Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438970 | AES74353.1 | 98.252 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438970 | sp|Q9XGM8|MGAT1_ARATH | 72.281 | 285 | 79 | 0 | 1 | 285 | 1 | 285 | 8.07e-159 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438970 | G7J9B0 | 98.252 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa1438970 | 0.806317 | 8.723705e-50 | -8.615850e-47 |
| Msa0006400 | Msa1438970 | 0.806945 | 6.427973e-50 | -8.615850e-47 |
| Msa0007280 | Msa1438970 | 0.804240 | 2.375383e-49 | -8.615850e-47 |
| Msa0012530 | Msa1438970 | 0.801655 | 8.127915e-49 | -8.615850e-47 |
| Msa0017510 | Msa1438970 | 0.814609 | 1.412107e-51 | -8.615850e-47 |
| Msa0028640 | Msa1438970 | 0.802424 | 5.648514e-49 | -8.615850e-47 |
| Msa0040450 | Msa1438970 | 0.819415 | 1.175804e-52 | -8.615850e-47 |
| Msa0045790 | Msa1438970 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0055740 | Msa1438970 | 0.824898 | 6.288237e-54 | -8.615850e-47 |
| Msa0116770 | Msa1438970 | 0.814041 | 1.885132e-51 | -8.615850e-47 |
| Msa1360060 | Msa1438970 | 0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa1367080 | Msa1438970 | 0.825883 | 3.676114e-54 | -8.615850e-47 |
| Msa1372760 | Msa1438970 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa1376890 | Msa1438970 | 0.828121 | 1.072221e-54 | -8.615850e-47 |
| Msa1378760 | Msa1438970 | 0.816972 | 4.198193e-52 | -8.615850e-47 |
| Msa1384350 | Msa1438970 | 0.815599 | 8.510422e-52 | -8.615850e-47 |
| Msa1393410 | Msa1438970 | 0.839477 | 1.547841e-57 | -8.615850e-47 |
| Msa1402730 | Msa1438970 | 0.811126 | 8.183797e-51 | -8.615850e-47 |
| Msa1403480 | Msa1438970 | 0.802665 | 5.038106e-49 | -8.615850e-47 |
| Msa1409700 | Msa1438970 | 0.804818 | 1.799513e-49 | -8.615850e-47 |
| Msa1420290 | Msa1438970 | 0.801078 | 1.067078e-48 | -8.615850e-47 |
| Msa1423880 | Msa1438970 | 0.814332 | 1.625933e-51 | -8.615850e-47 |
| Msa1424290 | Msa1438970 | 0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa1429150 | Msa1438970 | 0.940365 | 2.644543e-100 | -8.615850e-47 |
| Msa1435420 | Msa1438970 | 0.839304 | 1.716412e-57 | -8.615850e-47 |
| Msa1438970 | Msa1439320 | 0.800303 | 1.535365e-48 | -8.615850e-47 |
| Msa1438970 | Msa1453250 | 0.815493 | 8.989437e-52 | -8.615850e-47 |
| Msa1438970 | Msa1455460 | 0.805906 | 1.064382e-49 | -8.615850e-47 |
| Msa1438970 | Msa1461250 | -0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0608620 | Msa1438970 | 0.815871 | 7.402613e-52 | -8.615850e-47 |
| Msa0621590 | Msa1438970 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa0626280 | Msa1438970 | 0.833700 | 4.587269e-56 | -8.615850e-47 |
| Msa0626410 | Msa1438970 | 0.816690 | 4.856382e-52 | -8.615850e-47 |
| Msa0633700 | Msa1438970 | 0.814841 | 1.254368e-51 | -8.615850e-47 |
| Msa0648880 | Msa1438970 | 0.826269 | 2.975793e-54 | -8.615850e-47 |
| Msa0657610 | Msa1438970 | 0.814549 | 1.456121e-51 | -8.615850e-47 |
| Msa0657970 | Msa1438970 | 0.825633 | 4.213974e-54 | -8.615850e-47 |
| Msa0658570 | Msa1438970 | 0.838431 | 2.888423e-57 | -8.615850e-47 |
| Msa0664570 | Msa1438970 | 0.810532 | 1.099812e-50 | -8.615850e-47 |
| Msa0682550 | Msa1438970 | 0.808842 | 2.539204e-50 | -8.615850e-47 |
| Msa0691380 | Msa1438970 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa0692230 | Msa1438970 | 0.816442 | 5.517352e-52 | -8.615850e-47 |
| Msa0693380 | Msa1438970 | 0.827436 | 1.565952e-54 | -8.615850e-47 |
| Msa0703490 | Msa1438970 | 0.824253 | 8.922540e-54 | -8.615850e-47 |
| Msa0723990 | Msa1438970 | 0.801421 | 9.074634e-49 | -8.615850e-47 |
| Msa0732840 | Msa1438970 | 0.808322 | 3.279181e-50 | -8.615850e-47 |
| Msa0753790 | Msa1438970 | 0.804448 | 2.150194e-49 | -8.615850e-47 |
| Msa0764570 | Msa1438970 | 0.804347 | 2.256420e-49 | -8.615850e-47 |
| Msa0769390 | Msa1438970 | 0.807095 | 5.975322e-50 | -8.615850e-47 |
| Msa0786340 | Msa1438970 | 0.806238 | 9.065773e-50 | -8.615850e-47 |
| Msa0795050 | Msa1438970 | 0.800227 | 1.590695e-48 | -8.615850e-47 |
| Msa0802470 | Msa1438970 | -0.821025 | 5.027721e-53 | -8.615850e-47 |
| Msa0812990 | Msa1438970 | 0.800970 | 1.122497e-48 | -8.615850e-47 |
| Msa0816710 | Msa1438970 | 0.803677 | 3.110204e-49 | -8.615850e-47 |
| Msa0828540 | Msa1438970 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa0829620 | Msa1438970 | 0.803080 | 4.133916e-49 | -8.615850e-47 |
| Msa0832370 | Msa1438970 | 0.804730 | 1.877667e-49 | -8.615850e-47 |
| Msa0140390 | Msa1438970 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
| Msa0157290 | Msa1438970 | 0.814393 | 1.575979e-51 | -8.615850e-47 |
| Msa0165210 | Msa1438970 | 0.806477 | 8.071966e-50 | -8.615850e-47 |
| Msa0165220 | Msa1438970 | 0.817244 | 3.646417e-52 | -8.615850e-47 |
| Msa0165510 | Msa1438970 | 0.824006 | 1.019691e-53 | -8.615850e-47 |
| Msa0191250 | Msa1438970 | 0.806261 | 8.965790e-50 | -8.615850e-47 |
| Msa0197660 | Msa1438970 | 0.800094 | 1.693363e-48 | -8.615850e-47 |
| Msa0201070 | Msa1438970 | 0.853441 | 2.385209e-61 | -8.615850e-47 |
| Msa0212310 | Msa1438970 | 0.806503 | 7.969556e-50 | -8.615850e-47 |
| Msa0215320 | Msa1438970 | -0.811251 | 7.684958e-51 | -8.615850e-47 |
| Msa0220740 | Msa1438970 | 0.830511 | 2.818791e-55 | -8.615850e-47 |
| Msa0221060 | Msa1438970 | 0.807436 | 5.059115e-50 | -8.615850e-47 |
| Msa0223410 | Msa1438970 | -0.800366 | 1.490702e-48 | -8.615850e-47 |
| Msa1229600 | Msa1438970 | 0.835991 | 1.215481e-56 | -8.615850e-47 |
| Msa1238470 | Msa1438970 | 0.810456 | 1.142306e-50 | -8.615850e-47 |
| Msa1238930 | Msa1438970 | 0.817927 | 2.558191e-52 | -8.615850e-47 |
| Msa1242220 | Msa1438970 | 0.815055 | 1.124543e-51 | -8.615850e-47 |
| Msa1242230 | Msa1438970 | 0.808706 | 2.714768e-50 | -8.615850e-47 |
| Msa1242240 | Msa1438970 | 0.814197 | 1.741915e-51 | -8.615850e-47 |
| Msa1244250 | Msa1438970 | 0.804047 | 2.604903e-49 | -8.615850e-47 |
| Msa1261250 | Msa1438970 | 0.827188 | 1.795732e-54 | -8.615850e-47 |
| Msa1264020 | Msa1438970 | 0.806374 | 8.483619e-50 | -8.615850e-47 |
| Msa1271290 | Msa1438970 | 0.813905 | 2.020239e-51 | -8.615850e-47 |
| Msa1273030 | Msa1438970 | 0.800242 | 1.580197e-48 | -8.615850e-47 |
| Msa1278840 | Msa1438970 | 0.823977 | 1.035732e-53 | -8.615850e-47 |
| Msa1283860 | Msa1438970 | 0.830910 | 2.250989e-55 | -8.615850e-47 |
| Msa1284680 | Msa1438970 | 0.802757 | 4.821438e-49 | -8.615850e-47 |
| Msa1291660 | Msa1438970 | 0.801386 | 9.226832e-49 | -8.615850e-47 |
| Msa1308380 | Msa1438970 | 0.802558 | 5.299712e-49 | -8.615850e-47 |
| Msa1310210 | Msa1438970 | 0.842588 | 2.359361e-58 | -8.615850e-47 |
| Msa1313150 | Msa1438970 | 0.806998 | 6.264877e-50 | -8.615850e-47 |
| Msa1322890 | Msa1438970 | 0.815498 | 8.963158e-52 | -8.615850e-47 |
| Msa1324780 | Msa1438970 | 0.829693 | 4.462272e-55 | -8.615850e-47 |
| Msa1336490 | Msa1438970 | 0.811457 | 6.933244e-51 | -8.615850e-47 |
| Msa0366970 | Msa1438970 | 0.808455 | 3.071002e-50 | -8.615850e-47 |
| Msa0370110 | Msa1438970 | 0.811463 | 6.913674e-51 | -8.615850e-47 |
| Msa0388960 | Msa1438970 | 0.811938 | 5.450326e-51 | -8.615850e-47 |
| Msa0414230 | Msa1438970 | 0.818336 | 2.066855e-52 | -8.615850e-47 |
| Msa0417100 | Msa1438970 | 0.800447 | 1.434936e-48 | -8.615850e-47 |
| Msa0432300 | Msa1438970 | 0.817522 | 3.157764e-52 | -8.615850e-47 |
| Msa0443260 | Msa1438970 | 0.827350 | 1.642305e-54 | -8.615850e-47 |
| Msa0443290 | Msa1438970 | 0.808683 | 2.745005e-50 | -8.615850e-47 |
| Msa0459470 | Msa1438970 | 0.814565 | 1.444114e-51 | -8.615850e-47 |
| Msa0468290 | Msa1438970 | 0.800317 | 1.525427e-48 | -8.615850e-47 |
| Msa0476110 | Msa1438970 | 0.985968 | 3.018381e-165 | -8.615850e-47 |
| Msa0480980 | Msa1438970 | 0.803029 | 4.235894e-49 | -8.615850e-47 |
| Msa1004840 | Msa1438970 | 0.807962 | 3.912149e-50 | -8.615850e-47 |
| Msa1014540 | Msa1438970 | 0.819144 | 1.355081e-52 | -8.615850e-47 |
| Msa1068200 | Msa1438970 | -0.802794 | 4.736883e-49 | -8.615850e-47 |
| Msa1075220 | Msa1438970 | -0.811668 | 6.238610e-51 | -8.615850e-47 |
| Msa1082500 | Msa1438970 | 0.831926 | 1.265708e-55 | -8.615850e-47 |
| Msa0239800 | Msa1438970 | 0.803686 | 3.096150e-49 | -8.615850e-47 |
| Msa0243710 | Msa1438970 | 0.808982 | 2.369781e-50 | -8.615850e-47 |
| Msa0258760 | Msa1438970 | 0.808192 | 3.494421e-50 | -8.615850e-47 |
| Msa0262510 | Msa1438970 | 0.811290 | 7.538276e-51 | -8.615850e-47 |
| Msa0317510 | Msa1438970 | 0.810116 | 1.352726e-50 | -8.615850e-47 |
| Msa0323080 | Msa1438970 | 0.804439 | 2.159401e-49 | -8.615850e-47 |
| Msa0331920 | Msa1438970 | 0.819890 | 9.159730e-53 | -8.615850e-47 |
| Msa0338110 | Msa1438970 | 0.816668 | 4.910132e-52 | -8.615850e-47 |
| Msa0350720 | Msa1438970 | 0.807943 | 3.948357e-50 | -8.615850e-47 |
| Msa1107800 | Msa1438970 | 0.801694 | 7.979271e-49 | -8.615850e-47 |
| Msa1117170 | Msa1438970 | 0.808138 | 3.588231e-50 | -8.615850e-47 |
| Msa1151730 | Msa1438970 | 0.803774 | 2.968975e-49 | -8.615850e-47 |
| Msa1154710 | Msa1438970 | 0.807228 | 5.600182e-50 | -8.615850e-47 |
| Msa1162550 | Msa1438970 | -0.804962 | 1.679381e-49 | -8.615850e-47 |
| Msa1192730 | Msa1438970 | 0.800328 | 1.517342e-48 | -8.615850e-47 |
| Msa1195920 | Msa1438970 | 0.817994 | 2.470183e-52 | -8.615850e-47 |
