118-79868137 None:intergenic 45.0%
TGATCATAGAGTGTGGCCTT+GGG - chr3_3:79868442-79868461 Msa0476110:intron 45.0%
!!! ATTTTTTTTTTTAAATAGTT+AGG - chr3_3:79865796-79865815 Msa0476110:intron 5.0%
! GAGACGACTGAGCGAGTTTT+TGG - chr3_3:79860170-79860189 Msa0476110:three_prime_UTR 50.0%
GGCTACATTCTTGCTCTCGA+CGG + chr3_3:79860594-79860613 None:intergenic 50.0%
CTTTCTTAGTGTGCAGCAGC+AGG - chr3_3:79860679-79860698 Msa0476110:three_prime_UTR 50.0%
CAGCAAGCAAGCAAGCAAAC+AGG + chr3_3:79860801-79860820 None:intergenic 50.0%
ATGATGACAACAGCTGCCAC+TGG + chr3_3:79860882-79860901 None:intergenic 50.0%
AGTGGCAGCTGTTGTCATCA+TGG - chr3_3:79860881-79860900 Msa0476110:three_prime_UTR 50.0%
!! ATCGTGCTGATTACCTGGAG+AGG - chr3_3:79860910-79860929 Msa0476110:three_prime_UTR 50.0%
TACTCCTTGCTAAGGCAACG+AGG + chr3_3:79861597-79861616 None:intergenic 50.0%
!! GATGGGAAGGTGTTTGCCTT+AGG - chr3_3:79861811-79861830 Msa0476110:three_prime_UTR 50.0%
CGATGCTCAAACTCACCCTA+AGG + chr3_3:79861830-79861849 None:intergenic 50.0%
GCCGTATCTCTAGCTGATGT+AGG - chr3_3:79861868-79861887 Msa0476110:three_prime_UTR 50.0%
GGAGAGTGGACAAATGTGGA+TGG + chr3_3:79862025-79862044 None:intergenic 50.0%
!! AAATACTTGTGGGGGTGTCC+AGG + chr3_3:79862282-79862301 None:intergenic 50.0%
AGATCATCCTACGCAGGATC+AGG - chr3_3:79862398-79862417 Msa0476110:intron 50.0%
GATCATCCTACGCAGGATCA+GGG - chr3_3:79862399-79862418 Msa0476110:intron 50.0%
AGAATCAGGCATACTGGTCC+TGG - chr3_3:79863740-79863759 Msa0476110:intron 50.0%
! CCTGGCCTTTCAGTTTGAAC+CGG + chr3_3:79865048-79865067 None:intergenic 50.0%
! GGTCATTACAAGTGGGCTCT+TGG - chr3_3:79865179-79865198 Msa0476110:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr3_3:79865918-79865937 Msa0476110:intron 50.0%
!! GAGGCGGCTTGTTATGTTGA+AGG + chr3_3:79866310-79866329 None:intergenic 50.0%
ACAAGCAGATCTTGTGGTGG+GGG - chr3_3:79866368-79866387 Msa0476110:intron 50.0%
TATCGCTCGGACTTCTTTCC+TGG - chr3_3:79866752-79866771 Msa0476110:intron 50.0%
TCGGACTTCTTTCCTGGACT+AGG - chr3_3:79866758-79866777 Msa0476110:intron 50.0%
! GGATGCTGGCTAGATCTACA+TGG - chr3_3:79866783-79866802 Msa0476110:intron 50.0%
! GGATATGCCTTCGGCCATTT+TGG + chr3_3:79866821-79866840 None:intergenic 50.0%
ACTTCACCTACTGGGACGAT+TGG - chr3_3:79867076-79867095 Msa0476110:intron 50.0%
TCTCAACCAATCGTCCCAGT+AGG + chr3_3:79867085-79867104 None:intergenic 50.0%
GAAGGTCGACTGGAAGTCAA+TGG - chr3_3:79867607-79867626 Msa0476110:intron 50.0%
GCTTCTGTTCACTTCCAGGA+TGG - chr3_3:79868029-79868048 Msa0476110:intron 50.0%
AGGTACGGACGAGAATGTGA+TGG - chr3_3:79868278-79868297 Msa0476110:intron 50.0%
GTGATCATAGAGTGTGGCCT+TGG - chr3_3:79868441-79868460 Msa0476110:intron 50.0%
! GATCATAGAGTGTGGCCTTG+GGG - chr3_3:79868443-79868462 Msa0476110:intron 50.0%
AGGCAACTCTGAGCTCAACC+TGG + chr3_3:79860781-79860800 None:intergenic 55.0%
TGGTCGAGGCTTGTGAGGTA+AGG + chr3_3:79861383-79861402 None:intergenic 55.0%
AAAGGTGGTCGAGGCTTGTG+AGG + chr3_3:79861388-79861407 None:intergenic 55.0%
! TGTGCTGGTAAAGGTGGTCG+AGG + chr3_3:79861397-79861416 None:intergenic 55.0%
CTCACTTGAGGGACTGCCAA+CGG + chr3_3:79861525-79861544 None:intergenic 55.0%
AGAGCCTCGTTGCCTTAGCA+AGG - chr3_3:79861590-79861609 Msa0476110:three_prime_UTR 55.0%
GAGTCGAGATCATCCTACGC+AGG - chr3_3:79862392-79862411 Msa0476110:intron 55.0%
ATCCTACGCAGGATCAGGGA+GGG - chr3_3:79862403-79862422 Msa0476110:intron 55.0%
AGTGACAGAACAGTTGCGCG+TGG + chr3_3:79862858-79862877 None:intergenic 55.0%
! CTAGGCGTGAGGGAGTGTAT+TGG + chr3_3:79863912-79863931 None:intergenic 55.0%
ACACACCAAGCCCAACAGCT+AGG + chr3_3:79863930-79863949 None:intergenic 55.0%
!! TAGCTGTTGGGCTTGGTGTG+TGG - chr3_3:79863929-79863948 Msa0476110:intron 55.0%
TGGCATAGTGGTAGGGGCTT+GGG - chr3_3:79864734-79864753 Msa0476110:intron 55.0%
CCGGTTCAAACTGAAAGGCC+AGG - chr3_3:79865045-79865064 Msa0476110:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr3_3:79865917-79865936 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr3_3:79865914-79865933 Msa0476110:intron 55.0%
TTTAAGCAACCAGCCGCAGC+AGG - chr3_3:79866336-79866355 Msa0476110:intron 55.0%
!! TTGTTGTTTCCTGCTGCGGC+TGG + chr3_3:79866348-79866367 None:intergenic 55.0%
! TCCTGGACTAGGATGGATGC+TGG - chr3_3:79866769-79866788 Msa0476110:intron 55.0%
TGGAGCAGACTTCGCTCAGA+AGG - chr3_3:79867785-79867804 Msa0476110:intron 55.0%
ACTTCCAGGATGGTGTGCCT+AGG - chr3_3:79868039-79868058 Msa0476110:intron 55.0%
CATCCTACGCAGGATCAGGG+AGG - chr3_3:79862402-79862421 Msa0476110:intron 60.0%
TCCTACGCAGGATCAGGGAG+GGG - chr3_3:79862404-79862423 Msa0476110:intron 60.0%
ACTCCCTCACGCCTAGCTGT+TGG - chr3_3:79863916-79863935 Msa0476110:intron 60.0%
CTCCCTCACGCCTAGCTGTT+GGG - chr3_3:79863917-79863936 Msa0476110:intron 60.0%
AGCCCAACAGCTAGGCGTGA+GGG + chr3_3:79863922-79863941 None:intergenic 60.0%
AAGCCCAACAGCTAGGCGTG+AGG + chr3_3:79863923-79863942 None:intergenic 60.0%
TCACGCCTAGCTGTTGGGCT+TGG - chr3_3:79863922-79863941 Msa0476110:intron 60.0%
GTGGCATAGTGGTAGGGGCT+TGG - chr3_3:79864733-79864752 Msa0476110:intron 60.0%
! AGCAGATCTTGTGGTGGGGG+TGG - chr3_3:79866371-79866390 Msa0476110:intron 60.0%
! GCAGATCTTGTGGTGGGGGT+GGG - chr3_3:79866372-79866391 Msa0476110:intron 60.0%
