Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422740 | AES72143.2 | 98.309 | 473 | 5 | 1 | 1 | 473 | 1 | 470 | 0.0 | 970 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422740 | sp|Q8LB88|RGLG5_ARATH | 64.758 | 454 | 132 | 5 | 27 | 473 | 1 | 433 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422740 | G7J350 | 98.309 | 473 | 5 | 1 | 1 | 473 | 1 | 470 | 0.0 | 970 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0422740 | -0.801323 | 9.503560e-49 | -8.615850e-47 |
| Msa0013270 | Msa0422740 | 0.800614 | 1.327195e-48 | -8.615850e-47 |
| Msa0038150 | Msa0422740 | -0.818200 | 2.219217e-52 | -8.615850e-47 |
| Msa0106540 | Msa0422740 | 0.800301 | 1.536680e-48 | -8.615850e-47 |
| Msa0111780 | Msa0422740 | 0.811263 | 7.640911e-51 | -8.615850e-47 |
| Msa0117650 | Msa0422740 | 0.800019 | 1.753759e-48 | -8.615850e-47 |
| Msa0121470 | Msa0422740 | 0.826671 | 2.386580e-54 | -8.615850e-47 |
| Msa0121490 | Msa0422740 | 0.830007 | 3.742643e-55 | -8.615850e-47 |
| Msa0126430 | Msa0422740 | 0.823000 | 1.752722e-53 | -8.615850e-47 |
| Msa0143830 | Msa0422740 | 0.803360 | 3.618616e-49 | -8.615850e-47 |
| Msa0183730 | Msa0422740 | 0.827842 | 1.251039e-54 | -8.615850e-47 |
| Msa0206370 | Msa0422740 | 0.810718 | 1.002982e-50 | -8.615850e-47 |
| Msa0219720 | Msa0422740 | -0.802451 | 5.575771e-49 | -8.615850e-47 |
| Msa0221180 | Msa0422740 | 0.818451 | 1.947353e-52 | -8.615850e-47 |
| Msa0369580 | Msa0422740 | -0.804967 | 1.675313e-49 | -8.615850e-47 |
| Msa0390200 | Msa0422740 | 0.802689 | 4.979975e-49 | -8.615850e-47 |
| Msa0422650 | Msa0422740 | 0.987654 | 4.823630e-171 | -8.615850e-47 |
| Msa0422740 | Msa0422960 | 0.992752 | 3.236227e-195 | -8.615850e-47 |
| Msa0422740 | Msa0468940 | 0.867634 | 1.184676e-65 | -8.615850e-47 |
| Msa0422740 | Msa0474660 | -0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa0422740 | Msa0480900 | -0.838125 | 3.463552e-57 | -8.615850e-47 |
| Msa0422740 | Msa0484590 | -0.806386 | 8.435308e-50 | -8.615850e-47 |
| Msa0422740 | Msa0514750 | 0.984733 | 1.996163e-161 | -8.615850e-47 |
| Msa0422740 | Msa0524310 | 0.821238 | 4.490826e-53 | -8.615850e-47 |
| Msa0422740 | Msa0524420 | 0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0422740 | Msa0524710 | 0.809474 | 1.858658e-50 | -8.615850e-47 |
| Msa0422740 | Msa0525180 | -0.801578 | 8.426449e-49 | -8.615850e-47 |
| Msa0422740 | Msa0557240 | 0.844481 | 7.359411e-59 | -8.615850e-47 |
| Msa0422740 | Msa0561830 | 0.851587 | 8.055358e-61 | -8.615850e-47 |
| Msa0422740 | Msa0570050 | 0.805357 | 1.387946e-49 | -8.615850e-47 |
| Msa0422740 | Msa0597800 | 0.812088 | 5.055828e-51 | -8.615850e-47 |
| Msa0422740 | Msa0597820 | 0.812771 | 3.585225e-51 | -8.615850e-47 |
| Msa0422740 | Msa0614960 | 0.847097 | 1.434255e-59 | -8.615850e-47 |
| Msa0422740 | Msa0622800 | -0.828678 | 7.866217e-55 | -8.615850e-47 |
| Msa0422740 | Msa0637590 | 0.810491 | 1.122426e-50 | -8.615850e-47 |
| Msa0422740 | Msa0637700 | 0.812308 | 4.526444e-51 | -8.615850e-47 |
| Msa0422740 | Msa0652590 | 0.843184 | 1.637783e-58 | -8.615850e-47 |
| Msa0422740 | Msa0655370 | 0.849388 | 3.338555e-60 | -8.615850e-47 |
| Msa0422740 | Msa0666950 | 0.803979 | 2.691987e-49 | -8.615850e-47 |
| Msa0422740 | Msa0667840 | -0.809763 | 1.610938e-50 | -8.615850e-47 |
| Msa0422740 | Msa0685390 | -0.811530 | 6.686613e-51 | -8.615850e-47 |
| Msa0422740 | Msa0694320 | 0.803524 | 3.346126e-49 | -8.615850e-47 |
| Msa0422740 | Msa0699170 | 0.855519 | 5.974005e-62 | -8.615850e-47 |
| Msa0422740 | Msa0707330 | 0.805259 | 1.455482e-49 | -8.615850e-47 |
| Msa0422740 | Msa0714230 | -0.800949 | 1.133503e-48 | -8.615850e-47 |
| Msa0422740 | Msa0731580 | 0.819027 | 1.440813e-52 | -8.615850e-47 |
| Msa0422740 | Msa0743370 | 0.813651 | 2.297817e-51 | -8.615850e-47 |
| Msa0422740 | Msa0745160 | 0.845584 | 3.707237e-59 | -8.615850e-47 |
| Msa0422740 | Msa0750790 | 0.805625 | 1.219514e-49 | -8.615850e-47 |
| Msa0422740 | Msa0750830 | 0.805090 | 1.578941e-49 | -8.615850e-47 |
| Msa0422740 | Msa0758520 | 0.807139 | 5.849096e-50 | -8.615850e-47 |
| Msa0422740 | Msa0758570 | 0.800717 | 1.264163e-48 | -8.615850e-47 |
| Msa0422740 | Msa0766910 | -0.817201 | 3.728188e-52 | -8.615850e-47 |
| Msa0422740 | Msa0776660 | 0.806625 | 7.509964e-50 | -8.615850e-47 |
| Msa0422740 | Msa0809920 | 0.808679 | 2.751547e-50 | -8.615850e-47 |
| Msa0422740 | Msa0817190 | 0.844610 | 6.795622e-59 | -8.615850e-47 |
| Msa0422740 | Msa0822680 | -0.809419 | 1.909576e-50 | -8.615850e-47 |
| Msa0422740 | Msa0827340 | -0.815884 | 7.354878e-52 | -8.615850e-47 |
| Msa0422740 | Msa0829250 | -0.807216 | 5.632565e-50 | -8.615850e-47 |
| Msa0422740 | Msa0838870 | 0.800073 | 1.710018e-48 | -8.615850e-47 |
| Msa0422740 | Msa0964400 | -0.806850 | 6.733822e-50 | -8.615850e-47 |
| Msa0422740 | Msa0968990 | 0.805798 | 1.121492e-49 | -8.615850e-47 |
| Msa0422740 | Msa1003920 | 0.803950 | 2.729372e-49 | -8.615850e-47 |
| Msa0422740 | Msa1027910 | 0.844771 | 6.149227e-59 | -8.615850e-47 |
| Msa0422740 | Msa1030210 | 0.820952 | 5.226794e-53 | -8.615850e-47 |
| Msa0422740 | Msa1035050 | 0.807777 | 4.283320e-50 | -8.615850e-47 |
| Msa0422740 | Msa1058550 | -0.801254 | 9.819042e-49 | -8.615850e-47 |
| Msa0422740 | Msa1069250 | 0.809662 | 1.693888e-50 | -8.615850e-47 |
| Msa0422740 | Msa1075090 | 0.822261 | 2.604075e-53 | -8.615850e-47 |
| Msa0422740 | Msa1078120 | -0.812713 | 3.692068e-51 | -8.615850e-47 |
| Msa0422740 | Msa1083660 | -0.804018 | 2.641415e-49 | -8.615850e-47 |
| Msa0422740 | Msa1084890 | 0.854818 | 9.553808e-62 | -8.615850e-47 |
| Msa0422740 | Msa1095590 | 0.805038 | 1.618855e-49 | -8.615850e-47 |
| Msa0422740 | Msa1113090 | 0.800333 | 1.514274e-48 | -8.615850e-47 |
| Msa0422740 | Msa1115980 | 0.804771 | 1.841110e-49 | -8.615850e-47 |
| Msa0422740 | Msa1120580 | 0.813440 | 2.556514e-51 | -8.615850e-47 |
| Msa0422740 | Msa1136690 | 0.810140 | 1.336831e-50 | -8.615850e-47 |
| Msa0422740 | Msa1156100 | -0.801613 | 8.290230e-49 | -8.615850e-47 |
| Msa0422740 | Msa1191270 | 0.816912 | 4.329447e-52 | -8.615850e-47 |
| Msa0422740 | Msa1191530 | -0.813358 | 2.664971e-51 | -8.615850e-47 |
| Msa0422740 | Msa1198360 | 0.816374 | 5.716304e-52 | -8.615850e-47 |
| Msa0422740 | Msa1217890 | 0.805503 | 1.293673e-49 | -8.615850e-47 |
| Msa0422740 | Msa1220340 | 0.804384 | 2.216396e-49 | -8.615850e-47 |
| Msa0422740 | Msa1265940 | 0.826329 | 2.879291e-54 | -8.615850e-47 |
| Msa0422740 | Msa1283070 | 0.807439 | 5.052028e-50 | -8.615850e-47 |
| Msa0422740 | Msa1287100 | -0.803601 | 3.225111e-49 | -8.615850e-47 |
| Msa0422740 | Msa1288070 | 0.800974 | 1.120225e-48 | -8.615850e-47 |
| Msa0422740 | Msa1303400 | 0.870843 | 1.073787e-66 | -8.615850e-47 |
| Msa0422740 | Msa1320160 | 0.820711 | 5.935810e-53 | -8.615850e-47 |
| Msa0422740 | Msa1331570 | -0.809429 | 1.900553e-50 | -8.615850e-47 |
| Msa0422740 | Msa1381300 | -0.803382 | 3.579696e-49 | -8.615850e-47 |
| Msa0422740 | Msa1405040 | -0.805442 | 1.332517e-49 | -8.615850e-47 |
| Msa0422740 | Msa1405830 | 0.800049 | 1.729220e-48 | -8.615850e-47 |
| Msa0422740 | Msa1431020 | 0.832340 | 9.994362e-56 | -8.615850e-47 |
| Msa0422740 | Msa1437590 | 0.809251 | 2.075024e-50 | -8.615850e-47 |
| Msa0261020 | Msa0422740 | -0.824600 | 7.393466e-54 | -8.615850e-47 |
| Msa0262750 | Msa0422740 | 0.802279 | 6.049144e-49 | -8.615850e-47 |
| Msa0271700 | Msa0422740 | 0.802512 | 5.415265e-49 | -8.615850e-47 |
| Msa0271720 | Msa0422740 | 0.804441 | 2.157025e-49 | -8.615850e-47 |
| Msa0275730 | Msa0422740 | 0.802429 | 5.634172e-49 | -8.615850e-47 |
| Msa0278920 | Msa0422740 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0293060 | Msa0422740 | -0.803181 | 3.940670e-49 | -8.615850e-47 |
| Msa0300470 | Msa0422740 | 0.825680 | 4.108083e-54 | -8.615850e-47 |
| Msa0320170 | Msa0422740 | 0.809062 | 2.278379e-50 | -8.615850e-47 |
| Msa0336550 | Msa0422740 | -0.830340 | 3.103007e-55 | -8.615850e-47 |
| Msa0337970 | Msa0422740 | 0.822362 | 2.466518e-53 | -8.615850e-47 |
| Msa0345890 | Msa0422740 | 0.803271 | 3.775648e-49 | -8.615850e-47 |
| Msa0350180 | Msa0422740 | 0.813397 | 2.613131e-51 | -8.615850e-47 |
| Msa0357470 | Msa0422740 | 0.816181 | 6.312281e-52 | -8.615850e-47 |
| Msa0357510 | Msa0422740 | 0.828449 | 8.935113e-55 | -8.615850e-47 |
| Msa0357530 | Msa0422740 | 0.808949 | 2.408975e-50 | -8.615850e-47 |
| Msa0357560 | Msa0422740 | 0.800110 | 1.680710e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422740 | MtrunA17_Chr3g0123481 | 97.886 | 473 | 7 | 1 | 1 | 473 | 1 | 470 | 0.0 | 967 |
| Msa0422740 | MtrunA17_Chr8g0381321 | 74.066 | 482 | 109 | 7 | 1 | 473 | 1 | 475 | 0.0 | 711 |
| Msa0422740 | MtrunA17_Chr6g0458051 | 63.340 | 491 | 131 | 7 | 27 | 473 | 1 | 486 | 0.0 | 603 |
| Msa0422740 | MtrunA17_Chr7g0226791 | 64.680 | 453 | 146 | 6 | 27 | 473 | 1 | 445 | 0.0 | 573 |
| Msa0422740 | MtrunA17_Chr3g0116661 | 68.704 | 409 | 114 | 4 | 73 | 473 | 33 | 435 | 0.0 | 567 |
| Msa0422740 | MtrunA17_Chr3g0130411 | 57.047 | 447 | 154 | 7 | 39 | 473 | 17 | 437 | 4.97e-172 | 490 |
| Msa0422740 | MtrunA17_Chr2g0309781 | 55.825 | 412 | 140 | 4 | 62 | 473 | 32 | 401 | 1.00e-160 | 460 |
| Msa0422740 | MtrunA17_Chr2g0309791 | 58.961 | 385 | 130 | 4 | 90 | 473 | 58 | 415 | 6.79e-160 | 459 |
| Msa0422740 | MtrunA17_Chr8g0356381 | 58.122 | 394 | 135 | 5 | 86 | 473 | 36 | 405 | 6.13e-153 | 441 |
| Msa0422740 | MtrunA17_Chr2g0309821 | 55.556 | 387 | 133 | 3 | 62 | 448 | 26 | 373 | 2.21e-146 | 423 |
| Msa0422740 | MtrunA17_Chr6g0488251 | 58.232 | 328 | 106 | 3 | 146 | 473 | 9 | 305 | 5.55e-136 | 394 |
| Msa0422740 | MtrunA17_Chr6g0488261 | 65.965 | 285 | 94 | 2 | 101 | 384 | 2 | 284 | 7.33e-135 | 391 |
| Msa0422740 | MtrunA17_Chr7g0250181 | 64.571 | 175 | 46 | 2 | 160 | 318 | 11 | 185 | 9.00e-75 | 233 |
| Msa0422740 | MtrunA17_Chr7g0250151 | 65.289 | 121 | 42 | 0 | 142 | 262 | 4 | 124 | 1.06e-48 | 163 |
| Msa0422740 | MtrunA17_Chr8g0385701 | 34.375 | 256 | 124 | 11 | 122 | 357 | 337 | 568 | 8.05e-23 | 101 |
| Msa0422740 | MtrunA17_Chr1g0170101 | 32.016 | 253 | 123 | 10 | 128 | 357 | 298 | 524 | 6.13e-21 | 95.9 |
| Msa0422740 | MtrunA17_Chr7g0273481 | 32.271 | 251 | 121 | 11 | 128 | 355 | 338 | 562 | 3.17e-20 | 93.6 |
| Msa0422740 | MtrunA17_Chr7g0273401 | 34.973 | 183 | 89 | 7 | 130 | 299 | 1 | 166 | 5.95e-20 | 87.4 |
| Msa0422740 | MtrunA17_Chr7g0250161 | 55.882 | 68 | 28 | 1 | 260 | 325 | 17 | 84 | 4.35e-19 | 83.6 |
| Msa0422740 | MtrunA17_Chr8g0356391 | 63.636 | 44 | 16 | 0 | 430 | 473 | 511 | 554 | 1.92e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0422740 | AT1G67800.2 | 63.270 | 471 | 145 | 5 | 10 | 473 | 4 | 453 | 0.0 | 582 |
| Msa0422740 | AT1G67800.4 | 64.758 | 454 | 132 | 5 | 27 | 473 | 1 | 433 | 0.0 | 578 |
| Msa0422740 | AT1G67800.1 | 64.758 | 454 | 132 | 5 | 27 | 473 | 1 | 433 | 0.0 | 578 |
| Msa0422740 | AT1G67800.3 | 64.758 | 454 | 132 | 5 | 27 | 473 | 1 | 433 | 0.0 | 578 |
| Msa0422740 | AT1G67800.6 | 64.758 | 454 | 132 | 5 | 27 | 473 | 1 | 433 | 0.0 | 578 |
| Msa0422740 | AT5G14420.3 | 71.216 | 403 | 113 | 2 | 74 | 473 | 66 | 468 | 0.0 | 574 |
| Msa0422740 | AT5G14420.2 | 71.216 | 403 | 113 | 2 | 74 | 473 | 66 | 468 | 0.0 | 574 |
| Msa0422740 | AT5G14420.4 | 71.216 | 403 | 113 | 2 | 74 | 473 | 66 | 468 | 0.0 | 574 |
| Msa0422740 | AT5G14420.1 | 71.216 | 403 | 113 | 2 | 74 | 473 | 66 | 468 | 0.0 | 574 |
| Msa0422740 | AT3G01650.2 | 67.612 | 423 | 113 | 5 | 51 | 473 | 91 | 489 | 0.0 | 567 |
| Msa0422740 | AT3G01650.1 | 67.612 | 423 | 113 | 5 | 51 | 473 | 91 | 489 | 0.0 | 567 |
| Msa0422740 | AT1G67800.5 | 61.737 | 426 | 135 | 3 | 10 | 429 | 4 | 407 | 7.47e-180 | 509 |
| Msa0422740 | AT5G63970.2 | 59.947 | 377 | 135 | 3 | 97 | 473 | 6 | 366 | 1.14e-158 | 454 |
| Msa0422740 | AT5G63970.1 | 59.947 | 377 | 135 | 3 | 97 | 473 | 6 | 366 | 1.14e-158 | 454 |
| Msa0422740 | AT1G79380.1 | 54.813 | 374 | 145 | 2 | 100 | 473 | 51 | 400 | 4.72e-144 | 418 |
| Msa0422740 | AT1G24545.1 | 51.376 | 109 | 15 | 1 | 143 | 251 | 46 | 116 | 1.62e-26 | 106 |
| Msa0422740 | AT5G07300.1 | 33.865 | 251 | 116 | 13 | 128 | 355 | 344 | 567 | 4.91e-21 | 96.7 |
| Msa0422740 | AT5G61910.4 | 33.068 | 251 | 118 | 12 | 128 | 355 | 1109 | 1332 | 9.02e-21 | 96.7 |
| Msa0422740 | AT5G61900.3 | 33.068 | 251 | 118 | 12 | 128 | 355 | 341 | 564 | 2.60e-20 | 94.4 |
| Msa0422740 | AT5G61900.1 | 33.068 | 251 | 118 | 12 | 128 | 355 | 341 | 564 | 2.60e-20 | 94.4 |
| Msa0422740 | AT1G08860.1 | 32.143 | 252 | 119 | 12 | 128 | 355 | 344 | 567 | 9.04e-20 | 92.8 |
Find 131 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGTGAATTCTCATAAAA+TGG | 0.146917 | 3_2:-72228754 | None:intergenic |
| GAACAAGCAATCTCTATTAT+TGG | 0.182085 | 3_2:+72229758 | Msa0422740:CDS |
| ACCATAGAACTTGGCTTATT+GGG | 0.205055 | 3_2:+72231175 | Msa0422740:CDS |
| AACCATAGAACTTGGCTTAT+TGG | 0.212397 | 3_2:+72231174 | Msa0422740:CDS |
| CTTCAGGTTCTTCATCTTCA+TGG | 0.241413 | 3_2:+72228632 | Msa0422740:CDS |
| GATAACTTGATTCCATGTTT+TGG | 0.258307 | 3_2:+72229806 | Msa0422740:CDS |
| GTCATGGCCATCTCAATAAT+AGG | 0.280344 | 3_2:-72230352 | None:intergenic |
| TTCAGTTCTGTCCCATTTGC+CGG | 0.293044 | 3_2:+72231840 | Msa0422740:CDS |
| CCCCAATAAGCCAAGTTCTA+TGG | 0.299468 | 3_2:-72231176 | None:intergenic |
| TCTTACCGATGCGAAGGATA+TGG | 0.302947 | 3_2:+72231665 | Msa0422740:CDS |
| GTCGTTCTTTCTATTAAGTA+TGG | 0.304457 | 3_2:+72232172 | Msa0422740:three_prime_UTR |
| TTCGCATCGGTAAGACAAAT+AGG | 0.311510 | 3_2:-72231657 | None:intergenic |
| GTTCCTTCATATGAGGCTTC+AGG | 0.316189 | 3_2:+72228616 | Msa0422740:CDS |
| AATAATAACTATGATGGATA+TGG | 0.332294 | 3_2:+72228655 | Msa0422740:CDS |
| GGAGATACCTTCTCAATATA+AGG | 0.343251 | 3_2:+72231150 | Msa0422740:CDS |
| ATAGAGATTGCTTGTTCATA+AGG | 0.343775 | 3_2:-72229752 | None:intergenic |
| TCTAACTTATCATACTTTGA+TGG | 0.345408 | 3_2:-72231954 | None:intergenic |
| ACTGCTGCTCTTGCAAATGC+TGG | 0.348605 | 3_2:+72229536 | Msa0422740:CDS |
| AAGCTCTTTACATGATAATA+AGG | 0.349419 | 3_2:+72231476 | Msa0422740:CDS |
| AACAAGCAATCTCTATTATT+GGG | 0.350518 | 3_2:+72229759 | Msa0422740:CDS |
| TATTCTGAAGGAGATTGTTA+TGG | 0.353222 | 3_2:+72228555 | Msa0422740:CDS |
| GTTCCTCAACTCAAACTTGC+AGG | 0.357893 | 3_2:+72230030 | Msa0422740:CDS |
| TGCTGATAATTACCAATCAT+TGG | 0.361248 | 3_2:+72228810 | Msa0422740:CDS |
| TGGTGCTGAGGTGTTTGATA+TGG | 0.362304 | 3_2:-72228712 | None:intergenic |
| AGTGATTGTGCTCCGGCAAA+TGG | 0.368528 | 3_2:-72231852 | None:intergenic |
| GTATCCATTGTCAATAGTTT+TGG | 0.373721 | 3_2:+72230876 | Msa0422740:CDS |
| ATTCTGAAGGAGATTGTTAT+GGG | 0.375661 | 3_2:+72228556 | Msa0422740:CDS |
| TCATGGCCATCTCAATAATA+GGG | 0.382764 | 3_2:-72230351 | None:intergenic |
| TACCTGCCCCTCTTTATAAT+AGG | 0.385177 | 3_2:+72231343 | Msa0422740:CDS |
| TTCTTACCTCATCCAATGAT+TGG | 0.392097 | 3_2:-72228822 | None:intergenic |
| AGTTAGATAAGAGGTATTCC+AGG | 0.399559 | 3_2:+72228785 | Msa0422740:CDS |
| CTGTACATTGTCCGGATTGA+AGG | 0.401825 | 3_2:+72232060 | Msa0422740:three_prime_UTR |
| GTATTCTGTATCAATGCTTC+TGG | 0.404457 | 3_2:-72230729 | None:intergenic |
| GCTAGAAACTTGGACAGCTT+TGG | 0.412921 | 3_2:+72228507 | Msa0422740:CDS |
| GAATCTTCTAATCTCATTGT+TGG | 0.417569 | 3_2:+72229563 | Msa0422740:CDS |
| TCTTCTGTTCCTGTGGACTT+AGG | 0.419888 | 3_2:-72230757 | None:intergenic |
| TAGGAGTTGGAGATGGGCCG+TGG | 0.422949 | 3_2:+72230899 | Msa0422740:CDS |
| GTTTGCCCTTGATGCTTTGA+TGG | 0.428071 | 3_2:+72231129 | Msa0422740:CDS |
| GGCCTTCGGCTGTGGACATC+AGG | 0.428783 | 3_2:+72231686 | Msa0422740:CDS |
| TGCTCTTGCAAATGCTGGGC+TGG | 0.440966 | 3_2:+72229541 | Msa0422740:CDS |
| TAGAGATTGCTTGTTCATAA+GGG | 0.442178 | 3_2:-72229751 | None:intergenic |
| CAAGTTATCTTCATCAAAAG+TGG | 0.442539 | 3_2:-72229792 | None:intergenic |
| CAGTCCTCCTGTACATTGTC+CGG | 0.443259 | 3_2:+72232052 | Msa0422740:three_prime_UTR |
| CACATATATACAACAATGTA+AGG | 0.450605 | 3_2:-72232027 | None:intergenic |
| ATGGGAGGGAATAGTTCAAA+AGG | 0.451325 | 3_2:+72228574 | Msa0422740:CDS |
| CTGTCTCTGTACAAATTGTC+AGG | 0.456889 | 3_2:+72232108 | Msa0422740:three_prime_UTR |
| TCATGTAAAGAGCTTGTAGA+TGG | 0.457088 | 3_2:-72231468 | None:intergenic |
| TGGAATTGCAGCTAGAAACT+TGG | 0.461616 | 3_2:+72228497 | Msa0422740:CDS |
| AAGGATATGGCCTTCGGCTG+TGG | 0.465607 | 3_2:+72231678 | Msa0422740:CDS |
| TCATGGAATAATAACTATGA+TGG | 0.467927 | 3_2:+72228649 | Msa0422740:CDS |
| GGAGGGGACATTCGCCGGAT+AGG | 0.471093 | 3_2:+72231313 | Msa0422740:CDS |
| GCAGGTAGAGGAACCCTATC+CGG | 0.472052 | 3_2:-72231327 | None:intergenic |
| GAGCTGATGCAGATGAAAAC+TGG | 0.472607 | 3_2:-72228732 | None:intergenic |
| TATTCATAGCCGGTATCTCT+AGG | 0.474025 | 3_2:-72231423 | None:intergenic |
| TCGCATCGGTAAGACAAATA+GGG | 0.477708 | 3_2:-72231656 | None:intergenic |
| GTTCGCCCCTATTATTGAGA+TGG | 0.480004 | 3_2:+72230345 | Msa0422740:CDS |
| ATTAAAATTTCATTGAAAGC+AGG | 0.481396 | 3_2:-72231910 | None:intergenic |
| CTGCTGCTCTTGCAAATGCT+GGG | 0.481701 | 3_2:+72229537 | Msa0422740:CDS |
| GCTAATAATTGCAGATGGAC+AGG | 0.482092 | 3_2:+72230411 | Msa0422740:CDS |
| TTGGTAATTATCAGCAATCC+TGG | 0.483837 | 3_2:-72228803 | None:intergenic |
| GTCCTATTATAAAGAGGGGC+AGG | 0.485754 | 3_2:-72231345 | None:intergenic |
| GTGATTGTGCTCCGGCAAAT+GGG | 0.486903 | 3_2:-72231851 | None:intergenic |
| AAGGCATGTTCCTTCATATG+AGG | 0.489795 | 3_2:+72228609 | Msa0422740:CDS |
| GAACCTGAAGCCTCATATGA+AGG | 0.490085 | 3_2:-72228619 | None:intergenic |
| TGCACGGAGGGGACATTCGC+CGG | 0.506356 | 3_2:+72231308 | Msa0422740:CDS |
| GAGGGGACATTCGCCGGATA+GGG | 0.506490 | 3_2:+72231314 | Msa0422740:CDS |
| CAGAGTGTCCCTAGAGATAC+CGG | 0.508438 | 3_2:+72231414 | Msa0422740:CDS |
| ATAGTTCAAAAGGGTCTCCT+AGG | 0.509315 | 3_2:+72228584 | Msa0422740:CDS |
| TGATGATGATGCCTTCAATC+CGG | 0.515152 | 3_2:-72232071 | None:intergenic |
| TTATAAAGAGGGGCAGGTAG+AGG | 0.516187 | 3_2:-72231339 | None:intergenic |
| GAAGGAACATGCCTTCTCCT+AGG | 0.518981 | 3_2:-72228601 | None:intergenic |
| TGAAGGAGATTGTTATGGGA+GGG | 0.521525 | 3_2:+72228560 | Msa0422740:CDS |
| TGCTGAGGATGTGGTGATTG+TGG | 0.521545 | 3_2:-72228685 | None:intergenic |
| AACTCCGTCTCTCTTCGACT+TGG | 0.522154 | 3_2:-72231109 | None:intergenic |
| TATAAGGCAACCATAGAACT+TGG | 0.523288 | 3_2:+72231166 | Msa0422740:CDS |
| GATGCGAAGGATATGGCCTT+CGG | 0.523527 | 3_2:+72231672 | Msa0422740:CDS |
| ATAATAGGGGCGAACGAAGT+CGG | 0.525409 | 3_2:-72230337 | None:intergenic |
| CTTCAATCCGGACAATGTAC+AGG | 0.526742 | 3_2:-72232059 | None:intergenic |
| AAGAAGTCCTATTATAAAGA+GGG | 0.527574 | 3_2:-72231350 | None:intergenic |
| TGGCAGACTTGTTGTGGATG+TGG | 0.528940 | 3_2:+72231809 | Msa0422740:intron |
| GAAGAAGTCCTATTATAAAG+AGG | 0.532320 | 3_2:-72231351 | None:intergenic |
| TCTTAGTAGTGATTGTGCTC+CGG | 0.533999 | 3_2:-72231859 | None:intergenic |
| TTTATTGTCTTCTGTTCCTG+TGG | 0.536657 | 3_2:-72230764 | None:intergenic |
| AGAAGCATTGATACAGAATA+CGG | 0.538171 | 3_2:+72230731 | Msa0422740:CDS |
| TGATATGAGTAGTGCACGGA+GGG | 0.542228 | 3_2:+72231296 | Msa0422740:intron |
| AGTTTACATCACATTGGAAG+TGG | 0.542890 | 3_2:+72229722 | Msa0422740:CDS |
| ATGGTTGCCTTATATTGAGA+AGG | 0.548809 | 3_2:-72231157 | None:intergenic |
| AATTGTCAAACGCACGAGAA+GGG | 0.560209 | 3_2:-72230951 | None:intergenic |
| CCATCTCCAAATCCAAAACA+TGG | 0.561260 | 3_2:-72229818 | None:intergenic |
| CCATAGAACTTGGCTTATTG+GGG | 0.563316 | 3_2:+72231176 | Msa0422740:CDS |
| CGGACAATGTACAGGAGGAC+TGG | 0.567172 | 3_2:-72232051 | None:intergenic |
| TATGGATTCTGCTGAGGATG+TGG | 0.568617 | 3_2:-72228694 | None:intergenic |
| TAAATGCGATCGTAAAAGCC+AGG | 0.572844 | 3_2:+72230783 | Msa0422740:CDS |
| GTCTTGCTAATAATTGCAGA+TGG | 0.575821 | 3_2:+72230406 | Msa0422740:CDS |
| TTAGCTTCTATTCAGAAGAG+AGG | 0.578942 | 3_2:+72229962 | Msa0422740:CDS |
| TAATTACCAATCATTGGATG+AGG | 0.579043 | 3_2:+72228816 | Msa0422740:CDS |
| GGCAAATGGGACAGAACTGA+AGG | 0.579057 | 3_2:-72231838 | None:intergenic |
| ACAAAGAGTAATGAGTGGAC+AGG | 0.580423 | 3_2:+72229596 | Msa0422740:CDS |
| TGGGCCGTGGGAGATGATGA+AGG | 0.581679 | 3_2:+72230912 | Msa0422740:CDS |
| CCTACCAAAACTATTGACAA+TGG | 0.582923 | 3_2:-72230880 | None:intergenic |
| ATTCATAGCCGGTATCTCTA+GGG | 0.583202 | 3_2:-72231422 | None:intergenic |
| CAAAAGGGTCTCCTAGGAGA+AGG | 0.583637 | 3_2:+72228590 | Msa0422740:CDS |
| GTATCTCCATCAAAGCATCA+AGG | 0.586069 | 3_2:-72231135 | None:intergenic |
| AGGACTTCTTCAAGCATCAG+TGG | 0.590302 | 3_2:+72231363 | Msa0422740:CDS |
| AAATTGTCAAACGCACGAGA+AGG | 0.592611 | 3_2:-72230952 | None:intergenic |
| ATGACATGGCAGACTTGTTG+TGG | 0.600617 | 3_2:+72231803 | Msa0422740:intron |
| TATTTGTCTTACCGATGCGA+AGG | 0.603354 | 3_2:+72231659 | Msa0422740:CDS |
| CTGAAGGAGATTGTTATGGG+AGG | 0.603550 | 3_2:+72228559 | Msa0422740:CDS |
| AGGAGTTGGAGATGGGCCGT+GGG | 0.606259 | 3_2:+72230900 | Msa0422740:CDS |
| TGGGAGGGAATAGTTCAAAA+GGG | 0.609344 | 3_2:+72228575 | Msa0422740:CDS |
| ACTTTGTTCAACAATAGTCA+TGG | 0.613116 | 3_2:-72230368 | None:intergenic |
| TATCTCCATCAAAGCATCAA+GGG | 0.616209 | 3_2:-72231134 | None:intergenic |
| ACTGCGTTCATATTCATAGC+CGG | 0.621442 | 3_2:-72231433 | None:intergenic |
| ACTATTGTTGAACAAAGTGC+TGG | 0.622535 | 3_2:+72230373 | Msa0422740:CDS |
| TACCTGATGTCCACAGCCGA+AGG | 0.622550 | 3_2:-72231688 | None:intergenic |
| AATTCCTTCATCATCTCCCA+CGG | 0.625144 | 3_2:-72230916 | None:intergenic |
| CATGGCCATCTCAATAATAG+GGG | 0.627990 | 3_2:-72230350 | None:intergenic |
| AAATCCAAGTCGAAGAGAGA+CGG | 0.629464 | 3_2:+72231105 | Msa0422740:CDS |
| TCAGAAGAGAGGTTATGCAA+TGG | 0.630962 | 3_2:+72229973 | Msa0422740:CDS |
| ATACGGCAACCTAAGTCCAC+AGG | 0.633516 | 3_2:+72230748 | Msa0422740:CDS |
| ATTTCACAAAGAGTAATGAG+TGG | 0.655353 | 3_2:+72229591 | Msa0422740:CDS |
| GAAGGCCATATCCTTCGCAT+CGG | 0.662839 | 3_2:-72231670 | None:intergenic |
| TGAGGATGTGGTGATTGTGG+TGG | 0.663046 | 3_2:-72228682 | None:intergenic |
| TAAGTTAGAACATCAGAGTG+AGG | 0.668701 | 3_2:+72231968 | Msa0422740:three_prime_UTR |
| AGAAGTCCTATTATAAAGAG+GGG | 0.671558 | 3_2:-72231349 | None:intergenic |
| GTTTGATATGGATTCTGCTG+AGG | 0.672997 | 3_2:-72228700 | None:intergenic |
| ACACCTGCAAGTTTGAGTTG+AGG | 0.674035 | 3_2:-72230033 | None:intergenic |
| GCAGATGAAAACTGGTGCTG+AGG | 0.682425 | 3_2:-72228724 | None:intergenic |
| CAATCCGGACAATGTACAGG+AGG | 0.683927 | 3_2:-72232056 | None:intergenic |
| GATATGAGTAGTGCACGGAG+GGG | 0.694298 | 3_2:+72231297 | Msa0422740:intron |
| TTGATATGAGTAGTGCACGG+AGG | 0.715455 | 3_2:+72231295 | Msa0422740:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTGTG+GGG | + | chr3_2:72228948-72228967 | Msa0422740:intron | 10.0% |
| !!! | ATTGATTTTTGTTTTTAATT+AGG | + | chr3_2:72230281-72230300 | Msa0422740:intron | 10.0% |
| !! | TCAATTTATTCAATCTAATT+GGG | + | chr3_2:72229120-72229139 | Msa0422740:intron | 15.0% |
| !!! | ATAATATAAGATTCTAAAGT+AGG | + | chr3_2:72229252-72229271 | Msa0422740:intron | 15.0% |
| !! | TAAATAAGTACTTAATTAAG+TGG | - | chr3_2:72229290-72229309 | None:intergenic | 15.0% |
| !! | ATATCTTATCTTATTAGTTA+CGG | + | chr3_2:72230580-72230599 | Msa0422740:intron | 15.0% |
| !! | TAATAACTTATAACTGAATT+TGG | + | chr3_2:72231256-72231275 | Msa0422740:intron | 15.0% |
| !!! | TCAATGAAATTTTAATTCAT+TGG | + | chr3_2:72231917-72231936 | Msa0422740:three_prime_UTR | 15.0% |
| !!! | TTTACTTTGTTTTATTCTGA+AGG | + | chr3_2:72228543-72228562 | Msa0422740:CDS | 20.0% |
| !!! | AATAATAACTATGATGGATA+TGG | + | chr3_2:72228655-72228674 | Msa0422740:CDS | 20.0% |
| !! | TAATGACAAACAAAATCAAA+GGG | - | chr3_2:72228915-72228934 | None:intergenic | 20.0% |
| !! | ATAATGACAAACAAAATCAA+AGG | - | chr3_2:72228916-72228935 | None:intergenic | 20.0% |
| !! | ATTATAAAAACAGTATCCTT+TGG | - | chr3_2:72228985-72229004 | None:intergenic | 20.0% |
| !!! | TTTAGATTTTAGAGTCAAAA+GGG | + | chr3_2:72229061-72229080 | Msa0422740:intron | 20.0% |
| !! | GTCAATTTATTCAATCTAAT+TGG | + | chr3_2:72229119-72229138 | Msa0422740:intron | 20.0% |
| !!! | TCAACCAAAATTAATTGTTT+TGG | + | chr3_2:72229452-72229471 | Msa0422740:intron | 20.0% |
| !!! | AGTTCCAAAACAATTAATTT+TGG | - | chr3_2:72229459-72229478 | None:intergenic | 20.0% |
| !! | TGAAAAAAACAAAACTACAT+TGG | - | chr3_2:72229874-72229893 | None:intergenic | 20.0% |
| !!! | ACTTGTTATCTTAGATATTT+TGG | + | chr3_2:72230071-72230090 | Msa0422740:intron | 20.0% |
| !!! | AAAAATCAATCTAAGATAAC+AGG | - | chr3_2:72230271-72230290 | None:intergenic | 20.0% |
| !! | AAAACTAAAAAAAACTTACC+TGG | - | chr3_2:72230804-72230823 | None:intergenic | 20.0% |
| !! | GAAGATTTATCGTTTATATA+TGG | - | chr3_2:72231002-72231021 | None:intergenic | 20.0% |
| !!! | TACTTAAAATTTGTTAGACA+GGG | + | chr3_2:72231221-72231240 | Msa0422740:intron | 20.0% |
| !! | ATTAAAATTTCATTGAAAGC+AGG | - | chr3_2:72231913-72231932 | None:intergenic | 20.0% |
| ! | TCATGGAATAATAACTATGA+TGG | + | chr3_2:72228649-72228668 | Msa0422740:CDS | 25.0% |
| !!! | CTCTTATCTAACTTCTTTTT+TGG | - | chr3_2:72228778-72228797 | None:intergenic | 25.0% |
| ! | CAAAAAAGAAGTTAGATAAG+AGG | + | chr3_2:72228776-72228795 | Msa0422740:CDS | 25.0% |
| ! | TTGAACAAGAATTAAACTCT+GGG | + | chr3_2:72229009-72229028 | Msa0422740:intron | 25.0% |
| !!! | GTTTAGATTTTAGAGTCAAA+AGG | + | chr3_2:72229060-72229079 | Msa0422740:intron | 25.0% |
| !!! | TTAGATTTTAGAGTCAAAAG+GGG | + | chr3_2:72229062-72229081 | Msa0422740:intron | 25.0% |
| ! | ATTCAATCTAATTGGGTATA+AGG | + | chr3_2:72229127-72229146 | Msa0422740:intron | 25.0% |
| ! | TTCAATCTAATTGGGTATAA+GGG | + | chr3_2:72229128-72229147 | Msa0422740:intron | 25.0% |
| ! | TAATCGTCAAAATGAAAATG+AGG | + | chr3_2:72229353-72229372 | Msa0422740:intron | 25.0% |
| ! | GAAATAAACAGCTTATACAA+AGG | - | chr3_2:72229393-72229412 | None:intergenic | 25.0% |
| !! | AATAATGTGTATTTTCTCTC+TGG | - | chr3_2:72229482-72229501 | None:intergenic | 25.0% |
| ! | AACAAGCAATCTCTATTATT+GGG | + | chr3_2:72229759-72229778 | Msa0422740:CDS | 25.0% |
| ! | GATAACAAGTGAATGAATAA+AGG | - | chr3_2:72230061-72230080 | None:intergenic | 25.0% |
| ! | TAATCCATATTTCACACTAT+AGG | + | chr3_2:72230442-72230461 | Msa0422740:intron | 25.0% |
| ! | CTTTGATGAATGAAATTAGT+CGG | + | chr3_2:72230634-72230653 | Msa0422740:intron | 25.0% |
| !!! | GTACTTAAAATTTGTTAGAC+AGG | + | chr3_2:72231220-72231239 | Msa0422740:intron | 25.0% |
| ! | AAGAAGTCCTATTATAAAGA+GGG | - | chr3_2:72231353-72231372 | None:intergenic | 25.0% |
| ! | AAGCTCTTTACATGATAATA+AGG | + | chr3_2:72231476-72231495 | Msa0422740:CDS | 25.0% |
| ! | TCTAACTTATCATACTTTGA+TGG | - | chr3_2:72231957-72231976 | None:intergenic | 25.0% |
| ! | CACATATATACAACAATGTA+AGG | - | chr3_2:72232030-72232049 | None:intergenic | 25.0% |
| !!! | TCAATGAACACTTTTTTTGT+TGG | + | chr3_2:72232137-72232156 | Msa0422740:three_prime_UTR | 25.0% |
| !!! | CAATTATTTTTTTCAGACGA+AGG | - | chr3_2:72232217-72232236 | None:intergenic | 25.0% |
| ! | TATTCTGAAGGAGATTGTTA+TGG | + | chr3_2:72228555-72228574 | Msa0422740:CDS | 30.0% |
| ! | ATTCTGAAGGAGATTGTTAT+GGG | + | chr3_2:72228556-72228575 | Msa0422740:CDS | 30.0% |
| TGCTGATAATTACCAATCAT+TGG | + | chr3_2:72228810-72228829 | Msa0422740:CDS | 30.0% | |
| TAATTACCAATCATTGGATG+AGG | + | chr3_2:72228816-72228835 | Msa0422740:CDS | 30.0% | |
| !!! | TTTTTTTTGTGGGGTTAGAA+TGG | + | chr3_2:72228957-72228976 | Msa0422740:intron | 30.0% |
| !!! | TTTTTTTGTGGGGTTAGAAT+GGG | + | chr3_2:72228958-72228977 | Msa0422740:intron | 30.0% |
| CTTGAACAAGAATTAAACTC+TGG | + | chr3_2:72229008-72229027 | Msa0422740:intron | 30.0% | |
| TGAACAAGAATTAAACTCTG+GGG | + | chr3_2:72229010-72229029 | Msa0422740:intron | 30.0% | |
| !!! | TAGATTTTAGAGTCAAAAGG+GGG | + | chr3_2:72229063-72229082 | Msa0422740:intron | 30.0% |
| !! | AAGATTCTAAAGTAGGAGTT+CGG | + | chr3_2:72229259-72229278 | Msa0422740:intron | 30.0% |
| GAATCTTCTAATCTCATTGT+TGG | + | chr3_2:72229563-72229582 | Msa0422740:CDS | 30.0% | |
| ATTTCACAAAGAGTAATGAG+TGG | + | chr3_2:72229591-72229610 | Msa0422740:CDS | 30.0% | |
| AGTATATACTTCACTTTCTC+AGG | + | chr3_2:72229677-72229696 | Msa0422740:intron | 30.0% | |
| GTATATACTTCACTTTCTCA+GGG | + | chr3_2:72229678-72229697 | Msa0422740:intron | 30.0% | |
| CGAAAAAGTTTACATCACAT+TGG | + | chr3_2:72229716-72229735 | Msa0422740:CDS | 30.0% | |
| TAGAGATTGCTTGTTCATAA+GGG | - | chr3_2:72229754-72229773 | None:intergenic | 30.0% | |
| ATAGAGATTGCTTGTTCATA+AGG | - | chr3_2:72229755-72229774 | None:intergenic | 30.0% | |
| GAACAAGCAATCTCTATTAT+TGG | + | chr3_2:72229758-72229777 | Msa0422740:CDS | 30.0% | |
| CAAGTTATCTTCATCAAAAG+TGG | - | chr3_2:72229795-72229814 | None:intergenic | 30.0% | |
| ! | GATAACTTGATTCCATGTTT+TGG | + | chr3_2:72229806-72229825 | Msa0422740:CDS | 30.0% |
| !! | TTGATTCCATGTTTTGGATT+TGG | + | chr3_2:72229812-72229831 | Msa0422740:CDS | 30.0% |
| !!! | ATATTTTGGTCTTAACCCTT+CGG | + | chr3_2:72230085-72230104 | Msa0422740:intron | 30.0% |
| CAATTAAGATCGAATCATTC+AGG | - | chr3_2:72230205-72230224 | None:intergenic | 30.0% | |
| CTGAATGATTCGATCTTAAT+TGG | + | chr3_2:72230203-72230222 | Msa0422740:intron | 30.0% | |
| TCATAAATCACTTGAACACT+TGG | + | chr3_2:72230229-72230248 | Msa0422740:intron | 30.0% | |
| ! | ACTTGTTGCATTCATAAAAC+AGG | + | chr3_2:72230313-72230332 | Msa0422740:intron | 30.0% |
| ACTTTGTTCAACAATAGTCA+TGG | - | chr3_2:72230371-72230390 | None:intergenic | 30.0% | |
| TGTACCTATAGTGTGAAATA+TGG | - | chr3_2:72230449-72230468 | None:intergenic | 30.0% | |
| AAATGAATTAACTGCAATGC+TGG | + | chr3_2:72230516-72230535 | Msa0422740:intron | 30.0% | |
| !! | AGAAGCATTGATACAGAATA+CGG | + | chr3_2:72230731-72230750 | Msa0422740:CDS | 30.0% |
| ! | AAGAGTATAAGAATGCAGAA+TGG | - | chr3_2:72230841-72230860 | None:intergenic | 30.0% |
| ! | GTATCCATTGTCAATAGTTT+TGG | + | chr3_2:72230876-72230895 | Msa0422740:CDS | 30.0% |
| !!! | GTTTGACAATTTTCAGGTTT+GGG | + | chr3_2:72230963-72230982 | Msa0422740:intron | 30.0% |
| ! | AAATGTGATAATGTTGTCTG+TGG | + | chr3_2:72231033-72231052 | Msa0422740:intron | 30.0% |
| AGAAGTCCTATTATAAAGAG+GGG | - | chr3_2:72231352-72231371 | None:intergenic | 30.0% | |
| GAAGAAGTCCTATTATAAAG+AGG | - | chr3_2:72231354-72231373 | None:intergenic | 30.0% | |
| ! | GAGATAGAAATGATGATGAA+TGG | - | chr3_2:72231585-72231604 | None:intergenic | 30.0% |
| CTCACTTTGAATAGTAATAG+TGG | + | chr3_2:72231602-72231621 | Msa0422740:intron | 30.0% | |
| GTCGTTCTTTCTATTAAGTA+TGG | + | chr3_2:72232172-72232191 | Msa0422740:three_prime_UTR | 30.0% | |
| GGCTGTGAATTCTCATAAAA+TGG | - | chr3_2:72228757-72228776 | None:intergenic | 35.0% | |
| !! | AGTTAGATAAGAGGTATTCC+AGG | + | chr3_2:72228785-72228804 | Msa0422740:CDS | 35.0% |
| ! | TTGGTAATTATCAGCAATCC+TGG | - | chr3_2:72228806-72228825 | None:intergenic | 35.0% |
| TTCTTACCTCATCCAATGAT+TGG | - | chr3_2:72228825-72228844 | None:intergenic | 35.0% | |
| AGAAACTGAGATAACAGCAA+AGG | + | chr3_2:72229094-72229113 | Msa0422740:intron | 35.0% | |
| GAAACTGAGATAACAGCAAA+GGG | + | chr3_2:72229095-72229114 | Msa0422740:intron | 35.0% | |
| AAACTGAGATAACAGCAAAG+GGG | + | chr3_2:72229096-72229115 | Msa0422740:intron | 35.0% | |
| !! | GACTTTCTGAGTTTTATGTC+TGG | + | chr3_2:72229152-72229171 | Msa0422740:intron | 35.0% |
| TAATGAAGTGAATCGAACAC+AGG | + | chr3_2:72229511-72229530 | Msa0422740:intron | 35.0% | |
| AGTTTACATCACATTGGAAG+TGG | + | chr3_2:72229722-72229741 | Msa0422740:CDS | 35.0% | |
| TTAGCTTCTATTCAGAAGAG+AGG | + | chr3_2:72229962-72229981 | Msa0422740:CDS | 35.0% | |
| !!! | CAATGGTTTTGAGGAAGTAT+TGG | + | chr3_2:72229990-72230009 | Msa0422740:CDS | 35.0% |
| GAGGTAAGAAAAGTTTGGTA+AGG | + | chr3_2:72230148-72230167 | Msa0422740:intron | 35.0% | |
| TCATGGCCATCTCAATAATA+GGG | - | chr3_2:72230354-72230373 | None:intergenic | 35.0% | |
| ACTATTGTTGAACAAAGTGC+TGG | + | chr3_2:72230373-72230392 | Msa0422740:CDS | 35.0% | |
| GTCTTGCTAATAATTGCAGA+TGG | + | chr3_2:72230406-72230425 | Msa0422740:CDS | 35.0% | |
| !! | ATTGTTTCTGCTCAGTGATA+GGG | + | chr3_2:72230669-72230688 | Msa0422740:intron | 35.0% |
| GTATTCTGTATCAATGCTTC+TGG | - | chr3_2:72230732-72230751 | None:intergenic | 35.0% | |
| TTTATTGTCTTCTGTTCCTG+TGG | - | chr3_2:72230767-72230786 | None:intergenic | 35.0% | |
| CCTACCAAAACTATTGACAA+TGG | - | chr3_2:72230883-72230902 | None:intergenic | 35.0% | |
| !!! | CCATTGTCAATAGTTTTGGT+AGG | + | chr3_2:72230880-72230899 | Msa0422740:CDS | 35.0% |
| !!! | TCAATAGTTTTGGTAGGAGT+TGG | + | chr3_2:72230886-72230905 | Msa0422740:CDS | 35.0% |
| !!! | CGTTTGACAATTTTCAGGTT+TGG | + | chr3_2:72230962-72230981 | Msa0422740:intron | 35.0% |
| ! | TATCTCCATCAAAGCATCAA+GGG | - | chr3_2:72231137-72231156 | None:intergenic | 35.0% |
| GGAGATACCTTCTCAATATA+AGG | + | chr3_2:72231150-72231169 | Msa0422740:CDS | 35.0% | |
| ATGGTTGCCTTATATTGAGA+AGG | - | chr3_2:72231160-72231179 | None:intergenic | 35.0% | |
| TATAAGGCAACCATAGAACT+TGG | + | chr3_2:72231166-72231185 | Msa0422740:CDS | 35.0% | |
| AACCATAGAACTTGGCTTAT+TGG | + | chr3_2:72231174-72231193 | Msa0422740:CDS | 35.0% | |
| ACCATAGAACTTGGCTTATT+GGG | + | chr3_2:72231175-72231194 | Msa0422740:CDS | 35.0% | |
| !! | TTGTTAGACAGGGTTTTATC+TGG | + | chr3_2:72231231-72231250 | Msa0422740:intron | 35.0% |
| TCATTGATATGAGTAGTGCA+CGG | + | chr3_2:72231292-72231311 | Msa0422740:intron | 35.0% | |
| ! | GCATCAGTGGAAATTCTTTT+CGG | + | chr3_2:72231376-72231395 | Msa0422740:CDS | 35.0% |
| TCATGTAAAGAGCTTGTAGA+TGG | - | chr3_2:72231471-72231490 | None:intergenic | 35.0% | |
| AAATCATGCTTTGCAATGTG+AGG | + | chr3_2:72231504-72231523 | Msa0422740:intron | 35.0% | |
| TTGTGATGACATTAAGGAAG+GGG | - | chr3_2:72231562-72231581 | None:intergenic | 35.0% | |
| GTTGTGATGACATTAAGGAA+GGG | - | chr3_2:72231563-72231582 | None:intergenic | 35.0% | |
| GAATGGTTGTGATGACATTA+AGG | - | chr3_2:72231568-72231587 | None:intergenic | 35.0% | |
| ATAGTGGTTTACCTATGACA+TGG | + | chr3_2:72231618-72231637 | Msa0422740:intron | 35.0% | |
| TAAGTTAGAACATCAGAGTG+AGG | + | chr3_2:72231968-72231987 | Msa0422740:three_prime_UTR | 35.0% | |
| TGGAATTGCAGCTAGAAACT+TGG | + | chr3_2:72228497-72228516 | Msa0422740:CDS | 40.0% | |
| TGAAGGAGATTGTTATGGGA+GGG | + | chr3_2:72228560-72228579 | Msa0422740:CDS | 40.0% | |
| ATGGGAGGGAATAGTTCAAA+AGG | + | chr3_2:72228574-72228593 | Msa0422740:CDS | 40.0% | |
| TGGGAGGGAATAGTTCAAAA+GGG | + | chr3_2:72228575-72228594 | Msa0422740:CDS | 40.0% | |
| ATAGTTCAAAAGGGTCTCCT+AGG | + | chr3_2:72228584-72228603 | Msa0422740:CDS | 40.0% | |
| AAGGCATGTTCCTTCATATG+AGG | + | chr3_2:72228609-72228628 | Msa0422740:CDS | 40.0% | |
| ! | CTTCAGGTTCTTCATCTTCA+TGG | + | chr3_2:72228632-72228651 | Msa0422740:CDS | 40.0% |
| GTTTGATATGGATTCTGCTG+AGG | - | chr3_2:72228703-72228722 | None:intergenic | 40.0% | |
| AACTGAGATAACAGCAAAGG+GGG | + | chr3_2:72229097-72229116 | Msa0422740:intron | 40.0% | |
| ! | TTTCTGCCACTTAAGCAATG+AGG | + | chr3_2:72229189-72229208 | Msa0422740:intron | 40.0% |
| TCCATTCCTCATTGCTTAAG+TGG | - | chr3_2:72229198-72229217 | None:intergenic | 40.0% | |
| ACAAAGAGTAATGAGTGGAC+AGG | + | chr3_2:72229596-72229615 | Msa0422740:CDS | 40.0% | |
| CCATCTCCAAATCCAAAACA+TGG | - | chr3_2:72229821-72229840 | None:intergenic | 40.0% | |
| !! | CCATGTTTTGGATTTGGAGA+TGG | + | chr3_2:72229818-72229837 | Msa0422740:CDS | 40.0% |
| GGATTTGGAGATGGTAACAT+TGG | + | chr3_2:72229827-72229846 | Msa0422740:intron | 40.0% | |
| TCAGAAGAGAGGTTATGCAA+TGG | + | chr3_2:72229973-72229992 | Msa0422740:CDS | 40.0% | |
| !! | GAGGTTATGCAATGGTTTTG+AGG | + | chr3_2:72229981-72230000 | Msa0422740:CDS | 40.0% |
| TTCCAGTCAAGATTCGAACT+CGG | + | chr3_2:72230174-72230193 | Msa0422740:intron | 40.0% | |
| CATGGCCATCTCAATAATAG+GGG | - | chr3_2:72230353-72230372 | None:intergenic | 40.0% | |
| GTCATGGCCATCTCAATAAT+AGG | - | chr3_2:72230355-72230374 | None:intergenic | 40.0% | |
| GCTAATAATTGCAGATGGAC+AGG | + | chr3_2:72230411-72230430 | Msa0422740:CDS | 40.0% | |
| TTGCAGAATTGCAGGCATTT+AGG | - | chr3_2:72230612-72230631 | None:intergenic | 40.0% | |
| !! | TCAAAGCATTGCAGAATTGC+AGG | - | chr3_2:72230620-72230639 | None:intergenic | 40.0% |
| !! | CATTGTTTCTGCTCAGTGAT+AGG | + | chr3_2:72230668-72230687 | Msa0422740:intron | 40.0% |
| TAAATGCGATCGTAAAAGCC+AGG | + | chr3_2:72230783-72230802 | Msa0422740:CDS | 40.0% | |
| ! | TTTTGGTAGGAGTTGGAGAT+GGG | + | chr3_2:72230893-72230912 | Msa0422740:CDS | 40.0% |
| AATTCCTTCATCATCTCCCA+CGG | - | chr3_2:72230919-72230938 | None:intergenic | 40.0% | |
| AATTGTCAAACGCACGAGAA+GGG | - | chr3_2:72230954-72230973 | None:intergenic | 40.0% | |
| AAATTGTCAAACGCACGAGA+AGG | - | chr3_2:72230955-72230974 | None:intergenic | 40.0% | |
| ! | TCGTGCGTTTGACAATTTTC+AGG | + | chr3_2:72230957-72230976 | Msa0422740:CDS | 40.0% |
| AAATCCAAGTCGAAGAGAGA+CGG | + | chr3_2:72231105-72231124 | Msa0422740:CDS | 40.0% | |
| ! | GTATCTCCATCAAAGCATCA+AGG | - | chr3_2:72231138-72231157 | None:intergenic | 40.0% |
| CCATAGAACTTGGCTTATTG+GGG | + | chr3_2:72231176-72231195 | Msa0422740:CDS | 40.0% | |
| TACCTGCCCCTCTTTATAAT+AGG | + | chr3_2:72231343-72231362 | Msa0422740:CDS | 40.0% | |
| ATTCATAGCCGGTATCTCTA+GGG | - | chr3_2:72231425-72231444 | None:intergenic | 40.0% | |
| TATTCATAGCCGGTATCTCT+AGG | - | chr3_2:72231426-72231445 | None:intergenic | 40.0% | |
| ACTGCGTTCATATTCATAGC+CGG | - | chr3_2:72231436-72231455 | None:intergenic | 40.0% | |
| TGTGATGACATTAAGGAAGG+GGG | - | chr3_2:72231561-72231580 | None:intergenic | 40.0% | |
| GGTTGTGATGACATTAAGGA+AGG | - | chr3_2:72231564-72231583 | None:intergenic | 40.0% | |
| ! | TCGCATCGGTAAGACAAATA+GGG | - | chr3_2:72231659-72231678 | None:intergenic | 40.0% |
| ! | TTCGCATCGGTAAGACAAAT+AGG | - | chr3_2:72231660-72231679 | None:intergenic | 40.0% |
| TATTTGTCTTACCGATGCGA+AGG | + | chr3_2:72231659-72231678 | Msa0422740:CDS | 40.0% | |
| TGAGGAAATGCAAAGGAGAA+GGG | - | chr3_2:72231782-72231801 | None:intergenic | 40.0% | |
| TGTCATGTGAGGAAATGCAA+AGG | - | chr3_2:72231789-72231808 | None:intergenic | 40.0% | |
| TTGCATTTCCTCACATGACA+TGG | + | chr3_2:72231789-72231808 | Msa0422740:intron | 40.0% | |
| TCTTAGTAGTGATTGTGCTC+CGG | - | chr3_2:72231862-72231881 | None:intergenic | 40.0% | |
| ! | TGATGATGATGCCTTCAATC+CGG | - | chr3_2:72232074-72232093 | None:intergenic | 40.0% |
| CTGTCTCTGTACAAATTGTC+AGG | + | chr3_2:72232108-72232127 | Msa0422740:three_prime_UTR | 40.0% | |
| GCTAGAAACTTGGACAGCTT+TGG | + | chr3_2:72228507-72228526 | Msa0422740:CDS | 45.0% | |
| CTGAAGGAGATTGTTATGGG+AGG | + | chr3_2:72228559-72228578 | Msa0422740:CDS | 45.0% | |
| GTTCCTTCATATGAGGCTTC+AGG | + | chr3_2:72228616-72228635 | Msa0422740:CDS | 45.0% | |
| GAACCTGAAGCCTCATATGA+AGG | - | chr3_2:72228622-72228641 | None:intergenic | 45.0% | |
| TATGGATTCTGCTGAGGATG+TGG | - | chr3_2:72228697-72228716 | None:intergenic | 45.0% | |
| ! | TGGTGCTGAGGTGTTTGATA+TGG | - | chr3_2:72228715-72228734 | None:intergenic | 45.0% |
| GAGCTGATGCAGATGAAAAC+TGG | - | chr3_2:72228735-72228754 | None:intergenic | 45.0% | |
| GCCACTTAAGCAATGAGGAA+TGG | + | chr3_2:72229194-72229213 | Msa0422740:intron | 45.0% | |
| GTTCCTCAACTCAAACTTGC+AGG | + | chr3_2:72230030-72230049 | Msa0422740:CDS | 45.0% | |
| !! | ACACCTGCAAGTTTGAGTTG+AGG | - | chr3_2:72230036-72230055 | None:intergenic | 45.0% |
| TCAACTCAAACTTGCAGGTG+TGG | + | chr3_2:72230035-72230054 | Msa0422740:intron | 45.0% | |
| !! | TAGAATTCTGGAGTTCGGCT+GGG | + | chr3_2:72230126-72230145 | Msa0422740:intron | 45.0% |
| GCTGGGAGGTAAGAAAAGTT+TGG | + | chr3_2:72230143-72230162 | Msa0422740:intron | 45.0% | |
| TCCAGTCAAGATTCGAACTC+GGG | + | chr3_2:72230175-72230194 | Msa0422740:intron | 45.0% | |
| ATAATAGGGGCGAACGAAGT+CGG | - | chr3_2:72230340-72230359 | None:intergenic | 45.0% | |
| GTTCGCCCCTATTATTGAGA+TGG | + | chr3_2:72230345-72230364 | Msa0422740:CDS | 45.0% | |
| TGAACATGACTGTGCTTGCA+TGG | - | chr3_2:72230549-72230568 | None:intergenic | 45.0% | |
| TCTTCTGTTCCTGTGGACTT+AGG | - | chr3_2:72230760-72230779 | None:intergenic | 45.0% | |
| !! | GTTTTGGTAGGAGTTGGAGA+TGG | + | chr3_2:72230892-72230911 | Msa0422740:CDS | 45.0% |
| ! | GTGATAATGTTGTCTGTGGC+TGG | + | chr3_2:72231037-72231056 | Msa0422740:intron | 45.0% |
| GTTTGCCCTTGATGCTTTGA+TGG | + | chr3_2:72231129-72231148 | Msa0422740:CDS | 45.0% | |
| CCCCAATAAGCCAAGTTCTA+TGG | - | chr3_2:72231179-72231198 | None:intergenic | 45.0% | |
| TTGATATGAGTAGTGCACGG+AGG | + | chr3_2:72231295-72231314 | Msa0422740:intron | 45.0% | |
| TGATATGAGTAGTGCACGGA+GGG | + | chr3_2:72231296-72231315 | Msa0422740:intron | 45.0% | |
| TTATAAAGAGGGGCAGGTAG+AGG | - | chr3_2:72231342-72231361 | None:intergenic | 45.0% | |
| GTCCTATTATAAAGAGGGGC+AGG | - | chr3_2:72231348-72231367 | None:intergenic | 45.0% | |
| AGGACTTCTTCAAGCATCAG+TGG | + | chr3_2:72231363-72231382 | Msa0422740:CDS | 45.0% | |
| GTGATGACATTAAGGAAGGG+GGG | - | chr3_2:72231560-72231579 | None:intergenic | 45.0% | |
| TCTTACCGATGCGAAGGATA+TGG | + | chr3_2:72231665-72231684 | Msa0422740:CDS | 45.0% | |
| GTGAGGAAATGCAAAGGAGA+AGG | - | chr3_2:72231783-72231802 | None:intergenic | 45.0% | |
| !! | ATGACATGGCAGACTTGTTG+TGG | + | chr3_2:72231803-72231822 | Msa0422740:intron | 45.0% |
| TTCAGTTCTGTCCCATTTGC+CGG | + | chr3_2:72231840-72231859 | Msa0422740:CDS | 45.0% | |
| CTTCAATCCGGACAATGTAC+AGG | - | chr3_2:72232062-72232081 | None:intergenic | 45.0% | |
| CTGTACATTGTCCGGATTGA+AGG | + | chr3_2:72232060-72232079 | Msa0422740:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | + | chr3_2:72228946-72228965 | Msa0422740:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGT+GGG | + | chr3_2:72228947-72228966 | Msa0422740:intron | 5.0% |
| !! | ATATTAAGTTATAAATATTA+AGG | + | chr3_2:72231733-72231752 | Msa0422740:intron | 5.0% |
| !! | TATTAAGTTATAAATATTAA+GGG | + | chr3_2:72231734-72231753 | Msa0422740:intron | 5.0% |
| CAAAAGGGTCTCCTAGGAGA+AGG | + | chr3_2:72228590-72228609 | Msa0422740:CDS | 50.0% | |
| GAAGGAACATGCCTTCTCCT+AGG | - | chr3_2:72228604-72228623 | None:intergenic | 50.0% | |
| TGAGGATGTGGTGATTGTGG+TGG | - | chr3_2:72228685-72228704 | None:intergenic | 50.0% | |
| TGCTGAGGATGTGGTGATTG+TGG | - | chr3_2:72228688-72228707 | None:intergenic | 50.0% | |
| ! | GCAGATGAAAACTGGTGCTG+AGG | - | chr3_2:72228727-72228746 | None:intergenic | 50.0% |
| TGGGGTTAGAATGGGACCAA+AGG | + | chr3_2:72228966-72228985 | Msa0422740:intron | 50.0% | |
| ACTGCTGCTCTTGCAAATGC+TGG | + | chr3_2:72229536-72229555 | Msa0422740:CDS | 50.0% | |
| CTGCTGCTCTTGCAAATGCT+GGG | + | chr3_2:72229537-72229556 | Msa0422740:CDS | 50.0% | |
| TCTTAACCCTTCGGTTCCCT+GGG | + | chr3_2:72230094-72230113 | Msa0422740:intron | 50.0% | |
| CCGAACTCCAGAATTCTAGG+CGG | - | chr3_2:72230124-72230143 | None:intergenic | 50.0% | |
| !! | CCGCCTAGAATTCTGGAGTT+CGG | + | chr3_2:72230121-72230140 | Msa0422740:intron | 50.0% |
| CAGCCGAACTCCAGAATTCT+AGG | - | chr3_2:72230127-72230146 | None:intergenic | 50.0% | |
| !! | CTAGAATTCTGGAGTTCGGC+TGG | + | chr3_2:72230125-72230144 | Msa0422740:intron | 50.0% |
| ACCCGAGTTCGAATCTTGAC+TGG | - | chr3_2:72230179-72230198 | None:intergenic | 50.0% | |
| TCAATGCTTCTGGTCACCTG+CGG | - | chr3_2:72230722-72230741 | None:intergenic | 50.0% | |
| ATACGGCAACCTAAGTCCAC+AGG | + | chr3_2:72230748-72230767 | Msa0422740:CDS | 50.0% | |
| TAATGTTGTCTGTGGCTGGC+TGG | + | chr3_2:72231041-72231060 | Msa0422740:intron | 50.0% | |
| AACTCCGTCTCTCTTCGACT+TGG | - | chr3_2:72231112-72231131 | None:intergenic | 50.0% | |
| GATATGAGTAGTGCACGGAG+GGG | + | chr3_2:72231297-72231316 | Msa0422740:intron | 50.0% | |
| ! | CAGAGTGTCCCTAGAGATAC+CGG | + | chr3_2:72231414-72231433 | Msa0422740:CDS | 50.0% |
| CCTGCAGTCAACCATGTCAT+AGG | - | chr3_2:72231632-72231651 | None:intergenic | 50.0% | |
| CCTATGACATGGTTGACTGC+AGG | + | chr3_2:72231629-72231648 | Msa0422740:intron | 50.0% | |
| GAAGGCCATATCCTTCGCAT+CGG | - | chr3_2:72231673-72231692 | None:intergenic | 50.0% | |
| GATGCGAAGGATATGGCCTT+CGG | + | chr3_2:72231672-72231691 | Msa0422740:CDS | 50.0% | |
| CAAGTCTGCCATGTCATGTG+AGG | - | chr3_2:72231800-72231819 | None:intergenic | 50.0% | |
| !! | TGGCAGACTTGTTGTGGATG+TGG | + | chr3_2:72231809-72231828 | Msa0422740:intron | 50.0% |
| GGCAAATGGGACAGAACTGA+AGG | - | chr3_2:72231841-72231860 | None:intergenic | 50.0% | |
| GTGATTGTGCTCCGGCAAAT+GGG | - | chr3_2:72231854-72231873 | None:intergenic | 50.0% | |
| AGTGATTGTGCTCCGGCAAA+TGG | - | chr3_2:72231855-72231874 | None:intergenic | 50.0% | |
| CAGTCCTCCTGTACATTGTC+CGG | + | chr3_2:72232052-72232071 | Msa0422740:three_prime_UTR | 50.0% | |
| CAATCCGGACAATGTACAGG+AGG | - | chr3_2:72232059-72232078 | None:intergenic | 50.0% | |
| TGCTCTTGCAAATGCTGGGC+TGG | + | chr3_2:72229541-72229560 | Msa0422740:CDS | 55.0% | |
| GTCTTAACCCTTCGGTTCCC+TGG | + | chr3_2:72230093-72230112 | Msa0422740:intron | 55.0% | |
| AATTCTAGGCGGCCTTCCCA+GGG | - | chr3_2:72230113-72230132 | None:intergenic | 55.0% | |
| !! | AATTCTGGAGTTCGGCTGGG+AGG | + | chr3_2:72230129-72230148 | Msa0422740:intron | 55.0% |
| GCAGGTAGAGGAACCCTATC+CGG | - | chr3_2:72231330-72231349 | None:intergenic | 55.0% | |
| AAGGATATGGCCTTCGGCTG+TGG | + | chr3_2:72231678-72231697 | Msa0422740:CDS | 55.0% | |
| TACCTGATGTCCACAGCCGA+AGG | - | chr3_2:72231691-72231710 | None:intergenic | 55.0% | |
| CGGACAATGTACAGGAGGAC+TGG | - | chr3_2:72232054-72232073 | None:intergenic | 55.0% | |
| AACCCTTCGGTTCCCTGGGA+AGG | + | chr3_2:72230098-72230117 | Msa0422740:intron | 60.0% | |
| GAATTCTAGGCGGCCTTCCC+AGG | - | chr3_2:72230114-72230133 | None:intergenic | 60.0% | |
| GGGAAGGCCGCCTAGAATTC+TGG | + | chr3_2:72230114-72230133 | Msa0422740:intron | 60.0% | |
| TTCTGGTCACCTGCGGCAAC+AGG | - | chr3_2:72230715-72230734 | None:intergenic | 60.0% | |
| TAGGAGTTGGAGATGGGCCG+TGG | + | chr3_2:72230899-72230918 | Msa0422740:CDS | 60.0% | |
| AGGAGTTGGAGATGGGCCGT+GGG | + | chr3_2:72230900-72230919 | Msa0422740:CDS | 60.0% | |
| TGGGCCGTGGGAGATGATGA+AGG | + | chr3_2:72230912-72230931 | Msa0422740:CDS | 60.0% | |
| GAGGGGACATTCGCCGGATA+GGG | + | chr3_2:72231314-72231333 | Msa0422740:CDS | 60.0% | |
| GGCCTTCCCAGGGAACCGAA+GGG | - | chr3_2:72230103-72230122 | None:intergenic | 65.0% | |
| GATGCTCAGCCTGTTGCCGC+AGG | + | chr3_2:72230703-72230722 | Msa0422740:intron | 65.0% | |
| TGCACGGAGGGGACATTCGC+CGG | + | chr3_2:72231308-72231327 | Msa0422740:CDS | 65.0% | |
| GGAGGGGACATTCGCCGGAT+AGG | + | chr3_2:72231313-72231332 | Msa0422740:CDS | 65.0% | |
| GGCCTTCGGCTGTGGACATC+AGG | + | chr3_2:72231686-72231705 | Msa0422740:CDS | 65.0% | |
| CGGCCTTCCCAGGGAACCGA+AGG | - | chr3_2:72230104-72230123 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72228496 | 72232258 | 72228496 | ID=Msa0422740;Name=Msa0422740 |
| chr3_2 | mRNA | 72228496 | 72232258 | 72228496 | ID=Msa0422740-mRNA-1;Parent=Msa0422740;Name=Msa0422740-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|1|0.90|1|1|1|11|363|473 |
| chr3_2 | exon | 72228496 | 72228837 | 72228496 | ID=Msa0422740-mRNA-1:exon:17788;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72229533 | 72229617 | 72229533 | ID=Msa0422740-mRNA-1:exon:17789;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72229699 | 72229839 | 72229699 | ID=Msa0422740-mRNA-1:exon:17790;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72229938 | 72230051 | 72229938 | ID=Msa0422740-mRNA-1:exon:17791;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72230335 | 72230432 | 72230335 | ID=Msa0422740-mRNA-1:exon:17792;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72230725 | 72230804 | 72230725 | ID=Msa0422740-mRNA-1:exon:17793;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72230873 | 72230978 | 72230873 | ID=Msa0422740-mRNA-1:exon:17794;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72231070 | 72231197 | 72231070 | ID=Msa0422740-mRNA-1:exon:17795;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72231308 | 72231497 | 72231308 | ID=Msa0422740-mRNA-1:exon:17796;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72231651 | 72231707 | 72231651 | ID=Msa0422740-mRNA-1:exon:17797;Parent=Msa0422740-mRNA-1 |
| chr3_2 | exon | 72231815 | 72232258 | 72231815 | ID=Msa0422740-mRNA-1:exon:17798;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72228496 | 72228837 | 72228496 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72229533 | 72229617 | 72229533 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72229699 | 72229839 | 72229699 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72229938 | 72230051 | 72229938 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72230335 | 72230432 | 72230335 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72230725 | 72230804 | 72230725 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72230873 | 72230978 | 72230873 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72231070 | 72231197 | 72231070 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72231308 | 72231497 | 72231308 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72231651 | 72231707 | 72231651 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | CDS | 72231815 | 72231895 | 72231815 | ID=Msa0422740-mRNA-1:cds;Parent=Msa0422740-mRNA-1 |
| chr3_2 | three_prime_UTR | 72231896 | 72232258 | 72231896 | ID=Msa0422740-mRNA-1:three_prime_utr;Parent=Msa0422740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