| Msa1199220 | Msa1438970 | 0.805767 | 1.138918e-49 | -8.615850e-47 |
| Msa1222970 | Msa1438970 | 0.820016 | 8.568698e-53 | -8.615850e-47 |
| Msa0484780 | Msa1438970 | 0.814762 | 1.306240e-51 | -8.615850e-47 |
| Msa0490870 | Msa1438970 | 0.818946 | 1.503497e-52 | -8.615850e-47 |
| Msa0492880 | Msa1438970 | 0.812375 | 4.375943e-51 | -8.615850e-47 |
| Msa0497780 | Msa1438970 | 0.800897 | 1.161767e-48 | -8.615850e-47 |
| Msa0498220 | Msa1438970 | 0.834477 | 2.930169e-56 | -8.615850e-47 |
| Msa0502890 | Msa1438970 | 0.813162 | 2.942699e-51 | -8.615850e-47 |
| Msa0503060 | Msa1438970 | 0.804086 | 2.556773e-49 | -8.615850e-47 |
| Msa0506450 | Msa1438970 | 0.826842 | 2.173033e-54 | -8.615850e-47 |
| Msa0512900 | Msa1438970 | 0.803373 | 3.595695e-49 | -8.615850e-47 |
| Msa0533070 | Msa1438970 | 0.816992 | 4.153721e-52 | -8.615850e-47 |
| Msa0548170 | Msa1438970 | 0.805225 | 1.479359e-49 | -8.615850e-47 |
| Msa0555020 | Msa1438970 | 0.810273 | 1.251439e-50 | -8.615850e-47 |
| Msa0562440 | Msa1438970 | 0.801554 | 8.523635e-49 | -8.615850e-47 |
| Msa0567020 | Msa1438970 | 0.833112 | 6.430184e-56 | -8.615850e-47 |
| Msa0581760 | Msa1438970 | 0.816865 | 4.435471e-52 | -8.615850e-47 |
| Msa0585230 | Msa1438970 | 0.805348 | 1.393862e-49 | -8.615850e-47 |
| Msa0601850 | Msa1438970 | 0.802658 | 5.054642e-49 | -8.615850e-47 |
| Msa0602240 | Msa1438970 | 0.808446 | 3.085487e-50 | -8.615850e-47 |
| Msa0602250 | Msa1438970 | 0.809081 | 2.256278e-50 | -8.615850e-47 |
| Msa0844240 | Msa1438970 | 0.819308 | 1.243463e-52 | -8.615850e-47 |
| Msa0867890 | Msa1438970 | 0.822848 | 1.902208e-53 | -8.615850e-47 |
| Msa0880140 | Msa1438970 | 0.811138 | 8.134279e-51 | -8.615850e-47 |
| Msa0880950 | Msa1438970 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0886330 | Msa1438970 | -0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa0891040 | Msa1438970 | 0.806267 | 8.936817e-50 | -8.615850e-47 |
| Msa0903700 | Msa1438970 | 0.800046 | 1.731453e-48 | -8.615850e-47 |
| Msa0908050 | Msa1438970 | 0.806450 | 8.179862e-50 | -8.615850e-47 |
| Msa0909120 | Msa1438970 | 0.831332 | 1.772562e-55 | -8.615850e-47 |
| Msa0909140 | Msa1438970 | 0.803075 | 4.144195e-49 | -8.615850e-47 |
| Msa0913480 | Msa1438970 | -0.814268 | 1.679945e-51 | -8.615850e-47 |
| Msa0922410 | Msa1438970 | 0.801829 | 7.487187e-49 | -8.615850e-47 |
| Msa0925250 | Msa1438970 | 0.805463 | 1.318852e-49 | -8.615850e-47 |
| Msa0932780 | Msa1438970 | -0.807652 | 4.552770e-50 | -8.615850e-47 |
| Msa0935910 | Msa1438970 | 0.801979 | 6.971465e-49 | -8.615850e-47 |
| Msa0952120 | Msa1438970 | 0.811335 | 7.372308e-51 | -8.615850e-47 |
| Msa0959360 | Msa1438970 | 0.803354 | 3.628135e-49 | -8.615850e-47 |
| Msa0966090 | Msa1438970 | 0.832531 | 8.962896e-56 | -8.615850e-47 |
| Msa0975220 | Msa1438970 | 0.805642 | 1.209549e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438970 | MtrunA17_Chr3g0146031 | 98.252 | 286 | 5 | 0 | 1 | 286 | 1 | 286 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438970 | AT4G38240.1 | 72.281 | 285 | 79 | 0 | 1 | 285 | 1 | 285 | 8.20e-160 | 452 |
| Msa1438970 | AT4G38240.2 | 72.281 | 285 | 79 | 0 | 1 | 285 | 1 | 285 | 8.20e-160 | 452 |
| Msa1438970 | AT4G38240.3 | 71.786 | 280 | 79 | 0 | 1 | 280 | 1 | 280 | 8.66e-156 | 442 |
Find 117 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTTGCGACATTTGTTTA+TGG | 0.208583 | tig0028674:-12734 | Msa1438970:three_prime_UTR |
| GAAAACATTGCTCAACAATT+TGG | 0.214206 | tig0028674:-11747 | Msa1438970:three_prime_UTR |
| GGATATGCCTTCGGCCATTT+TGG | 0.228883 | tig0028674:+12790 | None:intergenic |
| TGAAGTAGCTTCAAAGATTC+TGG | 0.231515 | tig0028674:+11483 | None:intergenic |
| TATCGCTCGGACTTCTTTCC+TGG | 0.251249 | tig0028674:-12856 | Msa1438970:CDS |
| TTTGGGAAATGGCGAAATTT+TGG | 0.251374 | tig0028674:-19424 | Msa1438970:exon |
| TAAAGGAAATCTTGAAGAAA+TGG | 0.304704 | tig0028674:+18566 | None:intergenic |
| TATCCATTCTAGGTCCATTA+TGG | 0.306360 | tig0028674:-14100 | Msa1438970:intron |
| TCTTCTCTTTGTTGCAGCCT+TGG | 0.315376 | tig0028674:-19387 | Msa1438970:CDS |
| CTTGAACAAGAGACTTGATT+TGG | 0.319300 | tig0028674:+19000 | None:intergenic |
| ATGGGGAAGAATTCCAGTTT+AGG | 0.332261 | tig0028674:-12715 | Msa1438970:three_prime_UTR |
| AGAGAGGGTAATGTGAAATT+TGG | 0.338184 | tig0028674:-19500 | None:intergenic |
| TGGACTTCATTCAGCTTGAT+TGG | 0.364035 | tig0028674:+12105 | None:intergenic |
| TTATATGTTCTGCATACTTC+GGG | 0.365657 | tig0028674:+12467 | None:intergenic |
| GGGATGAACTATCACCAAAA+TGG | 0.369625 | tig0028674:-12804 | Msa1438970:CDS |
| GTCGCAAACACAAACAATAA+TGG | 0.374080 | tig0028674:+12746 | None:intergenic |
| CCTGGCCTTTCAGTTTGAAC+CGG | 0.375663 | tig0028674:+14563 | None:intergenic |
| GGTACCAACAGTTCCTAAAC+TGG | 0.376344 | tig0028674:+12702 | None:intergenic |
| AAGAAATGCACATCGAATAA+AGG | 0.381589 | tig0028674:+11088 | None:intergenic |
| GTTTCGTCATGGAATGATAA+TGG | 0.381929 | tig0028674:-14075 | Msa1438970:CDS |
| AATGGACTTGAGCTATTTGT+TGG | 0.383291 | tig0028674:-11983 | Msa1438970:three_prime_UTR |
| ATTGAATAAATTCTTAATGC+TGG | 0.390236 | tig0028674:-11459 | Msa1438970:three_prime_UTR |
| CCATGACGAAACAGCCATAA+TGG | 0.392943 | tig0028674:+14086 | None:intergenic |
| GAATGCTTAGTACTCCTTCA+TGG | 0.395475 | tig0028674:+12671 | None:intergenic |
| AATACCTGTGATACAAATAA+AGG | 0.404682 | tig0028674:+18549 | None:intergenic |
| CTTTGATTACTTTGAAGCTA+TGG | 0.412034 | tig0028674:-14240 | Msa1438970:CDS |
| TGTTTGCGACATTTGTTTAT+GGG | 0.423625 | tig0028674:-12733 | Msa1438970:three_prime_UTR |
| TCTGAAAACAACAACTCTCT+TGG | 0.430336 | tig0028674:+11413 | None:intergenic |
| TCAAAGTAATCAAAGAAATC+AGG | 0.439796 | tig0028674:+14248 | None:intergenic |
| TTTGACAAAACTTCACCTAC+TGG | 0.441854 | tig0028674:-12541 | Msa1438970:three_prime_UTR |
| AAAGGAAATCTTGAAGAAAT+GGG | 0.442893 | tig0028674:+18567 | None:intergenic |
| GTGATCATAGAGTGTGGCCT+TGG | 0.443056 | tig0028674:-11167 | Msa1438970:three_prime_UTR |
| ACGAAGCGTATATTCCTTGT+TGG | 0.443306 | tig0028674:-11507 | Msa1438970:three_prime_UTR |
| CTTGATCTCTACAAAATACA+TGG | 0.445682 | tig0028674:+11286 | None:intergenic |
| GTGCCTAGGACAGCTTATAA+AGG | 0.447968 | tig0028674:-11555 | Msa1438970:three_prime_UTR |
| CTGAAAACAACAACTCTCTT+GGG | 0.451162 | tig0028674:+11414 | None:intergenic |
| GTTATATGTTCTGCATACTT+CGG | 0.455588 | tig0028674:+12466 | None:intergenic |
| ATTTCCTTTATTTGTATCAC+AGG | 0.466127 | tig0028674:-18553 | Msa1438970:intron |
| GGTCATTACAAGTGGGCTCT+TGG | 0.466698 | tig0028674:-14429 | Msa1438970:CDS |
| TTGAATAAATTCTTAATGCT+GGG | 0.469653 | tig0028674:-11458 | Msa1438970:three_prime_UTR |
| TGATCATAGAGTGTGGCCTT+GGG | 0.471091 | tig0028674:-11166 | Msa1438970:three_prime_UTR |
| GAAGTAGCTTCAAAGATTCT+GGG | 0.477829 | tig0028674:+11484 | None:intergenic |
| TCGGACTTCTTTCCTGGACT+AGG | 0.478118 | tig0028674:-12850 | Msa1438970:CDS |
| AAGCTAAATGTTATAAAGCT+AGG | 0.483202 | tig0028674:+10995 | None:intergenic |
| GCGAAGTCTGCTCCAGAGAC+AGG | 0.486412 | tig0028674:+11831 | None:intergenic |
| TATCTATACTACGGATAGAA+AGG | 0.487249 | tig0028674:-11132 | Msa1438970:three_prime_UTR |
| AAATTCAGACGTCAAAAGTA+AGG | 0.488269 | tig0028674:-18389 | Msa1438970:CDS |
| AGTGGCAGCTGTTGTCATCA+TGG | 0.497854 | tig0028674:-18731 | Msa1438970:CDS |
| ACTTCACCTACTGGGACGAT+TGG | 0.499642 | tig0028674:-12532 | Msa1438970:three_prime_UTR |
| TTTGATCTTTACAAGATACA+TGG | 0.506278 | tig0028674:+11218 | None:intergenic |
| TAGTAAGCAATTAACTCTCC+TGG | 0.506538 | tig0028674:+14545 | None:intergenic |
| TACTCCTTCATGGTATATAG+TGG | 0.512049 | tig0028674:+12681 | None:intergenic |
| TTTGGTGGTTACGAAGAAGA+AGG | 0.515940 | tig0028674:-19482 | Msa1438970:five_prime_UTR |
| GAGGGTAATGTGAAATTTGG+TGG | 0.518929 | tig0028674:-19497 | Msa1438970:five_prime_UTR |
| TGCAGACGAACTTTATCGCT+CGG | 0.520518 | tig0028674:-12869 | Msa1438970:intron |
| AACAAGGAATATACGCTTCG+TGG | 0.520785 | tig0028674:+11509 | None:intergenic |
| CTTGGTGTTCATCTACATCC+AGG | 0.522745 | tig0028674:-19369 | Msa1438970:intron |
| GGCTACATTCTTGCTCTCGA+CGG | 0.523455 | tig0028674:+19021 | None:intergenic |
| GTATGCAGAACATATAACTT+TGG | 0.523714 | tig0028674:-12461 | Msa1438970:three_prime_UTR |
| AATTCCAGTTTAGGAACTGT+TGG | 0.524104 | tig0028674:-12706 | Msa1438970:three_prime_UTR |
| TGGTATATTTCAAGAGTGGA+AGG | 0.526230 | tig0028674:-11727 | Msa1438970:intron |
| GCCAGCATCCATCCTAGTCC+AGG | 0.526290 | tig0028674:+12838 | None:intergenic |
| CAGAATTGATAGTCCTCTCC+AGG | 0.527635 | tig0028674:+18689 | None:intergenic |
| ACTTCTTTCCTGGACTAGGA+TGG | 0.531658 | tig0028674:-12846 | Msa1438970:CDS |
| TCCTGGACTAGGATGGATGC+TGG | 0.534970 | tig0028674:-12839 | Msa1438970:CDS |
| CCATTATGGCTGTTTCGTCA+TGG | 0.538200 | tig0028674:-14086 | Msa1438970:CDS |
| GAAGGTCGACTGGAAGTCAA+TGG | 0.538850 | tig0028674:-12001 | Msa1438970:intron |
| AATCAAGCTGAATGAAGTCC+AGG | 0.541494 | tig0028674:-12103 | Msa1438970:intron |
| TTCTCGACTTACAACAAGAA+AGG | 0.541791 | tig0028674:-19046 | Msa1438970:CDS |
| TTGACAAAACTTCACCTACT+GGG | 0.542477 | tig0028674:-12540 | Msa1438970:three_prime_UTR |
| ACTCCTTTATAAGCTGTCCT+AGG | 0.545192 | tig0028674:+11552 | None:intergenic |
| ATGTAATCGTGCTGATTACC+TGG | 0.547620 | tig0028674:-18707 | Msa1438970:CDS |
| TTGAGCCGGTTCAAACTGAA+AGG | 0.550180 | tig0028674:-14568 | Msa1438970:CDS |
| GGATGCTGGCTAGATCTACA+TGG | 0.553110 | tig0028674:-12825 | Msa1438970:CDS |
| CCGGTTCAAACTGAAAGGCC+AGG | 0.554999 | tig0028674:-14563 | Msa1438970:CDS |
| GGACTTGAGCTATTTGTTGG+AGG | 0.555050 | tig0028674:-11980 | Msa1438970:intron |
| TGGAGCAGACTTCGCTCAGA+AGG | 0.556130 | tig0028674:-11823 | Msa1438970:three_prime_UTR |
| CGATGAGCTATCTCATATGC+AGG | 0.562275 | tig0028674:-18356 | Msa1438970:intron |
| TTGATCTTTACAAGATACAT+GGG | 0.562863 | tig0028674:+11219 | None:intergenic |
| ATGATGACAACAGCTGCCAC+TGG | 0.562931 | tig0028674:+18733 | None:intergenic |
| TAATCTGATCAATGAGTGAT+CGG | 0.568391 | tig0028674:+19087 | None:intergenic |
| TGGATTGAATGAAGGTCGAC+TGG | 0.576838 | tig0028674:-12011 | Msa1438970:intron |
| ACTTCCAGGATGGTGTGCCT+AGG | 0.576852 | tig0028674:-11569 | Msa1438970:intron |
| AGAAGATAATATCTATACTA+CGG | 0.577858 | tig0028674:-11141 | Msa1438970:three_prime_UTR |
| AAGGCTGATTGATAAAGTCC+AGG | 0.584981 | tig0028674:-18852 | Msa1438970:intron |
| TTATCCAACCTCAGATGACA+TGG | 0.598293 | tig0028674:-14279 | Msa1438970:intron |
| AATTTGGTATATTTCAAGAG+TGG | 0.599428 | tig0028674:-11731 | Msa1438970:three_prime_UTR |
| TATAAAGTATAAAGATCAGT+GGG | 0.600564 | tig0028674:-11775 | Msa1438970:three_prime_UTR |
| TTGATCTCTACAAAATACAT+GGG | 0.601855 | tig0028674:+11287 | None:intergenic |
| TCTCTACAAAATACATGGGA+TGG | 0.606050 | tig0028674:+11291 | None:intergenic |
| ACATCATAGTCTCTTTAGCT+CGG | 0.607010 | tig0028674:+11365 | None:intergenic |
| ATGTTCTGCATACTTCGGGT+CGG | 0.615835 | tig0028674:+12471 | None:intergenic |
| ACACATACTTATCCTTGTCA+AGG | 0.618408 | tig0028674:+14210 | None:intergenic |
| AACAGAGTCATCATTCTCGA+AGG | 0.620252 | tig0028674:-14381 | Msa1438970:intron |
| TCTTTACAAGATACATGGGA+TGG | 0.622612 | tig0028674:+11223 | None:intergenic |
| TTTCAGGAAAAGATGTACAA+AGG | 0.627774 | tig0028674:-18871 | Msa1438970:intron |
| CAGAAGGCACGCAATATAGA+CGG | 0.629864 | tig0028674:-11807 | Msa1438970:three_prime_UTR |
| TCAAAGATTCTGGGCCAACA+AGG | 0.632429 | tig0028674:+11493 | None:intergenic |
| AGATATTATCTTCTACCCCA+AGG | 0.632596 | tig0028674:+11150 | None:intergenic |
| GGTACCACTATATACCATGA+AGG | 0.635742 | tig0028674:-12685 | Msa1438970:three_prime_UTR |
| GTTTGCGACATTTGTTTATG+GGG | 0.635899 | tig0028674:-12732 | Msa1438970:three_prime_UTR |
| GATCATAGAGTGTGGCCTTG+GGG | 0.636583 | tig0028674:-11165 | Msa1438970:three_prime_UTR |
| TCTCAACCAATCGTCCCAGT+AGG | 0.642941 | tig0028674:+12526 | None:intergenic |
| ATCGTGCTGATTACCTGGAG+AGG | 0.643089 | tig0028674:-18702 | Msa1438970:CDS |
| GATCAGATTAGCTTGCAACA+AGG | 0.650241 | tig0028674:-19074 | Msa1438970:CDS |
| AGGTACGGACGAGAATGTGA+TGG | 0.652335 | tig0028674:-11330 | Msa1438970:three_prime_UTR |
| TGTGGTTGAAAGTGTAGGTA+CGG | 0.662240 | tig0028674:-11345 | Msa1438970:three_prime_UTR |
| TATGATGTGGTTGAAAGTGT+AGG | 0.663245 | tig0028674:-11350 | Msa1438970:three_prime_UTR |
| ACTATCACCAAAATGGCCGA+AGG | 0.673152 | tig0028674:-12797 | Msa1438970:CDS |
| GTATAAAGTATAAAGATCAG+TGG | 0.683838 | tig0028674:-11776 | Msa1438970:three_prime_UTR |
| GATGCTGGCTAGATCTACAT+GGG | 0.685395 | tig0028674:-12824 | Msa1438970:CDS |
| TATGGCAACTCTCCTTGACA+AGG | 0.700285 | tig0028674:-14222 | Msa1438970:CDS |
| AGATTAAAAGAGAATCACAA+AGG | 0.714494 | tig0028674:-12506 | Msa1438970:three_prime_UTR |
| GAGCTAAAGAGACTATGATG+TGG | 0.723249 | tig0028674:-11363 | Msa1438970:three_prime_UTR |
| GATACTGTGATCATAGAGTG+TGG | 0.744326 | tig0028674:-11173 | Msa1438970:three_prime_UTR |
| AATTACATACAGCAACAGCG+AGG | 0.779431 | tig0028674:+19217 | None:intergenic |
| CTGGATGTAGATGAACACCA+AGG | 0.780942 | tig0028674:+19370 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATAAATAAATAAA+AGG | + | tig0028674:11586-11605 | None:intergenic | 0.0% |
| !!! | TTTATAAATTTAAATTTTTT+GGG | + | tig0028674:14389-14408 | None:intergenic | 0.0% |
| !!! | TTTTATAAATTTAAATTTTT+TGG | + | tig0028674:14390-14409 | None:intergenic | 0.0% |
| !! | AATAAATTGTTGAATAATAA+TGG | + | tig0028674:11874-11893 | None:intergenic | 10.0% |
| !!! | AAATTTTTTGAAATTTATTG+GGG | + | tig0028674:14331-14350 | None:intergenic | 10.0% |
| !!! | CAAATTTTTTGAAATTTATT+GGG | + | tig0028674:14332-14351 | None:intergenic | 10.0% |
| !! | CTATTTAAAAAAAAAAATCA+GGG | + | tig0028674:16669-16688 | None:intergenic | 10.0% |
| !! | ACTATTTAAAAAAAAAAATC+AGG | + | tig0028674:16670-16689 | None:intergenic | 10.0% |
| !! | AATTCATAATAGTTTATTAT+AGG | - | tig0028674:17083-17102 | Msa1438970:intron | 10.0% |
| !! | AGAAATATTATTAAAATTTG+AGG | + | tig0028674:18141-18160 | None:intergenic | 10.0% |
| !! | AATAAATAAACAAACATTTC+AGG | - | tig0028674:11596-11615 | Msa1438970:intron | 15.0% |
| !! | TGATAGATACAAAATTAAAT+AGG | - | tig0028674:12418-12437 | Msa1438970:intron | 15.0% |
| !! | TGCAATTAAAAATAAGTTAA+AGG | - | tig0028674:13509-13528 | Msa1438970:intron | 15.0% |
| !!! | ATTCAATACATAAACATTTT+GGG | + | tig0028674:13817-13836 | None:intergenic | 15.0% |
| !!! | AATTCAATACATAAACATTT+TGG | + | tig0028674:13818-13837 | None:intergenic | 15.0% |
| !!! | ATTTTTCAAATTTTGCATTT+TGG | - | tig0028674:14274-14293 | Msa1438970:intron | 15.0% |
| !!! | GCAAATTTTTTGAAATTTAT+TGG | + | tig0028674:14333-14352 | None:intergenic | 15.0% |
| !! | CATTACTAAATATATTTGTT+TGG | + | tig0028674:14454-14473 | None:intergenic | 15.0% |
| !! | ACAAATATATTTAGTAATGA+AGG | - | tig0028674:14455-14474 | Msa1438970:intron | 15.0% |
| !!! | TTTGAAGAATTTAGAATTTT+AGG | + | tig0028674:14506-14525 | None:intergenic | 15.0% |
| !!! | TACCATATTTTGTTTAATAT+TGG | - | tig0028674:14655-14674 | Msa1438970:intron | 15.0% |
| !!! | ACCATATTTTGTTTAATATT+GGG | - | tig0028674:14656-14675 | Msa1438970:intron | 15.0% |
| !!! | TAAGTTAATATCTATTTTTG+CGG | + | tig0028674:16743-16762 | None:intergenic | 15.0% |
| !! | CTACTAAAGTATAAAAATTA+AGG | + | tig0028674:17717-17736 | None:intergenic | 15.0% |
| !! | CATAGAATAAATTAAAAACT+TGG | + | tig0028674:17837-17856 | None:intergenic | 15.0% |
| !!! | AAAAGTATTTAAGTTTTTAC+TGG | + | tig0028674:18169-18188 | None:intergenic | 15.0% |
| !!! | TTTAGCTTTTTTAATATTGT+TGG | + | tig0028674:18632-18651 | None:intergenic | 15.0% |
| !! | AAATTAAGGTTAAAAGATAG+AGG | + | tig0028674:11142-11161 | None:intergenic | 20.0% |
| !! | GAATAATAATGGCATAAAAT+AGG | + | tig0028674:11863-11882 | None:intergenic | 20.0% |
| !!! | TTGTATTTTTCAGATATCAA+AGG | - | tig0028674:11893-11912 | Msa1438970:intron | 20.0% |
| !!! | TTTTTTATGTATACACTTCT+AGG | - | tig0028674:11955-11974 | Msa1438970:intron | 20.0% |
| !!! | TGTAATTGCTTTTATTATAC+AGG | - | tig0028674:12064-12083 | Msa1438970:intron | 20.0% |
| !!! | GATAAAAGAGTATAAATAAG+AGG | + | tig0028674:13219-13238 | None:intergenic | 20.0% |
| !!! | GTTATCTGAAATTAAGTTAA+TGG | - | tig0028674:13540-13559 | Msa1438970:intron | 20.0% |
| !!! | TTAGAGAATTTTCAAAATGA+TGG | - | tig0028674:14166-14185 | Msa1438970:intron | 20.0% |
| !! | AAATTTGGAAATTGAAAGTA+GGG | + | tig0028674:14364-14383 | None:intergenic | 20.0% |
| !!! | ATTTCATTGTCATCATTTTT+GGG | + | tig0028674:14417-14436 | None:intergenic | 20.0% |
| !!! | AATTTCATTGTCATCATTTT+TGG | + | tig0028674:14418-14437 | None:intergenic | 20.0% |
| !! | ACTAAATATATTTGTTTGGA+TGG | + | tig0028674:14450-14469 | None:intergenic | 20.0% |
| !! | AAAATATGGTATTACATTTG+TGG | + | tig0028674:14646-14665 | None:intergenic | 20.0% |
| !!! | TTGTCTAAAAGTATGAAAAT+TGG | + | tig0028674:15287-15306 | None:intergenic | 20.0% |
| !!! | CTGAATGTTTTTTTTTTTGA+AGG | - | tig0028674:15461-15480 | Msa1438970:intron | 20.0% |
| !!! | ATTCACTATACATGTTTTTA+AGG | - | tig0028674:16330-16349 | Msa1438970:intron | 20.0% |
| !! | AATTTAACATTATCCATTCT+AGG | - | tig0028674:16373-16392 | Msa1438970:intron | 20.0% |
| !! | GATATAAAGCTACATAAATA+AGG | - | tig0028674:16529-16548 | Msa1438970:intron | 20.0% |
| !! | AGGTTAAAAAAAACAAAATC+AGG | - | tig0028674:16691-16710 | Msa1438970:intron | 20.0% |
| !! | CATTGAAATTGATGTAAATA+GGG | + | tig0028674:17455-17474 | None:intergenic | 20.0% |
| !! | AAAATTTATCAGAATAGCAT+TGG | + | tig0028674:17582-17601 | None:intergenic | 20.0% |
| !!! | AAACTTAAATACTTTTGTGT+TGG | - | tig0028674:18173-18192 | Msa1438970:intron | 20.0% |
| !!! | AACTTAAATACTTTTGTGTT+GGG | - | tig0028674:18174-18193 | Msa1438970:intron | 20.0% |
| !! | TATAAAGTATAAAGATCAGT+GGG | - | tig0028674:18708-18727 | Msa1438970:CDS | 20.0% |
| !! | AAAGGGAAAATAGAAAAAAA+GGG | + | tig0028674:18839-18858 | None:intergenic | 20.0% |
| !! | AAAAGGGAAAATAGAAAAAA+AGG | + | tig0028674:18840-18859 | None:intergenic | 20.0% |
| !! | AGAAGCAACAAAAAAAATAT+AGG | + | tig0028674:18890-18909 | None:intergenic | 20.0% |
| !! | ATTGAATAAATTCTTAATGC+TGG | - | tig0028674:19024-19043 | Msa1438970:CDS | 20.0% |
| !! | TTGAATAAATTCTTAATGCT+GGG | - | tig0028674:19025-19044 | Msa1438970:CDS | 20.0% |
| !! | AGAAGATAATATCTATACTA+CGG | - | tig0028674:19342-19361 | Msa1438970:intron | 20.0% |
| ! | GAAACGAAACGAATAAATTA+AGG | + | tig0028674:11156-11175 | None:intergenic | 25.0% |
| ! | AAAGGAAATCTTGAAGAAAT+GGG | + | tig0028674:11919-11938 | None:intergenic | 25.0% |
| ! | TAAAGGAAATCTTGAAGAAA+TGG | + | tig0028674:11920-11939 | None:intergenic | 25.0% |
| !! | ATTTCCTTTATTTGTATCAC+AGG | - | tig0028674:11930-11949 | Msa1438970:intron | 25.0% |
| ! | AATACCTGTGATACAAATAA+AGG | + | tig0028674:11937-11956 | None:intergenic | 25.0% |
| ! | CAGTTCTTAGGAATTTATTA+TGG | - | tig0028674:11982-12001 | Msa1438970:three_prime_UTR | 25.0% |
| !!! | ATTGCTTTTATTATACAGGA+TGG | - | tig0028674:12068-12087 | Msa1438970:intron | 25.0% |
| !!! | CGAATGAACTTTAAAATTGA+CGG | - | tig0028674:12633-12652 | Msa1438970:three_prime_UTR | 25.0% |
| ! | TAAGAGATCAAGGATAAATT+GGG | + | tig0028674:12810-12829 | None:intergenic | 25.0% |
| ! | ATAAGAGATCAAGGATAAAT+TGG | + | tig0028674:12811-12830 | None:intergenic | 25.0% |
| !! | AAGAATATATTTTCACACCT+AGG | + | tig0028674:12867-12886 | None:intergenic | 25.0% |
| !!! | ACTATTTTGGTCATATATCT+AGG | + | tig0028674:12966-12985 | None:intergenic | 25.0% |
| ! | TGAGGAATTGATCAAAAATA+TGG | - | tig0028674:13069-13088 | Msa1438970:intron | 25.0% |
| !! | AGACTTTTGAATTGAATATG+TGG | + | tig0028674:13176-13195 | None:intergenic | 25.0% |
| !! | ATATGATTTGTAAGTTTGGT+AGG | + | tig0028674:13345-13364 | None:intergenic | 25.0% |
| !! | ACACATATGATTTGTAAGTT+TGG | + | tig0028674:13349-13368 | None:intergenic | 25.0% |
| ! | ATATAGATTTGAAGATTGAG+AGG | - | tig0028674:13413-13432 | Msa1438970:intron | 25.0% |
| !!! | TCCATTGTTTTTGTTTCTTA+TGG | + | tig0028674:13439-13458 | None:intergenic | 25.0% |
| ! | TGACTTGAATTATGAATCAA+TGG | + | tig0028674:13650-13669 | None:intergenic | 25.0% |
| ! | TGAATCTTGAGTTAATTACA+AGG | - | tig0028674:13842-13861 | Msa1438970:intron | 25.0% |
| ! | CTAAATTATCATCCAAACAA+TGG | + | tig0028674:14150-14169 | None:intergenic | 25.0% |
| ! | AATTTGGAAATTGAAAGTAG+GGG | + | tig0028674:14363-14382 | None:intergenic | 25.0% |
| ! | CAAATTTGGAAATTGAAAGT+AGG | + | tig0028674:14365-14384 | None:intergenic | 25.0% |
| ! | CTACTTTCAATTTCCAAATT+TGG | - | tig0028674:14363-14382 | Msa1438970:intron | 25.0% |
| !!! | TAAATTTTTTGGGCCAAATT+TGG | + | tig0028674:14379-14398 | None:intergenic | 25.0% |
| ! | GCCCAATATTAAACAAAATA+TGG | + | tig0028674:14660-14679 | None:intergenic | 25.0% |
| ! | CACTCTTTATAAACTCATTT+CGG | - | tig0028674:14722-14741 | Msa1438970:intron | 25.0% |
| ! | ACTCTTTATAAACTCATTTC+GGG | - | tig0028674:14723-14742 | Msa1438970:intron | 25.0% |
| !!! | GCATTATCTCTATTTTTTGT+GGG | - | tig0028674:14745-14764 | Msa1438970:intron | 25.0% |
| !! | ATTTTCAATATAGTCTGACT+TGG | - | tig0028674:15233-15252 | Msa1438970:intron | 25.0% |
| ! | TTAGACAATAGTTTCTCAAT+CGG | - | tig0028674:15299-15318 | Msa1438970:intron | 25.0% |
| ! | ATTTGTGTGTTTAATGTTCT+TGG | - | tig0028674:15324-15343 | Msa1438970:intron | 25.0% |
| ! | TCGTAAAACAGTAACATTAA+TGG | - | tig0028674:15367-15386 | Msa1438970:intron | 25.0% |
| ! | CGTAAAACAGTAACATTAAT+GGG | - | tig0028674:15368-15387 | Msa1438970:intron | 25.0% |
| ! | GTAAAACAGTAACATTAATG+GGG | - | tig0028674:15369-15388 | Msa1438970:intron | 25.0% |
| ! | AATTCCAAATTACAGATTGT+TGG | + | tig0028674:15526-15545 | None:intergenic | 25.0% |
| ! | ATTACTCGTTTAATAGTACT+TGG | - | tig0028674:15543-15562 | Msa1438970:intron | 25.0% |
| ! | CTTTATCGAGATCAAAATAT+TGG | + | tig0028674:15784-15803 | None:intergenic | 25.0% |
| ! | TCAAAGTAATCAAAGAAATC+AGG | + | tig0028674:16238-16257 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | - | tig0028674:16816-16835 | Msa1438970:intron | 25.0% |
| !!! | ATCAACGATAGATTCTTTTT+TGG | + | tig0028674:16867-16886 | None:intergenic | 25.0% |
| !!! | CCTAGAGCTATAATTTTTTT+TGG | + | tig0028674:17117-17136 | None:intergenic | 25.0% |
| ! | CCAAAAAAAATTATAGCTCT+AGG | - | tig0028674:17114-17133 | Msa1438970:intron | 25.0% |
| ! | GCATTGAAATTGATGTAAAT+AGG | + | tig0028674:17456-17475 | None:intergenic | 25.0% |
| ! | AAAAATTAAGGATATGCCTT+CGG | + | tig0028674:17705-17724 | None:intergenic | 25.0% |
| ! | AGATTAAAAGAGAATCACAA+AGG | - | tig0028674:17977-17996 | Msa1438970:intron | 25.0% |
| ! | CATTACATGATTATATGTGT+AGG | - | tig0028674:18089-18108 | Msa1438970:intron | 25.0% |
| ! | TATATTTGAACAGTTCTTGT+CGG | - | tig0028674:18211-18230 | Msa1438970:intron | 25.0% |
| ! | ATGGAAAATACTCATATACT+AGG | + | tig0028674:18289-18308 | None:intergenic | 25.0% |
| !! | AAATCGAAGTACTTCTAAAA+GGG | + | tig0028674:18313-18332 | None:intergenic | 25.0% |
| !! | AAAATCGAAGTACTTCTAAA+AGG | + | tig0028674:18314-18333 | None:intergenic | 25.0% |
| ! | AGAATGATGTTATATTACTG+TGG | - | tig0028674:18452-18471 | Msa1438970:intron | 25.0% |
| !!! | AAATTTTGTTTTTCCCTTTC+AGG | - | tig0028674:18585-18604 | Msa1438970:intron | 25.0% |
| ! | ATAACATATTTGTCCTGAAA+GGG | + | tig0028674:18601-18620 | None:intergenic | 25.0% |
| ! | TATAACATATTTGTCCTGAA+AGG | + | tig0028674:18602-18621 | None:intergenic | 25.0% |
| ! | GTATAAAGTATAAAGATCAG+TGG | - | tig0028674:18707-18726 | Msa1438970:CDS | 25.0% |
| ! | AATTTGGTATATTTCAAGAG+TGG | - | tig0028674:18752-18771 | Msa1438970:intron | 25.0% |
| ! | TTGATCTCTACAAAATACAT+GGG | + | tig0028674:19199-19218 | None:intergenic | 25.0% |
| ! | TTGATCTTTACAAGATACAT+GGG | + | tig0028674:19267-19286 | None:intergenic | 25.0% |
| ! | TTTGATCTTTACAAGATACA+TGG | + | tig0028674:19268-19287 | None:intergenic | 25.0% |
| !! | AAGATCAAAATTTTGTCTTG+TGG | - | tig0028674:19279-19298 | Msa1438970:intron | 25.0% |
| !!! | TTTTTCAGAGTTATACATTG+CGG | + | tig0028674:19446-19465 | None:intergenic | 25.0% |
| ! | AAGCTAAATGTTATAAAGCT+AGG | + | tig0028674:19491-19510 | None:intergenic | 25.0% |
| !! | CGAAATTTTGGTGTGATTTT+CGG | - | tig0028674:11071-11090 | Msa1438970:three_prime_UTR | 30.0% |
| TATGCAAAGCAAAGCAAATA+TGG | + | tig0028674:11310-11329 | None:intergenic | 30.0% | |
| TAATCTGATCAATGAGTGAT+CGG | + | tig0028674:11399-11418 | None:intergenic | 30.0% | |
| TTTCAGGAAAAGATGTACAA+AGG | - | tig0028674:11612-11631 | Msa1438970:intron | 30.0% | |
| AGGAGTAACGTAAAGAAAAT+AGG | + | tig0028674:11843-11862 | None:intergenic | 30.0% | |
| AAATTCAGACGTCAAAAGTA+AGG | - | tig0028674:12094-12113 | Msa1438970:intron | 30.0% | |
| TGTATTCACCTTACTTTCAA+AGG | - | tig0028674:12188-12207 | Msa1438970:intron | 30.0% | |
| ! | AGTAATAGCCTTTGAAAGTA+AGG | + | tig0028674:12199-12218 | None:intergenic | 30.0% |
| TTAATTAAATGTGCTCGAGT+AGG | - | tig0028674:12339-12358 | Msa1438970:intron | 30.0% | |
| TATCTATCAATCTCACTTGA+GGG | + | tig0028674:12407-12426 | None:intergenic | 30.0% | |
| ! | GGGCTTTATAAAGAATATGA+TGG | + | tig0028674:12532-12551 | None:intergenic | 30.0% |
| TATTCTTTATAAAGCCCTTC+AGG | - | tig0028674:12535-12554 | Msa1438970:three_prime_UTR | 30.0% | |
| GATTAGATGTTATTCCTGAA+GGG | + | tig0028674:12552-12571 | None:intergenic | 30.0% | |
| AATAACATCTAATCCTCTCA+AGG | - | tig0028674:12558-12577 | Msa1438970:three_prime_UTR | 30.0% | |
| TCATAAATGCAATACAAGCT+AGG | + | tig0028674:12664-12683 | None:intergenic | 30.0% | |
| AGCTTGTATTGCATTTATGA+TGG | - | tig0028674:12664-12683 | Msa1438970:three_prime_UTR | 30.0% | |
| GCTTGTATTGCATTTATGAT+GGG | - | tig0028674:12665-12684 | Msa1438970:three_prime_UTR | 30.0% | |
| ! | ATCGACATAATTGTGGATTT+TGG | - | tig0028674:12717-12736 | Msa1438970:three_prime_UTR | 30.0% |
| !! | AAGTCTTCTAAGGACTATTT+TGG | + | tig0028674:12979-12998 | None:intergenic | 30.0% |
| AAAATAGTCCTTAGAAGACT+TGG | - | tig0028674:12978-12997 | Msa1438970:intron | 30.0% | |
| CTCATATCTCTTAGATTAAG+GGG | + | tig0028674:13053-13072 | None:intergenic | 30.0% | |
| CCTCATATCTCTTAGATTAA+GGG | + | tig0028674:13054-13073 | None:intergenic | 30.0% | |
| TCCTCATATCTCTTAGATTA+AGG | + | tig0028674:13055-13074 | None:intergenic | 30.0% | |
| AATATGTGGAAATACTTGTG+GGG | + | tig0028674:13162-13181 | None:intergenic | 30.0% | |
| GAATATGTGGAAATACTTGT+GGG | + | tig0028674:13163-13182 | None:intergenic | 30.0% | |
| TGAATATGTGGAAATACTTG+TGG | + | tig0028674:13164-13183 | None:intergenic | 30.0% | |
| GCCATAAGAAACAAAAACAA+TGG | - | tig0028674:13435-13454 | Msa1438970:intron | 30.0% | |
| ATAAAAGGCAATTACACTCA+TGG | + | tig0028674:13567-13586 | None:intergenic | 30.0% | |
| TTATGAATCAATGGCATATC+AGG | + | tig0028674:13641-13660 | None:intergenic | 30.0% | |
| GTTCTCTCAAATCTAATAGT+GGG | + | tig0028674:13785-13804 | None:intergenic | 30.0% | |
| AGTTCTCTCAAATCTAATAG+TGG | + | tig0028674:13786-13805 | None:intergenic | 30.0% | |
| TGTAAGTGAATTCCATTGTT+TGG | - | tig0028674:14135-14154 | Msa1438970:intron | 30.0% | |
| !! | GCAAAATTTTGGAAAATGTG+AGG | + | tig0028674:14301-14320 | None:intergenic | 30.0% |
| GAGTTAGTATCATTAGAATC+AGG | - | tig0028674:14598-14617 | Msa1438970:intron | 30.0% | |
| !!! | GGCATTATCTCTATTTTTTG+TGG | - | tig0028674:14744-14763 | Msa1438970:intron | 30.0% |
| TTCCATATTCAAGTAGAACT+CGG | - | tig0028674:14908-14927 | Msa1438970:intron | 30.0% | |
| ATGTTACAGTAAAATGTGCA+AGG | - | tig0028674:15050-15069 | Msa1438970:intron | 30.0% | |
| ATGTTACACTAAAACGTGTA+AGG | - | tig0028674:15179-15198 | Msa1438970:intron | 30.0% | |
| ATGCAAAAATTGTTCAACAG+TGG | + | tig0028674:15262-15281 | None:intergenic | 30.0% | |
| ! | TGTTACTGTTTTACGAAGAT+TGG | + | tig0028674:15363-15382 | None:intergenic | 30.0% |
| ATACATATGTGAACACAAGT+TGG | + | tig0028674:15400-15419 | None:intergenic | 30.0% | |
| !!! | GAAATAGCATTGTGTCATTT+TGG | + | tig0028674:15442-15461 | None:intergenic | 30.0% |
| GTTTAATAGTACTTGGATTG+AGG | - | tig0028674:15550-15569 | Msa1438970:intron | 30.0% | |
| GATGAGTAATTCAAATTCAG+TGG | - | tig0028674:15589-15608 | Msa1438970:intron | 30.0% | |
| !!! | CCTAAAATCTAGTTTTCAAG+GGG | + | tig0028674:15707-15726 | None:intergenic | 30.0% |
| !!! | GCCTAAAATCTAGTTTTCAA+GGG | + | tig0028674:15708-15727 | None:intergenic | 30.0% |
| TTTCAATAATCTGTGATGCA+TGG | - | tig0028674:15813-15832 | Msa1438970:intron | 30.0% | |
| TTTCAAATAGAGGACACAAA+GGG | + | tig0028674:15997-16016 | None:intergenic | 30.0% | |
| ! | TTTTCAAATAGAGGACACAA+AGG | + | tig0028674:15998-16017 | None:intergenic | 30.0% |
| !!! | AGGAGTATCTTTTCAAATAG+AGG | + | tig0028674:16007-16026 | None:intergenic | 30.0% |
| ! | GGGTTAATTAATACCTTTTC+AGG | - | tig0028674:16033-16052 | Msa1438970:intron | 30.0% |
| CTATCACTGCTGAAAATATA+TGG | - | tig0028674:16164-16183 | Msa1438970:intron | 30.0% | |
| !! | CTTTGATTACTTTGAAGCTA+TGG | - | tig0028674:16243-16262 | Msa1438970:intron | 30.0% |
| GTAATAGAATCTATCGTTGA+TGG | - | tig0028674:16765-16784 | Msa1438970:intron | 30.0% | |
| GCATAAAAATATGCAAGGTT+CGG | - | tig0028674:16821-16840 | Msa1438970:intron | 30.0% | |
| CATAAAAATATGCAAGGTTC+GGG | - | tig0028674:16822-16841 | Msa1438970:intron | 30.0% | |
| ATAAAAATATGCAAGGTTCG+GGG | - | tig0028674:16823-16842 | Msa1438970:intron | 30.0% | |
| !!! | GATAGATTCTTTTTTGGTAG+TGG | + | tig0028674:16861-16880 | None:intergenic | 30.0% |
| TTAGTGGAAAAGACTTATGT+GGG | + | tig0028674:17140-17159 | None:intergenic | 30.0% | |
| !! | GTAATATTAGTTTGCATGAC+AGG | - | tig0028674:17373-17392 | Msa1438970:intron | 30.0% |
| CCACACATTGTAATATTTAG+GGG | + | tig0028674:17551-17570 | None:intergenic | 30.0% | |
| CCCACACATTGTAATATTTA+GGG | + | tig0028674:17552-17571 | None:intergenic | 30.0% | |
| CCCTAAATATTACAATGTGT+GGG | - | tig0028674:17549-17568 | Msa1438970:intron | 30.0% | |
| ACCCACACATTGTAATATTT+AGG | + | tig0028674:17553-17572 | None:intergenic | 30.0% | |
| TGTTTGCGACATTTGTTTAT+GGG | - | tig0028674:17750-17769 | Msa1438970:intron | 30.0% | |
| TTATATGTTCTGCATACTTC+GGG | + | tig0028674:18019-18038 | None:intergenic | 30.0% | |
| GTTATATGTTCTGCATACTT+CGG | + | tig0028674:18020-18039 | None:intergenic | 30.0% | |
| GTATGCAGAACATATAACTT+TGG | - | tig0028674:18022-18041 | Msa1438970:intron | 30.0% | |
| !!! | AGAAGTACTTCGATTTTTAC+AGG | - | tig0028674:18317-18336 | Msa1438970:intron | 30.0% |
| !! | GAAGTACTTCGATTTTTACA+GGG | - | tig0028674:18318-18337 | Msa1438970:intron | 30.0% |
| ! | TATTACTGTGGATTGAATGA+AGG | - | tig0028674:18464-18483 | Msa1438970:intron | 30.0% |
| GAAAACATTGCTCAACAATT+TGG | - | tig0028674:18736-18755 | Msa1438970:CDS | 30.0% | |
| CTTGATCTCTACAAAATACA+TGG | + | tig0028674:19200-19219 | None:intergenic | 30.0% | |
| TATCTATACTACGGATAGAA+AGG | - | tig0028674:19351-19370 | Msa1438970:intron | 30.0% | |
| AAGAAATGCACATCGAATAA+AGG | + | tig0028674:19398-19417 | None:intergenic | 30.0% | |
| ! | TTTGGGAAATGGCGAAATTT+TGG | - | tig0028674:11059-11078 | Msa1438970:three_prime_UTR | 35.0% |
| TTCTCGACTTACAACAAGAA+AGG | - | tig0028674:11437-11456 | Msa1438970:three_prime_UTR | 35.0% | |
| CTTGAACAAGAGACTTGATT+TGG | + | tig0028674:11486-11505 | None:intergenic | 35.0% | |
| ! | TTCTCCATCCTCAACTTTTT+AGG | - | tig0028674:11725-11744 | Msa1438970:intron | 35.0% |
| GGCTATTACTTGTCTTCTTA+TGG | - | tig0028674:12209-12228 | Msa1438970:intron | 35.0% | |
| TAAACAGTAGAGTAGTGTAG+AGG | - | tig0028674:12312-12331 | Msa1438970:intron | 35.0% | |
| !! | AGGACTTGTTGTTTAGTTGT+AGG | - | tig0028674:12359-12378 | Msa1438970:intron | 35.0% |
| GTATCTATCAATCTCACTTG+AGG | + | tig0028674:12408-12427 | None:intergenic | 35.0% | |
| TCTTCTTCAGCCATGTAAAA+CGG | - | tig0028674:12493-12512 | Msa1438970:three_prime_UTR | 35.0% | |
| !! | CAAATTCAAGCCGTTTTACA+TGG | + | tig0028674:12506-12525 | None:intergenic | 35.0% |
| GGATTAGATGTTATTCCTGA+AGG | + | tig0028674:12553-12572 | None:intergenic | 35.0% | |
| AAAACATGTTTCACCTTGAG+AGG | + | tig0028674:12574-12593 | None:intergenic | 35.0% | |
| CATTCGTCGTGTAAAAACAT+TGG | + | tig0028674:12619-12638 | None:intergenic | 35.0% | |
| ! | GTATTGCATTTATGATGGGA+AGG | - | tig0028674:12669-12688 | Msa1438970:three_prime_UTR | 35.0% |
| !! | TTTGAGCATCGACATAATTG+TGG | - | tig0028674:12710-12729 | Msa1438970:three_prime_UTR | 35.0% |
| AAAATCCAGCTAAAGAGGTT+TGG | + | tig0028674:12778-12797 | None:intergenic | 35.0% | |
| ! | AAACCTCTTTAGCTGGATTT+TGG | - | tig0028674:12777-12796 | Msa1438970:exon | 35.0% |
| ! | AACCTCTTTAGCTGGATTTT+GGG | - | tig0028674:12778-12797 | Msa1438970:exon | 35.0% |
| AAATGCGTGATAAGAGATCA+AGG | + | tig0028674:12820-12839 | None:intergenic | 35.0% | |
| ! | TATATTTTCACACCTAGGAC+TGG | + | tig0028674:12862-12881 | None:intergenic | 35.0% |
| AAAAGCTAGCTCAAAAGGTA+AGG | + | tig0028674:13009-13028 | None:intergenic | 35.0% | |
| CACTAAAAAGCTAGCTCAAA+AGG | + | tig0028674:13014-13033 | None:intergenic | 35.0% | |
| CCCTTAATCTAAGAGATATG+AGG | - | tig0028674:13051-13070 | Msa1438970:intron | 35.0% | |
| ATATGTGGAAATACTTGTGG+GGG | + | tig0028674:13161-13180 | None:intergenic | 35.0% | |
| GAGGAAAGAAAGAGTAGTAA+GGG | + | tig0028674:13200-13219 | None:intergenic | 35.0% | |
| AGAGGAAAGAAAGAGTAGTA+AGG | + | tig0028674:13201-13220 | None:intergenic | 35.0% | |
| TTATCCTAGACTCTCTATCA+AGG | - | tig0028674:13234-13253 | Msa1438970:intron | 35.0% | |
| ! | TAATTGCATTTTTGCCCTTC+TGG | + | tig0028674:13497-13516 | None:intergenic | 35.0% |
| CACGAAATGGAGAATCAAAT+GGG | + | tig0028674:13679-13698 | None:intergenic | 35.0% | |
| GATGTAACCAACTCAAATGT+TGG | + | tig0028674:13922-13941 | None:intergenic | 35.0% | |
| !! | ACATTTGAGTTGGTTACATC+TGG | - | tig0028674:13922-13941 | Msa1438970:intron | 35.0% |
| ! | TATTCTCTTAAGAGCGTGTT+TGG | - | tig0028674:14080-14099 | Msa1438970:CDS | 35.0% |
| ! | TTGGATGTAGGAATGTTTTG+AGG | - | tig0028674:14099-14118 | Msa1438970:intron | 35.0% |
| !! | TGGATGTAGGAATGTTTTGA+GGG | - | tig0028674:14100-14119 | Msa1438970:intron | 35.0% |
| ! | GGGGTCAATTTGCAAAATTT+TGG | + | tig0028674:14312-14331 | None:intergenic | 35.0% |
| !! | ATTTAGCTTTAGAGCGTGTT+TGG | + | tig0028674:14547-14566 | None:intergenic | 35.0% |
| ATCATTAGAATCAGGCATAC+TGG | - | tig0028674:14606-14625 | Msa1438970:intron | 35.0% | |
| !!! | TCTCTATTTTTTGTGGGACT+TGG | - | tig0028674:14751-14770 | Msa1438970:intron | 35.0% |
| !!! | CTCTATTTTTTGTGGGACTT+GGG | - | tig0028674:14752-14771 | Msa1438970:intron | 35.0% |
| TGGTGTGTGGATATAAATAG+TGG | - | tig0028674:14814-14833 | Msa1438970:intron | 35.0% | |
| !! | AAATAGTGGATGACCCTAAA+TGG | - | tig0028674:14828-14847 | Msa1438970:intron | 35.0% |
| !! | GAACCTCTAAGATCCATTTA+GGG | + | tig0028674:14844-14863 | None:intergenic | 35.0% |
| !! | TGAACCTCTAAGATCCATTT+AGG | + | tig0028674:14845-14864 | None:intergenic | 35.0% |
| ! | AGTCTTGTATCCCTAGAAAT+CGG | - | tig0028674:14931-14950 | Msa1438970:intron | 35.0% |
| AGCACCAACAATCTGTAATT+TGG | - | tig0028674:15519-15538 | Msa1438970:intron | 35.0% | |
| ATTCAAATTCAGTGGCATAG+TGG | - | tig0028674:15597-15616 | Msa1438970:intron | 35.0% | |
| ! | GTCAAGTAGTATGGGATTTT+TGG | - | tig0028674:15655-15674 | Msa1438970:intron | 35.0% |
| !! | AAGTAGTATGGGATTTTTGG+TGG | - | tig0028674:15658-15677 | Msa1438970:intron | 35.0% |
| ! | CCCCTTGAAAACTAGATTTT+AGG | - | tig0028674:15704-15723 | Msa1438970:intron | 35.0% |
| !!! | CGCCTAAAATCTAGTTTTCA+AGG | + | tig0028674:15709-15728 | None:intergenic | 35.0% |
| ! | TGAAAACTAGATTTTAGGCG+AGG | - | tig0028674:15709-15728 | Msa1438970:intron | 35.0% |
| ! | GAAAACTAGATTTTAGGCGA+GGG | - | tig0028674:15710-15729 | Msa1438970:intron | 35.0% |
| TAGTAAGCAATTAACTCTCC+TGG | + | tig0028674:15941-15960 | None:intergenic | 35.0% | |
| TTGAAAAGATACTCCTCAAG+AGG | - | tig0028674:16011-16030 | Msa1438970:intron | 35.0% | |
| TGAAAAGATACTCCTCAAGA+GGG | - | tig0028674:16012-16031 | Msa1438970:intron | 35.0% | |
| GTATTAATTAACCCCTCTTG+AGG | + | tig0028674:16027-16046 | None:intergenic | 35.0% | |
| !!! | CTTTTCAGGTCATTACAAGT+GGG | - | tig0028674:16047-16066 | Msa1438970:intron | 35.0% |
| ATCATTCTCGAAGGTGAAAT+GGG | - | tig0028674:16111-16130 | Msa1438970:intron | 35.0% | |
| ! | ATTTTCAGCAGTGATAGAAG+AGG | + | tig0028674:16161-16180 | None:intergenic | 35.0% |
| ACACATACTTATCCTTGTCA+AGG | + | tig0028674:16276-16295 | None:intergenic | 35.0% | |
| AGGATAAGTATGTGTTCAAG+AGG | - | tig0028674:16281-16300 | Msa1438970:intron | 35.0% | |
| ATAAGTATGTGTTCAAGAGG+AGG | - | tig0028674:16284-16303 | Msa1438970:intron | 35.0% | |
| TAAGTATGTGTTCAAGAGGA+GGG | - | tig0028674:16285-16304 | Msa1438970:intron | 35.0% | |
| TATCCATTCTAGGTCCATTA+TGG | - | tig0028674:16383-16402 | Msa1438970:intron | 35.0% | |
| GTTTCGTCATGGAATGATAA+TGG | - | tig0028674:16408-16427 | Msa1438970:intron | 35.0% | |
| ATGATCCATGTAAGTTCAGT+CGG | - | tig0028674:16448-16467 | Msa1438970:intron | 35.0% | |
| ! | ATAACTTGTGATCGCCAAAT+TGG | - | tig0028674:16482-16501 | Msa1438970:intron | 35.0% |
| TTGCATATCCCTAACCAATT+TGG | + | tig0028674:16499-16518 | None:intergenic | 35.0% | |
| TTAAGAGTTGTATCTGCGTT+CGG | + | tig0028674:16599-16618 | None:intergenic | 35.0% | |
| ACGCAGATACAACTCTTAAA+TGG | - | tig0028674:16600-16619 | Msa1438970:intron | 35.0% | |
| !!! | ATTCTTTTTTGGTAGTGGCT+GGG | + | tig0028674:16856-16875 | None:intergenic | 35.0% |
| GTTTGTAAGAACCTACTCAA+GGG | - | tig0028674:16971-16990 | Msa1438970:intron | 35.0% | |
| ! | TTACAATTTTGCCCTTGAGT+AGG | + | tig0028674:16985-17004 | None:intergenic | 35.0% |
| GTTAGTGGAAAAGACTTATG+TGG | + | tig0028674:17141-17160 | None:intergenic | 35.0% | |
| TTATGTTGAAGGAGAAGACT+AGG | + | tig0028674:17174-17193 | None:intergenic | 35.0% | |
| CATTTACCTTGAGACTACTT+AGG | + | tig0028674:17505-17524 | None:intergenic | 35.0% | |
| CCCCTAAATATTACAATGTG+TGG | - | tig0028674:17548-17567 | Msa1438970:intron | 35.0% | |
| GTCGCAAACACAAACAATAA+TGG | + | tig0028674:17740-17759 | None:intergenic | 35.0% | |
| GTGTTTGCGACATTTGTTTA+TGG | - | tig0028674:17749-17768 | Msa1438970:intron | 35.0% | |
| GTTTGCGACATTTGTTTATG+GGG | - | tig0028674:17751-17770 | Msa1438970:intron | 35.0% | |
| AATTCCAGTTTAGGAACTGT+TGG | - | tig0028674:17777-17796 | Msa1438970:intron | 35.0% | |
| TACTCCTTCATGGTATATAG+TGG | + | tig0028674:17805-17824 | None:intergenic | 35.0% | |
| TTTGACAAAACTTCACCTAC+TGG | - | tig0028674:17942-17961 | Msa1438970:intron | 35.0% | |
| TTGACAAAACTTCACCTACT+GGG | - | tig0028674:17943-17962 | Msa1438970:intron | 35.0% | |
| TATATGTGTAGGAACTTCAC+AGG | - | tig0028674:18100-18119 | Msa1438970:intron | 35.0% | |
| !! | ATTTTTACAGGGCTCTAGTT+TGG | - | tig0028674:18329-18348 | Msa1438970:intron | 35.0% |
| !! | TTTTTACAGGGCTCTAGTTT+GGG | - | tig0028674:18330-18349 | Msa1438970:intron | 35.0% |
| ATAAAGCATGTATAGCTACC+TGG | + | tig0028674:18401-18420 | None:intergenic | 35.0% | |
| ! | AATGGACTTGAGCTATTTGT+TGG | - | tig0028674:18500-18519 | Msa1438970:intron | 35.0% |
| TGTGTAACAAAATGATGCTG+TGG | - | tig0028674:18557-18576 | Msa1438970:CDS | 35.0% | |
| AAAAAAGCTAAACCTGTCTC+TGG | - | tig0028674:18640-18659 | Msa1438970:intron | 35.0% | |
| TGGTATATTTCAAGAGTGGA+AGG | - | tig0028674:18756-18775 | Msa1438970:intron | 35.0% | |
| TAGTTTACTCGTCAACTAGA+TGG | + | tig0028674:18813-18832 | None:intergenic | 35.0% | |
| TCTACACACGAGAAGAAAAA+GGG | + | tig0028674:18856-18875 | None:intergenic | 35.0% | |
| ATCTACACACGAGAAGAAAA+AGG | + | tig0028674:18857-18876 | None:intergenic | 35.0% | |
| GAAGTAGCTTCAAAGATTCT+GGG | + | tig0028674:19002-19021 | None:intergenic | 35.0% | |
| TGAAGTAGCTTCAAAGATTC+TGG | + | tig0028674:19003-19022 | None:intergenic | 35.0% | |
| CTGAAAACAACAACTCTCTT+GGG | + | tig0028674:19072-19091 | None:intergenic | 35.0% | |
| TCTGAAAACAACAACTCTCT+TGG | + | tig0028674:19073-19092 | None:intergenic | 35.0% | |
| ACATCATAGTCTCTTTAGCT+CGG | + | tig0028674:19121-19140 | None:intergenic | 35.0% | |
| ! | TATGATGTGGTTGAAAGTGT+AGG | - | tig0028674:19133-19152 | Msa1438970:intron | 35.0% |
| TCTCTACAAAATACATGGGA+TGG | + | tig0028674:19195-19214 | None:intergenic | 35.0% | |
| ! | GAGATCAAGATTTTGTCTTG+TGG | - | tig0028674:19211-19230 | Msa1438970:intron | 35.0% |
| TCTTTACAAGATACATGGGA+TGG | + | tig0028674:19263-19282 | None:intergenic | 35.0% | |
| AGATATTATCTTCTACCCCA+AGG | + | tig0028674:19336-19355 | None:intergenic | 35.0% | |
| ! | TTTGGTGGTTACGAAGAAGA+AGG | - | tig0028674:11001-11020 | Msa1438970:three_prime_UTR | 40.0% |
| AACGAAACGAAACGAAACGA+AGG | + | tig0028674:11200-11219 | None:intergenic | 40.0% | |
| TTGCGAAAAGTCTCATCTGA+AGG | + | tig0028674:11224-11243 | None:intergenic | 40.0% | |
| AATTACATACAGCAACAGCG+AGG | + | tig0028674:11269-11288 | None:intergenic | 40.0% | |
| !! | GATCAGATTAGCTTGCAACA+AGG | - | tig0028674:11409-11428 | Msa1438970:three_prime_UTR | 40.0% |
| AAGGCTGATTGATAAAGTCC+AGG | - | tig0028674:11631-11650 | Msa1438970:intron | 40.0% | |
| GGAACCTAAAAAGTTGAGGA+TGG | + | tig0028674:11732-11751 | None:intergenic | 40.0% | |
| CACTGGAACCTAAAAAGTTG+AGG | + | tig0028674:11736-11755 | None:intergenic | 40.0% | |
| !!! | CTCAACTTTTTAGGTTCCAG+TGG | - | tig0028674:11734-11753 | Msa1438970:three_prime_UTR | 40.0% |
| !! | ATGTAATCGTGCTGATTACC+TGG | - | tig0028674:11776-11795 | Msa1438970:three_prime_UTR | 40.0% |
| ! | ACAAAAGCTTGTGCTGGTAA+AGG | + | tig0028674:12277-12296 | None:intergenic | 40.0% |
| CTTTCAACAAAAGCTTGTGC+TGG | + | tig0028674:12283-12302 | None:intergenic | 40.0% | |
| GTAGGACACAATAATACCGT+TGG | - | tig0028674:12377-12396 | Msa1438970:intron | 40.0% | |
| AACATCCAAACCTCTTTAGC+TGG | - | tig0028674:12770-12789 | Msa1438970:exon | 40.0% | |
| AAGACTAAACATCAGGAGAG+TGG | + | tig0028674:12910-12929 | None:intergenic | 40.0% | |
| ACTCTCCTGATGTTTAGTCT+TGG | - | tig0028674:12909-12928 | Msa1438970:intron | 40.0% | |
| ! | CTCTCCTGATGTTTAGTCTT+GGG | - | tig0028674:12910-12929 | Msa1438970:intron | 40.0% |
| AGGATTGTCCAAGTCTTCTA+AGG | + | tig0028674:12989-13008 | None:intergenic | 40.0% | |
| !! | TAGCTTTTTAGTGCCGAGTT+AGG | - | tig0028674:13021-13040 | Msa1438970:intron | 40.0% |
| TAAGGGGTTTATGCCTAACT+CGG | + | tig0028674:13037-13056 | None:intergenic | 40.0% | |
| CAGGTTCTCATGTATAACGT+GGG | + | tig0028674:13134-13153 | None:intergenic | 40.0% | |
| ACTACCTTGATAGAGAGTCT+AGG | + | tig0028674:13241-13260 | None:intergenic | 40.0% | |
| GGGTTACAAGATCGTGAATA+GGG | - | tig0028674:13295-13314 | Msa1438970:intron | 40.0% | |
| GGTTACAAGATCGTGAATAG+GGG | - | tig0028674:13296-13315 | Msa1438970:intron | 40.0% | |
| GTTACAAGATCGTGAATAGG+GGG | - | tig0028674:13297-13316 | Msa1438970:intron | 40.0% | |
| ! | CTGGTTCATTTGCTAGCATA+TGG | + | tig0028674:13478-13497 | None:intergenic | 40.0% |
| ATGCTAGCAAATGAACCAGA+AGG | - | tig0028674:13479-13498 | Msa1438970:intron | 40.0% | |
| TGCTAGCAAATGAACCAGAA+GGG | - | tig0028674:13480-13499 | Msa1438970:intron | 40.0% | |
| GCACGAAATGGAGAATCAAA+TGG | + | tig0028674:13680-13699 | None:intergenic | 40.0% | |
| ACCTACACCAACATTTGAGT+TGG | - | tig0028674:13912-13931 | Msa1438970:intron | 40.0% | |
| ACCAACTCAAATGTTGGTGT+AGG | + | tig0028674:13916-13935 | None:intergenic | 40.0% | |
| TTGCAAGCTATCCTAACAAC+TGG | - | tig0028674:14009-14028 | Msa1438970:intron | 40.0% | |
| TAGTGTTTGTGCCAGTTGTT+AGG | + | tig0028674:14023-14042 | None:intergenic | 40.0% | |
| ! | TTAAGAGCGTGTTTGGATGT+AGG | - | tig0028674:14087-14106 | Msa1438970:CDS | 40.0% |
| !! | ACACGCTCTAAAGCTAAATC+TGG | - | tig0028674:14548-14567 | Msa1438970:CDS | 40.0% |
| ! | ACATTTGTGGATTACTCTCC+AGG | + | tig0028674:14633-14652 | None:intergenic | 40.0% |
| CGGTTTAGTAAGGATGAGTT+AGG | + | tig0028674:14682-14701 | None:intergenic | 40.0% | |
| ! | CCTTACAAGTCGGTTTAGTA+AGG | + | tig0028674:14692-14711 | None:intergenic | 40.0% |
| !! | CCTTACTAAACCGACTTGTA+AGG | - | tig0028674:14689-14708 | Msa1438970:intron | 40.0% |
| TGACCCTAAATGGATCTTAG+AGG | - | tig0028674:14838-14857 | Msa1438970:intron | 40.0% | |
| CTCCGAGTTCTACTTGAATA+TGG | + | tig0028674:14913-14932 | None:intergenic | 40.0% | |
| GTCTTGTATCCCTAGAAATC+GGG | - | tig0028674:14932-14951 | Msa1438970:intron | 40.0% | |
| TCTTGTATCCCTAGAAATCG+GGG | - | tig0028674:14933-14952 | Msa1438970:intron | 40.0% | |
| AGATTTCACCCCGATTTCTA+GGG | + | tig0028674:14944-14963 | None:intergenic | 40.0% | |
| AAGATTTCACCCCGATTTCT+AGG | + | tig0028674:14945-14964 | None:intergenic | 40.0% | |
| CTGTAACATGTCGAAGCTAA+AGG | + | tig0028674:15039-15058 | None:intergenic | 40.0% | |
| AAATTCAGTGGCATAGTGGT+AGG | - | tig0028674:15601-15620 | Msa1438970:intron | 40.0% | |
| AATTCAGTGGCATAGTGGTA+GGG | - | tig0028674:15602-15621 | Msa1438970:intron | 40.0% | |
| AATCCCATACTACTTGACGT+GGG | + | tig0028674:15653-15672 | None:intergenic | 40.0% | |
| AAATCCCATACTACTTGACG+TGG | + | tig0028674:15654-15673 | None:intergenic | 40.0% | |
| GGTGGAATACTTAAGAGACT+TGG | - | tig0028674:15676-15695 | Msa1438970:intron | 40.0% | |
| CGAGGGTTTCACAAATTCTT+GGG | - | tig0028674:15727-15746 | Msa1438970:intron | 40.0% | |
| TCTGTGATGCATGGTGAATA+AGG | - | tig0028674:15822-15841 | Msa1438970:intron | 40.0% | |
| GAAAAGATACTCCTCAAGAG+GGG | - | tig0028674:16013-16032 | Msa1438970:intron | 40.0% | |
| CCACTTGTAATGACCTGAAA+AGG | + | tig0028674:16049-16068 | None:intergenic | 40.0% | |
| !!! | CCTTTTCAGGTCATTACAAG+TGG | - | tig0028674:16046-16065 | Msa1438970:intron | 40.0% |
| AACAGAGTCATCATTCTCGA+AGG | - | tig0028674:16102-16121 | Msa1438970:intron | 40.0% | |
| CATCATTCTCGAAGGTGAAA+TGG | - | tig0028674:16110-16129 | Msa1438970:intron | 40.0% | |
| ! | TGTCATCTGAGGTTGGATAA+AGG | + | tig0028674:16204-16223 | None:intergenic | 40.0% |
| TTATCCAACCTCAGATGACA+TGG | - | tig0028674:16204-16223 | Msa1438970:intron | 40.0% | |
| ! | ATTTCCATGTCATCTGAGGT+TGG | + | tig0028674:16211-16230 | None:intergenic | 40.0% |
| !! | TGCTATTTCCATGTCATCTG+AGG | + | tig0028674:16215-16234 | None:intergenic | 40.0% |
| AACAACCGACTGAACTTACA+TGG | + | tig0028674:16456-16475 | None:intergenic | 40.0% | |
| TTGTGATCGCCAAATTGGTT+AGG | - | tig0028674:16487-16506 | Msa1438970:intron | 40.0% | |
| TGTGATCGCCAAATTGGTTA+GGG | - | tig0028674:16488-16507 | Msa1438970:intron | 40.0% | |
| GGTTAGGGATATGCAAGTTA+TGG | - | tig0028674:16503-16522 | Msa1438970:intron | 40.0% | |
| !!! | TTCTTTTTTGGTAGTGGCTG+GGG | + | tig0028674:16855-16874 | None:intergenic | 40.0% |
| !!! | GATTCTTTTTTGGTAGTGGC+TGG | + | tig0028674:16857-16876 | None:intergenic | 40.0% |
| ! | GTTTACGATGCTGACTACAT+TGG | + | tig0028674:16934-16953 | None:intergenic | 40.0% |
| TAAACACGAGGAACGTAACA+CGG | - | tig0028674:16949-16968 | Msa1438970:intron | 40.0% | |
| GGTTTGTAAGAACCTACTCA+AGG | - | tig0028674:16970-16989 | Msa1438970:intron | 40.0% | |
| CTAGGTCTAGGTTAAGTTAG+TGG | + | tig0028674:17156-17175 | None:intergenic | 40.0% | |
| !! | TTGTTTGTTGTTTCCTGCTG+CGG | + | tig0028674:17227-17246 | None:intergenic | 40.0% |
| CAACAAACAAGCAGATCTTG+TGG | - | tig0028674:17237-17256 | Msa1438970:intron | 40.0% | |
| AAACAAGCAGATCTTGTGGT+GGG | - | tig0028674:17241-17260 | Msa1438970:intron | 40.0% | |
| CTGATTGTGTTCAGTTCAGT+TGG | - | tig0028674:17300-17319 | Msa1438970:intron | 40.0% | |
| GGGATGAACTATCACCAAAA+TGG | - | tig0028674:17679-17698 | Msa1438970:intron | 40.0% | |
| ATGGGGAAGAATTCCAGTTT+AGG | - | tig0028674:17768-17787 | Msa1438970:intron | 40.0% | |
| GGTACCACTATATACCATGA+AGG | - | tig0028674:17798-17817 | Msa1438970:intron | 40.0% | |
| GAATGCTTAGTACTCCTTCA+TGG | + | tig0028674:17815-17834 | None:intergenic | 40.0% | |
| AACAGTTCTTGTCGGTACAA+AGG | - | tig0028674:18219-18238 | Msa1438970:intron | 40.0% | |
| ! | GAAGTACTTCTAAAAGGGCA+TGG | + | tig0028674:18308-18327 | None:intergenic | 40.0% |
| TGGACTTCATTCAGCTTGAT+TGG | + | tig0028674:18381-18400 | None:intergenic | 40.0% | |
| AATCAAGCTGAATGAAGTCC+AGG | - | tig0028674:18380-18399 | Msa1438970:CDS | 40.0% | |
| ACTCCTTTATAAGCTGTCCT+AGG | + | tig0028674:18934-18953 | None:intergenic | 40.0% | |
| AACAAGGAATATACGCTTCG+TGG | + | tig0028674:18977-18996 | None:intergenic | 40.0% | |
| ACGAAGCGTATATTCCTTGT+TGG | - | tig0028674:18976-18995 | Msa1438970:intron | 40.0% | |
| GAGCTAAAGAGACTATGATG+TGG | - | tig0028674:19120-19139 | Msa1438970:CDS | 40.0% | |
| ! | TGTGGTTGAAAGTGTAGGTA+CGG | - | tig0028674:19138-19157 | Msa1438970:intron | 40.0% |
| ! | TTTTGTCTTGTGGAGTAGTG+TGG | - | tig0028674:19221-19240 | Msa1438970:intron | 40.0% |
| GATACTGTGATCATAGAGTG+TGG | - | tig0028674:19310-19329 | Msa1438970:intron | 40.0% | |
| ! | AGACGACTGAGCGAGTTTTT+GGG | - | tig0028674:11042-11061 | Msa1438970:three_prime_UTR | 45.0% |
| !! | CTGAGCGAGTTTTTGGGAAA+TGG | - | tig0028674:11048-11067 | Msa1438970:three_prime_UTR | 45.0% |
| TCTTCTCTTTGTTGCAGCCT+TGG | - | tig0028674:11096-11115 | Msa1438970:three_prime_UTR | 45.0% | |
| CTGGATGTAGATGAACACCA+AGG | + | tig0028674:11116-11135 | None:intergenic | 45.0% | |
| !! | CTTGGTGTTCATCTACATCC+AGG | - | tig0028674:11114-11133 | Msa1438970:three_prime_UTR | 45.0% |
| !! | GGTTAAAAGATAGAGGCACC+TGG | + | tig0028674:11135-11154 | None:intergenic | 45.0% |
| ! | CAGAATTGATAGTCCTCTCC+AGG | + | tig0028674:11797-11816 | None:intergenic | 45.0% |
| CTTCTAGGTGTGCAGTTCTT+AGG | - | tig0028674:11970-11989 | Msa1438970:intron | 45.0% | |
| CGATGAGCTATCTCATATGC+AGG | - | tig0028674:12127-12146 | Msa1438970:three_prime_UTR | 45.0% | |
| ! | AAAGCTTGTGCTGGTAAAGG+TGG | + | tig0028674:12274-12293 | None:intergenic | 45.0% |
| !! | AGAAGCGTTACTCCTTGCTA+AGG | + | tig0028674:12476-12495 | None:intergenic | 45.0% |
| !! | ATGGGAAGGTGTTTGCCTTA+GGG | - | tig0028674:12683-12702 | Msa1438970:three_prime_UTR | 45.0% |
| CCCTACATCAGCTAGAGATA+CGG | + | tig0028674:12743-12762 | None:intergenic | 45.0% | |
| CCGTATCTCTAGCTGATGTA+GGG | - | tig0028674:12740-12759 | Msa1438970:three_prime_UTR | 45.0% | |
| GTCCCAAAATCCAGCTAAAG+AGG | + | tig0028674:12783-12802 | None:intergenic | 45.0% | |
| ! | AGGACTGGACATCTAAAGCA+TGG | + | tig0028674:12847-12866 | None:intergenic | 45.0% |
| ! | TGCTTTAGATGTCCAGTCCT+AGG | - | tig0028674:12847-12866 | Msa1438970:CDS | 45.0% |
| ATCAGGAGAGTGGACAAATG+TGG | + | tig0028674:12900-12919 | None:intergenic | 45.0% | |
| CACACCCAAGACTAAACATC+AGG | + | tig0028674:12917-12936 | None:intergenic | 45.0% | |
| !! | TGTTTAGTCTTGGGTGTGAG+AGG | - | tig0028674:12919-12938 | Msa1438970:intron | 45.0% |
| !! | GTTTAGTCTTGGGTGTGAGA+GGG | - | tig0028674:12920-12939 | Msa1438970:intron | 45.0% |
| CCAGGTTCTCATGTATAACG+TGG | + | tig0028674:13135-13154 | None:intergenic | 45.0% | |
| CCACGTTATACATGAGAACC+TGG | - | tig0028674:13132-13151 | Msa1438970:intron | 45.0% | |
| GGGGTTACAAGATCGTGAAT+AGG | - | tig0028674:13294-13313 | Msa1438970:intron | 45.0% | |
| ! | CAAAAGACGAGAGCACGAAA+TGG | + | tig0028674:13692-13711 | None:intergenic | 45.0% |
| GCAACTGTTCTGTCACTGAT+TGG | - | tig0028674:13734-13753 | Msa1438970:intron | 45.0% | |
| !! | TAATAGTGGGCACTGATCAG+AGG | + | tig0028674:13772-13791 | None:intergenic | 45.0% |
| ATCAGCTACATGTAGCTGAC+TGG | + | tig0028674:13868-13887 | None:intergenic | 45.0% | |
| GCTTGTAGTAGAAGATCGCA+TGG | + | tig0028674:13978-13997 | None:intergenic | 45.0% | |
| !! | CTTTAGAGCGTGTTTGGATG+AGG | + | tig0028674:14541-14560 | None:intergenic | 45.0% |
| !! | CTAAACCGACTTGTAAGGTG+AGG | - | tig0028674:14694-14713 | Msa1438970:intron | 45.0% |
| AGACTCCTCACCTTACAAGT+CGG | + | tig0028674:14702-14721 | None:intergenic | 45.0% | |
| ATTCAGTGGCATAGTGGTAG+GGG | - | tig0028674:15603-15622 | Msa1438970:intron | 45.0% | |
| TACTACTTGACGTGGGACTT+GGG | + | tig0028674:15646-15665 | None:intergenic | 45.0% | |
| ATACTACTTGACGTGGGACT+TGG | + | tig0028674:15647-15666 | None:intergenic | 45.0% | |
| AAGTCCCACGTCAAGTAGTA+TGG | - | tig0028674:15646-15665 | Msa1438970:intron | 45.0% | |
| AGTCCCACGTCAAGTAGTAT+GGG | - | tig0028674:15647-15666 | Msa1438970:intron | 45.0% | |
| GCGAGGGTTTCACAAATTCT+TGG | - | tig0028674:15726-15745 | Msa1438970:intron | 45.0% | |
| ! | GCAGCACTTAGATTTTGAGC+CGG | - | tig0028674:15901-15920 | Msa1438970:intron | 45.0% |
| ! | TTGAGCCGGTTCAAACTGAA+AGG | - | tig0028674:15915-15934 | Msa1438970:intron | 45.0% |
| TATGGCAACTCTCCTTGACA+AGG | - | tig0028674:16261-16280 | Msa1438970:intron | 45.0% | |
| !! | CAGCCATAATGGACCTAGAA+TGG | + | tig0028674:16389-16408 | None:intergenic | 45.0% |
| CCATGACGAAACAGCCATAA+TGG | + | tig0028674:16400-16419 | None:intergenic | 45.0% | |
| ! | CCATTATGGCTGTTTCGTCA+TGG | - | tig0028674:16397-16416 | Msa1438970:intron | 45.0% |
| !! | ATCAGGGTAAAGAGTGTCAC+AGG | + | tig0028674:16653-16672 | None:intergenic | 45.0% |
| TAGTCAGCATCGTAAACACG+AGG | - | tig0028674:16937-16956 | Msa1438970:intron | 45.0% | |
| TGAAGGAGAAGACTAGGTCT+AGG | + | tig0028674:17168-17187 | None:intergenic | 45.0% | |
| GTTGCTTAAAGTTGCAGAGG+CGG | + | tig0028674:17201-17220 | None:intergenic | 45.0% | |
| CTGGTTGCTTAAAGTTGCAG+AGG | + | tig0028674:17204-17223 | None:intergenic | 45.0% | |
| CAAACAAGCAGATCTTGTGG+TGG | - | tig0028674:17240-17259 | Msa1438970:intron | 45.0% | |
| AACAAGCAGATCTTGTGGTG+GGG | - | tig0028674:17242-17261 | Msa1438970:intron | 45.0% | |
| CAGTGTTTGTGCCAACTGTT+AGG | - | tig0028674:17324-17343 | Msa1438970:intron | 45.0% | |
| ! | TCACAAGCTAGCCTAACAGT+TGG | + | tig0028674:17338-17357 | None:intergenic | 45.0% |
| ACGCAACCTAAGTAGTCTCA+AGG | - | tig0028674:17496-17515 | Msa1438970:intron | 45.0% | |
| TGCAGACGAACTTTATCGCT+CGG | - | tig0028674:17614-17633 | Msa1438970:intron | 45.0% | |
| ! | ACTTCTTTCCTGGACTAGGA+TGG | - | tig0028674:17637-17656 | Msa1438970:intron | 45.0% |
| ! | GATGCTGGCTAGATCTACAT+GGG | - | tig0028674:17659-17678 | Msa1438970:intron | 45.0% |
| ACTATCACCAAAATGGCCGA+AGG | - | tig0028674:17686-17705 | Msa1438970:intron | 45.0% | |
| GGTACCAACAGTTCCTAAAC+TGG | + | tig0028674:17784-17803 | None:intergenic | 45.0% | |
| ATGTTCTGCATACTTCGGGT+CGG | + | tig0028674:18015-18034 | None:intergenic | 45.0% | |
| TGGATTGAATGAAGGTCGAC+TGG | - | tig0028674:18472-18491 | Msa1438970:intron | 45.0% | |
| ! | GGACTTGAGCTATTTGTTGG+AGG | - | tig0028674:18503-18522 | Msa1438970:intron | 45.0% |
| ! | GCTATTTGTTGGAGGTGAGA+TGG | - | tig0028674:18511-18530 | Msa1438970:intron | 45.0% |
| ! | CAGAAGGCACGCAATATAGA+CGG | - | tig0028674:18676-18695 | Msa1438970:intron | 45.0% |
| ! | TGTTGCTTCTGTTCACTTCC+AGG | - | tig0028674:18900-18919 | Msa1438970:intron | 45.0% |
| GTGCCTAGGACAGCTTATAA+AGG | - | tig0028674:18928-18947 | Msa1438970:intron | 45.0% | |
| TCAAAGATTCTGGGCCAACA+AGG | + | tig0028674:18993-19012 | None:intergenic | 45.0% | |
| TGATCATAGAGTGTGGCCTT+GGG | - | tig0028674:19317-19336 | Msa1438970:intron | 45.0% | |
| !!! | ATTTTTTTTTTTAAATAGTT+AGG | - | tig0028674:16671-16690 | Msa1438970:intron | 5.0% |
| ! | GAGACGACTGAGCGAGTTTT+TGG | - | tig0028674:11041-11060 | Msa1438970:three_prime_UTR | 50.0% |
| GGCTACATTCTTGCTCTCGA+CGG | + | tig0028674:11465-11484 | None:intergenic | 50.0% | |
| CTTTCTTAGTGTGCAGCAGC+AGG | - | tig0028674:11550-11569 | Msa1438970:three_prime_UTR | 50.0% | |
| CAGCAAGCAAGCAAGCAAAC+AGG | + | tig0028674:11672-11691 | None:intergenic | 50.0% | |
| ATGATGACAACAGCTGCCAC+TGG | + | tig0028674:11753-11772 | None:intergenic | 50.0% | |
| AGTGGCAGCTGTTGTCATCA+TGG | - | tig0028674:11752-11771 | Msa1438970:three_prime_UTR | 50.0% | |
| !! | ATCGTGCTGATTACCTGGAG+AGG | - | tig0028674:11781-11800 | Msa1438970:three_prime_UTR | 50.0% |
| TACTCCTTGCTAAGGCAACG+AGG | + | tig0028674:12468-12487 | None:intergenic | 50.0% | |
| !! | GATGGGAAGGTGTTTGCCTT+AGG | - | tig0028674:12682-12701 | Msa1438970:three_prime_UTR | 50.0% |
| CGATGCTCAAACTCACCCTA+AGG | + | tig0028674:12701-12720 | None:intergenic | 50.0% | |
| GCCGTATCTCTAGCTGATGT+AGG | - | tig0028674:12739-12758 | Msa1438970:three_prime_UTR | 50.0% | |
| GGAGAGTGGACAAATGTGGA+TGG | + | tig0028674:12896-12915 | None:intergenic | 50.0% | |
| !! | AAATACTTGTGGGGGTGTCC+AGG | + | tig0028674:13153-13172 | None:intergenic | 50.0% |
| AGATCATCCTACGCAGGATC+AGG | - | tig0028674:13269-13288 | Msa1438970:intron | 50.0% | |
| GATCATCCTACGCAGGATCA+GGG | - | tig0028674:13270-13289 | Msa1438970:intron | 50.0% | |
| AGAATCAGGCATACTGGTCC+TGG | - | tig0028674:14612-14631 | Msa1438970:intron | 50.0% | |
| ! | CCTGGCCTTTCAGTTTGAAC+CGG | + | tig0028674:15923-15942 | None:intergenic | 50.0% |
| ! | GGTCATTACAAGTGGGCTCT+TGG | - | tig0028674:16054-16073 | Msa1438970:intron | 50.0% |
| GTGAGCTTAGCTCAGTTGGT+TGG | - | tig0028674:16793-16812 | Msa1438970:intron | 50.0% | |
| !! | GAGGCGGCTTGTTATGTTGA+AGG | + | tig0028674:17185-17204 | None:intergenic | 50.0% |
| ACAAGCAGATCTTGTGGTGG+GGG | - | tig0028674:17243-17262 | Msa1438970:intron | 50.0% | |
| TATCGCTCGGACTTCTTTCC+TGG | - | tig0028674:17627-17646 | Msa1438970:intron | 50.0% | |
| TCGGACTTCTTTCCTGGACT+AGG | - | tig0028674:17633-17652 | Msa1438970:intron | 50.0% | |
| ! | GGATGCTGGCTAGATCTACA+TGG | - | tig0028674:17658-17677 | Msa1438970:intron | 50.0% |
| ! | GGATATGCCTTCGGCCATTT+TGG | + | tig0028674:17696-17715 | None:intergenic | 50.0% |
| ACTTCACCTACTGGGACGAT+TGG | - | tig0028674:17951-17970 | Msa1438970:intron | 50.0% | |
| TCTCAACCAATCGTCCCAGT+AGG | + | tig0028674:17960-17979 | None:intergenic | 50.0% | |
| GAAGGTCGACTGGAAGTCAA+TGG | - | tig0028674:18482-18501 | Msa1438970:intron | 50.0% | |
| GCTTCTGTTCACTTCCAGGA+TGG | - | tig0028674:18904-18923 | Msa1438970:intron | 50.0% | |
| AGGTACGGACGAGAATGTGA+TGG | - | tig0028674:19153-19172 | Msa1438970:intron | 50.0% | |
| GTGATCATAGAGTGTGGCCT+TGG | - | tig0028674:19316-19335 | Msa1438970:intron | 50.0% | |
| ! | GATCATAGAGTGTGGCCTTG+GGG | - | tig0028674:19318-19337 | Msa1438970:intron | 50.0% |
| AGGCAACTCTGAGCTCAACC+TGG | + | tig0028674:11652-11671 | None:intergenic | 55.0% | |
| TGGTCGAGGCTTGTGAGGTA+AGG | + | tig0028674:12254-12273 | None:intergenic | 55.0% | |
| AAAGGTGGTCGAGGCTTGTG+AGG | + | tig0028674:12259-12278 | None:intergenic | 55.0% | |
| ! | TGTGCTGGTAAAGGTGGTCG+AGG | + | tig0028674:12268-12287 | None:intergenic | 55.0% |
| CTCACTTGAGGGACTGCCAA+CGG | + | tig0028674:12396-12415 | None:intergenic | 55.0% | |
| AGAGCCTCGTTGCCTTAGCA+AGG | - | tig0028674:12461-12480 | Msa1438970:three_prime_UTR | 55.0% | |
| GAGTCGAGATCATCCTACGC+AGG | - | tig0028674:13263-13282 | Msa1438970:intron | 55.0% | |
| ATCCTACGCAGGATCAGGGA+GGG | - | tig0028674:13274-13293 | Msa1438970:intron | 55.0% | |
| AGTGACAGAACAGTTGCGCG+TGG | + | tig0028674:13731-13750 | None:intergenic | 55.0% | |
| ! | CTAGGCGTGAGGGAGTGTAT+TGG | + | tig0028674:14784-14803 | None:intergenic | 55.0% |
| ACACACCAAGCCCAACAGCT+AGG | + | tig0028674:14802-14821 | None:intergenic | 55.0% | |
| !! | TAGCTGTTGGGCTTGGTGTG+TGG | - | tig0028674:14801-14820 | Msa1438970:intron | 55.0% |
| TGGCATAGTGGTAGGGGCTT+GGG | - | tig0028674:15609-15628 | Msa1438970:intron | 55.0% | |
| CCGGTTCAAACTGAAAGGCC+AGG | - | tig0028674:15920-15939 | Msa1438970:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | tig0028674:16792-16811 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | tig0028674:16789-16808 | Msa1438970:intron | 55.0% | |
| TTTAAGCAACCAGCCGCAGC+AGG | - | tig0028674:17211-17230 | Msa1438970:intron | 55.0% | |
| !! | TTGTTGTTTCCTGCTGCGGC+TGG | + | tig0028674:17223-17242 | None:intergenic | 55.0% |
| ! | TCCTGGACTAGGATGGATGC+TGG | - | tig0028674:17644-17663 | Msa1438970:intron | 55.0% |
| TGGAGCAGACTTCGCTCAGA+AGG | - | tig0028674:18660-18679 | Msa1438970:intron | 55.0% | |
| ACTTCCAGGATGGTGTGCCT+AGG | - | tig0028674:18914-18933 | Msa1438970:intron | 55.0% | |
| CATCCTACGCAGGATCAGGG+AGG | - | tig0028674:13273-13292 | Msa1438970:intron | 60.0% | |
| TCCTACGCAGGATCAGGGAG+GGG | - | tig0028674:13275-13294 | Msa1438970:intron | 60.0% | |
| ACTCCCTCACGCCTAGCTGT+TGG | - | tig0028674:14788-14807 | Msa1438970:intron | 60.0% | |
| CTCCCTCACGCCTAGCTGTT+GGG | - | tig0028674:14789-14808 | Msa1438970:intron | 60.0% | |
| AGCCCAACAGCTAGGCGTGA+GGG | + | tig0028674:14794-14813 | None:intergenic | 60.0% | |
| AAGCCCAACAGCTAGGCGTG+AGG | + | tig0028674:14795-14814 | None:intergenic | 60.0% | |
| TCACGCCTAGCTGTTGGGCT+TGG | - | tig0028674:14794-14813 | Msa1438970:intron | 60.0% | |
| GTGGCATAGTGGTAGGGGCT+TGG | - | tig0028674:15608-15627 | Msa1438970:intron | 60.0% | |
| ! | AGCAGATCTTGTGGTGGGGG+TGG | - | tig0028674:17246-17265 | Msa1438970:intron | 60.0% |
| ! | GCAGATCTTGTGGTGGGGGT+GGG | - | tig0028674:17247-17266 | Msa1438970:intron | 60.0% |
| ! | CAGATCTTGTGGTGGGGGTG+GGG | - | tig0028674:17248-17267 | Msa1438970:intron | 60.0% |
| GCCAGCATCCATCCTAGTCC+AGG | + | tig0028674:17648-17667 | None:intergenic | 60.0% | |
| GCGAAGTCTGCTCCAGAGAC+AGG | + | tig0028674:18655-18674 | None:intergenic | 60.0% | |
| CTGTCCTAGGCACACCATCC+TGG | + | tig0028674:18921-18940 | None:intergenic | 60.0% | |
| ACCCCTCCCTGATCCTGCGT+AGG | + | tig0028674:13279-13298 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028674 | gene | 10988 | 19517 | 10988 | ID=Msa1438970;Name=Msa1438970 |
| tig0028674 | mRNA | 10988 | 19517 | 10988 | ID=Msa1438970-mRNA-1;Parent=Msa1438970;Name=Msa1438970-mRNA-1;_AED=0.15;_eAED=0.15;_QI=79|1|1|1|0.93|0.93|16|1201|286 |
| tig0028674 | exon | 10988 | 11583 | 10988 | ID=Msa1438970-mRNA-1:exon:11548;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 11728 | 11898 | 11728 | ID=Msa1438970-mRNA-1:exon:11547;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 11981 | 12019 | 11981 | ID=Msa1438970-mRNA-1:exon:11546;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 12104 | 12166 | 12104 | ID=Msa1438970-mRNA-1:exon:11545;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 12454 | 12886 | 12454 | ID=Msa1438970-mRNA-1:exon:11544;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 14049 | 14110 | 14049 | ID=Msa1438970-mRNA-1:exon:11543;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 14218 | 14287 | 14218 | ID=Msa1438970-mRNA-1:exon:11542;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 14382 | 14450 | 14382 | ID=Msa1438970-mRNA-1:exon:11541;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 14534 | 14600 | 14534 | ID=Msa1438970-mRNA-1:exon:11540;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 18357 | 18419 | 18357 | ID=Msa1438970-mRNA-1:exon:11539;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 18554 | 18599 | 18554 | ID=Msa1438970-mRNA-1:exon:11538;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 18682 | 18758 | 18682 | ID=Msa1438970-mRNA-1:exon:11537;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 18853 | 18887 | 18853 | ID=Msa1438970-mRNA-1:exon:11536;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 18991 | 19141 | 18991 | ID=Msa1438970-mRNA-1:exon:11535;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 19227 | 19277 | 19227 | ID=Msa1438970-mRNA-1:exon:11534;Parent=Msa1438970-mRNA-1 |
| tig0028674 | exon | 19370 | 19517 | 19370 | ID=Msa1438970-mRNA-1:exon:11533;Parent=Msa1438970-mRNA-1 |
| tig0028674 | five_prime_UTR | 19439 | 19517 | 19439 | ID=Msa1438970-mRNA-1:five_prime_utr;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 19370 | 19438 | 19370 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 19227 | 19277 | 19227 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 18991 | 19141 | 18991 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 18853 | 18887 | 18853 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 18682 | 18758 | 18682 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 18554 | 18599 | 18554 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 18357 | 18419 | 18357 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 14534 | 14600 | 14534 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 14382 | 14450 | 14382 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 14218 | 14287 | 14218 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 14049 | 14110 | 14049 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | CDS | 12786 | 12886 | 12786 | ID=Msa1438970-mRNA-1:cds;Parent=Msa1438970-mRNA-1 |
| tig0028674 | three_prime_UTR | 12454 | 12785 | 12454 | ID=Msa1438970-mRNA-1:three_prime_utr;Parent=Msa1438970-mRNA-1 |
| tig0028674 | three_prime_UTR | 12104 | 12166 | 12104 | ID=Msa1438970-mRNA-1:three_prime_utr;Parent=Msa1438970-mRNA-1 |
| tig0028674 | three_prime_UTR | 11981 | 12019 | 11981 | ID=Msa1438970-mRNA-1:three_prime_utr;Parent=Msa1438970-mRNA-1 |
| tig0028674 | three_prime_UTR | 11728 | 11898 | 11728 | ID=Msa1438970-mRNA-1:three_prime_utr;Parent=Msa1438970-mRNA-1 |
| tig0028674 | three_prime_UTR | 10988 | 11583 | 10988 | ID=Msa1438970-mRNA-1:three_prime_utr;Parent=Msa1438970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
