AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1429150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429150 MtrunA17_Chr3g0146031 98.252 286 5 0 1 286 1 286 0.0 585
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429150 AT4G38240.1 72.281 285 79 0 1 285 1 285 8.20e-160 452
Msa1429150 AT4G38240.2 72.281 285 79 0 1 285 1 285 8.20e-160 452
Msa1429150 AT4G38240.3 71.786 280 79 0 1 280 1 280 8.66e-156 442

Find 117 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTTGCGACATTTGTTTA+TGG 0.208583 tig0026448:-17166 Msa1429150:three_prime_UTR
GAAAACATTGCTCAACAATT+TGG 0.214206 tig0026448:-16179 Msa1429150:three_prime_UTR
GGATATGCCTTCGGCCATTT+TGG 0.228883 tig0026448:+17222 None:intergenic
TGAAGTAGCTTCAAAGATTC+TGG 0.231515 tig0026448:+15915 None:intergenic
TATCGCTCGGACTTCTTTCC+TGG 0.251249 tig0026448:-17288 Msa1429150:CDS
TTTGGGAAATGGCGAAATTT+TGG 0.251374 tig0026448:-23853 Msa1429150:exon
TAAAGGAAATCTTGAAGAAA+TGG 0.304704 tig0026448:+22995 None:intergenic
TATCCATTCTAGGTCCATTA+TGG 0.306360 tig0026448:-18533 Msa1429150:intron
TCTTCTCTTTGTTGCAGCCT+TGG 0.315376 tig0026448:-23816 Msa1429150:CDS
CTTGAACAAGAGACTTGATT+TGG 0.319300 tig0026448:+23429 None:intergenic
ATGGGGAAGAATTCCAGTTT+AGG 0.332261 tig0026448:-17147 Msa1429150:three_prime_UTR
AGAGAGGGTAATGTGAAATT+TGG 0.338184 tig0026448:-23930 None:intergenic
TGGACTTCATTCAGCTTGAT+TGG 0.364035 tig0026448:+16537 None:intergenic
TTATATGTTCTGCATACTTC+GGG 0.365657 tig0026448:+16899 None:intergenic
GGGATGAACTATCACCAAAA+TGG 0.369625 tig0026448:-17236 Msa1429150:CDS
GTCGCAAACACAAACAATAA+TGG 0.374080 tig0026448:+17178 None:intergenic
CCTGGCCTTTCAGTTTGAAC+CGG 0.375663 tig0026448:+18996 None:intergenic
GGTACCAACAGTTCCTAAAC+TGG 0.376344 tig0026448:+17134 None:intergenic
AAGAAATGCACATCGAATAA+AGG 0.381589 tig0026448:+15520 None:intergenic
GTTTCGTCATGGAATGATAA+TGG 0.381929 tig0026448:-18508 Msa1429150:CDS
AATGGACTTGAGCTATTTGT+TGG 0.383291 tig0026448:-16415 Msa1429150:three_prime_UTR
ATTGAATAAATTCTTAATGC+TGG 0.390236 tig0026448:-15891 Msa1429150:three_prime_UTR
CCATGACGAAACAGCCATAA+TGG 0.392943 tig0026448:+18519 None:intergenic
GAATGCTTAGTACTCCTTCA+TGG 0.395475 tig0026448:+17103 None:intergenic
AATACCTGTGATACAAATAA+AGG 0.404682 tig0026448:+22978 None:intergenic
CTTTGATTACTTTGAAGCTA+TGG 0.412034 tig0026448:-18673 Msa1429150:CDS
TGTTTGCGACATTTGTTTAT+GGG 0.423625 tig0026448:-17165 Msa1429150:three_prime_UTR
TCTGAAAACAACAACTCTCT+TGG 0.430336 tig0026448:+15845 None:intergenic
TCAAAGTAATCAAAGAAATC+AGG 0.439796 tig0026448:+18681 None:intergenic
TTTGACAAAACTTCACCTAC+TGG 0.441854 tig0026448:-16973 Msa1429150:three_prime_UTR
AAAGGAAATCTTGAAGAAAT+GGG 0.442893 tig0026448:+22996 None:intergenic
GTGATCATAGAGTGTGGCCT+TGG 0.443056 tig0026448:-15599 Msa1429150:three_prime_UTR
ACGAAGCGTATATTCCTTGT+TGG 0.443306 tig0026448:-15939 Msa1429150:three_prime_UTR
CTTGATCTCTACAAAATACA+TGG 0.445682 tig0026448:+15718 None:intergenic
GTGCCTAGGACAGCTTATAA+AGG 0.447968 tig0026448:-15987 Msa1429150:three_prime_UTR
CTGAAAACAACAACTCTCTT+GGG 0.451162 tig0026448:+15846 None:intergenic
GTTATATGTTCTGCATACTT+CGG 0.455588 tig0026448:+16898 None:intergenic
ATTTCCTTTATTTGTATCAC+AGG 0.466127 tig0026448:-22982 Msa1429150:intron
GGTCATTACAAGTGGGCTCT+TGG 0.466698 tig0026448:-18862 Msa1429150:CDS
TTGAATAAATTCTTAATGCT+GGG 0.469653 tig0026448:-15890 Msa1429150:three_prime_UTR
TGATCATAGAGTGTGGCCTT+GGG 0.471091 tig0026448:-15598 Msa1429150:three_prime_UTR
GAAGTAGCTTCAAAGATTCT+GGG 0.477829 tig0026448:+15916 None:intergenic
TCGGACTTCTTTCCTGGACT+AGG 0.478118 tig0026448:-17282 Msa1429150:CDS
AAGCTAAATGTTATAAAGCT+AGG 0.483202 tig0026448:+15427 None:intergenic
GCGAAGTCTGCTCCAGAGAC+AGG 0.486412 tig0026448:+16263 None:intergenic
TATCTATACTACGGATAGAA+AGG 0.487249 tig0026448:-15564 Msa1429150:three_prime_UTR
AAATTCAGACGTCAAAAGTA+AGG 0.488269 tig0026448:-22818 Msa1429150:CDS
AGTGGCAGCTGTTGTCATCA+TGG 0.497854 tig0026448:-23160 Msa1429150:CDS
ACTTCACCTACTGGGACGAT+TGG 0.499642 tig0026448:-16964 Msa1429150:three_prime_UTR
TAGTAAGCAATTAACTCTCC+TGG 0.506538 tig0026448:+18978 None:intergenic
TACTCCTTCATGGTATATAG+TGG 0.512049 tig0026448:+17113 None:intergenic
TTTGGTGGTTACGAAGAAGA+AGG 0.515940 tig0026448:-23912 Msa1429150:five_prime_UTR
TTTGATCTCTACAAGATACA+TGG 0.516981 tig0026448:+15650 None:intergenic
GAGGGTAATGTGAAATTTGG+TGG 0.518929 tig0026448:-23927 Msa1429150:five_prime_UTR
TGCAGACGAACTTTATCGCT+CGG 0.520518 tig0026448:-17301 Msa1429150:intron
AACAAGGAATATACGCTTCG+TGG 0.520785 tig0026448:+15941 None:intergenic
CTTGGTGTTCATCTACATCC+AGG 0.522745 tig0026448:-23798 Msa1429150:intron
GGCTACATTCTTGCTCTCGA+CGG 0.523455 tig0026448:+23450 None:intergenic
GTATGCAGAACATATAACTT+TGG 0.523714 tig0026448:-16893 Msa1429150:three_prime_UTR
AATTCCAGTTTAGGAACTGT+TGG 0.524104 tig0026448:-17138 Msa1429150:three_prime_UTR
TGGTATATTTCAAGAGTGGA+AGG 0.526230 tig0026448:-16159 Msa1429150:intron
GCCAGCATCCATCCTAGTCC+AGG 0.526290 tig0026448:+17270 None:intergenic
CAGAATTGATAGTCCTCTCC+AGG 0.527635 tig0026448:+23118 None:intergenic
ACTTCTTTCCTGGACTAGGA+TGG 0.531658 tig0026448:-17278 Msa1429150:CDS
TCCTGGACTAGGATGGATGC+TGG 0.534970 tig0026448:-17271 Msa1429150:CDS
CCATTATGGCTGTTTCGTCA+TGG 0.538200 tig0026448:-18519 Msa1429150:CDS
GAAGGTCGACTGGAAGTCAA+TGG 0.538850 tig0026448:-16433 Msa1429150:intron
AATCAAGCTGAATGAAGTCC+AGG 0.541494 tig0026448:-16535 Msa1429150:intron
TTCTCGACTTACAACAAGAA+AGG 0.541791 tig0026448:-23475 Msa1429150:CDS
TTGACAAAACTTCACCTACT+GGG 0.542477 tig0026448:-16972 Msa1429150:three_prime_UTR
ACTCCTTTATAAGCTGTCCT+AGG 0.545192 tig0026448:+15984 None:intergenic
ATGTAATCGTGCTGATTACC+TGG 0.547620 tig0026448:-23136 Msa1429150:CDS
TTGAGCCGGTTCAAACTGAA+AGG 0.550180 tig0026448:-19001 Msa1429150:CDS
GGATGCTGGCTAGATCTACA+TGG 0.553110 tig0026448:-17257 Msa1429150:CDS
CCGGTTCAAACTGAAAGGCC+AGG 0.554999 tig0026448:-18996 Msa1429150:CDS
GGACTTGAGCTATTTGTTGG+AGG 0.555050 tig0026448:-16412 Msa1429150:intron
TGGAGCAGACTTCGCTCAGA+AGG 0.556130 tig0026448:-16255 Msa1429150:three_prime_UTR
CGATGAGCTATCTCATATGC+AGG 0.562275 tig0026448:-22785 Msa1429150:intron
ATGATGACAACAGCTGCCAC+TGG 0.562931 tig0026448:+23162 None:intergenic
TAATCTGATCAATGAGTGAT+CGG 0.568391 tig0026448:+23516 None:intergenic
TGGATTGAATGAAGGTCGAC+TGG 0.576838 tig0026448:-16443 Msa1429150:intron
ACTTCCAGGATGGTGTGCCT+AGG 0.576852 tig0026448:-16001 Msa1429150:intron
AGAAGATAATATCTATACTA+CGG 0.577858 tig0026448:-15573 Msa1429150:three_prime_UTR
AAGGCTGATTGATAAAGTCC+AGG 0.584981 tig0026448:-23281 Msa1429150:intron
TTATCCAACCTCAGATGACA+TGG 0.598293 tig0026448:-18712 Msa1429150:intron
AATTTGGTATATTTCAAGAG+TGG 0.599428 tig0026448:-16163 Msa1429150:three_prime_UTR
TATAAAGTATAAAGATCAGT+GGG 0.600564 tig0026448:-16207 Msa1429150:three_prime_UTR
TTGATCTCTACAAAATACAT+GGG 0.601855 tig0026448:+15719 None:intergenic
TTGATCTCTACAAGATACAT+GGG 0.603625 tig0026448:+15651 None:intergenic
TCTCTACAAAATACATGGGA+TGG 0.606050 tig0026448:+15723 None:intergenic
ACATCATAGTCTCTTAAGCT+CGG 0.607010 tig0026448:+15797 None:intergenic
ATGTTCTGCATACTTCGGGT+CGG 0.615835 tig0026448:+16903 None:intergenic
ACACATACTTATCCTTGTCA+AGG 0.618408 tig0026448:+18643 None:intergenic
AACAGAGTCATCATTCTCGA+AGG 0.620252 tig0026448:-18814 Msa1429150:intron
TTTCAGGAAAAGATGTACAA+AGG 0.627774 tig0026448:-23300 Msa1429150:intron
CAGAAGGCACGCAATATAGA+CGG 0.629864 tig0026448:-16239 Msa1429150:three_prime_UTR
TCAAAGATTCTGGGCCAACA+AGG 0.632429 tig0026448:+15925 None:intergenic
AGATATTATCTTCTACCCCA+AGG 0.632596 tig0026448:+15582 None:intergenic
GGTACCACTATATACCATGA+AGG 0.635742 tig0026448:-17117 Msa1429150:three_prime_UTR
GTTTGCGACATTTGTTTATG+GGG 0.635899 tig0026448:-17164 Msa1429150:three_prime_UTR
GATCATAGAGTGTGGCCTTG+GGG 0.636583 tig0026448:-15597 Msa1429150:three_prime_UTR
TCTCAACCAATCGTCCCAGT+AGG 0.642941 tig0026448:+16958 None:intergenic
ATCGTGCTGATTACCTGGAG+AGG 0.643089 tig0026448:-23131 Msa1429150:CDS
GATCAGATTAGCTTGCAACA+AGG 0.650241 tig0026448:-23503 Msa1429150:CDS
TCTCTACAAGATACATGGGA+TGG 0.650691 tig0026448:+15655 None:intergenic
AGGTACGGACGAGAATGTGA+TGG 0.652335 tig0026448:-15762 Msa1429150:three_prime_UTR
TGTGGTTGAAAGTGTAGGTA+CGG 0.662240 tig0026448:-15777 Msa1429150:three_prime_UTR
TATGATGTGGTTGAAAGTGT+AGG 0.663245 tig0026448:-15782 Msa1429150:three_prime_UTR
ACTATCACCAAAATGGCCGA+AGG 0.673152 tig0026448:-17229 Msa1429150:CDS
GTATAAAGTATAAAGATCAG+TGG 0.683838 tig0026448:-16208 Msa1429150:three_prime_UTR
GATGCTGGCTAGATCTACAT+GGG 0.685395 tig0026448:-17256 Msa1429150:CDS
TATGGCAACTCTCCTTGACA+AGG 0.700285 tig0026448:-18655 Msa1429150:CDS
AGATTAAAAGAGAATCACAA+AGG 0.714494 tig0026448:-16938 Msa1429150:three_prime_UTR
GAGCTTAAGAGACTATGATG+TGG 0.723249 tig0026448:-15795 Msa1429150:three_prime_UTR
GATACTGTGATCATAGAGTG+TGG 0.744326 tig0026448:-15605 Msa1429150:three_prime_UTR
AATTACATACAGCAACAGCG+AGG 0.779431 tig0026448:+23646 None:intergenic
CTGGATGTAGATGAACACCA+AGG 0.780942 tig0026448:+23799 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+AGG + tig0026448:16019-16038 None:intergenic 0.0%
!!! TTTATAAATTTAAATTTTTT+GGG + tig0026448:18820-18839 None:intergenic 0.0%
!!! TTTTATAAATTTAAATTTTT+TGG + tig0026448:18821-18840 None:intergenic 0.0%
!! AATAAATTGTTGAATAATAA+TGG + tig0026448:16307-16326 None:intergenic 10.0%
!!! AAATTTTTTGAAATTTATTG+GGG + tig0026448:18762-18781 None:intergenic 10.0%
!!! CAAATTTTTTGAAATTTATT+GGG + tig0026448:18763-18782 None:intergenic 10.0%
!! CTATTTAAAAAAAAAAATCA+GGG + tig0026448:21098-21117 None:intergenic 10.0%
!! ACTATTTAAAAAAAAAAATC+AGG + tig0026448:21099-21118 None:intergenic 10.0%
!! AATTCATAATAGTTTATTAT+AGG - tig0026448:21513-21532 Msa1429150:intron 10.0%
!! AGAAATATTATTAAAATTTG+AGG + tig0026448:22571-22590 None:intergenic 10.0%
!! AATAAATAAACAAACATTTC+AGG - tig0026448:16029-16048 Msa1429150:intron 15.0%
!! TGATAGATACAAAATTAAAT+AGG - tig0026448:16851-16870 Msa1429150:intron 15.0%
!! TGCAATTAAAAATAAGTTAA+AGG - tig0026448:17940-17959 Msa1429150:intron 15.0%
!!! ATTCAATACATAAACATTTT+GGG + tig0026448:18248-18267 None:intergenic 15.0%
!!! AATTCAATACATAAACATTT+TGG + tig0026448:18249-18268 None:intergenic 15.0%
!!! ATTTTTCAAATTTTGCATTT+TGG - tig0026448:18705-18724 Msa1429150:intron 15.0%
!!! GCAAATTTTTTGAAATTTAT+TGG + tig0026448:18764-18783 None:intergenic 15.0%
!! CATTACTAAATATATTTGTT+TGG + tig0026448:18886-18905 None:intergenic 15.0%
!! ACAAATATATTTAGTAATGA+AGG - tig0026448:18887-18906 Msa1429150:intron 15.0%
!!! TTTGAAGAATTTAGAATTTT+AGG + tig0026448:18938-18957 None:intergenic 15.0%
!!! TACCATATTTTGTTTAATAT+TGG - tig0026448:19087-19106 Msa1429150:intron 15.0%
!!! ACCATATTTTGTTTAATATT+GGG - tig0026448:19088-19107 Msa1429150:intron 15.0%
!!! TGAATGTTTTTTTTTTTTGA+AGG - tig0026448:19890-19909 Msa1429150:intron 15.0%
!!! TAAGTTAATATCTATTTTTG+CGG + tig0026448:21173-21192 None:intergenic 15.0%
!! CTACTAAAGTATAAAAATTA+AGG + tig0026448:22147-22166 None:intergenic 15.0%
!! CATAGAATAAATTAAAAACT+TGG + tig0026448:22267-22286 None:intergenic 15.0%
!!! AAAAGTATTTAAGTTTTTAC+TGG + tig0026448:22599-22618 None:intergenic 15.0%
!!! TTTAGCTTTTTTAATATTGT+TGG + tig0026448:23062-23081 None:intergenic 15.0%
!! AAATTAAGGTTAAAAGATAG+AGG + tig0026448:15575-15594 None:intergenic 20.0%
!! GAATAATAATGGCATAAAAT+AGG + tig0026448:16296-16315 None:intergenic 20.0%
!!! TTGTATTTTTCAGATATCAA+AGG - tig0026448:16326-16345 Msa1429150:intron 20.0%
!!! TTTTTTATGTATACACTTCT+AGG - tig0026448:16388-16407 Msa1429150:intron 20.0%
!!! TGTAATTGCTTTTATTATAC+AGG - tig0026448:16497-16516 Msa1429150:intron 20.0%
!!! GATAAAAGAGTATAAATAAG+AGG + tig0026448:17652-17671 None:intergenic 20.0%
!!! GTTATCTGAAATTAAGTTAA+TGG - tig0026448:17971-17990 Msa1429150:intron 20.0%
!!! TTAGAGAATTTTCAAAATGA+TGG - tig0026448:18597-18616 Msa1429150:intron 20.0%
!! AAATTTGGAAATTGAAAGTA+GGG + tig0026448:18795-18814 None:intergenic 20.0%
!!! ATTTCATTGTCATCATTTTT+GGG + tig0026448:18848-18867 None:intergenic 20.0%
!!! AATTTCATTGTCATCATTTT+TGG + tig0026448:18849-18868 None:intergenic 20.0%
!! ACTAAATATATTTGTTTGGA+TGG + tig0026448:18882-18901 None:intergenic 20.0%
!! AAAATATGGTATTACATTTG+TGG + tig0026448:19078-19097 None:intergenic 20.0%
!!! TTGTCTAAAAGTATGAAAAT+TGG + tig0026448:19715-19734 None:intergenic 20.0%
!!! ATTCACTATACATGTTTTTA+AGG - tig0026448:20759-20778 Msa1429150:intron 20.0%
!! AATTTAACATTATCCATTCT+AGG - tig0026448:20802-20821 Msa1429150:intron 20.0%
!! GATATAAAGCTACATAAATA+AGG - tig0026448:20958-20977 Msa1429150:intron 20.0%
!! GGTTAAAAAAAAACAAAATC+AGG - tig0026448:21121-21140 Msa1429150:intron 20.0%
!! CATTGAAATTGATGTAAATA+GGG + tig0026448:21885-21904 None:intergenic 20.0%
!! AAAATTTATCAGAATAGCAT+TGG + tig0026448:22012-22031 None:intergenic 20.0%
!!! AAACTTAAATACTTTTGTGT+TGG - tig0026448:22603-22622 Msa1429150:intron 20.0%
!!! AACTTAAATACTTTTGTGTT+GGG - tig0026448:22604-22623 Msa1429150:intron 20.0%
!! TATAAAGTATAAAGATCAGT+GGG - tig0026448:23138-23157 Msa1429150:CDS 20.0%
!! AAAGGGAAAATAGAAAAAAA+GGG + tig0026448:23269-23288 None:intergenic 20.0%
!! AAAAGGGAAAATAGAAAAAA+AGG + tig0026448:23270-23289 None:intergenic 20.0%
!! AGAAGCAACAAAAAAAATAT+AGG + tig0026448:23320-23339 None:intergenic 20.0%
!! ATTGAATAAATTCTTAATGC+TGG - tig0026448:23454-23473 Msa1429150:CDS 20.0%
!! TTGAATAAATTCTTAATGCT+GGG - tig0026448:23455-23474 Msa1429150:CDS 20.0%
!! AGAAGATAATATCTATACTA+CGG - tig0026448:23772-23791 Msa1429150:intron 20.0%
! GAAACGAAACGAATAAATTA+AGG + tig0026448:15589-15608 None:intergenic 25.0%
! AAAGGAAATCTTGAAGAAAT+GGG + tig0026448:16352-16371 None:intergenic 25.0%
! TAAAGGAAATCTTGAAGAAA+TGG + tig0026448:16353-16372 None:intergenic 25.0%
!! ATTTCCTTTATTTGTATCAC+AGG - tig0026448:16363-16382 Msa1429150:intron 25.0%
! AATACCTGTGATACAAATAA+AGG + tig0026448:16370-16389 None:intergenic 25.0%
! CAGTTCTTAGGAATTTATTA+TGG - tig0026448:16415-16434 Msa1429150:three_prime_UTR 25.0%
!!! ATTGCTTTTATTATACAGGA+TGG - tig0026448:16501-16520 Msa1429150:intron 25.0%
!!! CGAATGAACTTTAAAATTGA+CGG - tig0026448:17066-17085 Msa1429150:three_prime_UTR 25.0%
! TAAGAGATCAAGGATAAATT+GGG + tig0026448:17243-17262 None:intergenic 25.0%
! ATAAGAGATCAAGGATAAAT+TGG + tig0026448:17244-17263 None:intergenic 25.0%
!! AAGAATATATTTTCACACCT+AGG + tig0026448:17300-17319 None:intergenic 25.0%
!!! ACTATTTTGGTCATATATCT+AGG + tig0026448:17399-17418 None:intergenic 25.0%
! TGAGGAATTGATCAAAAATA+TGG - tig0026448:17502-17521 Msa1429150:intron 25.0%
!! AGACTTTTGAATTGAATATG+TGG + tig0026448:17609-17628 None:intergenic 25.0%
!! ATATGATTTGTAAGTTTGGT+AGG + tig0026448:17778-17797 None:intergenic 25.0%
!! ACACATATGATTTGTAAGTT+TGG + tig0026448:17782-17801 None:intergenic 25.0%
! ATATAGATTTGAAGATTGAG+AGG - tig0026448:17844-17863 Msa1429150:intron 25.0%
!!! TCCATTGTTTTTGTTTCTTA+TGG + tig0026448:17870-17889 None:intergenic 25.0%
! TGACTTGAATTATGAATCAA+TGG + tig0026448:18081-18100 None:intergenic 25.0%
! TGAATCTTGAGTTAATTACA+AGG - tig0026448:18273-18292 Msa1429150:intron 25.0%
! CTAAATTATCATCCAAACAA+TGG + tig0026448:18581-18600 None:intergenic 25.0%
! AATTTGGAAATTGAAAGTAG+GGG + tig0026448:18794-18813 None:intergenic 25.0%
! CAAATTTGGAAATTGAAAGT+AGG + tig0026448:18796-18815 None:intergenic 25.0%
! CTACTTTCAATTTCCAAATT+TGG - tig0026448:18794-18813 Msa1429150:intron 25.0%
!!! TAAATTTTTTGGGCCAAATT+TGG + tig0026448:18810-18829 None:intergenic 25.0%
! GCCCAATATTAAACAAAATA+TGG + tig0026448:19092-19111 None:intergenic 25.0%
! CACTCTTTATAAACTCATTT+CGG - tig0026448:19154-19173 Msa1429150:intron 25.0%
! ACTCTTTATAAACTCATTTC+GGG - tig0026448:19155-19174 Msa1429150:intron 25.0%
!!! GCATTATCTCTATTTTTTGT+GGG - tig0026448:19177-19196 Msa1429150:intron 25.0%
!! ATTTTCAATATAGTCTGACT+TGG - tig0026448:19661-19680 Msa1429150:intron 25.0%
! TTAGACAATAGTTTCTCAAT+CGG - tig0026448:19727-19746 Msa1429150:intron 25.0%
! ATTTGTGTGTTTAATGTTCT+TGG - tig0026448:19752-19771 Msa1429150:intron 25.0%
! TCGTAAAACAGTAACATTAA+TGG - tig0026448:19795-19814 Msa1429150:intron 25.0%
! CGTAAAACAGTAACATTAAT+GGG - tig0026448:19796-19815 Msa1429150:intron 25.0%
! GTAAAACAGTAACATTAATG+GGG - tig0026448:19797-19816 Msa1429150:intron 25.0%
! AATTCCAAATTACAGATTGT+TGG + tig0026448:19955-19974 None:intergenic 25.0%
! ATTACTCGTTTAATAGTACT+TGG - tig0026448:19972-19991 Msa1429150:intron 25.0%
! CTTTATCGAGATCAAAATAT+TGG + tig0026448:20213-20232 None:intergenic 25.0%
! TCAAAGTAATCAAAGAAATC+AGG + tig0026448:20667-20686 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG - tig0026448:21246-21265 Msa1429150:intron 25.0%
!!! ATCAACGATAGATTCTTTTT+TGG + tig0026448:21297-21316 None:intergenic 25.0%
!!! CCTAGAGCTATAATTTTTTT+TGG + tig0026448:21547-21566 None:intergenic 25.0%
! CCAAAAAAAATTATAGCTCT+AGG - tig0026448:21544-21563 Msa1429150:intron 25.0%
! GCATTGAAATTGATGTAAAT+AGG + tig0026448:21886-21905 None:intergenic 25.0%
! AAAAATTAAGGATATGCCTT+CGG + tig0026448:22135-22154 None:intergenic 25.0%
! AGATTAAAAGAGAATCACAA+AGG - tig0026448:22407-22426 Msa1429150:intron 25.0%
! CATTACATGATTATATGTGT+AGG - tig0026448:22519-22538 Msa1429150:intron 25.0%
! TATATTTGAACAGTTCTTGT+CGG - tig0026448:22641-22660 Msa1429150:intron 25.0%
! ATGGAAAATACTCATATACT+AGG + tig0026448:22719-22738 None:intergenic 25.0%
!! AAATCGAAGTACTTCTAAAA+GGG + tig0026448:22743-22762 None:intergenic 25.0%
!! AAAATCGAAGTACTTCTAAA+AGG + tig0026448:22744-22763 None:intergenic 25.0%
! AGAATGATGTTATATTACTG+TGG - tig0026448:22882-22901 Msa1429150:intron 25.0%
!!! AAATTTTGTTTTTCCCTTTC+AGG - tig0026448:23015-23034 Msa1429150:intron 25.0%
! ATAACATATTTGTCCTGAAA+GGG + tig0026448:23031-23050 None:intergenic 25.0%
! TATAACATATTTGTCCTGAA+AGG + tig0026448:23032-23051 None:intergenic 25.0%
! GTATAAAGTATAAAGATCAG+TGG - tig0026448:23137-23156 Msa1429150:CDS 25.0%
! AATTTGGTATATTTCAAGAG+TGG - tig0026448:23182-23201 Msa1429150:intron 25.0%
! TTGATCTCTACAAAATACAT+GGG + tig0026448:23629-23648 None:intergenic 25.0%
!!! TTTTTCAGAGTTATACATTG+CGG + tig0026448:23876-23895 None:intergenic 25.0%
! AAGCTAAATGTTATAAAGCT+AGG + tig0026448:23921-23940 None:intergenic 25.0%
!! CGAAATTTTGGTGTGATTTT+CGG - tig0026448:15504-15523 Msa1429150:three_prime_UTR 30.0%
TATGCAAAGCAAAGCAAATA+TGG + tig0026448:15743-15762 None:intergenic 30.0%
TAATCTGATCAATGAGTGAT+CGG + tig0026448:15832-15851 None:intergenic 30.0%
TTTCAGGAAAAGATGTACAA+AGG - tig0026448:16045-16064 Msa1429150:intron 30.0%
AGGAGTAACGTAAAGAAAAT+AGG + tig0026448:16276-16295 None:intergenic 30.0%
AAATTCAGACGTCAAAAGTA+AGG - tig0026448:16527-16546 Msa1429150:intron 30.0%
TGTATTCACCTTACTTTCAA+AGG - tig0026448:16621-16640 Msa1429150:intron 30.0%
! AGTAATAGCCTTTGAAAGTA+AGG + tig0026448:16632-16651 None:intergenic 30.0%
TTAATTAAATGTGCTCGAGT+AGG - tig0026448:16772-16791 Msa1429150:intron 30.0%
TATCTATCAATCTCACTTGA+GGG + tig0026448:16840-16859 None:intergenic 30.0%
! GGGCTTTATAAAGAATATGA+TGG + tig0026448:16965-16984 None:intergenic 30.0%
TATTCTTTATAAAGCCCTTC+AGG - tig0026448:16968-16987 Msa1429150:three_prime_UTR 30.0%
GATTAGATGTTATTCCTGAA+GGG + tig0026448:16985-17004 None:intergenic 30.0%
AATAACATCTAATCCTCTCA+AGG - tig0026448:16991-17010 Msa1429150:three_prime_UTR 30.0%
TCATAAATGCAATACAAGCT+AGG + tig0026448:17097-17116 None:intergenic 30.0%
AGCTTGTATTGCATTTATGA+TGG - tig0026448:17097-17116 Msa1429150:three_prime_UTR 30.0%
GCTTGTATTGCATTTATGAT+GGG - tig0026448:17098-17117 Msa1429150:three_prime_UTR 30.0%
! ATCGACATAATTGTGGATTT+TGG - tig0026448:17150-17169 Msa1429150:three_prime_UTR 30.0%
!! AAGTCTTCTAAGGACTATTT+TGG + tig0026448:17412-17431 None:intergenic 30.0%
AAAATAGTCCTTAGAAGACT+TGG - tig0026448:17411-17430 Msa1429150:intron 30.0%
CTCATATCTCTTAGATTAAG+GGG + tig0026448:17486-17505 None:intergenic 30.0%
CCTCATATCTCTTAGATTAA+GGG + tig0026448:17487-17506 None:intergenic 30.0%
TCCTCATATCTCTTAGATTA+AGG + tig0026448:17488-17507 None:intergenic 30.0%
AATATGTGGAAATACTTGTG+GGG + tig0026448:17595-17614 None:intergenic 30.0%
GAATATGTGGAAATACTTGT+GGG + tig0026448:17596-17615 None:intergenic 30.0%
TGAATATGTGGAAATACTTG+TGG + tig0026448:17597-17616 None:intergenic 30.0%
GCCATAAGAAACAAAAACAA+TGG - tig0026448:17866-17885 Msa1429150:intron 30.0%
ATAAAAGGCAATTACACTCA+TGG + tig0026448:17998-18017 None:intergenic 30.0%