! CAGATCTTGTGGTGGGGGTG+GGG - chr3_3:79866373-79866392 Msa0476110:intron 60.0%
GCCAGCATCCATCCTAGTCC+AGG + chr3_3:79866773-79866792 None:intergenic 60.0%
GCGAAGTCTGCTCCAGAGAC+AGG + chr3_3:79867780-79867799 None:intergenic 60.0%
CTGTCCTAGGCACACCATCC+TGG + chr3_3:79868046-79868065 None:intergenic 60.0%
ACCCCTCCCTGATCCTGCGT+AGG + chr3_3:79862408-79862427 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 79860116 79868642 79860116 ID=Msa0476110;Name=Msa0476110
chr3_3 mRNA 79860116 79868642 79860116 ID=Msa0476110-mRNA-1;Parent=Msa0476110;Name=Msa0476110-mRNA-1;_AED=0.15;_eAED=0.15;_QI=80|1|1|1|0.93|0.93|16|1201|286
chr3_3 exon 79860116 79860711 79860116 ID=Msa0476110-mRNA-1:exon:21694;Parent=Msa0476110-mRNA-1
chr3_3 exon 79860856 79861026 79860856 ID=Msa0476110-mRNA-1:exon:21693;Parent=Msa0476110-mRNA-1
chr3_3 exon 79861109 79861147 79861109 ID=Msa0476110-mRNA-1:exon:21692;Parent=Msa0476110-mRNA-1
chr3_3 exon 79861232 79861294 79861232 ID=Msa0476110-mRNA-1:exon:21691;Parent=Msa0476110-mRNA-1
chr3_3 exon 79861582 79862014 79861582 ID=Msa0476110-mRNA-1:exon:21690;Parent=Msa0476110-mRNA-1
chr3_3 exon 79863177 79863238 79863177 ID=Msa0476110-mRNA-1:exon:21689;Parent=Msa0476110-mRNA-1
chr3_3 exon 79863346 79863415 79863346 ID=Msa0476110-mRNA-1:exon:21688;Parent=Msa0476110-mRNA-1
chr3_3 exon 79863510 79863578 79863510 ID=Msa0476110-mRNA-1:exon:21687;Parent=Msa0476110-mRNA-1
chr3_3 exon 79863662 79863728 79863662 ID=Msa0476110-mRNA-1:exon:21686;Parent=Msa0476110-mRNA-1
chr3_3 exon 79867481 79867543 79867481 ID=Msa0476110-mRNA-1:exon:21685;Parent=Msa0476110-mRNA-1
chr3_3 exon 79867678 79867723 79867678 ID=Msa0476110-mRNA-1:exon:21684;Parent=Msa0476110-mRNA-1
chr3_3 exon 79867806 79867882 79867806 ID=Msa0476110-mRNA-1:exon:21683;Parent=Msa0476110-mRNA-1
chr3_3 exon 79867977 79868011 79867977 ID=Msa0476110-mRNA-1:exon:21682;Parent=Msa0476110-mRNA-1
chr3_3 exon 79868115 79868265 79868115 ID=Msa0476110-mRNA-1:exon:21681;Parent=Msa0476110-mRNA-1
chr3_3 exon 79868351 79868401 79868351 ID=Msa0476110-mRNA-1:exon:21680;Parent=Msa0476110-mRNA-1
chr3_3 exon 79868494 79868642 79868494 ID=Msa0476110-mRNA-1:exon:21679;Parent=Msa0476110-mRNA-1
chr3_3 five_prime_UTR 79868563 79868642 79868563 ID=Msa0476110-mRNA-1:five_prime_utr;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79868494 79868562 79868494 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79868351 79868401 79868351 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79868115 79868265 79868115 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79867977 79868011 79867977 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79867806 79867882 79867806 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79867678 79867723 79867678 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79867481 79867543 79867481 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79863662 79863728 79863662 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79863510 79863578 79863510 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79863346 79863415 79863346 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79863177 79863238 79863177 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 CDS 79861914 79862014 79861914 ID=Msa0476110-mRNA-1:cds;Parent=Msa0476110-mRNA-1
chr3_3 three_prime_UTR 79861582 79861913 79861582 ID=Msa0476110-mRNA-1:three_prime_utr;Parent=Msa0476110-mRNA-1
chr3_3 three_prime_UTR 79861232 79861294 79861232 ID=Msa0476110-mRNA-1:three_prime_utr;Parent=Msa0476110-mRNA-1
chr3_3 three_prime_UTR 79861109 79861147 79861109 ID=Msa0476110-mRNA-1:three_prime_utr;Parent=Msa0476110-mRNA-1
chr3_3 three_prime_UTR 79860856 79861026 79860856 ID=Msa0476110-mRNA-1:three_prime_utr;Parent=Msa0476110-mRNA-1
chr3_3 three_prime_UTR 79860116 79860711 79860116 ID=Msa0476110-mRNA-1:three_prime_utr;Parent=Msa0476110-mRNA-1
Gene Sequence

>Msa0476110

ATGGCGAAATTTTGGTGTGATTTTCGGTTTCTTCTCTTTGTTGCAGCCTTGGTGTTCATCTACATCCAGATGAGACTTTTCGCAACACAATCACAATATGCTGATCGCCTCGCTGTTGCTATTGAAGCTGAAAATCACTGTACAACTCAAATCCGATCACTCATTGATCAGATTAGCTTGCAACAAGGACGCATTCTCGACTTACAACAAGAAAGGAACCGTCGAGAGCAAGAATGTAGCCAAATCAAGTCTCTTGTTCAAGATCTTGAAAGAAAAGATGTACAAAGGCTGATTGATAAAGTCCAGGTTCCAGTGGCAGCTGTTGTCATCATGGCATGTAATCGTGCTGATTACCTGGAGAGGACTATCAATTCTGTATTGAAATATCAAAGGCCCATTTCTTCAAGATTTCCTTTATTTGTATCACAGGATGGATCAAATTCAGACGTCAAAAGTAAGGCTCTGAGCTACGATGAGCTATCTCATATGCAGCACTTAGATTTTGAGCCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTATAAGATTGCACGTCATTACAAGTGGGCTCTTGGTCAATTGTTCGACAAGCATAACTTCAACAGAGTCATCATTCTCGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTACTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCATGGAATGATAATGGACAGAAGCAGTTTGTACATGATCCATACGAACTTTATCGCTCGGACTTCTTTCCTGGACTAGGATGGATGCTGGCTAGATCTACATGGGATGAACTATCACCAAAATGGCCGAAGGCATATCCTTAA

Protein sequence

>Msa0476110

MAKFWCDFRFLLFVAALVFIYIQMRLFATQSQYADRLAVAIEAENHCTTQIRSLIDQISLQQGRILDLQQERNRREQECSQIKSLVQDLERKDVQRLIDKVQVPVAAVVIMACNRADYLERTINSVLKYQRPISSRFPLFVSQDGSNSDVKSKALSYDELSHMQHLDFEPVQTERPGELIAYYKIARHYKWALGQLFDKHNFNRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLARSTWDELSPKWPKAYP*