Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198360 | XP_003628914.1 | 92.250 | 529 | 6 | 1 | 1 | 494 | 1 | 529 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198360 | sp|Q8VYN6|PFKA5_ARATH | 71.058 | 539 | 109 | 6 | 1 | 494 | 1 | 537 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198360 | G7LJ94 | 92.250 | 529 | 6 | 1 | 1 | 494 | 1 | 529 | 0.0 | 1001 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0625100 | Msa1198360 | 0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0670280 | Msa1198360 | 0.801819 | 7.521131e-49 | -8.615850e-47 |
| Msa0792250 | Msa1198360 | 0.942761 | 4.048144e-102 | -8.615850e-47 |
| Msa0422650 | Msa1198360 | 0.815879 | 7.373935e-52 | -8.615850e-47 |
| Msa0422740 | Msa1198360 | 0.816374 | 5.716304e-52 | -8.615850e-47 |
| Msa0422960 | Msa1198360 | 0.813736 | 2.200489e-51 | -8.615850e-47 |
| Msa0300470 | Msa1198360 | 0.806668 | 7.354923e-50 | -8.615850e-47 |
| Msa1198360 | Msa1265940 | 0.810760 | 9.819623e-51 | -8.615850e-47 |
| Msa1198360 | Msa1292660 | 0.840802 | 6.981267e-58 | -8.615850e-47 |
| Msa1198360 | Msa1303400 | 0.829783 | 4.243729e-55 | -8.615850e-47 |
| Msa1198360 | Msa1431020 | 0.807353 | 5.269919e-50 | -8.615850e-47 |
| Msa0514750 | Msa1198360 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198360 | MtrunA17_Chr8g0367681 | 92.250 | 529 | 6 | 1 | 1 | 494 | 1 | 529 | 0.0 | 1001 |
| Msa1198360 | MtrunA17_Chr5g0412481 | 77.980 | 495 | 72 | 2 | 35 | 494 | 41 | 533 | 0.0 | 793 |
| Msa1198360 | MtrunA17_Chr1g0196891 | 44.105 | 458 | 188 | 8 | 78 | 494 | 90 | 520 | 2.28e-118 | 358 |
| Msa1198360 | MtrunA17_Chr3g0140611 | 49.206 | 378 | 149 | 4 | 158 | 494 | 79 | 454 | 2.92e-117 | 354 |
| Msa1198360 | MtrunA17_Chr6g0487421 | 42.702 | 459 | 193 | 9 | 78 | 494 | 20 | 450 | 1.84e-116 | 352 |
| Msa1198360 | MtrunA17_Chr8g0389631 | 43.261 | 460 | 190 | 10 | 78 | 494 | 23 | 454 | 4.22e-115 | 347 |
| Msa1198360 | MtrunA17_Chr2g0330871 | 42.702 | 459 | 193 | 8 | 78 | 494 | 23 | 453 | 3.49e-114 | 345 |
| Msa1198360 | MtrunA17_Chr4g0076591 | 40.058 | 347 | 167 | 3 | 189 | 494 | 92 | 438 | 2.80e-82 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198360 | AT2G22480.1 | 71.058 | 539 | 109 | 6 | 1 | 494 | 1 | 537 | 0.0 | 771 |
| Msa1198360 | AT4G29220.1 | 43.450 | 458 | 190 | 9 | 78 | 494 | 24 | 453 | 8.82e-120 | 360 |
| Msa1198360 | AT5G56630.1 | 42.670 | 457 | 194 | 8 | 78 | 494 | 23 | 451 | 2.59e-118 | 356 |
| Msa1198360 | AT4G26270.1 | 43.545 | 457 | 191 | 8 | 78 | 494 | 23 | 452 | 4.42e-118 | 356 |
| Msa1198360 | AT4G32840.1 | 42.763 | 456 | 194 | 9 | 78 | 494 | 24 | 451 | 1.37e-116 | 351 |
| Msa1198360 | AT5G61580.1 | 41.921 | 458 | 198 | 6 | 78 | 494 | 74 | 504 | 1.54e-115 | 351 |
| Msa1198360 | AT5G61580.2 | 42.174 | 460 | 193 | 8 | 78 | 494 | 74 | 503 | 3.83e-114 | 347 |
| Msa1198360 | AT5G47810.1 | 45.144 | 381 | 161 | 6 | 157 | 493 | 62 | 438 | 7.45e-102 | 313 |
Find 153 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAACCTCCTGACTTTAT+TGG | 0.111185 | 8_1:+49790266 | None:intergenic |
| GCATCGGGAAATATTGTATT+TGG | 0.212553 | 8_1:-49791266 | Msa1198360:CDS |
| ATTGCTGCCTTTACATCTTC+TGG | 0.244966 | 8_1:+49793891 | None:intergenic |
| CCAATAAAGTCAGGAGGTTT+TGG | 0.247329 | 8_1:-49790266 | Msa1198360:three_prime_UTR |
| AAGGTAGGGGTTGGTGGTGG+TGG | 0.277346 | 8_1:+49796774 | None:intergenic |
| CAGGTTCATGGTGCATTTGC+AGG | 0.304702 | 8_1:-49790453 | Msa1198360:CDS |
| GTAATTACACTTGAAATATA+TGG | 0.308392 | 8_1:-49793369 | Msa1198360:CDS |
| CATAGTGCATATCATGGAAT+TGG | 0.311056 | 8_1:-49792258 | Msa1198360:CDS |
| TGATAATGATATTCTATTGA+TGG | 0.314500 | 8_1:-49792447 | Msa1198360:CDS |
| TAGTGATATCGTGGATAGTT+TGG | 0.315207 | 8_1:-49793071 | Msa1198360:CDS |
| TAGAGGAACGGGTTTGAGTT+TGG | 0.319991 | 8_1:+49796740 | None:intergenic |
| AGAAGGAATAGGAGGAGAAT+CGG | 0.321030 | 8_1:+49796543 | None:intergenic |
| AAGGTTAAGGTAGGGGTTGG+TGG | 0.328226 | 8_1:+49796768 | None:intergenic |
| CAGTCATATCTCAAAATAAT+AGG | 0.330054 | 8_1:-49790175 | Msa1198360:three_prime_UTR |
| GACTGTTTCGGCAAATTTGC+CGG | 0.333526 | 8_1:+49790193 | None:intergenic |
| CTATTGATGGATAAAACATT+TGG | 0.346190 | 8_1:-49792434 | Msa1198360:CDS |
| CGTCAACCTGTCCACTAGAT+AGG | 0.361135 | 8_1:+49792184 | None:intergenic |
| CTATCTGGTGGAAGCCTGTT+GGG | 0.362368 | 8_1:-49793118 | Msa1198360:CDS |
| GAGTGTGAGTATAGAGGAAC+GGG | 0.362946 | 8_1:+49796729 | None:intergenic |
| CGGGGATGCGATATTACTTC+GGG | 0.363464 | 8_1:+49790375 | None:intergenic |
| AATATTGTATTTGGAGATAT+CGG | 0.363677 | 8_1:-49791257 | Msa1198360:CDS |
| TTGATTTCAATGATCCTGAT+TGG | 0.365082 | 8_1:-49796630 | Msa1198360:CDS |
| GGGTTCATCGAGCTGGGCCT+CGG | 0.369686 | 8_1:-49793932 | Msa1198360:CDS |
| GTTCAGAATATTCATCTATC+TGG | 0.385946 | 8_1:-49793133 | Msa1198360:CDS |
| GAGTTTGGTGAGGAAGGTTA+AGG | 0.389338 | 8_1:+49796755 | None:intergenic |
| AAGATAGTGGGGATTCCTTT+CGG | 0.398897 | 8_1:-49793339 | Msa1198360:CDS |
| GACTGTTCGGGTCCACCAAT+CGG | 0.402341 | 8_1:+49790355 | None:intergenic |
| TGAAACTTGAATTTCCAATC+AGG | 0.406627 | 8_1:+49796616 | None:intergenic |
| ATAGTGCATATCATGGAATT+GGG | 0.407095 | 8_1:-49792257 | Msa1198360:CDS |
| AGACAAAAGGTAGAAGGAAT+AGG | 0.407681 | 8_1:+49796532 | None:intergenic |
| GTTAAGGTAGGGGTTGGTGG+TGG | 0.412439 | 8_1:+49796771 | None:intergenic |
| GCATTGACCCCGATTGTACT+TGG | 0.416229 | 8_1:-49794870 | Msa1198360:CDS |
| ATTCTAAGACAAAAGGTAGA+AGG | 0.417919 | 8_1:+49796526 | None:intergenic |
| GTGAGAGAGTGTGAGTATAG+AGG | 0.422982 | 8_1:+49796723 | None:intergenic |
| TGCGATATTACTTCGGGGAT+GGG | 0.431742 | 8_1:+49790381 | None:intergenic |
| CACTCAGCACCAGCAGATTT+AGG | 0.432003 | 8_1:+49794892 | None:intergenic |
| GAAGGAATAGGAGGAGAATC+GGG | 0.437265 | 8_1:+49796544 | None:intergenic |
| ACATGTGGAGGGCTCTGCCC+TGG | 0.437636 | 8_1:-49793864 | Msa1198360:CDS |
| CGATGCCACATACGACTGTT+CGG | 0.437945 | 8_1:+49790342 | None:intergenic |
| TCAGATTTCACACTCTTCAA+TGG | 0.440265 | 8_1:-49796818 | Msa1198360:exon |
| TTGTTCTACCCAAGTACAAT+CGG | 0.442406 | 8_1:+49794861 | None:intergenic |
| CATCGATGCTTAACTTCAAC+CGG | 0.452354 | 8_1:-49790324 | Msa1198360:CDS |
| AATAATTATCAGATGAAGTC+AGG | 0.452604 | 8_1:+49790297 | None:intergenic |
| AATGTTAATTTGAATGCTGC+AGG | 0.455307 | 8_1:+49790089 | None:intergenic |
| ACTTCCAAAGAGTATATCAT+AGG | 0.456586 | 8_1:-49790236 | Msa1198360:three_prime_UTR |
| GGGTTTGAGTTTGGTGAGGA+AGG | 0.457670 | 8_1:+49796749 | None:intergenic |
| CTTGAAAACTCTACGGGAGT+TGG | 0.458913 | 8_1:+49796699 | None:intergenic |
| TGGTGGTGGTGGTGATCGCG+TGG | 0.459745 | 8_1:+49796785 | None:intergenic |
| ACAAATCGATCAATTACAAA+TGG | 0.461669 | 8_1:+49790025 | None:intergenic |
| CTTTCTAGGGTTCATCGAGC+TGG | 0.462660 | 8_1:-49793939 | Msa1198360:intron |
| CGGCTCAAGATGTCTATCAT+TGG | 0.465886 | 8_1:-49792485 | Msa1198360:CDS |
| AATTGGGGTTGTGAAGTTGA+TGG | 0.469121 | 8_1:-49792241 | Msa1198360:CDS |
| ACTGTTCGGGTCCACCAATC+GGG | 0.469333 | 8_1:+49790356 | None:intergenic |
| TTACACTTTCCAATAAAGTC+AGG | 0.471544 | 8_1:-49790275 | Msa1198360:three_prime_UTR |
| GGTTCATCGAGCTGGGCCTC+GGG | 0.477026 | 8_1:-49793931 | Msa1198360:CDS |
| TCCCGATGCATCTTTAGCAT+TGG | 0.478146 | 8_1:+49791280 | None:intergenic |
| AGTAATATCGCATCCCCGAT+TGG | 0.481709 | 8_1:-49790370 | Msa1198360:CDS |
| TAGTGGGTTCATTGCAATGC+AGG | 0.484265 | 8_1:-49792211 | Msa1198360:CDS |
| CTCCTCGTGAAACTCCCAAC+AGG | 0.484432 | 8_1:+49793104 | None:intergenic |
| GCGATATTACTTCGGGGATG+GGG | 0.486371 | 8_1:+49790382 | None:intergenic |
| CATTTATGTATCTCATATTG+AGG | 0.487973 | 8_1:-49790000 | Msa1198360:three_prime_UTR |
| TGGTGAGGAAGGTTAAGGTA+GGG | 0.488106 | 8_1:+49796760 | None:intergenic |
| TTGGTGAGGAAGGTTAAGGT+AGG | 0.488792 | 8_1:+49796759 | None:intergenic |
| GGAGTTTCACGAGGAGGACC+TGG | 0.491463 | 8_1:-49793097 | Msa1198360:CDS |
| AAACCTCATTCTAAGACAAA+AGG | 0.492051 | 8_1:+49796519 | None:intergenic |
| TCTATCTGGTGGAAGCCTGT+TGG | 0.493149 | 8_1:-49793119 | Msa1198360:CDS |
| CCGATTGGTAAAGATATTCC+AGG | 0.494367 | 8_1:-49795950 | Msa1198360:CDS |
| CACCAATGCTAAAGATGCAT+CGG | 0.496246 | 8_1:-49791282 | Msa1198360:CDS |
| TTTCTAGGGTTCATCGAGCT+GGG | 0.496291 | 8_1:-49793938 | Msa1198360:intron |
| GGCTTCCCTATCTAGTGGAC+AGG | 0.496499 | 8_1:-49792190 | Msa1198360:CDS |
| TGCAGTGGAAGAAGCTCAAA+GGG | 0.498886 | 8_1:-49792402 | Msa1198360:CDS |
| TGATTGAATGTGAGAGATGA+AGG | 0.498998 | 8_1:+49796844 | None:intergenic |
| TTATTGATTTGTAGGAGAGA+GGG | 0.500902 | 8_1:-49792961 | Msa1198360:intron |
| GGTGAGGAAGGTTAAGGTAG+GGG | 0.500910 | 8_1:+49796761 | None:intergenic |
| CAACATTCTTGAAAACTCTA+CGG | 0.503654 | 8_1:+49796692 | None:intergenic |
| TCAGATGAAGTCAGGTTGGC+CGG | 0.505132 | 8_1:+49790305 | None:intergenic |
| GATGCCACATACGACTGTTC+GGG | 0.505910 | 8_1:+49790343 | None:intergenic |
| AGAGTGTGAGTATAGAGGAA+CGG | 0.510196 | 8_1:+49796728 | None:intergenic |
| ATTATTGATTTGTAGGAGAG+AGG | 0.511641 | 8_1:-49792962 | Msa1198360:intron |
| AAATAGCTTCAAATTATGTC+CGG | 0.517300 | 8_1:-49790212 | Msa1198360:three_prime_UTR |
| ACCAATGCTAAAGATGCATC+GGG | 0.527721 | 8_1:-49791281 | Msa1198360:CDS |
| ATTGGGGTTGTGAAGTTGAT+GGG | 0.528880 | 8_1:-49792240 | Msa1198360:CDS |
| CCTGGAATATCTTTACCAAT+CGG | 0.529294 | 8_1:+49795950 | None:intergenic |
| TAGGCACATAGTGCATATCA+TGG | 0.529509 | 8_1:-49792264 | Msa1198360:CDS |
| TGTTCTACCCAAGTACAATC+GGG | 0.533435 | 8_1:+49794862 | None:intergenic |
| CTATAAACCAGAAGATGTAA+AGG | 0.533722 | 8_1:-49793898 | Msa1198360:CDS |
| TATTCATCGCCTAAATCTGC+TGG | 0.535561 | 8_1:-49794901 | Msa1198360:CDS |
| CAAAAGGTAGAAGGAATAGG+AGG | 0.537406 | 8_1:+49796535 | None:intergenic |
| ATGCGATATTACTTCGGGGA+TGG | 0.538861 | 8_1:+49790380 | None:intergenic |
| TTCACAGCTGTCGAGAAAAG+TGG | 0.542202 | 8_1:-49793155 | Msa1198360:intron |
| TGATATCGTGGATAGTTTGG+AGG | 0.544206 | 8_1:-49793068 | Msa1198360:intron |
| TCGGGGATGCGATATTACTT+CGG | 0.544737 | 8_1:+49790374 | None:intergenic |
| AAGTTGATGGGCCGTAGTAG+TGG | 0.546997 | 8_1:-49792228 | Msa1198360:CDS |
| CAAAGAATTGACAGAAGTGC+CGG | 0.549478 | 8_1:-49793298 | Msa1198360:intron |
| GCAGCAATTGTCACATGTGG+AGG | 0.550504 | 8_1:-49793876 | Msa1198360:CDS |
| GGTGGAAATGGCACACATGC+AGG | 0.551168 | 8_1:-49792917 | Msa1198360:CDS |
| GGGATTCCTTTCGGTTATCG+TGG | 0.553476 | 8_1:-49793330 | Msa1198360:CDS |
| GGAAAGATATCAGTAATATG+AGG | 0.553896 | 8_1:+49796565 | None:intergenic |
| GGTGGTGGTGGTGATCGCGT+GGG | 0.554656 | 8_1:+49796786 | None:intergenic |
| AGGAAGGTTAAGGTAGGGGT+TGG | 0.554897 | 8_1:+49796765 | None:intergenic |
| AACATTCTTGAAAACTCTAC+GGG | 0.555894 | 8_1:+49796693 | None:intergenic |
| AATAAATTCTGCATACATTG+AGG | 0.556730 | 8_1:-49792378 | Msa1198360:intron |
| ATTTGGTTATTTGTATAGCA+TGG | 0.558081 | 8_1:-49790128 | Msa1198360:three_prime_UTR |
| CATGCACGGATCATATATGT+TGG | 0.559002 | 8_1:+49790652 | None:intergenic |
| AGGTCATTATACATTGGATG+AGG | 0.559612 | 8_1:-49795930 | Msa1198360:CDS |
| TTGCAATGAACCCACTACTA+CGG | 0.560133 | 8_1:+49792217 | None:intergenic |
| CTGCAGTGGAAGAAGCTCAA+AGG | 0.561250 | 8_1:-49792403 | Msa1198360:CDS |
| CATTGACCCCGATTGTACTT+GGG | 0.561467 | 8_1:-49794869 | Msa1198360:CDS |
| TCTTAATGATGTCATCAGAC+AGG | 0.562649 | 8_1:-49793841 | Msa1198360:intron |
| CTGATGACATCATTAAGACC+AGG | 0.563339 | 8_1:+49793846 | None:intergenic |
| CAGAATATTCATCTATCTGG+TGG | 0.567796 | 8_1:-49793130 | Msa1198360:CDS |
| GAACGGGTTTGAGTTTGGTG+AGG | 0.569055 | 8_1:+49796745 | None:intergenic |
| CACTTTCCAATAAAGTCAGG+AGG | 0.573522 | 8_1:-49790272 | Msa1198360:three_prime_UTR |
| CGGTGTATATATTCAACAAG+AGG | 0.579239 | 8_1:-49791237 | Msa1198360:intron |
| AGTTGATGGGCCGTAGTAGT+GGG | 0.579276 | 8_1:-49792227 | Msa1198360:CDS |
| ATGCATTTGCTCGACATGCA+CGG | 0.579559 | 8_1:+49790638 | None:intergenic |
| TATTCCAGGTCATTATACAT+TGG | 0.579882 | 8_1:-49795936 | Msa1198360:CDS |
| TGTCGAGCAAATGCATCAGA+TGG | 0.581648 | 8_1:-49790631 | Msa1198360:CDS |
| GTCAACCTGTCCACTAGATA+GGG | 0.582532 | 8_1:+49792185 | None:intergenic |
| TTGACTTAGTTATGATATCG+AGG | 0.589140 | 8_1:+49796931 | None:intergenic |
| ATGCAGGCTTCCCTATCTAG+TGG | 0.589232 | 8_1:-49792195 | Msa1198360:CDS |
| CATATCTCAAAATAATAGGA+AGG | 0.594576 | 8_1:-49790171 | Msa1198360:three_prime_UTR |
| ACCTGGAGTTAGTGATATCG+TGG | 0.598888 | 8_1:-49793080 | Msa1198360:CDS |
| GAGAGATGAAGGTGAAGGAT+CGG | 0.600041 | 8_1:+49796855 | None:intergenic |
| AAGGTGAAGGATCGGTCGGA+AGG | 0.602512 | 8_1:+49796863 | None:intergenic |
| ATTATCAGATGAAGTCAGGT+TGG | 0.604141 | 8_1:+49790301 | None:intergenic |
| TCCACGATATCACTAACTCC+AGG | 0.605449 | 8_1:+49793079 | None:intergenic |
| TCATCCAATGTATAATGACC+TGG | 0.609349 | 8_1:+49795932 | None:intergenic |
| GATGAAGGTGAAGGATCGGT+CGG | 0.609476 | 8_1:+49796859 | None:intergenic |
| TGGACCCGAACAGTCGTATG+TGG | 0.610001 | 8_1:-49790347 | Msa1198360:CDS |
| CAGCAATTGTCACATGTGGA+GGG | 0.611394 | 8_1:-49793875 | Msa1198360:CDS |
| GGATACAGCGGCATTTCAGT+AGG | 0.611770 | 8_1:-49790432 | Msa1198360:CDS |
| ACATTGGATGAGGAGTGGAA+TGG | 0.612135 | 8_1:-49795920 | Msa1198360:CDS |
| AGATATCAGTAATATGAGGA+AGG | 0.612838 | 8_1:+49796569 | None:intergenic |
| CAATGATAGAGTGCTTCTCA+AGG | 0.614711 | 8_1:-49795885 | Msa1198360:intron |
| ATTATACATTGGATGAGGAG+TGG | 0.617373 | 8_1:-49795925 | Msa1198360:CDS |
| AAGGCAGCAATTGTCACATG+TGG | 0.622549 | 8_1:-49793879 | Msa1198360:CDS |
| AATATCGCATCCCCGATTGG+TGG | 0.629075 | 8_1:-49790367 | Msa1198360:CDS |
| TAGTGCATATCATGGAATTG+GGG | 0.631622 | 8_1:-49792256 | Msa1198360:CDS |
| ATTTGGCTTTGATACTGCAG+TGG | 0.632353 | 8_1:-49792417 | Msa1198360:CDS |
| ATTGTACTTGGGTAGAACAA+TGG | 0.638934 | 8_1:-49794858 | Msa1198360:intron |
| AGCCTGTTGGGAGTTTCACG+AGG | 0.643100 | 8_1:-49793106 | Msa1198360:CDS |
| GAAAATCCACGATAACCGAA+AGG | 0.646686 | 8_1:+49793324 | None:intergenic |
| TGCAAATGCAATTCACAATG+AGG | 0.654664 | 8_1:-49792894 | Msa1198360:intron |
| CAAAATTTAATGAAATACAC+AGG | 0.656121 | 8_1:-49789976 | Msa1198360:three_prime_UTR |
| GGTGCATTTGCAGGATACAG+CGG | 0.660464 | 8_1:-49790444 | Msa1198360:CDS |
| TGATGACATCATTAAGACCA+GGG | 0.677608 | 8_1:+49793847 | None:intergenic |
| CTGTTCGGGTCCACCAATCG+GGG | 0.681048 | 8_1:+49790357 | None:intergenic |
| CTGTTGGGAGTTTCACGAGG+AGG | 0.684746 | 8_1:-49793103 | Msa1198360:CDS |
| TGACGTATGTCTGATTCCCG+AGG | 0.684919 | 8_1:-49792166 | Msa1198360:intron |
| GGGGATGCGATATTACTTCG+GGG | 0.704257 | 8_1:+49790376 | None:intergenic |
| GTTCTACCCAAGTACAATCG+GGG | 0.709838 | 8_1:+49794863 | None:intergenic |
| AATGTGAGAGATGAAGGTGA+AGG | 0.742926 | 8_1:+49796850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTATCTTAAAAAATAT+TGG | - | chr8_1:49790733-49790752 | Msa1198360:intron | 10.0% |
| !!! | TTTTATCTTAAAAAATATTG+GGG | - | chr8_1:49790735-49790754 | Msa1198360:intron | 10.0% |
| !! | AATTATATACTTAAATGTAA+AGG | + | chr8_1:49793370-49793389 | None:intergenic | 10.0% |
| !! | TAATTAATGTTACATTTAAA+AGG | + | chr8_1:49795025-49795044 | None:intergenic | 10.0% |
| !!! | ATAATTCAATTACAATTTTT+TGG | - | chr8_1:49795985-49796004 | Msa1198360:intron | 10.0% |
| !!! | TAATTCAATTACAATTTTTT+GGG | - | chr8_1:49795986-49796005 | Msa1198360:intron | 10.0% |
| !! | ACAAAAACAAAACATATATT+AGG | + | chr8_1:49790907-49790926 | None:intergenic | 15.0% |
| !! | CTTAAAACAACATTAATTAA+GGG | + | chr8_1:49791046-49791065 | None:intergenic | 15.0% |
| !! | ACTTAAAACAACATTAATTA+AGG | + | chr8_1:49791047-49791066 | None:intergenic | 15.0% |
| !!! | ATTAATTTTGAATTGAATCA+GGG | - | chr8_1:49791107-49791126 | Msa1198360:intron | 15.0% |
| !!! | ATTTGATATAAGTAAGTTTT+AGG | - | chr8_1:49791165-49791184 | Msa1198360:intron | 15.0% |
| !! | TTTAAAAAAAAAACATGATG+TGG | - | chr8_1:49791915-49791934 | Msa1198360:intron | 15.0% |
| !! | ACTATCTGATAAAAAAAAAA+GGG | + | chr8_1:49792828-49792847 | None:intergenic | 15.0% |
| !! | AACTATCTGATAAAAAAAAA+AGG | + | chr8_1:49792829-49792848 | None:intergenic | 15.0% |
| !!! | AAGATATATTTAAAGTTAGT+TGG | + | chr8_1:49793298-49793317 | None:intergenic | 15.0% |
| !! | AACTATAGTTAAATTGTTAT+TGG | + | chr8_1:49793703-49793722 | None:intergenic | 15.0% |
| !!! | ATATCATTATCAATAGTTTT+CGG | + | chr8_1:49794431-49794450 | None:intergenic | 15.0% |
| !! | GTATGATAAAATAAATTTGA+TGG | - | chr8_1:49794746-49794765 | Msa1198360:intron | 15.0% |
| !!! | AAATATTGTCTTTATTTCTA+AGG | - | chr8_1:49794803-49794822 | Msa1198360:intron | 15.0% |
| !! | ATTATAAATTAATAGTTACC+TGG | + | chr8_1:49794929-49794948 | None:intergenic | 15.0% |
| !!! | ATTCATTTATTGTTTTTCTT+AGG | - | chr8_1:49795218-49795237 | Msa1198360:intron | 15.0% |
| !!! | TTCATTTATTGTTTTTCTTA+GGG | - | chr8_1:49795219-49795238 | Msa1198360:intron | 15.0% |
| !! | ATTTCTCTTTAACATTAATT+AGG | + | chr8_1:49795763-49795782 | None:intergenic | 15.0% |
| !! | AGATAAAAACACTGTTAAAT+AGG | + | chr8_1:49790723-49790742 | None:intergenic | 20.0% |
| !!! | CATTAATTTTGAATTGAATC+AGG | - | chr8_1:49791106-49791125 | Msa1198360:intron | 20.0% |
| !! | TAAACTTTATAAACCATATC+AGG | + | chr8_1:49791373-49791392 | None:intergenic | 20.0% |
| !! | TGATATGGTTTATAAAGTTT+AGG | - | chr8_1:49791372-49791391 | Msa1198360:intron | 20.0% |
| !! | GATATGGTTTATAAAGTTTA+GGG | - | chr8_1:49791373-49791392 | Msa1198360:intron | 20.0% |
| !! | ATATGGTTTATAAAGTTTAG+GGG | - | chr8_1:49791374-49791393 | Msa1198360:intron | 20.0% |
| !! | ATAATCTTCATCTTACAAAT+CGG | - | chr8_1:49791669-49791688 | Msa1198360:intron | 20.0% |
| !!! | GTTTTTTTTTTAAACGCTAT+TGG | + | chr8_1:49791909-49791928 | None:intergenic | 20.0% |
| !! | ATTCAGAAGTCATATTAATA+TGG | + | chr8_1:49792260-49792279 | None:intergenic | 20.0% |
| !! | TAATTCGATAATAACAGTAA+AGG | - | chr8_1:49792511-49792530 | Msa1198360:intron | 20.0% |
| !!! | GATAACTAACTTATTTTTCT+TGG | - | chr8_1:49792605-49792624 | Msa1198360:intron | 20.0% |
| !!! | TAGTTGTTACTTTTATTTTC+TGG | - | chr8_1:49792844-49792863 | Msa1198360:intron | 20.0% |
| !!! | TTTTTCGAAATTAGCTTATA+TGG | - | chr8_1:49792908-49792927 | Msa1198360:CDS | 20.0% |
| !! | TATACTTAAATGTAAAGGAA+GGG | + | chr8_1:49793365-49793384 | None:intergenic | 20.0% |
| !! | ATATACTTAAATGTAAAGGA+AGG | + | chr8_1:49793366-49793385 | None:intergenic | 20.0% |
| !!! | TGTTTTATATCTTGTAGTTA+AGG | - | chr8_1:49793396-49793415 | Msa1198360:intron | 20.0% |
| !! | GTAATTACACTTGAAATATA+TGG | - | chr8_1:49793517-49793536 | Msa1198360:intron | 20.0% |
| !!! | TATGTGTATTATTGATTTGT+AGG | - | chr8_1:49793917-49793936 | Msa1198360:CDS | 20.0% |
| !! | ATATTGTTCATTGAAATTCA+TGG | - | chr8_1:49794108-49794127 | Msa1198360:intron | 20.0% |
| !!! | CTAATAAGTGGTTATTTTTT+CGG | - | chr8_1:49794339-49794358 | Msa1198360:intron | 20.0% |
| !!! | TGATAATGATATTCTATTGA+TGG | - | chr8_1:49794439-49794458 | Msa1198360:intron | 20.0% |
| !! | CTCAATACACATTTAAATAT+TGG | - | chr8_1:49794577-49794596 | Msa1198360:intron | 20.0% |
| !!! | TTATTTTATCATACATACCT+CGG | + | chr8_1:49794740-49794759 | None:intergenic | 20.0% |
| !! | GTTACATTTAAAAGGTAAAA+AGG | + | chr8_1:49795017-49795036 | None:intergenic | 20.0% |
| !!! | GTTTTGAAGTAATCATTTTT+TGG | + | chr8_1:49795535-49795554 | None:intergenic | 20.0% |
| !! | AATATTGTATTTGGAGATAT+CGG | - | chr8_1:49795629-49795648 | Msa1198360:intron | 20.0% |
| !! | AGGTTTGTATTTATTGTTTA+TGG | - | chr8_1:49795669-49795688 | Msa1198360:intron | 20.0% |
| !!! | AACATTATCATTTTTCTAGT+CGG | + | chr8_1:49795814-49795833 | None:intergenic | 20.0% |
| !! | TCAGACAAAAAAATATTTCA+AGG | - | chr8_1:49796176-49796195 | Msa1198360:intron | 20.0% |
| !! | AAAAAATATTTCAAGGAGAT+TGG | - | chr8_1:49796183-49796202 | Msa1198360:intron | 20.0% |
| !!! | ACATTTTTCCTTTGAAAATT+TGG | - | chr8_1:49796741-49796760 | Msa1198360:CDS | 20.0% |
| !!! | ACAAATAACCAAATTTTCAA+AGG | + | chr8_1:49796752-49796771 | None:intergenic | 20.0% |
| !!! | CATTCAAATTAACATTTTAG+AGG | - | chr8_1:49796804-49796823 | Msa1198360:exon | 20.0% |
| !! | CAAAATTTAATGAAATACAC+AGG | - | chr8_1:49796910-49796929 | Msa1198360:five_prime_UTR | 20.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | - | chr8_1:49790498-49790517 | Msa1198360:intron | 25.0% |
| ! | TATCTTAAAAAATATTGGGG+AGG | - | chr8_1:49790738-49790757 | Msa1198360:intron | 25.0% |
| ! | ATCTTAAAAAATATTGGGGA+GGG | - | chr8_1:49790739-49790758 | Msa1198360:intron | 25.0% |
| ! | TAAAAAACGGAGTTCAAAAA+TGG | + | chr8_1:49790849-49790868 | None:intergenic | 25.0% |
| ! | TGTCACTGTAACTTAAAAAA+CGG | + | chr8_1:49790862-49790881 | None:intergenic | 25.0% |
| !!! | GATATAAGTAAGTTTTAGGT+TGG | - | chr8_1:49791169-49791188 | Msa1198360:intron | 25.0% |
| !!! | AGTTTATAAGCTGATTTTGT+CGG | - | chr8_1:49791238-49791257 | Msa1198360:CDS | 25.0% |
| !!! | ATATTTCTAGAAATGAGACT+TGG | + | chr8_1:49791415-49791434 | None:intergenic | 25.0% |
| !! | ACAATTTTTACCTTAGAACT+TGG | - | chr8_1:49791461-49791480 | Msa1198360:intron | 25.0% |
| !!! | TAATTTCAGGTACCATTTTA+GGG | + | chr8_1:49791511-49791530 | None:intergenic | 25.0% |
| !!! | ATAATTTCAGGTACCATTTT+AGG | + | chr8_1:49791512-49791531 | None:intergenic | 25.0% |
| ! | AATTATCCAAGATCCATTAT+TGG | - | chr8_1:49791526-49791545 | Msa1198360:intron | 25.0% |
| ! | ATTATCCAAGATCCATTATT+GGG | - | chr8_1:49791527-49791546 | Msa1198360:intron | 25.0% |
| ! | AAGCTTAATAAGTCCTATTT+AGG | + | chr8_1:49791647-49791666 | None:intergenic | 25.0% |
| !!! | TGCATTTTGTTTTATTATCC+TGG | - | chr8_1:49791799-49791818 | Msa1198360:intron | 25.0% |
| !! | ACTGCAAATGTTTAAAATTG+TGG | + | chr8_1:49792068-49792087 | None:intergenic | 25.0% |
| ! | GATGAATGTATTTGTTCTAT+TGG | - | chr8_1:49792424-49792443 | Msa1198360:CDS | 25.0% |
| !!! | TTATAGTATATTTTTTCCCG+AGG | + | chr8_1:49792974-49792993 | None:intergenic | 25.0% |
| ! | GTGCATTGGAATTTAAATTA+GGG | - | chr8_1:49793139-49793158 | Msa1198360:CDS | 25.0% |
| ! | ATACTTAAATGTAAAGGAAG+GGG | + | chr8_1:49793364-49793383 | None:intergenic | 25.0% |
| ! | ATGTTAAACCAAAAATACCA+AGG | + | chr8_1:49793631-49793650 | None:intergenic | 25.0% |
| !! | GTTAAATTGTTATTGGAAAC+TGG | + | chr8_1:49793696-49793715 | None:intergenic | 25.0% |
| !!! | ATCAACATGCTTTTTGTATT+GGG | - | chr8_1:49793948-49793967 | Msa1198360:intron | 25.0% |
| ! | AAAAATAACCACTTATTAGC+AGG | + | chr8_1:49794338-49794357 | None:intergenic | 25.0% |
| !! | CTATTGATGGATAAAACATT+TGG | - | chr8_1:49794452-49794471 | Msa1198360:intron | 25.0% |
| ! | AATAAATTCTGCATACATTG+AGG | - | chr8_1:49794508-49794527 | Msa1198360:intron | 25.0% |
| !! | TTCTTTCCTCATCTTTTATT+AGG | - | chr8_1:49794603-49794622 | Msa1198360:intron | 25.0% |
| !! | TATTTTATCATACATACCTC+GGG | + | chr8_1:49794739-49794758 | None:intergenic | 25.0% |
| !!! | ACATGACATTTATTTTGGAA+TGG | + | chr8_1:49794968-49794987 | None:intergenic | 25.0% |
| !! | TGCTAACATGACATTTATTT+TGG | + | chr8_1:49794973-49794992 | None:intergenic | 25.0% |
| ! | AATATTAATTCGGGATAAAC+TGG | + | chr8_1:49795055-49795074 | None:intergenic | 25.0% |
| ! | TGATGCACTCAATATTAATT+CGG | + | chr8_1:49795065-49795084 | None:intergenic | 25.0% |
| !! | TGTTATTTATAAGCTTGTCA+AGG | + | chr8_1:49795369-49795388 | None:intergenic | 25.0% |
| ! | CAAAAATAAGCCAATTCAAA+CGG | - | chr8_1:49795418-49795437 | Msa1198360:intron | 25.0% |
| ! | AAAAATAAGCCAATTCAAAC+GGG | - | chr8_1:49795419-49795438 | Msa1198360:intron | 25.0% |
| !! | ACTTTGAACGACATTTATTT+TGG | - | chr8_1:49795454-49795473 | Msa1198360:intron | 25.0% |
| !!! | GAAGTAATCATTTTTTGGTA+AGG | + | chr8_1:49795530-49795549 | None:intergenic | 25.0% |
| !!! | TTTAATTAGTTCTGATCATG+AGG | - | chr8_1:49795937-49795956 | Msa1198360:CDS | 25.0% |
| ! | AATAATTATCAGATGAAGTC+AGG | + | chr8_1:49796592-49796611 | None:intergenic | 25.0% |
| !! | TTTTCCTATGATATACTCTT+TGG | + | chr8_1:49796657-49796676 | None:intergenic | 25.0% |
| ! | AAATAGCTTCAAATTATGTC+CGG | - | chr8_1:49796674-49796693 | Msa1198360:CDS | 25.0% |
| !!! | ATTTTGAGATATGACTGTTT+CGG | + | chr8_1:49796708-49796727 | None:intergenic | 25.0% |
| ! | CAGTCATATCTCAAAATAAT+AGG | - | chr8_1:49796711-49796730 | Msa1198360:CDS | 25.0% |
| ! | CATATCTCAAAATAATAGGA+AGG | - | chr8_1:49796715-49796734 | Msa1198360:CDS | 25.0% |
| ! | ATTTGGTTATTTGTATAGCA+TGG | - | chr8_1:49796758-49796777 | Msa1198360:CDS | 25.0% |
| ! | ACAAATCGATCAATTACAAA+TGG | + | chr8_1:49796864-49796883 | None:intergenic | 25.0% |
| ! | CATTTATGTATCTCATATTG+AGG | - | chr8_1:49796886-49796905 | Msa1198360:five_prime_UTR | 25.0% |
| TTGACTTAGTTATGATATCG+AGG | + | chr8_1:49789958-49789977 | None:intergenic | 30.0% | |
| AACATTCTTGAAAACTCTAC+GGG | + | chr8_1:49790196-49790215 | None:intergenic | 30.0% | |
| CAACATTCTTGAAAACTCTA+CGG | + | chr8_1:49790197-49790216 | None:intergenic | 30.0% | |
| TTGATTTCAATGATCCTGAT+TGG | - | chr8_1:49790256-49790275 | Msa1198360:three_prime_UTR | 30.0% | |
| TGAAACTTGAATTTCCAATC+AGG | + | chr8_1:49790273-49790292 | None:intergenic | 30.0% | |
| AGATATCAGTAATATGAGGA+AGG | + | chr8_1:49790320-49790339 | None:intergenic | 30.0% | |
| GGAAAGATATCAGTAATATG+AGG | + | chr8_1:49790324-49790343 | None:intergenic | 30.0% | |
| !! | ATTCTAAGACAAAAGGTAGA+AGG | + | chr8_1:49790363-49790382 | None:intergenic | 30.0% |
| !! | AAACCTCATTCTAAGACAAA+AGG | + | chr8_1:49790370-49790389 | None:intergenic | 30.0% |
| ! | TACAATGTGTTTGTTGAAGT+TGG | - | chr8_1:49790572-49790591 | Msa1198360:intron | 30.0% |
| TATTTATACACTCAACAGTC+CGG | + | chr8_1:49790651-49790670 | None:intergenic | 30.0% | |
| AAAACACTGTTAAATAGGCT+TGG | + | chr8_1:49790718-49790737 | None:intergenic | 30.0% | |
| TCTTAAAAAATATTGGGGAG+GGG | - | chr8_1:49790740-49790759 | Msa1198360:intron | 30.0% | |
| TATTCCAGGTCATTATACAT+TGG | - | chr8_1:49790950-49790969 | Msa1198360:intron | 30.0% | |
| GTTGGAGTCAAAATCTTAAA+TGG | - | chr8_1:49791266-49791285 | Msa1198360:CDS | 30.0% | |
| ! | TCATTTCTAGAAATATGACC+TGG | - | chr8_1:49791419-49791438 | Msa1198360:intron | 30.0% |
| AATGGATCTTGGATAATTTC+AGG | + | chr8_1:49791524-49791543 | None:intergenic | 30.0% | |
| GTTACGTTGAGTTAAAACTT+AGG | - | chr8_1:49791696-49791715 | Msa1198360:intron | 30.0% | |
| TTAGTGTTTATTCTCACACT+TGG | - | chr8_1:49791758-49791777 | Msa1198360:intron | 30.0% | |
| CTAAGATGCAAGACAAAATA+TGG | + | chr8_1:49792118-49792137 | None:intergenic | 30.0% | |
| ! | ATTTTGTCTTGCATCTTAGA+AGG | - | chr8_1:49792119-49792138 | Msa1198360:intron | 30.0% |
| AAGTTGTACTAAAATCACGT+TGG | - | chr8_1:49792213-49792232 | Msa1198360:CDS | 30.0% | |
| ! | CTGAATTCTGATAACCATTT+TGG | - | chr8_1:49792274-49792293 | Msa1198360:intron | 30.0% |
| ATCAAAAGTGAAGACCAAAA+TGG | + | chr8_1:49792291-49792310 | None:intergenic | 30.0% | |
| ! | TGATGTTTTCTTGTATGTTC+TGG | - | chr8_1:49792307-49792326 | Msa1198360:intron | 30.0% |
| AGAATTCAATCAACCAAGAA+GGG | + | chr8_1:49792349-49792368 | None:intergenic | 30.0% | |
| TACATTCATCAAGATGATAG+TGG | + | chr8_1:49792414-49792433 | None:intergenic | 30.0% | |
| AATTATCGTATCAGATTTCC+AGG | + | chr8_1:49792496-49792515 | None:intergenic | 30.0% | |
| ! | TGAAGTCCATCAAATTTTGT+CGG | + | chr8_1:49792550-49792569 | None:intergenic | 30.0% |
| !! | ACAAAATTTGATGGACTTCA+GGG | - | chr8_1:49792550-49792569 | Msa1198360:intron | 30.0% |
| TAGTTATCAAAGAAGCTCTA+AGG | + | chr8_1:49792593-49792612 | None:intergenic | 30.0% | |
| !!! | TCAGATAGTTGTTACTTTTG+AGG | - | chr8_1:49792631-49792650 | Msa1198360:intron | 30.0% |
| !!! | CAGATAGTTGTTACTTTTGA+GGG | - | chr8_1:49792632-49792651 | Msa1198360:intron | 30.0% |
| !!! | AGATAGTTGTTACTTTTGAG+GGG | - | chr8_1:49792633-49792652 | Msa1198360:intron | 30.0% |
| ATAAAAAAAAAAGGGCAACC+CGG | + | chr8_1:49792820-49792839 | None:intergenic | 30.0% | |
| TGAGTTGTTGAAATCTTTCT+AGG | - | chr8_1:49792933-49792952 | Msa1198360:CDS | 30.0% | |
| GAGTTGTTGAAATCTTTCTA+GGG | - | chr8_1:49792934-49792953 | Msa1198360:CDS | 30.0% | |
| CTATAAACCAGAAGATGTAA+AGG | - | chr8_1:49792988-49793007 | Msa1198360:intron | 30.0% | |
| CGTGCATTGGAATTTAAATT+AGG | - | chr8_1:49793138-49793157 | Msa1198360:CDS | 30.0% | |
| ! | TGTAACACTCTAATTTGTAC+TGG | - | chr8_1:49793180-49793199 | Msa1198360:intron | 30.0% |
| TACTTAAATGTAAAGGAAGG+GGG | + | chr8_1:49793363-49793382 | None:intergenic | 30.0% | |
| ATATGGTGTGAAAAAGATAG+TGG | - | chr8_1:49793534-49793553 | Msa1198360:intron | 30.0% | |
| TATGGTGTGAAAAAGATAGT+GGG | - | chr8_1:49793535-49793554 | Msa1198360:intron | 30.0% | |
| TAAACCAAAAATACCAAGGA+CGG | + | chr8_1:49793627-49793646 | None:intergenic | 30.0% | |
| GTTCAGAATATTCATCTATC+TGG | - | chr8_1:49793753-49793772 | Msa1198360:intron | 30.0% | |
| TTCACACAAAATCATCAAGT+AGG | + | chr8_1:49793870-49793889 | None:intergenic | 30.0% | |
| ! | TGATGATTTTGTGTGAATCA+TGG | - | chr8_1:49793873-49793892 | Msa1198360:CDS | 30.0% |
| !! | ATTATTGATTTGTAGGAGAG+AGG | - | chr8_1:49793924-49793943 | Msa1198360:CDS | 30.0% |
| CAATGACAATGACATTAGTT+CGG | - | chr8_1:49794181-49794200 | Msa1198360:intron | 30.0% | |
| ATCACACATAATGCACATTT+GGG | + | chr8_1:49794255-49794274 | None:intergenic | 30.0% | |
| TATCACACATAATGCACATT+TGG | + | chr8_1:49794256-49794275 | None:intergenic | 30.0% | |
| TATGTGCCTAATAAAAGATG+AGG | + | chr8_1:49794612-49794631 | None:intergenic | 30.0% | |
| ATAGTGCATATCATGGAATT+GGG | - | chr8_1:49794629-49794648 | Msa1198360:intron | 30.0% | |
| TGTATCAGTTTATCAGTATG+AGG | + | chr8_1:49794784-49794803 | None:intergenic | 30.0% | |
| ! | AAGGTACCTTTCAATTTACA+TGG | - | chr8_1:49794822-49794841 | Msa1198360:intron | 30.0% |
| !!! | GACATTTATTTTGGAATGGA+GGG | + | chr8_1:49794964-49794983 | None:intergenic | 30.0% |
| !!! | TGACATTTATTTTGGAATGG+AGG | + | chr8_1:49794965-49794984 | None:intergenic | 30.0% |
| GATGCACTCAATATTAATTC+GGG | + | chr8_1:49795064-49795083 | None:intergenic | 30.0% | |
| ATTTATAAGCTTGTCAAGGT+AGG | + | chr8_1:49795365-49795384 | None:intergenic | 30.0% | |
| !!! | CGACATTTATTTTGGAAAGT+AGG | - | chr8_1:49795462-49795481 | Msa1198360:intron | 30.0% |
| !!! | TTCTAAGCCATGTTATTTTC+AGG | - | chr8_1:49795495-49795514 | Msa1198360:intron | 30.0% |
| !!! | CATGTTATTTTCAGGTCATA+GGG | - | chr8_1:49795503-49795522 | Msa1198360:intron | 30.0% |
| AAACATAGAAACTAGCTAAC+TGG | - | chr8_1:49795551-49795570 | Msa1198360:intron | 30.0% | |
| TCATCATATATCAACCCATT+TGG | + | chr8_1:49795708-49795727 | None:intergenic | 30.0% | |
| !! | AATGGGTTGATATATGATGA+TGG | - | chr8_1:49795708-49795727 | Msa1198360:intron | 30.0% |
| AAGCACAAAATCGATATAGT+TGG | + | chr8_1:49796328-49796347 | None:intergenic | 30.0% | |
| TTACACTTTCCAATAAAGTC+AGG | - | chr8_1:49796611-49796630 | Msa1198360:CDS | 30.0% | |
| ! | ACTTCCAAAGAGTATATCAT+AGG | - | chr8_1:49796650-49796669 | Msa1198360:CDS | 30.0% |
| ! | AATGTTAATTTGAATGCTGC+AGG | + | chr8_1:49796800-49796819 | None:intergenic | 30.0% |
| TGATTGAATGTGAGAGATGA+AGG | + | chr8_1:49790045-49790064 | None:intergenic | 35.0% | |
| TCAGATTTCACACTCTTCAA+TGG | - | chr8_1:49790068-49790087 | Msa1198360:three_prime_UTR | 35.0% | |
| !! | CGTAGAGTTTTCAAGAATGT+TGG | - | chr8_1:49790195-49790214 | Msa1198360:three_prime_UTR | 35.0% |
| AGACAAAAGGTAGAAGGAAT+AGG | + | chr8_1:49790357-49790376 | None:intergenic | 35.0% | |
| ! | CTACCTTTTGTCTTAGAATG+AGG | - | chr8_1:49790364-49790383 | Msa1198360:CDS | 35.0% |
| ACTTTCAATCTTACGAAGCA+CGG | - | chr8_1:49790420-49790439 | Msa1198360:CDS | 35.0% | |
| ATTTATACACTCAACAGTCC+GGG | + | chr8_1:49790650-49790669 | None:intergenic | 35.0% | |
| AAAGCTAGCTCGAAGAATAA+GGG | + | chr8_1:49790684-49790703 | None:intergenic | 35.0% | |
| AAAAGCTAGCTCGAAGAATA+AGG | + | chr8_1:49790685-49790704 | None:intergenic | 35.0% | |
| !!! | TTATTCTTCGAGCTAGCTTT+TGG | - | chr8_1:49790684-49790703 | Msa1198360:CDS | 35.0% |
| AAAACAAATCTCCTCAGGAA+GGG | + | chr8_1:49790810-49790829 | None:intergenic | 35.0% | |
| AAAAACAAATCTCCTCAGGA+AGG | + | chr8_1:49790811-49790830 | None:intergenic | 35.0% | |
| TCTCAAAAACAAATCTCCTC+AGG | + | chr8_1:49790815-49790834 | None:intergenic | 35.0% | |
| TATATTAGGTGCTAGAACAG+TGG | + | chr8_1:49790893-49790912 | None:intergenic | 35.0% | |
| ! | TTTTGTGATAGAACTCCGAT+TGG | - | chr8_1:49790921-49790940 | Msa1198360:intron | 35.0% |
| CCTGGAATATCTTTACCAAT+CGG | + | chr8_1:49790939-49790958 | None:intergenic | 35.0% | |
| TCATCCAATGTATAATGACC+TGG | + | chr8_1:49790957-49790976 | None:intergenic | 35.0% | |
| AGGTCATTATACATTGGATG+AGG | - | chr8_1:49790956-49790975 | Msa1198360:intron | 35.0% | |
| ATTATACATTGGATGAGGAG+TGG | - | chr8_1:49790961-49790980 | Msa1198360:intron | 35.0% | |
| ! | CGAGGATCTAGGATAATATT+CGG | + | chr8_1:49791294-49791313 | None:intergenic | 35.0% |
| AATATTATCCTAGATCCTCG+AGG | - | chr8_1:49791294-49791313 | Msa1198360:CDS | 35.0% | |
| ATATTATCCTAGATCCTCGA+GGG | - | chr8_1:49791295-49791314 | Msa1198360:CDS | 35.0% | |
| AAATCCAAGTCTCGTATATG+TGG | - | chr8_1:49791331-49791350 | Msa1198360:intron | 35.0% | |
| AATTCCACATATACGAGACT+TGG | + | chr8_1:49791338-49791357 | None:intergenic | 35.0% | |
| TCGTATATGTGGAATTCTAG+AGG | - | chr8_1:49791342-49791361 | Msa1198360:intron | 35.0% | |
| ! | TTCTAGAAATATGACCTGGT+AGG | - | chr8_1:49791423-49791442 | Msa1198360:intron | 35.0% |
| TCTAGAAATATGACCTGGTA+GGG | - | chr8_1:49791424-49791443 | Msa1198360:intron | 35.0% | |
| TAAACTTTATAAGCCCTACC+AGG | + | chr8_1:49791440-49791459 | None:intergenic | 35.0% | |
| ATCTCACAAACCAAGTTCTA+AGG | + | chr8_1:49791474-49791493 | None:intergenic | 35.0% | |
| AGTTAGACTGATCCCTAAAA+TGG | - | chr8_1:49791496-49791515 | Msa1198360:intron | 35.0% | |
| AAAAAACTCAAGTCTCACAC+TGG | - | chr8_1:49791609-49791628 | Msa1198360:intron | 35.0% | |
| GCAAGAGATTGAACCTAAAT+AGG | - | chr8_1:49791631-49791650 | Msa1198360:intron | 35.0% | |
| ! | TAAAACTTAGGTTGTGCTAG+TGG | - | chr8_1:49791708-49791727 | Msa1198360:intron | 35.0% |
| !!! | TGTTGATTTTCCATTTGCTC+TGG | - | chr8_1:49791945-49791964 | Msa1198360:intron | 35.0% |
| TTGTTCTACCCAAGTACAAT+CGG | + | chr8_1:49792028-49792047 | None:intergenic | 35.0% | |
| ATTGTACTTGGGTAGAACAA+TGG | - | chr8_1:49792028-49792047 | Msa1198360:intron | 35.0% | |
| ! | TAGGTTTGAAATGCCATTCA+GGG | - | chr8_1:49792142-49792161 | Msa1198360:intron | 35.0% |
| GAAAATTTACATCCCCTGAA+TGG | + | chr8_1:49792158-49792177 | None:intergenic | 35.0% | |
| CACGTTGGATGTAATATTAG+TGG | - | chr8_1:49792228-49792247 | Msa1198360:CDS | 35.0% | |
| GAGAATTCAATCAACCAAGA+AGG | + | chr8_1:49792350-49792369 | None:intergenic | 35.0% | |
| AATATTACTTTAGCAGAGCC+TGG | - | chr8_1:49792475-49792494 | Msa1198360:CDS | 35.0% | |
| !!! | CCATCAAATTTTGTCGGTTT+TGG | + | chr8_1:49792544-49792563 | None:intergenic | 35.0% |
| CCAAAACCGACAAAATTTGA+TGG | - | chr8_1:49792541-49792560 | Msa1198360:intron | 35.0% | |
| !! | GACAAAATTTGATGGACTTC+AGG | - | chr8_1:49792549-49792568 | Msa1198360:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr8_1:49792729-49792748 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr8_1:49792728-49792747 | Msa1198360:intron | 35.0% | |
| TGATGACATCATTAAGACCA+GGG | + | chr8_1:49793042-49793061 | None:intergenic | 35.0% | |
| TCTTAATGATGTCATCAGAC+AGG | - | chr8_1:49793045-49793064 | Msa1198360:intron | 35.0% | |
| AGTTAGTTGGTCAATAGCTT+AGG | + | chr8_1:49793285-49793304 | None:intergenic | 35.0% | |
| TAGCACTACGATTAAATGTG+AGG | + | chr8_1:49793436-49793455 | None:intergenic | 35.0% | |
| GATTGCTCAAGTAATGAATG+CGG | - | chr8_1:49793486-49793505 | Msa1198360:intron | 35.0% | |
| ATGGTGTGAAAAAGATAGTG+GGG | - | chr8_1:49793536-49793555 | Msa1198360:intron | 35.0% | |
| CAGAATATTCATCTATCTGG+TGG | - | chr8_1:49793756-49793775 | Msa1198360:intron | 35.0% | |
| TAGTGATATCGTGGATAGTT+TGG | - | chr8_1:49793815-49793834 | Msa1198360:intron | 35.0% | |
| !! | AACATGCTTTTTGTATTGGG+TGG | - | chr8_1:49793951-49793970 | Msa1198360:intron | 35.0% |
| ! | CTTTTTGTATTGGGTGGAAA+TGG | - | chr8_1:49793957-49793976 | Msa1198360:intron | 35.0% |
| TGCAAATGCAATTCACAATG+AGG | - | chr8_1:49793992-49794011 | Msa1198360:intron | 35.0% | |
| !! | CAGAAAGGTATTGTAAGTCA+AGG | + | chr8_1:49794154-49794173 | None:intergenic | 35.0% |
| TGTCATTGTCAACAACAGAA+AGG | + | chr8_1:49794169-49794188 | None:intergenic | 35.0% | |
| ATGCTTATCCTGCTAATAAG+TGG | - | chr8_1:49794327-49794346 | Msa1198360:intron | 35.0% | |
| ! | TCTTTTAGTGCTGCAAAAGA+CGG | - | chr8_1:49794381-49794400 | Msa1198360:intron | 35.0% |
| CATAGTGCATATCATGGAAT+TGG | - | chr8_1:49794628-49794647 | Msa1198360:intron | 35.0% | |
| TAGTGCATATCATGGAATTG+GGG | - | chr8_1:49794630-49794649 | Msa1198360:intron | 35.0% | |
| ! | TCAGTACCTTCTAGAAATGA+AGG | - | chr8_1:49794869-49794888 | Msa1198360:CDS | 35.0% |
| ! | CAGTACCTTCTAGAAATGAA+GGG | - | chr8_1:49794870-49794889 | Msa1198360:CDS | 35.0% |
| CCTATGACCTGAAAATAACA+TGG | + | chr8_1:49795505-49795524 | None:intergenic | 35.0% | |
| !!! | CCATGTTATTTTCAGGTCAT+AGG | - | chr8_1:49795502-49795521 | Msa1198360:intron | 35.0% |
| GCATCGGGAAATATTGTATT+TGG | - | chr8_1:49795620-49795639 | Msa1198360:intron | 35.0% | |
| CGGTGTATATATTCAACAAG+AGG | - | chr8_1:49795649-49795668 | Msa1198360:intron | 35.0% | |
| GTGCTCAAAGTAAACCAAAT+GGG | - | chr8_1:49795691-49795710 | Msa1198360:intron | 35.0% | |
| TAGAACCACACTAAGAAACA+AGG | + | chr8_1:49796024-49796043 | None:intergenic | 35.0% | |
| ! | TGTTTCTTAGTGTGGTTCTA+TGG | - | chr8_1:49796024-49796043 | Msa1198360:intron | 35.0% |
| CGCTTTGATTCACTTTGTTA+CGG | + | chr8_1:49796076-49796095 | None:intergenic | 35.0% | |
| ! | GTCTGAAATACAAAAGTTGC+AGG | + | chr8_1:49796162-49796181 | None:intergenic | 35.0% |
| ! | GGAATTTTATGCACTGTACT+TGG | - | chr8_1:49796276-49796295 | Msa1198360:intron | 35.0% |
| ! | GATTCACTCTTTTGCATTTC+AGG | - | chr8_1:49796414-49796433 | Msa1198360:intron | 35.0% |
| !!! | TCTTTTGCATTTCAGGTTCA+TGG | - | chr8_1:49796421-49796440 | Msa1198360:intron | 35.0% |
| ATTATCAGATGAAGTCAGGT+TGG | + | chr8_1:49796588-49796607 | None:intergenic | 35.0% | |
| AATGTGAGAGATGAAGGTGA+AGG | + | chr8_1:49790039-49790058 | None:intergenic | 40.0% | |
| AGAGTGTGAGTATAGAGGAA+CGG | + | chr8_1:49790161-49790180 | None:intergenic | 40.0% | |
| AGAAGGAATAGGAGGAGAAT+CGG | + | chr8_1:49790346-49790365 | None:intergenic | 40.0% | |
| CAAAAGGTAGAAGGAATAGG+AGG | + | chr8_1:49790354-49790373 | None:intergenic | 40.0% | |
| CCGATTGGTAAAGATATTCC+AGG | - | chr8_1:49790936-49790955 | Msa1198360:intron | 40.0% | |
| ! | CAATGATAGAGTGCTTCTCA+AGG | - | chr8_1:49791001-49791020 | Msa1198360:intron | 40.0% |
| ! | CTGATTTTGTCGGATCAAGT+TGG | - | chr8_1:49791248-49791267 | Msa1198360:CDS | 40.0% |
| TATTATCCTAGATCCTCGAG+GGG | - | chr8_1:49791296-49791315 | Msa1198360:CDS | 40.0% | |
| ! | TCTAGAGGTATGACCTGATA+TGG | - | chr8_1:49791357-49791376 | Msa1198360:intron | 40.0% |
| ! | ATAAAGTTTAGGGGTGCAGT+AGG | - | chr8_1:49791383-49791402 | Msa1198360:intron | 40.0% |
| ! | TAAAGTTTAGGGGTGCAGTA+GGG | - | chr8_1:49791384-49791403 | Msa1198360:intron | 40.0% |
| TAATACCAGTGGCCCAATAA+TGG | + | chr8_1:49791542-49791561 | None:intergenic | 40.0% | |
| ATGTGCGTAGATAATACCAG+TGG | + | chr8_1:49791553-49791572 | None:intergenic | 40.0% | |
| ACTGGTATTATCTACGCACA+TGG | - | chr8_1:49791552-49791571 | Msa1198360:intron | 40.0% | |
| AATACATCCCCTCACATGTA+GGG | + | chr8_1:49791586-49791605 | None:intergenic | 40.0% | |
| TTACAGAAGACGTCAATACC+AGG | + | chr8_1:49791820-49791839 | None:intergenic | 40.0% | |
| TATTCATCGCCTAAATCTGC+TGG | - | chr8_1:49791985-49792004 | Msa1198360:intron | 40.0% | |
| TGTTCTACCCAAGTACAATC+GGG | + | chr8_1:49792027-49792046 | None:intergenic | 40.0% | |
| TGTCTTGCATCTTAGAAGGT+AGG | - | chr8_1:49792123-49792142 | Msa1198360:intron | 40.0% | |
| ! | GTAGGTTTGAAATGCCATTC+AGG | - | chr8_1:49792141-49792160 | Msa1198360:intron | 40.0% |
| ! | AGGTTTGAAATGCCATTCAG+GGG | - | chr8_1:49792143-49792162 | Msa1198360:intron | 40.0% |
| !! | TTACTTTTGAGGGGTAACCT+TGG | - | chr8_1:49792642-49792661 | Msa1198360:intron | 40.0% |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr8_1:49792678-49792697 | Msa1198360:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr8_1:49792722-49792741 | Msa1198360:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr8_1:49792723-49792742 | Msa1198360:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr8_1:49792754-49792773 | Msa1198360:intron | 40.0% | |
| ATTGCTGCCTTTACATCTTC+TGG | + | chr8_1:49792998-49793017 | None:intergenic | 40.0% | |
| CTGATGACATCATTAAGACC+AGG | + | chr8_1:49793043-49793062 | None:intergenic | 40.0% | |
| ! | GTGAAGTTTTACACGTGCAT+TGG | - | chr8_1:49793125-49793144 | Msa1198360:CDS | 40.0% |
| TAAATGTAAAGGAAGGGGGA+GGG | + | chr8_1:49793359-49793378 | None:intergenic | 40.0% | |
| TTAAATGTAAAGGAAGGGGG+AGG | + | chr8_1:49793360-49793379 | None:intergenic | 40.0% | |
| !! | AAGATAGTGGGGATTCCTTT+CGG | - | chr8_1:49793547-49793566 | Msa1198360:intron | 40.0% |
| GAAAATCCACGATAACCGAA+AGG | + | chr8_1:49793565-49793584 | None:intergenic | 40.0% | |
| ! | CAAAGAATTGACAGAAGTGC+CGG | - | chr8_1:49793588-49793607 | Msa1198360:intron | 40.0% |
| TGATATCGTGGATAGTTTGG+AGG | - | chr8_1:49793818-49793837 | Msa1198360:intron | 40.0% | |
| CATCAGTCAATGCTTCAGTT+TGG | - | chr8_1:49794035-49794054 | Msa1198360:intron | 40.0% | |
| !! | ATTTGGCTTTGATACTGCAG+TGG | - | chr8_1:49794469-49794488 | Msa1198360:intron | 40.0% |
| TAGGCACATAGTGCATATCA+TGG | - | chr8_1:49794622-49794641 | Msa1198360:intron | 40.0% | |
| AATTGGGGTTGTGAAGTTGA+TGG | - | chr8_1:49794645-49794664 | Msa1198360:intron | 40.0% | |
| ! | ATTGGGGTTGTGAAGTTGAT+GGG | - | chr8_1:49794646-49794665 | Msa1198360:intron | 40.0% |
| TTGCAATGAACCCACTACTA+CGG | + | chr8_1:49794672-49794691 | None:intergenic | 40.0% | |
| TGAGGGCCATGTAAATTGAA+AGG | + | chr8_1:49794831-49794850 | None:intergenic | 40.0% | |
| TTCAATTTACATGGCCCTCA+TGG | - | chr8_1:49794831-49794850 | Msa1198360:intron | 40.0% | |
| TTCTCATAGCCCGTTTGAAT+TGG | + | chr8_1:49795431-49795450 | None:intergenic | 40.0% | |
| CACCAATGCTAAAGATGCAT+CGG | - | chr8_1:49795604-49795623 | Msa1198360:intron | 40.0% | |
| ACCAATGCTAAAGATGCATC+GGG | - | chr8_1:49795605-49795624 | Msa1198360:intron | 40.0% | |
| GGTGCTCAAAGTAAACCAAA+TGG | - | chr8_1:49795690-49795709 | Msa1198360:intron | 40.0% | |
| GTTCTGCATACATTGAGCTA+CGG | + | chr8_1:49795844-49795863 | None:intergenic | 40.0% | |
| !! | CTAAGCCTTGTTTCTTAGTG+TGG | - | chr8_1:49796016-49796035 | Msa1198360:intron | 40.0% |
| CATGCACGGATCATATATGT+TGG | + | chr8_1:49796237-49796256 | None:intergenic | 40.0% | |
| ACACATTCAGCTTCATATGC+AGG | + | chr8_1:49796388-49796407 | None:intergenic | 40.0% | |
| CATCGATGCTTAACTTCAAC+CGG | - | chr8_1:49796562-49796581 | Msa1198360:CDS | 40.0% | |
| CACTTTCCAATAAAGTCAGG+AGG | - | chr8_1:49796614-49796633 | Msa1198360:CDS | 40.0% | |
| CCAAAACCTCCTGACTTTAT+TGG | + | chr8_1:49796623-49796642 | None:intergenic | 40.0% | |
| ! | CCAATAAAGTCAGGAGGTTT+TGG | - | chr8_1:49796620-49796639 | Msa1198360:CDS | 40.0% |
| GAGAGATGAAGGTGAAGGAT+CGG | + | chr8_1:49790034-49790053 | None:intergenic | 45.0% | |
| TGGTGAGGAAGGTTAAGGTA+GGG | + | chr8_1:49790129-49790148 | None:intergenic | 45.0% | |
| TTGGTGAGGAAGGTTAAGGT+AGG | + | chr8_1:49790130-49790149 | None:intergenic | 45.0% | |
| ! | GAGTTTGGTGAGGAAGGTTA+AGG | + | chr8_1:49790134-49790153 | None:intergenic | 45.0% |
| ! | TAGAGGAACGGGTTTGAGTT+TGG | + | chr8_1:49790149-49790168 | None:intergenic | 45.0% |
| GAGTGTGAGTATAGAGGAAC+GGG | + | chr8_1:49790160-49790179 | None:intergenic | 45.0% | |
| ! | GTGAGAGAGTGTGAGTATAG+AGG | + | chr8_1:49790166-49790185 | None:intergenic | 45.0% |
| CTTGAAAACTCTACGGGAGT+TGG | + | chr8_1:49790190-49790209 | None:intergenic | 45.0% | |
| GAAGGAATAGGAGGAGAATC+GGG | + | chr8_1:49790345-49790364 | None:intergenic | 45.0% | |
| ! | TCGTTTTACAACCCTTCCTG+AGG | - | chr8_1:49790796-49790815 | Msa1198360:intron | 45.0% |
| ACATTGGATGAGGAGTGGAA+TGG | - | chr8_1:49790966-49790985 | Msa1198360:intron | 45.0% | |
| ATTATCCTAGATCCTCGAGG+GGG | - | chr8_1:49791297-49791316 | Msa1198360:CDS | 45.0% | |
| !! | AGTGGCCCAATAATGGATCT+TGG | + | chr8_1:49791535-49791554 | None:intergenic | 45.0% |
| AAGATCCATTATTGGGCCAC+TGG | - | chr8_1:49791534-49791553 | Msa1198360:intron | 45.0% | |
| GAATACATCCCCTCACATGT+AGG | + | chr8_1:49791587-49791606 | None:intergenic | 45.0% | |
| GTCTGAAAGACCAGAGCAAA+TGG | + | chr8_1:49791958-49791977 | None:intergenic | 45.0% | |
| CATTGACCCCGATTGTACTT+GGG | - | chr8_1:49792017-49792036 | Msa1198360:intron | 45.0% | |
| GTTCTACCCAAGTACAATCG+GGG | + | chr8_1:49792026-49792045 | None:intergenic | 45.0% | |
| AAATTGCAGTCAGCCCTTCT+TGG | - | chr8_1:49792333-49792352 | Msa1198360:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr8_1:49792684-49792703 | Msa1198360:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr8_1:49792685-49792704 | Msa1198360:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr8_1:49792718-49792737 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | - | chr8_1:49792750-49792769 | Msa1198360:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr8_1:49792753-49792772 | Msa1198360:intron | 45.0% | |
| !! | TTTCTAGGGTTCATCGAGCT+GGG | - | chr8_1:49792948-49792967 | Msa1198360:CDS | 45.0% |
| AAGGCAGCAATTGTCACATG+TGG | - | chr8_1:49793007-49793026 | Msa1198360:intron | 45.0% | |
| CAGCAATTGTCACATGTGGA+GGG | - | chr8_1:49793011-49793030 | Msa1198360:intron | 45.0% | |
| AAATGTAAAGGAAGGGGGAG+GGG | + | chr8_1:49793358-49793377 | None:intergenic | 45.0% | |
| ACCAAAAATACCAAGGACGG+AGG | + | chr8_1:49793624-49793643 | None:intergenic | 45.0% | |
| ! | ACTTTTCTCGACAGCTGTGA+AGG | + | chr8_1:49793732-49793751 | None:intergenic | 45.0% |
| TTCACAGCTGTCGAGAAAAG+TGG | - | chr8_1:49793731-49793750 | Msa1198360:intron | 45.0% | |
| ACCTGGAGTTAGTGATATCG+TGG | - | chr8_1:49793806-49793825 | Msa1198360:intron | 45.0% | |
| TCCACGATATCACTAACTCC+AGG | + | chr8_1:49793810-49793829 | None:intergenic | 45.0% | |
| ATTGACTGATGCAAGGCTAG+AGG | + | chr8_1:49794026-49794045 | None:intergenic | 45.0% | |
| !! | CTGAAGCATTGACTGATGCA+AGG | + | chr8_1:49794033-49794052 | None:intergenic | 45.0% |
| CGGCTCAAGATGTCTATCAT+TGG | - | chr8_1:49794401-49794420 | Msa1198360:intron | 45.0% | |
| TGCAGTGGAAGAAGCTCAAA+GGG | - | chr8_1:49794484-49794503 | Msa1198360:intron | 45.0% | |
| !! | TAGTGGGTTCATTGCAATGC+AGG | - | chr8_1:49794675-49794694 | Msa1198360:intron | 45.0% |
| GTCAACCTGTCCACTAGATA+GGG | + | chr8_1:49794704-49794723 | None:intergenic | 45.0% | |
| GATGCCTCAAAACACCATGA+GGG | + | chr8_1:49794848-49794867 | None:intergenic | 45.0% | |
| AGATGCCTCAAAACACCATG+AGG | + | chr8_1:49794849-49794868 | None:intergenic | 45.0% | |
| ! | CGGATCCCTTCATTTCTAGA+AGG | + | chr8_1:49794878-49794897 | None:intergenic | 45.0% |
| ! | TGTTTTTCTTAGGGCGCGTT+TGG | - | chr8_1:49795228-49795247 | Msa1198360:intron | 45.0% |
| TCCCGATGCATCTTTAGCAT+TGG | + | chr8_1:49795609-49795628 | None:intergenic | 45.0% | |
| ATGCATTTGCTCGACATGCA+CGG | + | chr8_1:49796251-49796270 | None:intergenic | 45.0% | |
| TGTCGAGCAAATGCATCAGA+TGG | - | chr8_1:49796255-49796274 | Msa1198360:intron | 45.0% | |
| !! | GGAAAGTATTGTGTGCTTGG+TGG | + | chr8_1:49796367-49796386 | None:intergenic | 45.0% |
| !! | GCAGGAAAGTATTGTGTGCT+TGG | + | chr8_1:49796370-49796389 | None:intergenic | 45.0% |
| TGCGATATTACTTCGGGGAT+GGG | + | chr8_1:49796508-49796527 | None:intergenic | 45.0% | |
| ATGCGATATTACTTCGGGGA+TGG | + | chr8_1:49796509-49796528 | None:intergenic | 45.0% | |
| TCGGGGATGCGATATTACTT+CGG | + | chr8_1:49796515-49796534 | None:intergenic | 45.0% | |
| AGTAATATCGCATCCCCGAT+TGG | - | chr8_1:49796516-49796535 | Msa1198360:intron | 45.0% | |
| GACTGTTTCGGCAAATTTGC+CGG | + | chr8_1:49796696-49796715 | None:intergenic | 45.0% | |
| !!! | TTTTTATCTTAAAAAATATT+GGG | - | chr8_1:49790734-49790753 | Msa1198360:intron | 5.0% |
| !!! | AGTTTTTTTTTTTTTTTTTT+GGG | + | chr8_1:49795093-49795112 | None:intergenic | 5.0% |
| !!! | TAGTTTTTTTTTTTTTTTTT+TGG | + | chr8_1:49795094-49795113 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAACTAAAAA+AGG | - | chr8_1:49795098-49795117 | Msa1198360:intron | 5.0% |
| GATGAAGGTGAAGGATCGGT+CGG | + | chr8_1:49790030-49790049 | None:intergenic | 50.0% | |
| AAGGTTAAGGTAGGGGTTGG+TGG | + | chr8_1:49790121-49790140 | None:intergenic | 50.0% | |
| AGGAAGGTTAAGGTAGGGGT+TGG | + | chr8_1:49790124-49790143 | None:intergenic | 50.0% | |
| GGTGAGGAAGGTTAAGGTAG+GGG | + | chr8_1:49790128-49790147 | None:intergenic | 50.0% | |
| ! | GGGTTTGAGTTTGGTGAGGA+AGG | + | chr8_1:49790140-49790159 | None:intergenic | 50.0% |
| ! | GAACGGGTTTGAGTTTGGTG+AGG | + | chr8_1:49790144-49790163 | None:intergenic | 50.0% |
| CACAGACACTAGACACGTCA+CGG | - | chr8_1:49790444-49790463 | Msa1198360:CDS | 50.0% | |
| TTGTTAGTCCCACATCGCTC+AGG | - | chr8_1:49790617-49790636 | Msa1198360:CDS | 50.0% | |
| GAAGAGAACCTGAGCGATGT+GGG | + | chr8_1:49790628-49790647 | None:intergenic | 50.0% | |
| TTATCCTAGATCCTCGAGGG+GGG | - | chr8_1:49791298-49791317 | Msa1198360:CDS | 50.0% | |
| CCCTCACATGTAGGGTCTTT+GGG | + | chr8_1:49791578-49791597 | None:intergenic | 50.0% | |
| CCCAAAGACCCTACATGTGA+GGG | - | chr8_1:49791575-49791594 | Msa1198360:intron | 50.0% | |
| CCAAAGACCCTACATGTGAG+GGG | - | chr8_1:49791576-49791595 | Msa1198360:intron | 50.0% | |
| CACTCAGCACCAGCAGATTT+AGG | + | chr8_1:49791997-49792016 | None:intergenic | 50.0% | |
| ! | GCATTGACCCCGATTGTACT+TGG | - | chr8_1:49792016-49792035 | Msa1198360:intron | 50.0% |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8_1:49792662-49792681 | None:intergenic | 50.0% | |
| !! | CTTTCTAGGGTTCATCGAGC+TGG | - | chr8_1:49792947-49792966 | Msa1198360:CDS | 50.0% |
| GCAGCAATTGTCACATGTGG+AGG | - | chr8_1:49793010-49793029 | Msa1198360:intron | 50.0% | |
| GGGATTCCTTTCGGTTATCG+TGG | - | chr8_1:49793556-49793575 | Msa1198360:intron | 50.0% | |
| TAATCTTGTGCCTCCGTCCT+TGG | - | chr8_1:49793611-49793630 | Msa1198360:intron | 50.0% | |
| ! | GCCTCCGTCCTTGGTATTTT+TGG | - | chr8_1:49793620-49793639 | Msa1198360:intron | 50.0% |
| TCTATCTGGTGGAAGCCTGT+TGG | - | chr8_1:49793767-49793786 | Msa1198360:intron | 50.0% | |
| CTATCTGGTGGAAGCCTGTT+GGG | - | chr8_1:49793768-49793787 | Msa1198360:intron | 50.0% | |
| CTGCAGTGGAAGAAGCTCAA+AGG | - | chr8_1:49794483-49794502 | Msa1198360:intron | 50.0% | |
| !! | AAGTTGATGGGCCGTAGTAG+TGG | - | chr8_1:49794658-49794677 | Msa1198360:intron | 50.0% |
| !! | AGTTGATGGGCCGTAGTAGT+GGG | - | chr8_1:49794659-49794678 | Msa1198360:intron | 50.0% |
| ATGCAGGCTTCCCTATCTAG+TGG | - | chr8_1:49794691-49794710 | Msa1198360:intron | 50.0% | |
| CGTCAACCTGTCCACTAGAT+AGG | + | chr8_1:49794705-49794724 | None:intergenic | 50.0% | |
| TGACGTATGTCTGATTCCCG+AGG | - | chr8_1:49794720-49794739 | Msa1198360:intron | 50.0% | |
| ! | ATGGCCCTCATGGTGTTTTG+AGG | - | chr8_1:49794841-49794860 | Msa1198360:intron | 50.0% |
| TCCTTCTGCCACACAGACTA+CGG | + | chr8_1:49794901-49794920 | None:intergenic | 50.0% | |
| TTCTTAGGGCGCGTTTGGAT+TGG | - | chr8_1:49795233-49795252 | Msa1198360:intron | 50.0% | |
| CAGGTTCATGGTGCATTTGC+AGG | - | chr8_1:49796433-49796452 | Msa1198360:intron | 50.0% | |
| GGTGCATTTGCAGGATACAG+CGG | - | chr8_1:49796442-49796461 | Msa1198360:intron | 50.0% | |
| GGATACAGCGGCATTTCAGT+AGG | - | chr8_1:49796454-49796473 | Msa1198360:intron | 50.0% | |
| GCGATATTACTTCGGGGATG+GGG | + | chr8_1:49796507-49796526 | None:intergenic | 50.0% | |
| GGGGATGCGATATTACTTCG+GGG | + | chr8_1:49796513-49796532 | None:intergenic | 50.0% | |
| CGGGGATGCGATATTACTTC+GGG | + | chr8_1:49796514-49796533 | None:intergenic | 50.0% | |
| AATATCGCATCCCCGATTGG+TGG | - | chr8_1:49796519-49796538 | Msa1198360:intron | 50.0% | |
| GATGCCACATACGACTGTTC+GGG | + | chr8_1:49796546-49796565 | None:intergenic | 50.0% | |
| CGATGCCACATACGACTGTT+CGG | + | chr8_1:49796547-49796566 | None:intergenic | 50.0% | |
| !! | TCAGATGAAGTCAGGTTGGC+CGG | + | chr8_1:49796584-49796603 | None:intergenic | 50.0% |
| AAGGTGAAGGATCGGTCGGA+AGG | + | chr8_1:49790026-49790045 | None:intergenic | 55.0% | |
| !! | GTTAAGGTAGGGGTTGGTGG+TGG | + | chr8_1:49790118-49790137 | None:intergenic | 55.0% |
| CACTAGACACGTCACGGACA+CGG | - | chr8_1:49790450-49790469 | Msa1198360:CDS | 55.0% | |
| GGAAGAGAACCTGAGCGATG+TGG | + | chr8_1:49790629-49790648 | None:intergenic | 55.0% | |
| CATCGCTCAGGTTCTCTTCC+CGG | - | chr8_1:49790629-49790648 | Msa1198360:CDS | 55.0% | |
| TATCCTAGATCCTCGAGGGG+GGG | - | chr8_1:49791299-49791318 | Msa1198360:CDS | 55.0% | |
| GCCCAAAGACCCTACATGTG+AGG | - | chr8_1:49791574-49791593 | Msa1198360:intron | 55.0% | |
| CCCCTCACATGTAGGGTCTT+TGG | + | chr8_1:49791579-49791598 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr8_1:49792697-49792716 | Msa1198360:intron | 55.0% | |
| ! | GGACGGAGGCACAAGATTAC+CGG | + | chr8_1:49793610-49793629 | None:intergenic | 55.0% |
| AGCCTGTTGGGAGTTTCACG+AGG | - | chr8_1:49793780-49793799 | Msa1198360:intron | 55.0% | |
| CTCCTCGTGAAACTCCCAAC+AGG | + | chr8_1:49793785-49793804 | None:intergenic | 55.0% | |
| CTGTTGGGAGTTTCACGAGG+AGG | - | chr8_1:49793783-49793802 | Msa1198360:intron | 55.0% | |
| GGTGGAAATGGCACACATGC+AGG | - | chr8_1:49793969-49793988 | Msa1198360:intron | 55.0% | |
| ! | GGCTTCCCTATCTAGTGGAC+AGG | - | chr8_1:49794696-49794715 | Msa1198360:intron | 55.0% |
| TTCTGCCACACAGACTACGG+CGG | + | chr8_1:49794898-49794917 | None:intergenic | 55.0% | |
| ACTGTTCGGGTCCACCAATC+GGG | + | chr8_1:49796533-49796552 | None:intergenic | 55.0% | |
| GACTGTTCGGGTCCACCAAT+CGG | + | chr8_1:49796534-49796553 | None:intergenic | 55.0% | |
| TGGACCCGAACAGTCGTATG+TGG | - | chr8_1:49796539-49796558 | Msa1198360:CDS | 55.0% | |
| !! | AAGGTAGGGGTTGGTGGTGG+TGG | + | chr8_1:49790115-49790134 | None:intergenic | 60.0% |
| ATCCTCGAGGGGGGGTAGTA+GGG | - | chr8_1:49791307-49791326 | Msa1198360:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8_1:49792651-49792670 | Msa1198360:intron | 60.0% | |
| CAGGAAGGGGTCCCACCATT+TGG | + | chr8_1:49792768-49792787 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+TGG | - | chr8_1:49792766-49792785 | Msa1198360:intron | 60.0% |
| CATACGCAGGGTCCAGGAAG+GGG | + | chr8_1:49792781-49792800 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCCAGGAA+GGG | + | chr8_1:49792782-49792801 | None:intergenic | 60.0% | |
| CTTCCTGGACCCTGCGTATG+CGG | - | chr8_1:49792781-49792800 | Msa1198360:intron | 60.0% | |
| TTCCTGGACCCTGCGTATGC+GGG | - | chr8_1:49792782-49792801 | Msa1198360:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr8_1:49792793-49792812 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr8_1:49792794-49792813 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr8_1:49792798-49792817 | Msa1198360:intron | 60.0% | |
| GGAGTTTCACGAGGAGGACC+TGG | - | chr8_1:49793789-49793808 | Msa1198360:intron | 60.0% | |
| GCCGTAGTCTGTGTGGCAGA+AGG | - | chr8_1:49794897-49794916 | Msa1198360:CDS | 60.0% | |
| GTCTGTGTGGCAGAAGGAGC+TGG | - | chr8_1:49794903-49794922 | Msa1198360:CDS | 60.0% | |
| CTGTTCGGGTCCACCAATCG+GGG | + | chr8_1:49796532-49796551 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGTGATCGCGT+GGG | + | chr8_1:49790103-49790122 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGTGATCGCG+TGG | + | chr8_1:49790104-49790123 | None:intergenic | 65.0% |
| CTACCCCCCCTCGAGGATCT+AGG | + | chr8_1:49791305-49791324 | None:intergenic | 65.0% | |
| GATCCTCGAGGGGGGGTAGT+AGG | - | chr8_1:49791306-49791325 | Msa1198360:intron | 65.0% | |
| TCCTCGAGGGGGGGTAGTAG+GGG | - | chr8_1:49791308-49791327 | Msa1198360:intron | 65.0% | |
| CGCATACGCAGGGTCCAGGA+AGG | + | chr8_1:49792783-49792802 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr8_1:49792799-49792818 | Msa1198360:intron | 65.0% | |
| GGGTTCATCGAGCTGGGCCT+CGG | - | chr8_1:49792954-49792973 | Msa1198360:intron | 65.0% | |
| GGTTCATCGAGCTGGGCCTC+GGG | - | chr8_1:49792955-49792974 | Msa1198360:intron | 65.0% | |
| ACATGTGGAGGGCTCTGCCC+TGG | - | chr8_1:49793022-49793041 | Msa1198360:intron | 65.0% | |
| GGGATCCGCCGTAGTCTGTG+TGG | - | chr8_1:49794890-49794909 | Msa1198360:CDS | 65.0% | |
| TGTGGCAGAAGGAGCTGGCC+AGG | - | chr8_1:49794908-49794927 | Msa1198360:CDS | 65.0% | |
| TCCCCTACTACCCCCCCTCG+AGG | + | chr8_1:49791312-49791331 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+AGG | + | chr8_1:49792787-49792806 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 49789948 | 49796960 | 49789948 | ID=Msa1198360;Name=Msa1198360 |
| chr8_1 | mRNA | 49789948 | 49796960 | 49789948 | ID=Msa1198360-mRNA-1;Parent=Msa1198360;Name=Msa1198360-mRNA-1;_AED=0.13;_eAED=0.13;_QI=139|0.90|1|1|1|1|12|357|494 |
| chr8_1 | exon | 49789948 | 49790472 | 49789948 | ID=Msa1198360-mRNA-1:exon:15660;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49790600 | 49790728 | 49790600 | ID=Msa1198360-mRNA-1:exon:15659;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49791238 | 49791318 | 49791238 | ID=Msa1198360-mRNA-1:exon:15658;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49792167 | 49792283 | 49792167 | ID=Msa1198360-mRNA-1:exon:15657;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49792379 | 49792519 | 49792379 | ID=Msa1198360-mRNA-1:exon:15656;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49792895 | 49792969 | 49792895 | ID=Msa1198360-mRNA-1:exon:15655;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49793069 | 49793170 | 49793069 | ID=Msa1198360-mRNA-1:exon:15654;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49793299 | 49793394 | 49793299 | ID=Msa1198360-mRNA-1:exon:15653;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49793842 | 49793953 | 49793842 | ID=Msa1198360-mRNA-1:exon:15652;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49794859 | 49794932 | 49794859 | ID=Msa1198360-mRNA-1:exon:15651;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49795886 | 49795976 | 49795886 | ID=Msa1198360-mRNA-1:exon:15650;Parent=Msa1198360-mRNA-1 |
| chr8_1 | exon | 49796523 | 49796960 | 49796523 | ID=Msa1198360-mRNA-1:exon:15649;Parent=Msa1198360-mRNA-1 |
| chr8_1 | five_prime_UTR | 49796822 | 49796960 | 49796822 | ID=Msa1198360-mRNA-1:five_prime_utr;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49796523 | 49796821 | 49796523 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49795886 | 49795976 | 49795886 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49794859 | 49794932 | 49794859 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49793842 | 49793953 | 49793842 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49793299 | 49793394 | 49793299 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49793069 | 49793170 | 49793069 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49792895 | 49792969 | 49792895 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49792379 | 49792519 | 49792379 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49792167 | 49792283 | 49792167 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49791238 | 49791318 | 49791238 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49790600 | 49790728 | 49790600 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | CDS | 49790305 | 49790472 | 49790305 | ID=Msa1198360-mRNA-1:cds;Parent=Msa1198360-mRNA-1 |
| chr8_1 | three_prime_UTR | 49789948 | 49790304 | 49789948 | ID=Msa1198360-mRNA-1:three_prime_utr;Parent=Msa1198360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