TTATGAATCAATGGCATATC+AGG + tig0026448:18072-18091 None:intergenic 30.0%
GTTCTCTCAAATCTAATAGT+GGG + tig0026448:18216-18235 None:intergenic 30.0%
AGTTCTCTCAAATCTAATAG+TGG + tig0026448:18217-18236 None:intergenic 30.0%
TGTAAGTGAATTCCATTGTT+TGG - tig0026448:18566-18585 Msa1429150:intron 30.0%
!! GCAAAATTTTGGAAAATGTG+AGG + tig0026448:18732-18751 None:intergenic 30.0%
GAGTTAGTATCATTAGAATC+AGG - tig0026448:19030-19049 Msa1429150:intron 30.0%
!!! GGCATTATCTCTATTTTTTG+TGG - tig0026448:19176-19195 Msa1429150:intron 30.0%
TTCCATATTCAAGTAGAACT+CGG - tig0026448:19340-19359 Msa1429150:intron 30.0%
ATGTTACAGTAAAATGTGCA+AGG - tig0026448:19478-19497 Msa1429150:intron 30.0%
ATGTTACACTAAAACGTGTA+AGG - tig0026448:19607-19626 Msa1429150:intron 30.0%
ATGCAAAAATTGTTCAACAG+TGG + tig0026448:19690-19709 None:intergenic 30.0%
! TGTTACTGTTTTACGAAGAT+TGG + tig0026448:19791-19810 None:intergenic 30.0%
ATACATATGTGAACACAAGT+TGG + tig0026448:19828-19847 None:intergenic 30.0%
!!! GAAATAGCATTGTGTCATTT+TGG + tig0026448:19870-19889 None:intergenic 30.0%
GTTTAATAGTACTTGGATTG+AGG - tig0026448:19979-19998 Msa1429150:intron 30.0%
GATGAGTAATTCAAATTCAG+TGG - tig0026448:20018-20037 Msa1429150:intron 30.0%
!!! CCTAAAATCTAGTTTTCAAG+GGG + tig0026448:20136-20155 None:intergenic 30.0%
!!! GCCTAAAATCTAGTTTTCAA+GGG + tig0026448:20137-20156 None:intergenic 30.0%
TTTCAATAATCTGTGATGCA+TGG - tig0026448:20242-20261 Msa1429150:intron 30.0%
TTTCAAATAGAGGACACAAA+GGG + tig0026448:20426-20445 None:intergenic 30.0%
! TTTTCAAATAGAGGACACAA+AGG + tig0026448:20427-20446 None:intergenic 30.0%
!!! AGGAGTATCTTTTCAAATAG+AGG + tig0026448:20436-20455 None:intergenic 30.0%
! GGGTTAATTAATACCTTTTC+AGG - tig0026448:20462-20481 Msa1429150:intron 30.0%
CTATCACTGCTGAAAATATA+TGG - tig0026448:20593-20612 Msa1429150:intron 30.0%
!! CTTTGATTACTTTGAAGCTA+TGG - tig0026448:20672-20691 Msa1429150:intron 30.0%
GTAATAGAATCTATCGTTGA+TGG - tig0026448:21195-21214 Msa1429150:intron 30.0%
GCATAAAAATATGCAAGGTT+CGG - tig0026448:21251-21270 Msa1429150:intron 30.0%
CATAAAAATATGCAAGGTTC+GGG - tig0026448:21252-21271 Msa1429150:intron 30.0%
ATAAAAATATGCAAGGTTCG+GGG - tig0026448:21253-21272 Msa1429150:intron 30.0%
!!! GATAGATTCTTTTTTGGTAG+TGG + tig0026448:21291-21310 None:intergenic 30.0%
TTAGTGGAAAAGACTTATGT+GGG + tig0026448:21570-21589 None:intergenic 30.0%
!! GTAATATTAGTTTGCATGAC+AGG - tig0026448:21803-21822 Msa1429150:intron 30.0%
CCACACATTGTAATATTTAG+GGG + tig0026448:21981-22000 None:intergenic 30.0%
CCCACACATTGTAATATTTA+GGG + tig0026448:21982-22001 None:intergenic 30.0%
CCCTAAATATTACAATGTGT+GGG - tig0026448:21979-21998 Msa1429150:intron 30.0%
ACCCACACATTGTAATATTT+AGG + tig0026448:21983-22002 None:intergenic 30.0%
TGTTTGCGACATTTGTTTAT+GGG - tig0026448:22180-22199 Msa1429150:intron 30.0%
TTATATGTTCTGCATACTTC+GGG + tig0026448:22449-22468 None:intergenic 30.0%
GTTATATGTTCTGCATACTT+CGG + tig0026448:22450-22469 None:intergenic 30.0%
GTATGCAGAACATATAACTT+TGG - tig0026448:22452-22471 Msa1429150:intron 30.0%
!!! AGAAGTACTTCGATTTTTAC+AGG - tig0026448:22747-22766 Msa1429150:intron 30.0%
!! GAAGTACTTCGATTTTTACA+GGG - tig0026448:22748-22767 Msa1429150:intron 30.0%
! TATTACTGTGGATTGAATGA+AGG - tig0026448:22894-22913 Msa1429150:intron 30.0%
GAAAACATTGCTCAACAATT+TGG - tig0026448:23166-23185 Msa1429150:CDS 30.0%
CTTGATCTCTACAAAATACA+TGG + tig0026448:23630-23649 None:intergenic 30.0%
TTGATCTCTACAAGATACAT+GGG + tig0026448:23697-23716 None:intergenic 30.0%
TTTGATCTCTACAAGATACA+TGG + tig0026448:23698-23717 None:intergenic 30.0%
! GAGATCAAAATTTTGTCTTG+TGG - tig0026448:23709-23728 Msa1429150:intron 30.0%
TATCTATACTACGGATAGAA+AGG - tig0026448:23781-23800 Msa1429150:intron 30.0%
AAGAAATGCACATCGAATAA+AGG + tig0026448:23828-23847 None:intergenic 30.0%
! TTTGGGAAATGGCGAAATTT+TGG - tig0026448:15492-15511 Msa1429150:three_prime_UTR 35.0%
TTCTCGACTTACAACAAGAA+AGG - tig0026448:15870-15889 Msa1429150:three_prime_UTR 35.0%
CTTGAACAAGAGACTTGATT+TGG + tig0026448:15919-15938 None:intergenic 35.0%
! TTCTCCATCCTCAACTTTTT+AGG - tig0026448:16158-16177 Msa1429150:intron 35.0%
GGCTATTACTTGTCTTCTTA+TGG - tig0026448:16642-16661 Msa1429150:intron 35.0%
TAAACAGTAGAGTAGTGTAG+AGG - tig0026448:16745-16764 Msa1429150:intron 35.0%
!! AGGACTTGTTGTTTAGTTGT+AGG - tig0026448:16792-16811 Msa1429150:intron 35.0%
GTATCTATCAATCTCACTTG+AGG + tig0026448:16841-16860 None:intergenic 35.0%
TCTTCTTCAGCCATGTAAAA+CGG - tig0026448:16926-16945 Msa1429150:three_prime_UTR 35.0%
!! CAAATTCAAGCCGTTTTACA+TGG + tig0026448:16939-16958 None:intergenic 35.0%
GGATTAGATGTTATTCCTGA+AGG + tig0026448:16986-17005 None:intergenic 35.0%
AAAACATGTTTCACCTTGAG+AGG + tig0026448:17007-17026 None:intergenic 35.0%
CATTCGTCGTGTAAAAACAT+TGG + tig0026448:17052-17071 None:intergenic 35.0%
! GTATTGCATTTATGATGGGA+AGG - tig0026448:17102-17121 Msa1429150:three_prime_UTR 35.0%
!! TTTGAGCATCGACATAATTG+TGG - tig0026448:17143-17162 Msa1429150:three_prime_UTR 35.0%
AAAATCCAGCTAAAGAGGTT+TGG + tig0026448:17211-17230 None:intergenic 35.0%
! AAACCTCTTTAGCTGGATTT+TGG - tig0026448:17210-17229 Msa1429150:exon 35.0%
! AACCTCTTTAGCTGGATTTT+GGG - tig0026448:17211-17230 Msa1429150:exon 35.0%
AAATGCGTGATAAGAGATCA+AGG + tig0026448:17253-17272 None:intergenic 35.0%
! TATATTTTCACACCTAGGAC+TGG + tig0026448:17295-17314 None:intergenic 35.0%
AAAAGCTAGCTCAAAAGGTA+AGG + tig0026448:17442-17461 None:intergenic 35.0%
CACTAAAAAGCTAGCTCAAA+AGG + tig0026448:17447-17466 None:intergenic 35.0%
CCCTTAATCTAAGAGATATG+AGG - tig0026448:17484-17503 Msa1429150:intron 35.0%
ATATGTGGAAATACTTGTGG+GGG + tig0026448:17594-17613 None:intergenic 35.0%
GAGGAAAGAAAGAGTAGTAA+GGG + tig0026448:17633-17652 None:intergenic 35.0%
AGAGGAAAGAAAGAGTAGTA+AGG + tig0026448:17634-17653 None:intergenic 35.0%
TTATCCTAGACTCTCTATCA+AGG - tig0026448:17667-17686 Msa1429150:intron 35.0%
! TAATTGCATTTTTGCCCTTC+TGG + tig0026448:17928-17947 None:intergenic 35.0%
CACGAAATGGAGAATCAAAT+GGG + tig0026448:18110-18129 None:intergenic 35.0%
GATGTAACCAACTCAAATGT+TGG + tig0026448:18353-18372 None:intergenic 35.0%
!! ACATTTGAGTTGGTTACATC+TGG - tig0026448:18353-18372 Msa1429150:intron 35.0%
! TATTCTCTTAAGAGCGTGTT+TGG - tig0026448:18511-18530 Msa1429150:CDS 35.0%
! TTGGATGTAGGAATGTTTTG+AGG - tig0026448:18530-18549 Msa1429150:intron 35.0%
!! TGGATGTAGGAATGTTTTGA+GGG - tig0026448:18531-18550 Msa1429150:intron 35.0%
! GGGGTCAATTTGCAAAATTT+TGG + tig0026448:18743-18762 None:intergenic 35.0%
!! ATTTAGCTTTAGAGCGTGTT+TGG + tig0026448:18979-18998 None:intergenic 35.0%
ATCATTAGAATCAGGCATAC+TGG - tig0026448:19038-19057 Msa1429150:intron 35.0%
!!! TCTCTATTTTTTGTGGGACT+TGG - tig0026448:19183-19202 Msa1429150:intron 35.0%
!!! CTCTATTTTTTGTGGGACTT+GGG - tig0026448:19184-19203 Msa1429150:intron 35.0%
TGGTGTGTGGATATAAATAG+TGG - tig0026448:19246-19265 Msa1429150:intron 35.0%
!! AAATAGTGGATGACCCTAAA+TGG - tig0026448:19260-19279 Msa1429150:intron 35.0%
!! GAACCTCTAAGATCCATTTA+GGG + tig0026448:19276-19295 None:intergenic 35.0%
!! TGAACCTCTAAGATCCATTT+AGG + tig0026448:19277-19296 None:intergenic 35.0%
! AGTCTTGTATCCCTAGAAAT+CGG - tig0026448:19363-19382 Msa1429150:intron 35.0%
AGCACCAACAATCTGTAATT+TGG - tig0026448:19948-19967 Msa1429150:intron 35.0%
ATTCAAATTCAGTGGCATAG+TGG - tig0026448:20026-20045 Msa1429150:intron 35.0%
! GTCAAGTAGTATGGGATTTT+TGG - tig0026448:20084-20103 Msa1429150:intron 35.0%
!! AAGTAGTATGGGATTTTTGG+TGG - tig0026448:20087-20106 Msa1429150:intron 35.0%
! CCCCTTGAAAACTAGATTTT+AGG - tig0026448:20133-20152 Msa1429150:intron 35.0%
!!! CGCCTAAAATCTAGTTTTCA+AGG + tig0026448:20138-20157 None:intergenic 35.0%
! TGAAAACTAGATTTTAGGCG+AGG - tig0026448:20138-20157 Msa1429150:intron 35.0%
! GAAAACTAGATTTTAGGCGA+GGG - tig0026448:20139-20158 Msa1429150:intron 35.0%
TAGTAAGCAATTAACTCTCC+TGG + tig0026448:20370-20389 None:intergenic 35.0%
TTGAAAAGATACTCCTCAAG+AGG - tig0026448:20440-20459 Msa1429150:intron 35.0%
TGAAAAGATACTCCTCAAGA+GGG - tig0026448:20441-20460 Msa1429150:intron 35.0%
GTATTAATTAACCCCTCTTG+AGG + tig0026448:20456-20475 None:intergenic 35.0%
!!! CTTTTCAGGTCATTACAAGT+GGG - tig0026448:20476-20495 Msa1429150:intron 35.0%
ATCATTCTCGAAGGTGAAAT+GGG - tig0026448:20540-20559 Msa1429150:intron 35.0%
! ATTTTCAGCAGTGATAGAAG+AGG + tig0026448:20590-20609 None:intergenic 35.0%
ACACATACTTATCCTTGTCA+AGG + tig0026448:20705-20724 None:intergenic 35.0%
AGGATAAGTATGTGTTCAAG+AGG - tig0026448:20710-20729 Msa1429150:intron 35.0%
ATAAGTATGTGTTCAAGAGG+AGG - tig0026448:20713-20732 Msa1429150:intron 35.0%
TAAGTATGTGTTCAAGAGGA+GGG - tig0026448:20714-20733 Msa1429150:intron 35.0%
TATCCATTCTAGGTCCATTA+TGG - tig0026448:20812-20831 Msa1429150:intron 35.0%
GTTTCGTCATGGAATGATAA+TGG - tig0026448:20837-20856 Msa1429150:intron 35.0%
ATGATCCATGTAAGTTCAGT+CGG - tig0026448:20877-20896 Msa1429150:intron 35.0%
! ATAACTTGTGATCGCCAAAT+TGG - tig0026448:20911-20930 Msa1429150:intron 35.0%
TTGCATATCCCTAACCAATT+TGG + tig0026448:20928-20947 None:intergenic 35.0%
TTAAGAGTTGTATCTGCGTT+CGG + tig0026448:21028-21047 None:intergenic 35.0%
ACGCAGATACAACTCTTAAA+TGG - tig0026448:21029-21048 Msa1429150:intron 35.0%
!!! ATTCTTTTTTGGTAGTGGCT+GGG + tig0026448:21286-21305 None:intergenic 35.0%
GTTTGTAAGAACCTACTCAA+GGG - tig0026448:21401-21420 Msa1429150:intron 35.0%
! TTACAATTTTGCCCTTGAGT+AGG + tig0026448:21415-21434 None:intergenic 35.0%
GTTAGTGGAAAAGACTTATG+TGG + tig0026448:21571-21590 None:intergenic 35.0%
TTATGTTGAAGGAGAAGACT+AGG + tig0026448:21604-21623 None:intergenic 35.0%
CATTTACCTTGAGACTACTT+AGG + tig0026448:21935-21954 None:intergenic 35.0%
CCCCTAAATATTACAATGTG+TGG - tig0026448:21978-21997 Msa1429150:intron 35.0%
GTCGCAAACACAAACAATAA+TGG + tig0026448:22170-22189 None:intergenic 35.0%
GTGTTTGCGACATTTGTTTA+TGG - tig0026448:22179-22198 Msa1429150:intron 35.0%
GTTTGCGACATTTGTTTATG+GGG - tig0026448:22181-22200 Msa1429150:intron 35.0%
AATTCCAGTTTAGGAACTGT+TGG - tig0026448:22207-22226 Msa1429150:intron 35.0%
TACTCCTTCATGGTATATAG+TGG + tig0026448:22235-22254 None:intergenic 35.0%
TTTGACAAAACTTCACCTAC+TGG - tig0026448:22372-22391 Msa1429150:intron 35.0%
TTGACAAAACTTCACCTACT+GGG - tig0026448:22373-22392 Msa1429150:intron 35.0%
TATATGTGTAGGAACTTCAC+AGG - tig0026448:22530-22549 Msa1429150:intron 35.0%
!! ATTTTTACAGGGCTCTAGTT+TGG - tig0026448:22759-22778 Msa1429150:intron 35.0%
!! TTTTTACAGGGCTCTAGTTT+GGG - tig0026448:22760-22779 Msa1429150:intron 35.0%
ATAAAGCATGTATAGCTACC+TGG + tig0026448:22831-22850 None:intergenic 35.0%
! AATGGACTTGAGCTATTTGT+TGG - tig0026448:22930-22949 Msa1429150:intron 35.0%
TGTGTAACAAAATGATGCTG+TGG - tig0026448:22987-23006 Msa1429150:CDS 35.0%
AAAAAAGCTAAACCTGTCTC+TGG - tig0026448:23070-23089 Msa1429150:intron 35.0%
TGGTATATTTCAAGAGTGGA+AGG - tig0026448:23186-23205 Msa1429150:intron 35.0%
TAGTTTACTCGTCAACTAGA+TGG + tig0026448:23243-23262 None:intergenic 35.0%
TCTACACACGAGAAGAAAAA+GGG + tig0026448:23286-23305 None:intergenic 35.0%
ATCTACACACGAGAAGAAAA+AGG + tig0026448:23287-23306 None:intergenic 35.0%
GAAGTAGCTTCAAAGATTCT+GGG + tig0026448:23432-23451 None:intergenic 35.0%
TGAAGTAGCTTCAAAGATTC+TGG + tig0026448:23433-23452 None:intergenic 35.0%
CTGAAAACAACAACTCTCTT+GGG + tig0026448:23502-23521 None:intergenic 35.0%
TCTGAAAACAACAACTCTCT+TGG + tig0026448:23503-23522 None:intergenic 35.0%
ACATCATAGTCTCTTAAGCT+CGG + tig0026448:23551-23570 None:intergenic 35.0%
! TATGATGTGGTTGAAAGTGT+AGG - tig0026448:23563-23582 Msa1429150:intron 35.0%
TCTCTACAAAATACATGGGA+TGG + tig0026448:23625-23644 None:intergenic 35.0%
! GAGATCAAGATTTTGTCTTG+TGG - tig0026448:23641-23660 Msa1429150:intron 35.0%
AGATATTATCTTCTACCCCA+AGG + tig0026448:23766-23785 None:intergenic 35.0%
! TTTGGTGGTTACGAAGAAGA+AGG - tig0026448:15433-15452 Msa1429150:three_prime_UTR 40.0%
AACGAAACGAAACGAAACGA+AGG + tig0026448:15633-15652 None:intergenic 40.0%
TTGCGAAAAGTCTCATCTGA+AGG + tig0026448:15657-15676 None:intergenic 40.0%
AATTACATACAGCAACAGCG+AGG + tig0026448:15702-15721 None:intergenic 40.0%
!! GATCAGATTAGCTTGCAACA+AGG - tig0026448:15842-15861 Msa1429150:three_prime_UTR 40.0%
AAGGCTGATTGATAAAGTCC+AGG - tig0026448:16064-16083 Msa1429150:intron 40.0%
GGAACCTAAAAAGTTGAGGA+TGG + tig0026448:16165-16184 None:intergenic 40.0%
CACTGGAACCTAAAAAGTTG+AGG + tig0026448:16169-16188 None:intergenic 40.0%
!!! CTCAACTTTTTAGGTTCCAG+TGG - tig0026448:16167-16186 Msa1429150:three_prime_UTR 40.0%
!! ATGTAATCGTGCTGATTACC+TGG - tig0026448:16209-16228 Msa1429150:three_prime_UTR 40.0%
! ACAAAAGCTTGTGCTGGTAA+AGG + tig0026448:16710-16729 None:intergenic 40.0%
CTTTCAACAAAAGCTTGTGC+TGG + tig0026448:16716-16735 None:intergenic 40.0%
GTAGGACACAATAATACCGT+TGG - tig0026448:16810-16829 Msa1429150:intron 40.0%
AACATCCAAACCTCTTTAGC+TGG - tig0026448:17203-17222 Msa1429150:exon 40.0%
AAGACTAAACATCAGGAGAG+TGG + tig0026448:17343-17362 None:intergenic 40.0%
ACTCTCCTGATGTTTAGTCT+TGG - tig0026448:17342-17361 Msa1429150:intron 40.0%
! CTCTCCTGATGTTTAGTCTT+GGG - tig0026448:17343-17362 Msa1429150:intron 40.0%
AGGATTGTCCAAGTCTTCTA+AGG + tig0026448:17422-17441 None:intergenic 40.0%
!! TAGCTTTTTAGTGCCGAGTT+AGG - tig0026448:17454-17473 Msa1429150:intron 40.0%
TAAGGGGTTTATGCCTAACT+CGG + tig0026448:17470-17489 None:intergenic 40.0%
CAGGTTCTCATGTATAACGT+GGG + tig0026448:17567-17586 None:intergenic 40.0%
ACTACCTTGATAGAGAGTCT+AGG + tig0026448:17674-17693 None:intergenic 40.0%
GGGTTACAAGATCGTGAATA+GGG - tig0026448:17728-17747 Msa1429150:intron 40.0%
GGTTACAAGATCGTGAATAG+GGG - tig0026448:17729-17748 Msa1429150:intron 40.0%
GTTACAAGATCGTGAATAGG+GGG - tig0026448:17730-17749 Msa1429150:intron 40.0%
! CTGGTTCATTTGCTAGCATA+TGG + tig0026448:17909-17928 None:intergenic 40.0%
ATGCTAGCAAATGAACCAGA+AGG - tig0026448:17910-17929 Msa1429150:intron 40.0%
TGCTAGCAAATGAACCAGAA+GGG - tig0026448:17911-17930 Msa1429150:intron 40.0%
GCACGAAATGGAGAATCAAA+TGG + tig0026448:18111-18130 None:intergenic 40.0%
ACCTACACCAACATTTGAGT+TGG - tig0026448:18343-18362 Msa1429150:intron 40.0%
ACCAACTCAAATGTTGGTGT+AGG + tig0026448:18347-18366 None:intergenic 40.0%
TTGCAAGCTATCCTAACAAC+TGG - tig0026448:18440-18459 Msa1429150:intron 40.0%
TAGTGTTTGTGCCAGTTGTT+AGG + tig0026448:18454-18473 None:intergenic 40.0%
! TTAAGAGCGTGTTTGGATGT+AGG - tig0026448:18518-18537 Msa1429150:CDS 40.0%
!! ACACGCTCTAAAGCTAAATC+TGG - tig0026448:18980-18999 Msa1429150:CDS 40.0%
! ACATTTGTGGATTACTCTCC+AGG + tig0026448:19065-19084 None:intergenic 40.0%
CGGTTTAGTAAGGATGAGTT+AGG + tig0026448:19114-19133 None:intergenic 40.0%
! CCTTACAAGTCGGTTTAGTA+AGG + tig0026448:19124-19143 None:intergenic 40.0%
!! CCTTACTAAACCGACTTGTA+AGG - tig0026448:19121-19140 Msa1429150:intron 40.0%
TGACCCTAAATGGATCTTAG+AGG - tig0026448:19270-19289 Msa1429150:intron 40.0%
CTCCGAGTTCTACTTGAATA+TGG + tig0026448:19345-19364 None:intergenic 40.0%
GTCTTGTATCCCTAGAAATC+GGG - tig0026448:19364-19383 Msa1429150:intron 40.0%
TCTTGTATCCCTAGAAATCG+GGG - tig0026448:19365-19384 Msa1429150:intron 40.0%
AGATTTCACCCCGATTTCTA+GGG + tig0026448:19376-19395 None:intergenic 40.0%
AAGATTTCACCCCGATTTCT+AGG + tig0026448:19377-19396 None:intergenic 40.0%
CTGTAACATGTCGAAGCTAA+AGG + tig0026448:19467-19486 None:intergenic 40.0%
AAATTCAGTGGCATAGTGGT+AGG - tig0026448:20030-20049 Msa1429150:intron 40.0%
AATTCAGTGGCATAGTGGTA+GGG - tig0026448:20031-20050 Msa1429150:intron 40.0%
AATCCCATACTACTTGACGT+GGG + tig0026448:20082-20101 None:intergenic 40.0%
AAATCCCATACTACTTGACG+TGG + tig0026448:20083-20102 None:intergenic 40.0%
GGTGGAATACTTAAGAGACT+TGG - tig0026448:20105-20124 Msa1429150:intron 40.0%
CGAGGGTTTCACAAATTCTT+GGG - tig0026448:20156-20175 Msa1429150:intron 40.0%
TCTGTGATGCATGGTGAATA+AGG - tig0026448:20251-20270 Msa1429150:intron 40.0%
GAAAAGATACTCCTCAAGAG+GGG - tig0026448:20442-20461 Msa1429150:intron 40.0%
CCACTTGTAATGACCTGAAA+AGG + tig0026448:20478-20497 None:intergenic 40.0%
!!! CCTTTTCAGGTCATTACAAG+TGG - tig0026448:20475-20494 Msa1429150:intron 40.0%
AACAGAGTCATCATTCTCGA+AGG - tig0026448:20531-20550 Msa1429150:intron 40.0%
CATCATTCTCGAAGGTGAAA+TGG - tig0026448:20539-20558 Msa1429150:intron 40.0%
! TGTCATCTGAGGTTGGATAA+AGG + tig0026448:20633-20652 None:intergenic 40.0%
TTATCCAACCTCAGATGACA+TGG - tig0026448:20633-20652 Msa1429150:intron 40.0%
! ATTTCCATGTCATCTGAGGT+TGG + tig0026448:20640-20659 None:intergenic 40.0%
!! TGCTATTTCCATGTCATCTG+AGG + tig0026448:20644-20663 None:intergenic 40.0%
AACAACCGACTGAACTTACA+TGG + tig0026448:20885-20904 None:intergenic 40.0%
TTGTGATCGCCAAATTGGTT+AGG - tig0026448:20916-20935 Msa1429150:intron 40.0%
TGTGATCGCCAAATTGGTTA+GGG - tig0026448:20917-20936 Msa1429150:intron 40.0%
GGTTAGGGATATGCAAGTTA+TGG - tig0026448:20932-20951 Msa1429150:intron 40.0%
!!! TTCTTTTTTGGTAGTGGCTG+GGG + tig0026448:21285-21304 None:intergenic 40.0%
!!! GATTCTTTTTTGGTAGTGGC+TGG + tig0026448:21287-21306 None:intergenic 40.0%
! GTTTACGATGCTGACTACAT+TGG + tig0026448:21364-21383 None:intergenic 40.0%
TAAACACGAGGAACGTAACA+CGG - tig0026448:21379-21398 Msa1429150:intron 40.0%
GGTTTGTAAGAACCTACTCA+AGG - tig0026448:21400-21419 Msa1429150:intron 40.0%
CTAGGTCTAGGTTAAGTTAG+TGG + tig0026448:21586-21605 None:intergenic 40.0%
!! TTGTTTGTTGTTTCCTGCTG+CGG + tig0026448:21657-21676 None:intergenic 40.0%
CAACAAACAAGCAGATCTTG+TGG - tig0026448:21667-21686 Msa1429150:intron 40.0%
AAACAAGCAGATCTTGTGGT+GGG - tig0026448:21671-21690 Msa1429150:intron 40.0%
CTGATTGTGTTCAGTTCAGT+TGG - tig0026448:21730-21749 Msa1429150:intron 40.0%
GGGATGAACTATCACCAAAA+TGG - tig0026448:22109-22128 Msa1429150:intron 40.0%
ATGGGGAAGAATTCCAGTTT+AGG - tig0026448:22198-22217 Msa1429150:intron 40.0%
GGTACCACTATATACCATGA+AGG - tig0026448:22228-22247 Msa1429150:intron 40.0%
GAATGCTTAGTACTCCTTCA+TGG + tig0026448:22245-22264 None:intergenic 40.0%
AACAGTTCTTGTCGGTACAA+AGG - tig0026448:22649-22668 Msa1429150:intron 40.0%
! GAAGTACTTCTAAAAGGGCA+TGG + tig0026448:22738-22757 None:intergenic 40.0%
TGGACTTCATTCAGCTTGAT+TGG + tig0026448:22811-22830 None:intergenic 40.0%
AATCAAGCTGAATGAAGTCC+AGG - tig0026448:22810-22829 Msa1429150:CDS 40.0%
ACTCCTTTATAAGCTGTCCT+AGG + tig0026448:23364-23383 None:intergenic 40.0%
AACAAGGAATATACGCTTCG+TGG + tig0026448:23407-23426 None:intergenic 40.0%
ACGAAGCGTATATTCCTTGT+TGG - tig0026448:23406-23425 Msa1429150:intron 40.0%
GAGCTTAAGAGACTATGATG+TGG - tig0026448:23550-23569 Msa1429150:CDS 40.0%
! TGTGGTTGAAAGTGTAGGTA+CGG - tig0026448:23568-23587 Msa1429150:intron 40.0%
! TTTTGTCTTGTGGAGTAGTG+TGG - tig0026448:23651-23670 Msa1429150:intron 40.0%
TCTCTACAAGATACATGGGA+TGG + tig0026448:23693-23712 None:intergenic 40.0%
GATACTGTGATCATAGAGTG+TGG - tig0026448:23740-23759 Msa1429150:intron 40.0%
! AGACGACTGAGCGAGTTTTT+GGG - tig0026448:15475-15494 Msa1429150:three_prime_UTR 45.0%
!! CTGAGCGAGTTTTTGGGAAA+TGG - tig0026448:15481-15500 Msa1429150:three_prime_UTR 45.0%
TCTTCTCTTTGTTGCAGCCT+TGG - tig0026448:15529-15548 Msa1429150:three_prime_UTR 45.0%
CTGGATGTAGATGAACACCA+AGG + tig0026448:15549-15568 None:intergenic 45.0%
!! CTTGGTGTTCATCTACATCC+AGG - tig0026448:15547-15566 Msa1429150:three_prime_UTR 45.0%
!! GGTTAAAAGATAGAGGCACC+TGG + tig0026448:15568-15587 None:intergenic 45.0%
! CAGAATTGATAGTCCTCTCC+AGG + tig0026448:16230-16249 None:intergenic 45.0%
CTTCTAGGTGTGCAGTTCTT+AGG - tig0026448:16403-16422 Msa1429150:intron 45.0%
CGATGAGCTATCTCATATGC+AGG - tig0026448:16560-16579 Msa1429150:three_prime_UTR 45.0%
! AAAGCTTGTGCTGGTAAAGG+TGG + tig0026448:16707-16726 None:intergenic 45.0%
!! AGAAGCGTTACTCCTTGCTA+AGG + tig0026448:16909-16928 None:intergenic 45.0%
!! ATGGGAAGGTGTTTGCCTTA+GGG - tig0026448:17116-17135 Msa1429150:three_prime_UTR 45.0%
CCCTACATCAGCTAGAGATA+CGG + tig0026448:17176-17195 None:intergenic 45.0%
CCGTATCTCTAGCTGATGTA+GGG - tig0026448:17173-17192 Msa1429150:three_prime_UTR 45.0%
GTCCCAAAATCCAGCTAAAG+AGG + tig0026448:17216-17235 None:intergenic 45.0%
! AGGACTGGACATCTAAAGCA+TGG + tig0026448:17280-17299 None:intergenic 45.0%
! TGCTTTAGATGTCCAGTCCT+AGG - tig0026448:17280-17299 Msa1429150:CDS 45.0%
ATCAGGAGAGTGGACAAATG+TGG + tig0026448:17333-17352 None:intergenic 45.0%
CACACCCAAGACTAAACATC+AGG + tig0026448:17350-17369 None:intergenic 45.0%
!! TGTTTAGTCTTGGGTGTGAG+AGG - tig0026448:17352-17371 Msa1429150:intron 45.0%
!! GTTTAGTCTTGGGTGTGAGA+GGG - tig0026448:17353-17372 Msa1429150:intron 45.0%
CCAGGTTCTCATGTATAACG+TGG + tig0026448:17568-17587 None:intergenic 45.0%
CCACGTTATACATGAGAACC+TGG - tig0026448:17565-17584 Msa1429150:intron 45.0%
GGGGTTACAAGATCGTGAAT+AGG - tig0026448:17727-17746 Msa1429150:intron 45.0%
! CAAAAGACGAGAGCACGAAA+TGG + tig0026448:18123-18142 None:intergenic 45.0%
GCAACTGTTCTGTCACTGAT+TGG - tig0026448:18165-18184 Msa1429150:intron 45.0%
!! TAATAGTGGGCACTGATCAG+AGG + tig0026448:18203-18222 None:intergenic 45.0%
ATCAGCTACATGTAGCTGAC+TGG + tig0026448:18299-18318 None:intergenic 45.0%
GCTTGTAGTAGAAGATCGCA+TGG + tig0026448:18409-18428 None:intergenic 45.0%
!! CTTTAGAGCGTGTTTGGATG+AGG + tig0026448:18973-18992 None:intergenic 45.0%
!! CTAAACCGACTTGTAAGGTG+AGG - tig0026448:19126-19145 Msa1429150:intron 45.0%
AGACTCCTCACCTTACAAGT+CGG + tig0026448:19134-19153 None:intergenic 45.0%
ATTCAGTGGCATAGTGGTAG+GGG - tig0026448:20032-20051 Msa1429150:intron 45.0%
TACTACTTGACGTGGGACTT+GGG + tig0026448:20075-20094 None:intergenic 45.0%
ATACTACTTGACGTGGGACT+TGG + tig0026448:20076-20095 None:intergenic 45.0%
AAGTCCCACGTCAAGTAGTA+TGG - tig0026448:20075-20094 Msa1429150:intron 45.0%
AGTCCCACGTCAAGTAGTAT+GGG - tig0026448:20076-20095 Msa1429150:intron 45.0%
GCGAGGGTTTCACAAATTCT+TGG - tig0026448:20155-20174 Msa1429150:intron 45.0%
! GCAGCACTTAGATTTTGAGC+CGG - tig0026448:20330-20349 Msa1429150:intron 45.0%
! TTGAGCCGGTTCAAACTGAA+AGG - tig0026448:20344-20363 Msa1429150:intron 45.0%
TATGGCAACTCTCCTTGACA+AGG - tig0026448:20690-20709 Msa1429150:intron 45.0%
!! CAGCCATAATGGACCTAGAA+TGG + tig0026448:20818-20837 None:intergenic 45.0%
CCATGACGAAACAGCCATAA+TGG + tig0026448:20829-20848 None:intergenic 45.0%
! CCATTATGGCTGTTTCGTCA+TGG - tig0026448:20826-20845 Msa1429150:intron 45.0%
!! ATCAGGGTAAAGAGTGTCAC+AGG + tig0026448:21082-21101 None:intergenic 45.0%
TAGTCAGCATCGTAAACACG+AGG - tig0026448:21367-21386 Msa1429150:intron 45.0%
TGAAGGAGAAGACTAGGTCT+AGG + tig0026448:21598-21617 None:intergenic 45.0%
GTTGCTTAAAGTTGCAGAGG+CGG + tig0026448:21631-21650 None:intergenic 45.0%
CTGGTTGCTTAAAGTTGCAG+AGG + tig0026448:21634-21653 None:intergenic 45.0%
CAAACAAGCAGATCTTGTGG+TGG - tig0026448:21670-21689 Msa1429150:intron 45.0%
AACAAGCAGATCTTGTGGTG+GGG - tig0026448:21672-21691 Msa1429150:intron 45.0%
CAGTGTTTGTGCCAACTGTT+AGG - tig0026448:21754-21773 Msa1429150:intron 45.0%
! TCACAAGCTAGCCTAACAGT+TGG + tig0026448:21768-21787 None:intergenic 45.0%
ACGCAACCTAAGTAGTCTCA+AGG - tig0026448:21926-21945 Msa1429150:intron 45.0%
TGCAGACGAACTTTATCGCT+CGG - tig0026448:22044-22063 Msa1429150:intron 45.0%
! ACTTCTTTCCTGGACTAGGA+TGG - tig0026448:22067-22086 Msa1429150:intron 45.0%
! GATGCTGGCTAGATCTACAT+GGG - tig0026448:22089-22108 Msa1429150:intron 45.0%
ACTATCACCAAAATGGCCGA+AGG - tig0026448:22116-22135 Msa1429150:intron 45.0%
GGTACCAACAGTTCCTAAAC+TGG + tig0026448:22214-22233 None:intergenic 45.0%
ATGTTCTGCATACTTCGGGT+CGG + tig0026448:22445-22464 None:intergenic 45.0%
TGGATTGAATGAAGGTCGAC+TGG - tig0026448:22902-22921 Msa1429150:intron 45.0%
! GGACTTGAGCTATTTGTTGG+AGG - tig0026448:22933-22952 Msa1429150:intron 45.0%
! GCTATTTGTTGGAGGTGAGA+TGG - tig0026448:22941-22960 Msa1429150:intron 45.0%
! CAGAAGGCACGCAATATAGA+CGG - tig0026448:23106-23125 Msa1429150:intron 45.0%
! TGTTGCTTCTGTTCACTTCC+AGG - tig0026448:23330-23349 Msa1429150:intron 45.0%
GTGCCTAGGACAGCTTATAA+AGG - tig0026448:23358-23377 Msa1429150:intron 45.0%
TCAAAGATTCTGGGCCAACA+AGG + tig0026448:23423-23442 None:intergenic 45.0%
TGATCATAGAGTGTGGCCTT+GGG - tig0026448:23747-23766 Msa1429150:intron 45.0%
!!! ATTTTTTTTTTTAAATAGTT+AGG - tig0026448:21100-21119 Msa1429150:intron 5.0%
! GAGACGACTGAGCGAGTTTT+TGG - tig0026448:15474-15493 Msa1429150:three_prime_UTR 50.0%
GGCTACATTCTTGCTCTCGA+CGG + tig0026448:15898-15917 None:intergenic 50.0%
CTTTCTTAGTGTGCAGCAGC+AGG - tig0026448:15983-16002 Msa1429150:three_prime_UTR 50.0%
CAGCAAGCAAGCAAGCAAAC+AGG + tig0026448:16105-16124 None:intergenic 50.0%
ATGATGACAACAGCTGCCAC+TGG + tig0026448:16186-16205 None:intergenic 50.0%
AGTGGCAGCTGTTGTCATCA+TGG - tig0026448:16185-16204 Msa1429150:three_prime_UTR 50.0%
!! ATCGTGCTGATTACCTGGAG+AGG - tig0026448:16214-16233 Msa1429150:three_prime_UTR 50.0%
TACTCCTTGCTAAGGCAACG+AGG + tig0026448:16901-16920 None:intergenic 50.0%
!! GATGGGAAGGTGTTTGCCTT+AGG - tig0026448:17115-17134 Msa1429150:three_prime_UTR 50.0%
CGATGCTCAAACTCACCCTA+AGG + tig0026448:17134-17153 None:intergenic 50.0%
GCCGTATCTCTAGCTGATGT+AGG - tig0026448:17172-17191 Msa1429150:three_prime_UTR 50.0%
GGAGAGTGGACAAATGTGGA+TGG + tig0026448:17329-17348 None:intergenic 50.0%
!! AAATACTTGTGGGGGTGTCC+AGG + tig0026448:17586-17605 None:intergenic 50.0%
AGATCATCCTACGCAGGATC+AGG - tig0026448:17702-17721 Msa1429150:intron 50.0%
GATCATCCTACGCAGGATCA+GGG - tig0026448:17703-17722 Msa1429150:intron 50.0%
AGAATCAGGCATACTGGTCC+TGG - tig0026448:19044-19063 Msa1429150:intron 50.0%
! CCTGGCCTTTCAGTTTGAAC+CGG + tig0026448:20352-20371 None:intergenic 50.0%
! GGTCATTACAAGTGGGCTCT+TGG - tig0026448:20483-20502 Msa1429150:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - tig0026448:21223-21242 Msa1429150:intron 50.0%
!! GAGGCGGCTTGTTATGTTGA+AGG + tig0026448:21615-21634 None:intergenic 50.0%
ACAAGCAGATCTTGTGGTGG+GGG - tig0026448:21673-21692 Msa1429150:intron 50.0%
TATCGCTCGGACTTCTTTCC+TGG - tig0026448:22057-22076 Msa1429150:intron 50.0%
TCGGACTTCTTTCCTGGACT+AGG - tig0026448:22063-22082 Msa1429150:intron 50.0%
! GGATGCTGGCTAGATCTACA+TGG - tig0026448:22088-22107 Msa1429150:intron 50.0%
! GGATATGCCTTCGGCCATTT+TGG + tig0026448:22126-22145 None:intergenic 50.0%
ACTTCACCTACTGGGACGAT+TGG - tig0026448:22381-22400 Msa1429150:intron 50.0%
TCTCAACCAATCGTCCCAGT+AGG + tig0026448:22390-22409 None:intergenic 50.0%
GAAGGTCGACTGGAAGTCAA+TGG - tig0026448:22912-22931 Msa1429150:intron 50.0%
GCTTCTGTTCACTTCCAGGA+TGG - tig0026448:23334-23353 Msa1429150:intron 50.0%
AGGTACGGACGAGAATGTGA+TGG - tig0026448:23583-23602 Msa1429150:intron 50.0%
GTGATCATAGAGTGTGGCCT+TGG - tig0026448:23746-23765 Msa1429150:intron 50.0%
! GATCATAGAGTGTGGCCTTG+GGG - tig0026448:23748-23767 Msa1429150:intron 50.0%
AGGCAACTCTGAGCTCAACC+TGG + tig0026448:16085-16104 None:intergenic 55.0%
TGGTCGAGGCTTGTGAGGTA+AGG + tig0026448:16687-16706 None:intergenic 55.0%
AAAGGTGGTCGAGGCTTGTG+AGG + tig0026448:16692-16711 None:intergenic 55.0%
! TGTGCTGGTAAAGGTGGTCG+AGG + tig0026448:16701-16720 None:intergenic 55.0%
CTCACTTGAGGGACTGCCAA+CGG + tig0026448:16829-16848 None:intergenic 55.0%
AGAGCCTCGTTGCCTTAGCA+AGG - tig0026448:16894-16913 Msa1429150:three_prime_UTR 55.0%
GAGTCGAGATCATCCTACGC+AGG - tig0026448:17696-17715 Msa1429150:intron 55.0%
ATCCTACGCAGGATCAGGGA+GGG - tig0026448:17707-17726 Msa1429150:intron 55.0%
AGTGACAGAACAGTTGCGCG+TGG + tig0026448:18162-18181 None:intergenic 55.0%
! CTAGGCGTGAGGGAGTGTAT+TGG + tig0026448:19216-19235 None:intergenic 55.0%
ACACACCAAGCCCAACAGCT+AGG + tig0026448:19234-19253 None:intergenic 55.0%
!! TAGCTGTTGGGCTTGGTGTG+TGG - tig0026448:19233-19252 Msa1429150:intron 55.0%
TGGCATAGTGGTAGGGGCTT+GGG - tig0026448:20038-20057 Msa1429150:intron 55.0%
CCGGTTCAAACTGAAAGGCC+AGG - tig0026448:20349-20368 Msa1429150:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + tig0026448:21222-21241 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - tig0026448:21219-21238 Msa1429150:intron 55.0%
TTTAAGCAACCAGCCGCAGC+AGG - tig0026448:21641-21660 Msa1429150:intron 55.0%
!! TTGTTGTTTCCTGCTGCGGC+TGG + tig0026448:21653-21672 None:intergenic 55.0%
! TCCTGGACTAGGATGGATGC+TGG - tig0026448:22074-22093 Msa1429150:intron 55.0%
TGGAGCAGACTTCGCTCAGA+AGG - tig0026448:23090-23109 Msa1429150:intron 55.0%
ACTTCCAGGATGGTGTGCCT+AGG - tig0026448:23344-23363 Msa1429150:intron 55.0%
CATCCTACGCAGGATCAGGG+AGG - tig0026448:17706-17725 Msa1429150:intron 60.0%
TCCTACGCAGGATCAGGGAG+GGG - tig0026448:17708-17727 Msa1429150:intron 60.0%
ACTCCCTCACGCCTAGCTGT+TGG - tig0026448:19220-19239 Msa1429150:intron 60.0%
CTCCCTCACGCCTAGCTGTT+GGG - tig0026448:19221-19240 Msa1429150:intron 60.0%
AGCCCAACAGCTAGGCGTGA+GGG + tig0026448:19226-19245 None:intergenic 60.0%
AAGCCCAACAGCTAGGCGTG+AGG + tig0026448:19227-19246 None:intergenic 60.0%
TCACGCCTAGCTGTTGGGCT+TGG - tig0026448:19226-19245 Msa1429150:intron 60.0%
GTGGCATAGTGGTAGGGGCT+TGG - tig0026448:20037-20056 Msa1429150:intron 60.0%
! AGCAGATCTTGTGGTGGGGG+TGG - tig0026448:21676-21695 Msa1429150:intron 60.0%
! GCAGATCTTGTGGTGGGGGT+GGG - tig0026448:21677-21696 Msa1429150:intron 60.0%
! CAGATCTTGTGGTGGGGGTG+GGG - tig0026448:21678-21697 Msa1429150:intron 60.0%
GCCAGCATCCATCCTAGTCC+AGG + tig0026448:22078-22097 None:intergenic 60.0%
GCGAAGTCTGCTCCAGAGAC+AGG + tig0026448:23085-23104 None:intergenic 60.0%
CTGTCCTAGGCACACCATCC+TGG + tig0026448:23351-23370 None:intergenic 60.0%
ACCCCTCCCTGATCCTGCGT+AGG + tig0026448:17712-17731 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0026448 gene 15420 23947 15420 ID=Msa1429150;Name=Msa1429150
tig0026448 mRNA 15420 23947 15420 ID=Msa1429150-mRNA-1;Parent=Msa1429150;Name=Msa1429150-mRNA-1;_AED=0.15;_eAED=0.15;_QI=80|1|1|1|0.93|0.93|16|1201|286
tig0026448 exon 15420 16015 15420 ID=Msa1429150-mRNA-1:exon:6385;Parent=Msa1429150-mRNA-1
tig0026448 exon 16160 16330 16160 ID=Msa1429150-mRNA-1:exon:6384;Parent=Msa1429150-mRNA-1
tig0026448 exon 16413 16451 16413 ID=Msa1429150-mRNA-1:exon:6383;Parent=Msa1429150-mRNA-1
tig0026448 exon 16536 16598 16536 ID=Msa1429150-mRNA-1:exon:6382;Parent=Msa1429150-mRNA-1
tig0026448 exon 16886 17318 16886 ID=Msa1429150-mRNA-1:exon:6381;Parent=Msa1429150-mRNA-1
tig0026448 exon 18482 18543 18482 ID=Msa1429150-mRNA-1:exon:6380;Parent=Msa1429150-mRNA-1
tig0026448 exon 18651 18720 18651 ID=Msa1429150-mRNA-1:exon:6379;Parent=Msa1429150-mRNA-1
tig0026448 exon 18815 18883 18815 ID=Msa1429150-mRNA-1:exon:6378;Parent=Msa1429150-mRNA-1
tig0026448 exon 18967 19033 18967 ID=Msa1429150-mRNA-1:exon:6377;Parent=Msa1429150-mRNA-1
tig0026448 exon 22786 22848 22786 ID=Msa1429150-mRNA-1:exon:6376;Parent=Msa1429150-mRNA-1
tig0026448 exon 22983 23028 22983 ID=Msa1429150-mRNA-1:exon:6375;Parent=Msa1429150-mRNA-1
tig0026448 exon 23111 23187 23111 ID=Msa1429150-mRNA-1:exon:6374;Parent=Msa1429150-mRNA-1
tig0026448 exon 23282 23316 23282 ID=Msa1429150-mRNA-1:exon:6373;Parent=Msa1429150-mRNA-1
tig0026448 exon 23420 23570 23420 ID=Msa1429150-mRNA-1:exon:6372;Parent=Msa1429150-mRNA-1
tig0026448 exon 23656 23706 23656 ID=Msa1429150-mRNA-1:exon:6371;Parent=Msa1429150-mRNA-1
tig0026448 exon 23799 23947 23799 ID=Msa1429150-mRNA-1:exon:6370;Parent=Msa1429150-mRNA-1
tig0026448 five_prime_UTR 23868 23947 23868 ID=Msa1429150-mRNA-1:five_prime_utr;Parent=Msa1429150-mRNA-1
tig0026448 CDS 23799 23867 23799 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 23656 23706 23656 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 23420 23570 23420 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 23282 23316 23282 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 23111 23187 23111 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 22983 23028 22983 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 22786 22848 22786 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 18967 19033 18967 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 18815 18883 18815 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 18651 18720 18651 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 18482 18543 18482 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 CDS 17218 17318 17218 ID=Msa1429150-mRNA-1:cds;Parent=Msa1429150-mRNA-1
tig0026448 three_prime_UTR 16886 17217 16886 ID=Msa1429150-mRNA-1:three_prime_utr;Parent=Msa1429150-mRNA-1
tig0026448 three_prime_UTR 16536 16598 16536 ID=Msa1429150-mRNA-1:three_prime_utr;Parent=Msa1429150-mRNA-1
tig0026448 three_prime_UTR 16413 16451 16413 ID=Msa1429150-mRNA-1:three_prime_utr;Parent=Msa1429150-mRNA-1
tig0026448 three_prime_UTR 16160 16330 16160 ID=Msa1429150-mRNA-1:three_prime_utr;Parent=Msa1429150-mRNA-1
tig0026448 three_prime_UTR 15420 16015 15420 ID=Msa1429150-mRNA-1:three_prime_utr;Parent=Msa1429150-mRNA-1
Gene Sequence

>Msa1429150

ATGGCGAAATTTTGGTGTGATTTTCGGTTTCTTCTCTTTGTTGCAGCCTTGGTGTTCATCTACATCCAGATGAGACTTTTCGCAACACAATCACAATATGCTGATCGCCTCGCTGTTGCTATTGAAGCTGAAAATCACTGTACAACTCAAATCCGATCACTCATTGATCAGATTAGCTTGCAACAAGGACGCATTCTCGACTTACAACAAGAAAGGAACCGTCGAGAGCAAGAATGTAGCCAAATCAAGTCTCTTGTTCAAGATCTTGAAAGAAAAGATGTACAAAGGCTGATTGATAAAGTCCAGGTTCCAGTGGCAGCTGTTGTCATCATGGCATGTAATCGTGCTGATTACCTGGAGAGGACTATCAATTCTGTATTGAAATATCAAAGGCCCATTTCTTCAAGATTTCCTTTATTTGTATCACAGGATGGATCAAATTCAGACGTCAAAAGTAAGGCTCTGAGCTACGATGAGCTATCTCATATGCAGCACTTAGATTTTGAGCCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTATAAGATTGCACGTCATTACAAGTGGGCTCTTGGTCAATTGTTCGACAAGCATAACTTCAACAGAGTCATCATTCTCGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTACTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCATGGAATGATAATGGACAGAAGCAGTTTGTACATGATCCATACGAACTTTATCGCTCGGACTTCTTTCCTGGACTAGGATGGATGCTGGCTAGATCTACATGGGATGAACTATCACCAAAATGGCCGAAGGCATATCCTTAA

Protein sequence

>Msa1429150

MAKFWCDFRFLLFVAALVFIYIQMRLFATQSQYADRLAVAIEAENHCTTQIRSLIDQISLQQGRILDLQQERNRREQECSQIKSLVQDLERKDVQRLIDKVQVPVAAVVIMACNRADYLERTINSVLKYQRPISSRFPLFVSQDGSNSDVKSKALSYDELSHMQHLDFEPVQTERPGELIAYYKIARHYKWALGQLFDKHNFNRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLARSTWDELSPKWPKAYP*