Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514750 | XP_003601893.2 | 98.097 | 473 | 6 | 1 | 35 | 507 | 1 | 470 | 0.0 | 971 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514750 | sp|Q8LB88|RGLG5_ARATH | 65.179 | 448 | 140 | 4 | 61 | 507 | 1 | 433 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514750 | G7J349 | 98.097 | 473 | 6 | 1 | 35 | 507 | 1 | 470 | 0.0 | 971 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0514750 | -0.809255 | 2.071442e-50 | -8.615850e-47 |
| Msa0011040 | Msa0514750 | 0.808191 | 3.496538e-50 | -8.615850e-47 |
| Msa0013270 | Msa0514750 | 0.813764 | 2.169602e-51 | -8.615850e-47 |
| Msa0038150 | Msa0514750 | -0.827457 | 1.548186e-54 | -8.615850e-47 |
| Msa0048380 | Msa0514750 | 0.807829 | 4.174137e-50 | -8.615850e-47 |
| Msa0062190 | Msa0514750 | 0.804381 | 2.219948e-49 | -8.615850e-47 |
| Msa0078160 | Msa0514750 | -0.804053 | 2.597639e-49 | -8.615850e-47 |
| Msa0080100 | Msa0514750 | -0.803051 | 4.191226e-49 | -8.615850e-47 |
| Msa0106540 | Msa0514750 | 0.806795 | 6.916132e-50 | -8.615850e-47 |
| Msa0111780 | Msa0514750 | 0.816962 | 4.220134e-52 | -8.615850e-47 |
| Msa0117650 | Msa0514750 | 0.811522 | 6.712384e-51 | -8.615850e-47 |
| Msa0121470 | Msa0514750 | 0.831132 | 1.984919e-55 | -8.615850e-47 |
| Msa0121490 | Msa0514750 | 0.836054 | 1.171659e-56 | -8.615850e-47 |
| Msa0126430 | Msa0514750 | 0.813659 | 2.288277e-51 | -8.615850e-47 |
| Msa0183730 | Msa0514750 | 0.823084 | 1.675437e-53 | -8.615850e-47 |
| Msa0193680 | Msa0514750 | 0.809213 | 2.114706e-50 | -8.615850e-47 |
| Msa0206370 | Msa0514750 | 0.826313 | 2.905550e-54 | -8.615850e-47 |
| Msa0213590 | Msa0514750 | -0.803360 | 3.618616e-49 | -8.615850e-47 |
| Msa0219720 | Msa0514750 | -0.801877 | 7.317523e-49 | -8.615850e-47 |
| Msa0221180 | Msa0514750 | 0.815496 | 8.974531e-52 | -8.615850e-47 |
| Msa0369580 | Msa0514750 | -0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa0371350 | Msa0514750 | -0.800158 | 1.643646e-48 | -8.615850e-47 |
| Msa0412580 | Msa0514750 | -0.805130 | 1.548542e-49 | -8.615850e-47 |
| Msa0422650 | Msa0514750 | 0.981089 | 9.502967e-152 | -8.615850e-47 |
| Msa0422740 | Msa0514750 | 0.984733 | 1.996163e-161 | -8.615850e-47 |
| Msa0422960 | Msa0514750 | 0.983753 | 1.302344e-158 | -8.615850e-47 |
| Msa0468940 | Msa0514750 | 0.859128 | 5.122177e-63 | -8.615850e-47 |
| Msa0474660 | Msa0514750 | -0.807396 | 5.158623e-50 | -8.615850e-47 |
| Msa0480900 | Msa0514750 | -0.852280 | 5.121687e-61 | -8.615850e-47 |
| Msa0261020 | Msa0514750 | -0.832431 | 9.488904e-56 | -8.615850e-47 |
| Msa0262750 | Msa0514750 | 0.802415 | 5.671279e-49 | -8.615850e-47 |
| Msa0264230 | Msa0514750 | 0.808520 | 2.974973e-50 | -8.615850e-47 |
| Msa0271700 | Msa0514750 | 0.813689 | 2.253770e-51 | -8.615850e-47 |
| Msa0271720 | Msa0514750 | 0.815331 | 9.765895e-52 | -8.615850e-47 |
| Msa0275730 | Msa0514750 | 0.806762 | 7.027319e-50 | -8.615850e-47 |
| Msa0278920 | Msa0514750 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa0292060 | Msa0514750 | -0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0293060 | Msa0514750 | -0.809141 | 2.191416e-50 | -8.615850e-47 |
| Msa0300470 | Msa0514750 | 0.828985 | 6.631067e-55 | -8.615850e-47 |
| Msa0320170 | Msa0514750 | 0.803516 | 3.358840e-49 | -8.615850e-47 |
| Msa0336430 | Msa0514750 | 0.801686 | 8.008083e-49 | -8.615850e-47 |
| Msa0336460 | Msa0514750 | 0.813667 | 2.279598e-51 | -8.615850e-47 |
| Msa0336550 | Msa0514750 | -0.832024 | 1.196707e-55 | -8.615850e-47 |
| Msa0337970 | Msa0514750 | 0.822351 | 2.481511e-53 | -8.615850e-47 |
| Msa0345890 | Msa0514750 | 0.803589 | 3.243835e-49 | -8.615850e-47 |
| Msa0350180 | Msa0514750 | 0.810547 | 1.091718e-50 | -8.615850e-47 |
| Msa0357470 | Msa0514750 | 0.823670 | 1.222588e-53 | -8.615850e-47 |
| Msa0357510 | Msa0514750 | 0.839997 | 1.133458e-57 | -8.615850e-47 |
| Msa0357530 | Msa0514750 | 0.816796 | 4.596147e-52 | -8.615850e-47 |
| Msa0357560 | Msa0514750 | 0.801498 | 8.754501e-49 | -8.615850e-47 |
| Msa0484590 | Msa0514750 | -0.815211 | 1.038260e-51 | -8.615850e-47 |
| Msa0514750 | Msa0524310 | 0.822755 | 1.998602e-53 | -8.615850e-47 |
| Msa0514750 | Msa0524420 | 0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0514750 | Msa0524710 | 0.811263 | 7.642472e-51 | -8.615850e-47 |
| Msa0514750 | Msa0525180 | -0.811093 | 8.319863e-51 | -8.615850e-47 |
| Msa0514750 | Msa0557240 | 0.842587 | 2.360672e-58 | -8.615850e-47 |
| Msa0514750 | Msa0561830 | 0.853464 | 2.349560e-61 | -8.615850e-47 |
| Msa0514750 | Msa0567570 | 0.805163 | 1.524031e-49 | -8.615850e-47 |
| Msa0514750 | Msa0577030 | 0.802001 | 6.902124e-49 | -8.615850e-47 |
| Msa0514750 | Msa0580410 | -0.807762 | 4.315061e-50 | -8.615850e-47 |
| Msa0514750 | Msa0580890 | -0.802369 | 5.797958e-49 | -8.615850e-47 |
| Msa0514750 | Msa0587730 | 0.802912 | 4.479063e-49 | -8.615850e-47 |
| Msa0514750 | Msa0597800 | 0.819142 | 1.356239e-52 | -8.615850e-47 |
| Msa0514750 | Msa0597820 | 0.819644 | 1.042231e-52 | -8.615850e-47 |
| Msa0514750 | Msa0614960 | 0.850271 | 1.891460e-60 | -8.615850e-47 |
| Msa0514750 | Msa0619530 | -0.802904 | 4.496365e-49 | -8.615850e-47 |
| Msa0514750 | Msa0622800 | -0.830406 | 2.989947e-55 | -8.615850e-47 |
| Msa0514750 | Msa0637590 | 0.815633 | 8.363644e-52 | -8.615850e-47 |
| Msa0514750 | Msa0637700 | 0.814325 | 1.632122e-51 | -8.615850e-47 |
| Msa0514750 | Msa0652590 | 0.836471 | 9.177978e-57 | -8.615850e-47 |
| Msa0514750 | Msa0655370 | 0.852365 | 4.843811e-61 | -8.615850e-47 |
| Msa0514750 | Msa0659580 | -0.800646 | 1.307408e-48 | -8.615850e-47 |
| Msa0514750 | Msa0667680 | -0.803539 | 3.322590e-49 | -8.615850e-47 |
| Msa0514750 | Msa0667840 | -0.812013 | 5.248581e-51 | -8.615850e-47 |
| Msa0514750 | Msa0685390 | -0.815282 | 1.001458e-51 | -8.615850e-47 |
| Msa0514750 | Msa0694320 | 0.805507 | 1.291386e-49 | -8.615850e-47 |
| Msa0514750 | Msa0699170 | 0.856246 | 3.662813e-62 | -8.615850e-47 |
| Msa0514750 | Msa0707330 | 0.811613 | 6.414636e-51 | -8.615850e-47 |
| Msa0514750 | Msa0714230 | -0.811635 | 6.344428e-51 | -8.615850e-47 |
| Msa0514750 | Msa0729740 | -0.803367 | 3.605596e-49 | -8.615850e-47 |
| Msa0514750 | Msa0731580 | 0.812549 | 4.008783e-51 | -8.615850e-47 |
| Msa0514750 | Msa0743370 | 0.812657 | 3.797476e-51 | -8.615850e-47 |
| Msa0514750 | Msa0745160 | 0.842452 | 2.564290e-58 | -8.615850e-47 |
| Msa0514750 | Msa0750200 | -0.803205 | 3.895991e-49 | -8.615850e-47 |
| Msa0514750 | Msa0750790 | 0.806598 | 7.611793e-50 | -8.615850e-47 |
| Msa0514750 | Msa0750830 | 0.803819 | 2.905674e-49 | -8.615850e-47 |
| Msa0514750 | Msa0766910 | -0.822304 | 2.544103e-53 | -8.615850e-47 |
| Msa0514750 | Msa0776660 | 0.809532 | 1.806235e-50 | -8.615850e-47 |
| Msa0514750 | Msa0795910 | -0.808358 | 3.220759e-50 | -8.615850e-47 |
| Msa0514750 | Msa0809920 | 0.803621 | 3.194715e-49 | -8.615850e-47 |
| Msa0514750 | Msa0814660 | 0.804713 | 1.892663e-49 | -8.615850e-47 |
| Msa0514750 | Msa0817190 | 0.841325 | 5.088160e-58 | -8.615850e-47 |
| Msa0514750 | Msa0822680 | -0.814029 | 1.897135e-51 | -8.615850e-47 |
| Msa0514750 | Msa0827340 | -0.825274 | 5.124879e-54 | -8.615850e-47 |
| Msa0514750 | Msa0829250 | -0.810925 | 9.043591e-51 | -8.615850e-47 |
| Msa0514750 | Msa0830930 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa0514750 | Msa0833360 | -0.808687 | 2.739833e-50 | -8.615850e-47 |
| Msa0514750 | Msa0865430 | 0.800492 | 1.405317e-48 | -8.615850e-47 |
| Msa0514750 | Msa0964400 | -0.813806 | 2.124528e-51 | -8.615850e-47 |
| Msa0514750 | Msa0978980 | 0.800119 | 1.673544e-48 | -8.615850e-47 |
| Msa0514750 | Msa1001120 | 0.805472 | 1.312906e-49 | -8.615850e-47 |
| Msa0514750 | Msa1027910 | 0.837247 | 5.817090e-57 | -8.615850e-47 |
| Msa0514750 | Msa1030210 | 0.812917 | 3.330054e-51 | -8.615850e-47 |
| Msa0514750 | Msa1035050 | 0.808509 | 2.990630e-50 | -8.615850e-47 |
| Msa0514750 | Msa1039150 | -0.805759 | 1.143096e-49 | -8.615850e-47 |
| Msa0514750 | Msa1040330 | 0.807559 | 4.765011e-50 | -8.615850e-47 |
| Msa0514750 | Msa1042300 | 0.800210 | 1.604087e-48 | -8.615850e-47 |
| Msa0514750 | Msa1058550 | -0.807268 | 5.493289e-50 | -8.615850e-47 |
| Msa0514750 | Msa1075090 | 0.822195 | 2.697349e-53 | -8.615850e-47 |
| Msa0514750 | Msa1078120 | -0.815896 | 7.308207e-52 | -8.615850e-47 |
| Msa0514750 | Msa1083660 | -0.814039 | 1.887546e-51 | -8.615850e-47 |
| Msa0514750 | Msa1084890 | 0.844634 | 6.695879e-59 | -8.615850e-47 |
| Msa0514750 | Msa1107220 | 0.803987 | 2.681685e-49 | -8.615850e-47 |
| Msa0514750 | Msa1113090 | 0.800858 | 1.183131e-48 | -8.615850e-47 |
| Msa0514750 | Msa1115980 | 0.801572 | 8.453969e-49 | -8.615850e-47 |
| Msa0514750 | Msa1120580 | 0.808124 | 3.613818e-50 | -8.615850e-47 |
| Msa0514750 | Msa1120960 | 0.809848 | 1.544512e-50 | -8.615850e-47 |
| Msa0514750 | Msa1132880 | -0.808537 | 2.949408e-50 | -8.615850e-47 |
| Msa0514750 | Msa1136690 | 0.814691 | 1.354568e-51 | -8.615850e-47 |
| Msa0514750 | Msa1156100 | -0.805123 | 1.553676e-49 | -8.615850e-47 |
| Msa0514750 | Msa1156740 | 0.803179 | 3.944596e-49 | -8.615850e-47 |
| Msa0514750 | Msa1191270 | 0.828705 | 7.750530e-55 | -8.615850e-47 |
| Msa0514750 | Msa1191530 | -0.818290 | 2.117418e-52 | -8.615850e-47 |
| Msa0514750 | Msa1192360 | 0.811850 | 5.696689e-51 | -8.615850e-47 |
| Msa0514750 | Msa1198360 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
| Msa0514750 | Msa1204870 | -0.801370 | 9.298350e-49 | -8.615850e-47 |
| Msa0514750 | Msa1204900 | -0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0514750 | Msa1217890 | 0.811502 | 6.781938e-51 | -8.615850e-47 |
| Msa0514750 | Msa1220340 | 0.808970 | 2.384295e-50 | -8.615850e-47 |
| Msa0514750 | Msa1223990 | 0.803357 | 3.624036e-49 | -8.615850e-47 |
| Msa0514750 | Msa1231440 | 0.801653 | 8.134621e-49 | -8.615850e-47 |
| Msa0514750 | Msa1246830 | 0.817995 | 2.469576e-52 | -8.615850e-47 |
| Msa0514750 | Msa1256490 | -0.806147 | 9.473541e-50 | -8.615850e-47 |
| Msa0514750 | Msa1265940 | 0.825809 | 3.828980e-54 | -8.615850e-47 |
| Msa0514750 | Msa1283070 | 0.814512 | 1.483594e-51 | -8.615850e-47 |
| Msa0514750 | Msa1287100 | -0.816554 | 5.207649e-52 | -8.615850e-47 |
| Msa0514750 | Msa1288070 | 0.819279 | 1.262282e-52 | -8.615850e-47 |
| Msa0514750 | Msa1290090 | -0.800258 | 1.568338e-48 | -8.615850e-47 |
| Msa0514750 | Msa1296810 | -0.802112 | 6.548793e-49 | -8.615850e-47 |
| Msa0514750 | Msa1303400 | 0.873923 | 1.008834e-67 | -8.615850e-47 |
| Msa0514750 | Msa1320160 | 0.821897 | 3.162611e-53 | -8.615850e-47 |
| Msa0514750 | Msa1331570 | -0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0514750 | Msa1381300 | -0.812884 | 3.386842e-51 | -8.615850e-47 |
| Msa0514750 | Msa1386180 | -0.800712 | 1.267078e-48 | -8.615850e-47 |
| Msa0514750 | Msa1405040 | -0.808874 | 2.499563e-50 | -8.615850e-47 |
| Msa0514750 | Msa1405830 | 0.806650 | 7.419406e-50 | -8.615850e-47 |
| Msa0514750 | Msa1407810 | 0.801076 | 1.067711e-48 | -8.615850e-47 |
| Msa0514750 | Msa1408230 | -0.801152 | 1.030385e-48 | -8.615850e-47 |
| Msa0514750 | Msa1431020 | 0.834253 | 3.334937e-56 | -8.615850e-47 |
| Msa0514750 | Msa1437590 | 0.811440 | 6.993339e-51 | -8.615850e-47 |
| Msa0514750 | Msa1437780 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0514750 | Msa1447140 | 0.803903 | 2.792043e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514750 | MtrunA17_Chr3g0123481 | 98.097 | 473 | 6 | 1 | 35 | 507 | 1 | 470 | 0.0 | 971 |
| Msa0514750 | MtrunA17_Chr8g0381321 | 74.689 | 482 | 106 | 7 | 35 | 507 | 1 | 475 | 0.0 | 719 |
| Msa0514750 | MtrunA17_Chr6g0458051 | 63.340 | 491 | 131 | 7 | 61 | 507 | 1 | 486 | 0.0 | 603 |
| Msa0514750 | MtrunA17_Chr7g0226791 | 64.901 | 453 | 145 | 6 | 61 | 507 | 1 | 445 | 0.0 | 577 |
| Msa0514750 | MtrunA17_Chr3g0116661 | 68.345 | 417 | 115 | 5 | 99 | 507 | 28 | 435 | 0.0 | 571 |
| Msa0514750 | MtrunA17_Chr3g0130411 | 57.271 | 447 | 153 | 7 | 73 | 507 | 17 | 437 | 2.16e-172 | 493 |
| Msa0514750 | MtrunA17_Chr2g0309781 | 55.825 | 412 | 140 | 4 | 96 | 507 | 32 | 401 | 9.68e-161 | 462 |
| Msa0514750 | MtrunA17_Chr2g0309791 | 58.961 | 385 | 130 | 4 | 124 | 507 | 58 | 415 | 1.08e-159 | 459 |
| Msa0514750 | MtrunA17_Chr8g0356381 | 58.961 | 385 | 128 | 5 | 129 | 507 | 45 | 405 | 1.16e-152 | 441 |
| Msa0514750 | MtrunA17_Chr2g0309821 | 55.844 | 385 | 131 | 3 | 96 | 480 | 26 | 371 | 1.11e-146 | 425 |
| Msa0514750 | MtrunA17_Chr6g0488251 | 58.232 | 328 | 106 | 3 | 180 | 507 | 9 | 305 | 8.69e-136 | 394 |
| Msa0514750 | MtrunA17_Chr6g0488261 | 65.965 | 285 | 94 | 2 | 135 | 418 | 2 | 284 | 1.39e-134 | 392 |
| Msa0514750 | MtrunA17_Chr7g0250181 | 64.571 | 175 | 46 | 2 | 194 | 352 | 11 | 185 | 1.02e-74 | 234 |
| Msa0514750 | MtrunA17_Chr7g0250151 | 65.289 | 121 | 42 | 0 | 176 | 296 | 4 | 124 | 1.33e-48 | 164 |
| Msa0514750 | MtrunA17_Chr8g0385701 | 35.156 | 256 | 122 | 12 | 156 | 391 | 337 | 568 | 1.08e-22 | 101 |
| Msa0514750 | MtrunA17_Chr1g0170101 | 32.016 | 253 | 123 | 10 | 162 | 391 | 298 | 524 | 8.86e-21 | 95.5 |
| Msa0514750 | MtrunA17_Chr7g0273481 | 32.271 | 251 | 121 | 11 | 162 | 389 | 338 | 562 | 4.65e-20 | 93.6 |
| Msa0514750 | MtrunA17_Chr7g0273401 | 34.973 | 183 | 89 | 7 | 164 | 333 | 1 | 166 | 6.28e-20 | 87.4 |
| Msa0514750 | MtrunA17_Chr7g0250161 | 55.882 | 68 | 28 | 1 | 294 | 359 | 17 | 84 | 4.90e-19 | 83.6 |
| Msa0514750 | MtrunA17_Chr8g0356391 | 62.222 | 45 | 17 | 0 | 463 | 507 | 510 | 554 | 2.30e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514750 | AT1G67800.2 | 63.656 | 465 | 153 | 4 | 44 | 507 | 4 | 453 | 0.0 | 584 |
| Msa0514750 | AT1G67800.4 | 65.179 | 448 | 140 | 4 | 61 | 507 | 1 | 433 | 0.0 | 580 |
| Msa0514750 | AT1G67800.1 | 65.179 | 448 | 140 | 4 | 61 | 507 | 1 | 433 | 0.0 | 580 |
| Msa0514750 | AT1G67800.3 | 65.179 | 448 | 140 | 4 | 61 | 507 | 1 | 433 | 0.0 | 580 |
| Msa0514750 | AT1G67800.6 | 65.179 | 448 | 140 | 4 | 61 | 507 | 1 | 433 | 0.0 | 580 |
| Msa0514750 | AT5G14420.3 | 71.216 | 403 | 113 | 2 | 108 | 507 | 66 | 468 | 0.0 | 575 |
| Msa0514750 | AT5G14420.2 | 71.216 | 403 | 113 | 2 | 108 | 507 | 66 | 468 | 0.0 | 575 |
| Msa0514750 | AT5G14420.4 | 71.216 | 403 | 113 | 2 | 108 | 507 | 66 | 468 | 0.0 | 575 |
| Msa0514750 | AT5G14420.1 | 71.216 | 403 | 113 | 2 | 108 | 507 | 66 | 468 | 0.0 | 575 |
| Msa0514750 | AT3G01650.2 | 72.823 | 379 | 91 | 3 | 129 | 507 | 123 | 489 | 0.0 | 568 |
| Msa0514750 | AT3G01650.1 | 72.823 | 379 | 91 | 3 | 129 | 507 | 123 | 489 | 0.0 | 568 |
| Msa0514750 | AT1G67800.5 | 62.143 | 420 | 143 | 2 | 44 | 463 | 4 | 407 | 3.86e-180 | 511 |
| Msa0514750 | AT5G63970.2 | 59.947 | 377 | 135 | 3 | 131 | 507 | 6 | 366 | 1.73e-158 | 455 |
| Msa0514750 | AT5G63970.1 | 59.947 | 377 | 135 | 3 | 131 | 507 | 6 | 366 | 1.73e-158 | 455 |
| Msa0514750 | AT1G79380.1 | 54.813 | 374 | 145 | 2 | 134 | 507 | 51 | 400 | 6.70e-144 | 419 |
| Msa0514750 | AT1G24545.1 | 51.376 | 109 | 15 | 1 | 177 | 285 | 46 | 116 | 1.60e-26 | 106 |
| Msa0514750 | AT5G07300.1 | 33.865 | 251 | 116 | 13 | 162 | 389 | 344 | 567 | 5.20e-21 | 97.1 |
| Msa0514750 | AT5G61910.4 | 33.068 | 251 | 118 | 12 | 162 | 389 | 1109 | 1332 | 1.73e-20 | 95.9 |
| Msa0514750 | AT5G61900.3 | 33.068 | 251 | 118 | 12 | 162 | 389 | 341 | 564 | 3.20e-20 | 94.4 |
| Msa0514750 | AT5G61900.1 | 33.068 | 251 | 118 | 12 | 162 | 389 | 341 | 564 | 3.20e-20 | 94.4 |
| Msa0514750 | AT1G08860.1 | 32.143 | 252 | 119 | 12 | 162 | 389 | 344 | 567 | 1.38e-19 | 92.4 |
Find 138 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGTGAATTCTCATAAAA+TGG | 0.146917 | 3_4:+65545678 | None:intergenic |
| GAACAAGCAATCTCTATTAT+TGG | 0.182085 | 3_4:-65544682 | Msa0514750:CDS |
| ACCATAGAACTTGGCTTATT+GGG | 0.205055 | 3_4:-65543265 | Msa0514750:CDS |
| AACCATAGAACTTGGCTTAT+TGG | 0.212397 | 3_4:-65543266 | Msa0514750:CDS |
| CTTCAGGTTCTTCATCTTCA+TGG | 0.241413 | 3_4:-65545800 | Msa0514750:CDS |
| GATAACTTGATTCCATGTTT+TGG | 0.258307 | 3_4:-65544634 | Msa0514750:CDS |
| GTCATGGCCATCTCAATAAT+AGG | 0.280344 | 3_4:+65544088 | None:intergenic |
| TTCAGTTCTGTCCCATTTGC+CGG | 0.293044 | 3_4:-65542600 | Msa0514750:CDS |
| CCCCAATAAGCCAAGTTCTA+TGG | 0.299468 | 3_4:+65543264 | None:intergenic |
| TCTTACCGATGCGAAGGATA+TGG | 0.302947 | 3_4:-65542775 | Msa0514750:CDS |
| GTCGTTCTTTCTATTAAGTA+TGG | 0.304457 | 3_4:-65542274 | Msa0514750:three_prime_UTR |
| TTCGCATCGGTAAGACAAAT+AGG | 0.311510 | 3_4:+65542783 | None:intergenic |
| GTTCCTTCATATGAGGCTTC+AGG | 0.316189 | 3_4:-65545816 | Msa0514750:CDS |
| TCCATGTAGTTTCTGATTGT+GGG | 0.325618 | 3_4:-65546710 | Msa0514750:CDS |
| AATAATAACTATGATGGATA+TGG | 0.332294 | 3_4:-65545777 | Msa0514750:CDS |
| CTCAAGATGCATTGTTTCAA+TGG | 0.340392 | 3_4:+65546119 | None:intergenic |
| GGAGATACCTTCTCAATATA+AGG | 0.343251 | 3_4:-65543290 | Msa0514750:CDS |
| ATAGAGATTGCTTGTTCATA+AGG | 0.343775 | 3_4:+65544688 | None:intergenic |
| TCTAACTTATCATACTTTGA+TGG | 0.345408 | 3_4:+65542486 | None:intergenic |
| ACTGCTGCTCTTGCAAATGC+TGG | 0.348605 | 3_4:-65544904 | Msa0514750:CDS |
| AAGCTCTTTACATGATAATA+AGG | 0.349419 | 3_4:-65542964 | Msa0514750:intron |
| AACAAGCAATCTCTATTATT+GGG | 0.350518 | 3_4:-65544681 | Msa0514750:CDS |
| TGATGCTGAGGTGTTTGATA+TGG | 0.351672 | 3_4:+65545720 | None:intergenic |
| TATTCTGAAGGAGATTGTTA+TGG | 0.353222 | 3_4:-65545877 | Msa0514750:CDS |
| GTTCCTCAACTCAAACTTGC+AGG | 0.357893 | 3_4:-65544410 | Msa0514750:intron |
| TGCTGATAATTACCAATCAT+TGG | 0.361248 | 3_4:-65545622 | Msa0514750:CDS |
| AGTGATTGTGCTCCGGCAAA+TGG | 0.368528 | 3_4:+65542588 | None:intergenic |
| GTATCCATTGTCAATAGTTT+TGG | 0.373721 | 3_4:-65543564 | Msa0514750:CDS |
| ATTCTGAAGGAGATTGTTAT+GGG | 0.375661 | 3_4:-65545876 | Msa0514750:CDS |
| TCATGGCCATCTCAATAATA+GGG | 0.382764 | 3_4:+65544089 | None:intergenic |
| TACCTGCCCCTCTTTATAAT+AGG | 0.385177 | 3_4:-65543097 | Msa0514750:CDS |
| TATGGATTCTGCTGAGGATA+TGG | 0.389097 | 3_4:+65545738 | None:intergenic |
| TTCCATGTAGTTTCTGATTG+TGG | 0.389766 | 3_4:-65546711 | Msa0514750:CDS |
| TTCTTACCTCATCCAATGAT+TGG | 0.392097 | 3_4:+65545610 | None:intergenic |
| AGTTAGATAAGAGGTATTCC+AGG | 0.399559 | 3_4:-65545647 | Msa0514750:CDS |
| CTGTACATTGTCCGGATTGA+AGG | 0.401825 | 3_4:-65542380 | Msa0514750:three_prime_UTR |
| GTATTCTGTATCAATGCTTC+TGG | 0.404457 | 3_4:+65543712 | None:intergenic |
| GCTAGAAACTTGGACAGCTT+TGG | 0.412921 | 3_4:-65545925 | Msa0514750:CDS |
| GAATCTTCTAATCTCATTGT+TGG | 0.417569 | 3_4:-65544877 | Msa0514750:CDS |
| TCTTCTGTTCCTGTGGACTT+AGG | 0.419888 | 3_4:+65543684 | None:intergenic |
| GAAAGAAGAGTGCTTGTAGA+AGG | 0.421808 | 3_4:+65546153 | None:intergenic |
| TAGGAGTTGGAGATGGGCCG+TGG | 0.422949 | 3_4:-65543541 | Msa0514750:CDS |
| GTTTGCCCTTGATGCTTTGA+TGG | 0.428071 | 3_4:-65543311 | Msa0514750:CDS |
| GGCCTTCGGCTGTGGACATC+AGG | 0.428783 | 3_4:-65542754 | Msa0514750:intron |
| TGCTCTTGCAAATGCTGGGC+TGG | 0.440966 | 3_4:-65544899 | Msa0514750:CDS |
| TAGAGATTGCTTGTTCATAA+GGG | 0.442178 | 3_4:+65544689 | None:intergenic |
| CAAGTTATCTTCATCAAAAG+TGG | 0.442539 | 3_4:+65544648 | None:intergenic |
| CAGTCCTCCTGTACATTGTC+CGG | 0.443259 | 3_4:-65542388 | Msa0514750:three_prime_UTR |
| CACATATATACAACAATGTA+AGG | 0.450605 | 3_4:+65542413 | None:intergenic |
| ATGGGAGGGAATAGTTCAAA+AGG | 0.451325 | 3_4:-65545858 | Msa0514750:CDS |
| CTGTCTCTGTACAAATTGTC+AGG | 0.456889 | 3_4:-65542338 | Msa0514750:three_prime_UTR |
| TCATGTAAAGAGCTTGTAGA+TGG | 0.457088 | 3_4:+65542972 | None:intergenic |
| TGGAATTGCAGCTAGAAACT+TGG | 0.461616 | 3_4:-65545935 | Msa0514750:intron |
| AAGGATATGGCCTTCGGCTG+TGG | 0.465607 | 3_4:-65542762 | Msa0514750:CDS |
| TCATGGAATAATAACTATGA+TGG | 0.467927 | 3_4:-65545783 | Msa0514750:CDS |
| GGAGGGGACATTCGCCGGAT+AGG | 0.471093 | 3_4:-65543127 | Msa0514750:CDS |
| GCAGGTAGAGGAACCCTATC+CGG | 0.472052 | 3_4:+65543113 | None:intergenic |
| TATTCATAGCCGGTATCTCT+AGG | 0.474025 | 3_4:+65543017 | None:intergenic |
| TCGCATCGGTAAGACAAATA+GGG | 0.477708 | 3_4:+65542784 | None:intergenic |
| GTTCGCCCCTATTATTGAGA+TGG | 0.480004 | 3_4:-65544095 | Msa0514750:CDS |
| ATTAAAATTTCATTGAAAGC+AGG | 0.481396 | 3_4:+65542530 | None:intergenic |
| CTGCTGCTCTTGCAAATGCT+GGG | 0.481701 | 3_4:-65544903 | Msa0514750:CDS |
| GCTAATAATTGCAGATGGAC+AGG | 0.482092 | 3_4:-65544029 | Msa0514750:intron |
| GAGGCATGTTCCTTCATATG+AGG | 0.482360 | 3_4:-65545823 | Msa0514750:CDS |
| TTGGTAATTATCAGCAATCC+TGG | 0.483837 | 3_4:+65545629 | None:intergenic |
| GTCCTATTATAAAGAGGGGC+AGG | 0.485754 | 3_4:+65543095 | None:intergenic |
| GTGATTGTGCTCCGGCAAAT+GGG | 0.486903 | 3_4:+65542589 | None:intergenic |
| GAACCTGAAGCCTCATATGA+AGG | 0.490085 | 3_4:+65545813 | None:intergenic |
| TGCACGGAGGGGACATTCGC+CGG | 0.506356 | 3_4:-65543132 | Msa0514750:CDS |
| GAGGGGACATTCGCCGGATA+GGG | 0.506490 | 3_4:-65543126 | Msa0514750:CDS |
| CAGAGTGTCCCTAGAGATAC+CGG | 0.508438 | 3_4:-65543026 | Msa0514750:CDS |
| ATAGTTCAAAAGGGTCTCCT+AGG | 0.509315 | 3_4:-65545848 | Msa0514750:CDS |
| GAAGGAACATGCCTCCTCCT+AGG | 0.510275 | 3_4:+65545831 | None:intergenic |
| TTATAAAGAGGGGCAGGTAG+AGG | 0.516187 | 3_4:+65543101 | None:intergenic |
| TGAAGGAGATTGTTATGGGA+GGG | 0.521525 | 3_4:-65545872 | Msa0514750:CDS |
| AACTCCGTCTCTCTTCGACT+TGG | 0.522154 | 3_4:+65543331 | None:intergenic |
| TATAAGGCAACCATAGAACT+TGG | 0.523288 | 3_4:-65543274 | Msa0514750:CDS |
| GATGCGAAGGATATGGCCTT+CGG | 0.523527 | 3_4:-65542768 | Msa0514750:CDS |
| CATTGAAACAATGCATCTTG+AGG | 0.525107 | 3_4:-65546118 | Msa0514750:intron |
| ATAATAGGGGCGAACGAAGT+CGG | 0.525409 | 3_4:+65544103 | None:intergenic |
| CTTCAATCCGGACAATGTAC+AGG | 0.526742 | 3_4:+65542381 | None:intergenic |
| AAGAAGTCCTATTATAAAGA+GGG | 0.527574 | 3_4:+65543090 | None:intergenic |
| TGGCAGACTTGTTGTGGATG+TGG | 0.528940 | 3_4:-65542631 | Msa0514750:intron |
| GAAGAAGTCCTATTATAAAG+AGG | 0.532320 | 3_4:+65543089 | None:intergenic |
| TCTTAGTAGTGATTGTGCTC+CGG | 0.533999 | 3_4:+65542581 | None:intergenic |
| TTTATTGTCTTCTGTTCCTG+TGG | 0.536657 | 3_4:+65543677 | None:intergenic |
| AGAAGCATTGATACAGAATA+CGG | 0.538171 | 3_4:-65543710 | Msa0514750:CDS |
| ATAACATGATGCCTTCAATC+CGG | 0.538865 | 3_4:+65542369 | None:intergenic |
| TGATATGAGTAGTGCACGGA+GGG | 0.542228 | 3_4:-65543144 | Msa0514750:intron |
| AGTTTACATCACATTGGAAG+TGG | 0.542890 | 3_4:-65544718 | Msa0514750:CDS |
| TGCTGAGGATATGGTGATTG+TGG | 0.545785 | 3_4:+65545747 | None:intergenic |
| ATGGTTGCCTTATATTGAGA+AGG | 0.548809 | 3_4:+65543283 | None:intergenic |
| AATTGTCAAACGCACGAGAA+GGG | 0.560209 | 3_4:+65543489 | None:intergenic |
| CCATCTCCAAATCCAAAACA+TGG | 0.561260 | 3_4:+65544622 | None:intergenic |
| CCATAGAACTTGGCTTATTG+GGG | 0.563316 | 3_4:-65543264 | Msa0514750:intron |
| CGGACAATGTACAGGAGGAC+TGG | 0.567172 | 3_4:+65542389 | None:intergenic |
| TAAATGCGATCGTAAAAGCC+AGG | 0.572844 | 3_4:-65543658 | Msa0514750:intron |
| GTCTTGCTAATAATTGCAGA+TGG | 0.575821 | 3_4:-65544034 | Msa0514750:CDS |
| TTCTGATTGTGGGCGTAACG+TGG | 0.577994 | 3_4:-65546700 | Msa0514750:CDS |
| TTAGCTTCTATTCAGAAGAG+AGG | 0.578942 | 3_4:-65544478 | Msa0514750:CDS |
| TAATTACCAATCATTGGATG+AGG | 0.579043 | 3_4:-65545616 | Msa0514750:intron |
| GGCAAATGGGACAGAACTGA+AGG | 0.579057 | 3_4:+65542602 | None:intergenic |
| ACAAAGAGTAATGAGTGGAC+AGG | 0.580423 | 3_4:-65544844 | Msa0514750:intron |
| TGGGCCGTGGGAGATGATGA+AGG | 0.581679 | 3_4:-65543528 | Msa0514750:CDS |
| CCTACCAAAACTATTGACAA+TGG | 0.582923 | 3_4:+65543560 | None:intergenic |
| ATTCATAGCCGGTATCTCTA+GGG | 0.583202 | 3_4:+65543018 | None:intergenic |
| GTATCTCCATCAAAGCATCA+AGG | 0.586069 | 3_4:+65543305 | None:intergenic |
| CAAAAGGGTCTCCTAGGAGG+AGG | 0.587835 | 3_4:-65545842 | Msa0514750:CDS |
| AGGACTTCTTCAAGCATCAG+TGG | 0.590302 | 3_4:-65543077 | Msa0514750:CDS |
| AAATTGTCAAACGCACGAGA+AGG | 0.592611 | 3_4:+65543488 | None:intergenic |
| ATGACATGGCAGACTTGTTG+TGG | 0.600617 | 3_4:-65542637 | Msa0514750:intron |
| GCCCACAATCAGAAACTACA+TGG | 0.602204 | 3_4:+65546709 | None:intergenic |
| TATTTGTCTTACCGATGCGA+AGG | 0.603354 | 3_4:-65542781 | Msa0514750:CDS |
| CTGAAGGAGATTGTTATGGG+AGG | 0.603550 | 3_4:-65545873 | Msa0514750:CDS |
| AGGAGTTGGAGATGGGCCGT+GGG | 0.606259 | 3_4:-65543540 | Msa0514750:CDS |
| TGGGAGGGAATAGTTCAAAA+GGG | 0.609344 | 3_4:-65545857 | Msa0514750:CDS |
| ACTTTGTTCAACAATAGTCA+TGG | 0.613116 | 3_4:+65544072 | None:intergenic |
| TATCTCCATCAAAGCATCAA+GGG | 0.616209 | 3_4:+65543306 | None:intergenic |
| ACTGCGTTCATATTCATAGC+CGG | 0.621442 | 3_4:+65543007 | None:intergenic |
| ACTATTGTTGAACAAAGTGC+TGG | 0.622535 | 3_4:-65544067 | Msa0514750:CDS |
| TACCTGATGTCCACAGCCGA+AGG | 0.622550 | 3_4:+65542752 | None:intergenic |
| AATTCCTTCATCATCTCCCA+CGG | 0.625144 | 3_4:+65543524 | None:intergenic |
| CATGGCCATCTCAATAATAG+GGG | 0.627990 | 3_4:+65544090 | None:intergenic |
| AAATCCAAGTCGAAGAGAGA+CGG | 0.629464 | 3_4:-65543335 | Msa0514750:CDS |
| TCAGAAGAGAGGTTATGCAA+TGG | 0.630962 | 3_4:-65544467 | Msa0514750:CDS |
| ATACGGCAACCTAAGTCCAC+AGG | 0.633516 | 3_4:-65543693 | Msa0514750:CDS |
| GTTCAAAAGGGTCTCCTAGG+AGG | 0.635405 | 3_4:-65545845 | Msa0514750:CDS |
| ATTTCACAAAGAGTAATGAG+TGG | 0.655353 | 3_4:-65544849 | Msa0514750:CDS |
| GAAGGCCATATCCTTCGCAT+CGG | 0.662839 | 3_4:+65542770 | None:intergenic |
| TAAGTTAGAACATCAGAGTG+AGG | 0.668701 | 3_4:-65542472 | Msa0514750:three_prime_UTR |
| GTTTGATATGGATTCTGCTG+AGG | 0.671485 | 3_4:+65545732 | None:intergenic |
| AGAAGTCCTATTATAAAGAG+GGG | 0.671558 | 3_4:+65543091 | None:intergenic |
| ACACCTGCAAGTTTGAGTTG+AGG | 0.674035 | 3_4:+65544407 | None:intergenic |
| GCAGATGAAAACTGATGCTG+AGG | 0.680129 | 3_4:+65545708 | None:intergenic |
| CAATCCGGACAATGTACAGG+AGG | 0.683927 | 3_4:+65542384 | None:intergenic |
| TGAGGATATGGTGATTGTGG+TGG | 0.686769 | 3_4:+65545750 | None:intergenic |
| GATATGAGTAGTGCACGGAG+GGG | 0.694298 | 3_4:-65543143 | Msa0514750:intron |
| TTGATATGAGTAGTGCACGG+AGG | 0.715455 | 3_4:-65543145 | Msa0514750:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTTTTGTTTTTAATT+AGG | - | chr3_4:65544763-65544782 | Msa0514750:intron | 10.0% |
| !! | TCAAAGTAAAATAATTGAAA+AGG | + | chr3_4:65542920-65542939 | None:intergenic | 15.0% |
| !!! | AGTCTATTTTTTTTTTTTTG+TGG | - | chr3_4:65543430-65543449 | Msa0514750:intron | 15.0% |
| !!! | GTCTATTTTTTTTTTTTTGT+GGG | - | chr3_4:65543431-65543450 | Msa0514750:intron | 15.0% |
| !!! | TCTATTTTTTTTTTTTTGTG+GGG | - | chr3_4:65543432-65543451 | Msa0514750:intron | 15.0% |
| !!! | ATAATATAAGATTCTAAAGT+AGG | - | chr3_4:65543734-65543753 | Msa0514750:intron | 15.0% |
| !! | TAAATAAGTACTTAATTAAG+TGG | + | chr3_4:65543772-65543791 | None:intergenic | 15.0% |
| !! | ATATCTTATCTTATTAGTTA+CGG | - | chr3_4:65545062-65545081 | Msa0514750:intron | 15.0% |
| !! | TAATAACTTATAACTGAATT+TGG | - | chr3_4:65545738-65545757 | Msa0514750:CDS | 15.0% |
| !!! | TCAATGAAATTTTAATTCAT+TGG | - | chr3_4:65546399-65546418 | Msa0514750:intron | 15.0% |
| !! | TAACTTAAACAGAAAGTTAT+GGG | + | chr3_4:65542480-65542499 | None:intergenic | 20.0% |
| !! | TTAACTTAAACAGAAAGTTA+TGG | + | chr3_4:65542481-65542500 | None:intergenic | 20.0% |
| !! | ATAATTGAAAAGGACAAAAA+AGG | + | chr3_4:65542910-65542929 | None:intergenic | 20.0% |
| !! | GAATTGATGTTTATATAACT+TGG | + | chr3_4:65542951-65542970 | None:intergenic | 20.0% |
| !!! | TTTACTTTGTTTTATTCTGA+AGG | - | chr3_4:65543033-65543052 | Msa0514750:CDS | 20.0% |
| !!! | AATAATAACTATGATGGATA+TGG | - | chr3_4:65543145-65543164 | Msa0514750:intron | 20.0% |
| !! | TAATGACAAACAAAATCAAA+GGG | + | chr3_4:65543405-65543424 | None:intergenic | 20.0% |
| !! | ATAATGACAAACAAAATCAA+AGG | + | chr3_4:65543406-65543425 | None:intergenic | 20.0% |
| !! | ATTATAAAAACAGTATCCTT+TGG | + | chr3_4:65543469-65543488 | None:intergenic | 20.0% |
| !!! | TTTAGATTTTAGAGTCAAAA+GGG | - | chr3_4:65543545-65543564 | Msa0514750:CDS | 20.0% |
| !!! | TACCCAATTATTGATTATAT+TGG | + | chr3_4:65543607-65543626 | None:intergenic | 20.0% |
| !! | ATAATCAATAATTGGGTATA+AGG | - | chr3_4:65543609-65543628 | Msa0514750:intron | 20.0% |
| !! | TAATCAATAATTGGGTATAA+GGG | - | chr3_4:65543610-65543629 | Msa0514750:intron | 20.0% |
| !!! | TCAACCAAAATTAATTGTTT+TGG | - | chr3_4:65543934-65543953 | Msa0514750:intron | 20.0% |
| !!! | AGTTCCAAAACAATTAATTT+TGG | + | chr3_4:65543941-65543960 | None:intergenic | 20.0% |
| !! | TGAAAAAAACAAAACTACAT+TGG | + | chr3_4:65544356-65544375 | None:intergenic | 20.0% |
| !!! | ACTTGTTATCTTAGATATTT+TGG | - | chr3_4:65544553-65544572 | Msa0514750:intron | 20.0% |
| !!! | AAAAATCAATCTAAGATAAC+AGG | + | chr3_4:65544753-65544772 | None:intergenic | 20.0% |
| !! | AAAACTAAAAAAAACTTACC+TGG | + | chr3_4:65545285-65545304 | None:intergenic | 20.0% |
| !! | GAAGATTTATCGTTTATATA+TGG | + | chr3_4:65545484-65545503 | None:intergenic | 20.0% |
| !!! | TACTTAAAATTTGTTAGACA+GGG | - | chr3_4:65545703-65545722 | Msa0514750:CDS | 20.0% |
| !! | ATTAAAATTTCATTGAAAGC+AGG | + | chr3_4:65546395-65546414 | None:intergenic | 20.0% |
| !! | TCCATTGTTGATAAATATCA+CGG | - | chr3_4:65542504-65542523 | Msa0514750:three_prime_UTR | 25.0% |
| ! | CATTAACTAAAGACAGATTA+TGG | - | chr3_4:65542649-65542668 | Msa0514750:intron | 25.0% |
| !! | AAAATGAAACTTGTTTGAAC+TGG | - | chr3_4:65542697-65542716 | Msa0514750:intron | 25.0% |
| ! | AAATTTCCTTCTCCAATTAA+TGG | - | chr3_4:65542870-65542889 | Msa0514750:intron | 25.0% |
| ! | GCAAATATTCAACCATTAAT+TGG | + | chr3_4:65542885-65542904 | None:intergenic | 25.0% |
| ! | ATTCATTCATGTCTTTGTTA+TGG | - | chr3_4:65542967-65542986 | Msa0514750:CDS | 25.0% |
| ! | TCATGGAATAATAACTATGA+TGG | - | chr3_4:65543139-65543158 | Msa0514750:intron | 25.0% |
| !!! | CTCTTATCTAACTTCTTTTT+TGG | + | chr3_4:65543268-65543287 | None:intergenic | 25.0% |
| ! | CAAAAAAGAAGTTAGATAAG+AGG | - | chr3_4:65543266-65543285 | Msa0514750:CDS | 25.0% |
| ! | TTGAACAAGAATTAAACTCT+GGG | - | chr3_4:65543493-65543512 | Msa0514750:CDS | 25.0% |
| !!! | GTTTAGATTTTAGAGTCAAA+AGG | - | chr3_4:65543544-65543563 | Msa0514750:CDS | 25.0% |
| !!! | TTAGATTTTAGAGTCAAAAG+GGG | - | chr3_4:65543546-65543565 | Msa0514750:CDS | 25.0% |
| ! | AAAATAGAAACTGAGATAAC+TGG | - | chr3_4:65543573-65543592 | Msa0514750:intron | 25.0% |
| ! | GGCCAATATAATCAATAATT+GGG | - | chr3_4:65543602-65543621 | Msa0514750:intron | 25.0% |
| ! | TAATCGTCAAAATGAAAATG+AGG | - | chr3_4:65543835-65543854 | Msa0514750:intron | 25.0% |
| ! | GAAATAAACAGCTTATACAA+AGG | + | chr3_4:65543875-65543894 | None:intergenic | 25.0% |
| !! | AATAATGTGTATTTTCTCTC+TGG | + | chr3_4:65543964-65543983 | None:intergenic | 25.0% |
| ! | AACAAGCAATCTCTATTATT+GGG | - | chr3_4:65544241-65544260 | Msa0514750:intron | 25.0% |
| ! | GATAACAAGTGAATGAATAA+AGG | + | chr3_4:65544543-65544562 | None:intergenic | 25.0% |
| ! | TAATCCATATTTCACACTAT+AGG | - | chr3_4:65544924-65544943 | Msa0514750:intron | 25.0% |
| !!! | GTACTTAAAATTTGTTAGAC+AGG | - | chr3_4:65545702-65545721 | Msa0514750:CDS | 25.0% |
| ! | AAGAAGTCCTATTATAAAGA+GGG | + | chr3_4:65545835-65545854 | None:intergenic | 25.0% |
| ! | AAGCTCTTTACATGATAATA+AGG | - | chr3_4:65545958-65545977 | Msa0514750:intron | 25.0% |
| ! | TCTAACTTATCATACTTTGA+TGG | + | chr3_4:65546439-65546458 | None:intergenic | 25.0% |
| ! | CACATATATACAACAATGTA+AGG | + | chr3_4:65546512-65546531 | None:intergenic | 25.0% |
| !!! | TCAATGAACACTTTTTTTGT+TGG | - | chr3_4:65546613-65546632 | Msa0514750:intron | 25.0% |
| !!! | CAATTATTTTTTTCAGACGA+AGG | + | chr3_4:65546693-65546712 | None:intergenic | 25.0% |
| AAAATTGCACCGTATTTACT+AGG | - | chr3_4:65542270-65542289 | Msa0514750:three_prime_UTR | 30.0% | |
| ATCATATCACAAAGTTGACA+CGG | + | chr3_4:65542385-65542404 | None:intergenic | 30.0% | |
| AGTTATGGGCATATTTCATA+TGG | + | chr3_4:65542466-65542485 | None:intergenic | 30.0% | |
| ACCGTGATATTTATCAACAA+TGG | + | chr3_4:65542508-65542527 | None:intergenic | 30.0% | |
| AATTGGAGAAGGAAATTTCT+TGG | + | chr3_4:65542868-65542887 | None:intergenic | 30.0% | |
| ATTCAACCATTAATTGGAGA+AGG | + | chr3_4:65542879-65542898 | None:intergenic | 30.0% | |
| ATGTTTATATAACTTGGCTG+AGG | + | chr3_4:65542945-65542964 | None:intergenic | 30.0% | |
| ! | TATTCTGAAGGAGATTGTTA+TGG | - | chr3_4:65543045-65543064 | Msa0514750:CDS | 30.0% |
| ! | ATTCTGAAGGAGATTGTTAT+GGG | - | chr3_4:65543046-65543065 | Msa0514750:CDS | 30.0% |
| TGCTGATAATTACCAATCAT+TGG | - | chr3_4:65543300-65543319 | Msa0514750:CDS | 30.0% | |
| TAATTACCAATCATTGGATG+AGG | - | chr3_4:65543306-65543325 | Msa0514750:CDS | 30.0% | |
| !!! | TTTTTTTTGTGGGGTTAGAA+TGG | - | chr3_4:65543441-65543460 | Msa0514750:intron | 30.0% |
| !!! | TTTTTTTGTGGGGTTAGAAT+GGG | - | chr3_4:65543442-65543461 | Msa0514750:intron | 30.0% |
| CTTGAACAAGAATTAAACTC+TGG | - | chr3_4:65543492-65543511 | Msa0514750:CDS | 30.0% | |
| TGAACAAGAATTAAACTCTG+GGG | - | chr3_4:65543494-65543513 | Msa0514750:CDS | 30.0% | |
| !!! | TAGATTTTAGAGTCAAAAGG+GGG | - | chr3_4:65543547-65543566 | Msa0514750:CDS | 30.0% |
| GGGCCAATATAATCAATAAT+TGG | - | chr3_4:65543601-65543620 | Msa0514750:intron | 30.0% | |
| ! | GACTTTCTGAATTTTATGTC+TGG | - | chr3_4:65543634-65543653 | Msa0514750:intron | 30.0% |
| !! | AAGATTCTAAAGTAGGAGTT+CGG | - | chr3_4:65543741-65543760 | Msa0514750:intron | 30.0% |
| GAATCTTCTAATCTCATTGT+TGG | - | chr3_4:65544045-65544064 | Msa0514750:CDS | 30.0% | |
| ATTTCACAAAGAGTAATGAG+TGG | - | chr3_4:65544073-65544092 | Msa0514750:CDS | 30.0% | |
| AGTATATACTTCACTTTCTC+AGG | - | chr3_4:65544159-65544178 | Msa0514750:intron | 30.0% | |
| GTATATACTTCACTTTCTCA+GGG | - | chr3_4:65544160-65544179 | Msa0514750:intron | 30.0% | |
| CGAAAAAGTTTACATCACAT+TGG | - | chr3_4:65544198-65544217 | Msa0514750:intron | 30.0% | |
| TAGAGATTGCTTGTTCATAA+GGG | + | chr3_4:65544236-65544255 | None:intergenic | 30.0% | |
| ATAGAGATTGCTTGTTCATA+AGG | + | chr3_4:65544237-65544256 | None:intergenic | 30.0% | |
| GAACAAGCAATCTCTATTAT+TGG | - | chr3_4:65544240-65544259 | Msa0514750:intron | 30.0% | |
| CAAGTTATCTTCATCAAAAG+TGG | + | chr3_4:65544277-65544296 | None:intergenic | 30.0% | |
| ! | GATAACTTGATTCCATGTTT+TGG | - | chr3_4:65544288-65544307 | Msa0514750:intron | 30.0% |
| !! | TTGATTCCATGTTTTGGATT+TGG | - | chr3_4:65544294-65544313 | Msa0514750:intron | 30.0% |
| !!! | ATATTTTGGTCTTAACCCTT+CGG | - | chr3_4:65544567-65544586 | Msa0514750:intron | 30.0% |
| CAATTAAGATCGAATCATTC+AGG | + | chr3_4:65544687-65544706 | None:intergenic | 30.0% | |
| CTGAATGATTCGATCTTAAT+TGG | - | chr3_4:65544685-65544704 | Msa0514750:CDS | 30.0% | |
| ! | ACTTGTTGCATTCATAAAAC+AGG | - | chr3_4:65544795-65544814 | Msa0514750:intron | 30.0% |
| ACTTTGTTCAACAATAGTCA+TGG | + | chr3_4:65544853-65544872 | None:intergenic | 30.0% | |
| TGTACCTATAGTGTGAAATA+TGG | + | chr3_4:65544931-65544950 | None:intergenic | 30.0% | |
| AAATGAATTAACTGCAATGC+TGG | - | chr3_4:65544998-65545017 | Msa0514750:intron | 30.0% | |
| GCTTGATGAATGAAATTAGT+CGG | - | chr3_4:65545115-65545134 | Msa0514750:intron | 30.0% | |
| !! | AGAAGCATTGATACAGAATA+CGG | - | chr3_4:65545212-65545231 | Msa0514750:intron | 30.0% |
| ! | AAGAGTATAAGAATGCAGAA+TGG | + | chr3_4:65545322-65545341 | None:intergenic | 30.0% |
| ! | GTATCCATTGTCAATAGTTT+TGG | - | chr3_4:65545358-65545377 | Msa0514750:intron | 30.0% |
| !!! | GTTTGACAATTTTCAGGTTT+GGG | - | chr3_4:65545445-65545464 | Msa0514750:intron | 30.0% |
| ! | AAATGTGATAATGTTGTCTG+TGG | - | chr3_4:65545515-65545534 | Msa0514750:intron | 30.0% |
| AGAAGTCCTATTATAAAGAG+GGG | + | chr3_4:65545834-65545853 | None:intergenic | 30.0% | |
| GAAGAAGTCCTATTATAAAG+AGG | + | chr3_4:65545836-65545855 | None:intergenic | 30.0% | |
| ! | GAGATAGAAATGATGATGAA+TGG | + | chr3_4:65546067-65546086 | None:intergenic | 30.0% |
| CTCACTTTGAATAGTAATAG+TGG | - | chr3_4:65546084-65546103 | Msa0514750:intron | 30.0% | |
| GTCGTTCTTTCTATTAAGTA+TGG | - | chr3_4:65546648-65546667 | Msa0514750:intron | 30.0% | |
| TTCCATGTAGTTTCTGATTG+TGG | - | chr3_4:65542211-65542230 | Msa0514750:three_prime_UTR | 35.0% | |
| TCCATGTAGTTTCTGATTGT+GGG | - | chr3_4:65542212-65542231 | Msa0514750:three_prime_UTR | 35.0% | |
| TAAATCTTCAGCGAAGTTGA+TGG | - | chr3_4:65542527-65542546 | Msa0514750:three_prime_UTR | 35.0% | |
| CTCAAGATGCATTGTTTCAA+TGG | + | chr3_4:65542806-65542825 | None:intergenic | 35.0% | |
| CATTGAAACAATGCATCTTG+AGG | - | chr3_4:65542804-65542823 | Msa0514750:intron | 35.0% | |
| GGCTGTGAATTCTCATAAAA+TGG | + | chr3_4:65543247-65543266 | None:intergenic | 35.0% | |
| !! | AGTTAGATAAGAGGTATTCC+AGG | - | chr3_4:65543275-65543294 | Msa0514750:CDS | 35.0% |
| ! | TTGGTAATTATCAGCAATCC+TGG | + | chr3_4:65543296-65543315 | None:intergenic | 35.0% |
| TTCTTACCTCATCCAATGAT+TGG | + | chr3_4:65543315-65543334 | None:intergenic | 35.0% | |
| AGAAACTGAGATAACTGGAA+AGG | - | chr3_4:65543578-65543597 | Msa0514750:intron | 35.0% | |
| GAAACTGAGATAACTGGAAA+GGG | - | chr3_4:65543579-65543598 | Msa0514750:intron | 35.0% | |
| AAACTGAGATAACTGGAAAG+GGG | - | chr3_4:65543580-65543599 | Msa0514750:intron | 35.0% | |
| TAATGAAGTGAATCGAACAC+AGG | - | chr3_4:65543993-65544012 | Msa0514750:intron | 35.0% | |
| AGTTTACATCACATTGGAAG+TGG | - | chr3_4:65544204-65544223 | Msa0514750:intron | 35.0% | |
| TTAGCTTCTATTCAGAAGAG+AGG | - | chr3_4:65544444-65544463 | Msa0514750:CDS | 35.0% | |
| !!! | CAATGGTTTTGAGGAAGTAT+TGG | - | chr3_4:65544472-65544491 | Msa0514750:CDS | 35.0% |
| GAGGTAAGAAAAGTTTGGTA+AGG | - | chr3_4:65544630-65544649 | Msa0514750:CDS | 35.0% | |
| TCATTAGTCACTTGAACACT+TGG | - | chr3_4:65544711-65544730 | Msa0514750:CDS | 35.0% | |
| TCATGGCCATCTCAATAATA+GGG | + | chr3_4:65544836-65544855 | None:intergenic | 35.0% | |
| ACTATTGTTGAACAAAGTGC+TGG | - | chr3_4:65544855-65544874 | Msa0514750:CDS | 35.0% | |
| GTCTTGCTAATAATTGCAGA+TGG | - | chr3_4:65544888-65544907 | Msa0514750:CDS | 35.0% | |
| !! | ATTGTTTCTGCTCAGTGATA+GGG | - | chr3_4:65545150-65545169 | Msa0514750:intron | 35.0% |
| GTATTCTGTATCAATGCTTC+TGG | + | chr3_4:65545213-65545232 | None:intergenic | 35.0% | |
| TTTATTGTCTTCTGTTCCTG+TGG | + | chr3_4:65545248-65545267 | None:intergenic | 35.0% | |
| CCTACCAAAACTATTGACAA+TGG | + | chr3_4:65545365-65545384 | None:intergenic | 35.0% | |
| !!! | CCATTGTCAATAGTTTTGGT+AGG | - | chr3_4:65545362-65545381 | Msa0514750:intron | 35.0% |
| !!! | TCAATAGTTTTGGTAGGAGT+TGG | - | chr3_4:65545368-65545387 | Msa0514750:intron | 35.0% |
| !!! | CGTTTGACAATTTTCAGGTT+TGG | - | chr3_4:65545444-65545463 | Msa0514750:intron | 35.0% |
| ! | TATCTCCATCAAAGCATCAA+GGG | + | chr3_4:65545619-65545638 | None:intergenic | 35.0% |
| GGAGATACCTTCTCAATATA+AGG | - | chr3_4:65545632-65545651 | Msa0514750:CDS | 35.0% | |
| ATGGTTGCCTTATATTGAGA+AGG | + | chr3_4:65545642-65545661 | None:intergenic | 35.0% | |
| TATAAGGCAACCATAGAACT+TGG | - | chr3_4:65545648-65545667 | Msa0514750:CDS | 35.0% | |
| AACCATAGAACTTGGCTTAT+TGG | - | chr3_4:65545656-65545675 | Msa0514750:CDS | 35.0% | |
| ACCATAGAACTTGGCTTATT+GGG | - | chr3_4:65545657-65545676 | Msa0514750:CDS | 35.0% | |
| !! | TTGTTAGACAGGGTTTTATC+TGG | - | chr3_4:65545713-65545732 | Msa0514750:CDS | 35.0% |
| TCATTGATATGAGTAGTGCA+CGG | - | chr3_4:65545774-65545793 | Msa0514750:CDS | 35.0% | |
| ! | GCATCAGTGGAAATTCTTTT+CGG | - | chr3_4:65545858-65545877 | Msa0514750:CDS | 35.0% |
| TCATGTAAAGAGCTTGTAGA+TGG | + | chr3_4:65545953-65545972 | None:intergenic | 35.0% | |
| AAATCATGCTTTGCAATGTG+AGG | - | chr3_4:65545986-65546005 | Msa0514750:intron | 35.0% | |
| TTGTGATGACATTAAGGAAG+GGG | + | chr3_4:65546044-65546063 | None:intergenic | 35.0% | |
| GTTGTGATGACATTAAGGAA+GGG | + | chr3_4:65546045-65546064 | None:intergenic | 35.0% | |
| GAATGGTTGTGATGACATTA+AGG | + | chr3_4:65546050-65546069 | None:intergenic | 35.0% | |
| ATAGTGGTTTACCTATGACA+TGG | - | chr3_4:65546100-65546119 | Msa0514750:intron | 35.0% | |
| TAAGTTAGAACATCAGAGTG+AGG | - | chr3_4:65546450-65546469 | Msa0514750:intron | 35.0% | |
| ATAACATGATGCCTTCAATC+CGG | + | chr3_4:65546556-65546575 | None:intergenic | 35.0% | |
| ! | ACGGTGCAATTTTGTAACCT+AGG | + | chr3_4:65542263-65542282 | None:intergenic | 40.0% |
| CCGATGCTTCCTAGTAAATA+CGG | + | chr3_4:65542282-65542301 | None:intergenic | 40.0% | |
| ! | CCGTATTTACTAGGAAGCAT+CGG | - | chr3_4:65542279-65542298 | Msa0514750:three_prime_UTR | 40.0% |
| !! | ATTTACTAGGAAGCATCGGT+AGG | - | chr3_4:65542283-65542302 | Msa0514750:three_prime_UTR | 40.0% |
| !! | GAAAGAAGAGTGCTTGTAGA+AGG | + | chr3_4:65542772-65542791 | None:intergenic | 40.0% |
| TGGAATTGCAGCTAGAAACT+TGG | - | chr3_4:65542987-65543006 | Msa0514750:CDS | 40.0% | |
| TGAAGGAGATTGTTATGGGA+GGG | - | chr3_4:65543050-65543069 | Msa0514750:CDS | 40.0% | |
| ATGGGAGGGAATAGTTCAAA+AGG | - | chr3_4:65543064-65543083 | Msa0514750:CDS | 40.0% | |
| TGGGAGGGAATAGTTCAAAA+GGG | - | chr3_4:65543065-65543084 | Msa0514750:CDS | 40.0% | |
| ATAGTTCAAAAGGGTCTCCT+AGG | - | chr3_4:65543074-65543093 | Msa0514750:CDS | 40.0% | |
| ! | CTTCAGGTTCTTCATCTTCA+TGG | - | chr3_4:65543122-65543141 | Msa0514750:CDS | 40.0% |
| TATGGATTCTGCTGAGGATA+TGG | + | chr3_4:65543187-65543206 | None:intergenic | 40.0% | |
| GTTTGATATGGATTCTGCTG+AGG | + | chr3_4:65543193-65543212 | None:intergenic | 40.0% | |
| ! | TGATGCTGAGGTGTTTGATA+TGG | + | chr3_4:65543205-65543224 | None:intergenic | 40.0% |
| AACTGAGATAACTGGAAAGG+GGG | - | chr3_4:65543581-65543600 | Msa0514750:intron | 40.0% | |
| ! | TTTCTGCCACTTAAGCAATG+AGG | - | chr3_4:65543671-65543690 | Msa0514750:CDS | 40.0% |
| TCCATTCCTCATTGCTTAAG+TGG | + | chr3_4:65543680-65543699 | None:intergenic | 40.0% | |
| ACAAAGAGTAATGAGTGGAC+AGG | - | chr3_4:65544078-65544097 | Msa0514750:CDS | 40.0% | |
| CCATCTCCAAATCCAAAACA+TGG | + | chr3_4:65544303-65544322 | None:intergenic | 40.0% | |
| !! | CCATGTTTTGGATTTGGAGA+TGG | - | chr3_4:65544300-65544319 | Msa0514750:intron | 40.0% |
| GGATTTGGAGATGGTAACAT+TGG | - | chr3_4:65544309-65544328 | Msa0514750:intron | 40.0% | |
| TCAGAAGAGAGGTTATGCAA+TGG | - | chr3_4:65544455-65544474 | Msa0514750:CDS | 40.0% | |
| !! | GAGGTTATGCAATGGTTTTG+AGG | - | chr3_4:65544463-65544482 | Msa0514750:CDS | 40.0% |
| TTCCAGTCAAGATTCGAACT+CGG | - | chr3_4:65544656-65544675 | Msa0514750:CDS | 40.0% | |
| CATGGCCATCTCAATAATAG+GGG | + | chr3_4:65544835-65544854 | None:intergenic | 40.0% | |
| GTCATGGCCATCTCAATAAT+AGG | + | chr3_4:65544837-65544856 | None:intergenic | 40.0% | |
| GCTAATAATTGCAGATGGAC+AGG | - | chr3_4:65544893-65544912 | Msa0514750:CDS | 40.0% | |
| ! | ATCAAGCATTGCAGAATTGC+AGG | + | chr3_4:65545102-65545121 | None:intergenic | 40.0% |
| !! | CATTGTTTCTGCTCAGTGAT+AGG | - | chr3_4:65545149-65545168 | Msa0514750:intron | 40.0% |
| TAAATGCGATCGTAAAAGCC+AGG | - | chr3_4:65545264-65545283 | Msa0514750:intron | 40.0% | |
| ! | TTTTGGTAGGAGTTGGAGAT+GGG | - | chr3_4:65545375-65545394 | Msa0514750:intron | 40.0% |
| AATTCCTTCATCATCTCCCA+CGG | + | chr3_4:65545401-65545420 | None:intergenic | 40.0% | |
| AATTGTCAAACGCACGAGAA+GGG | + | chr3_4:65545436-65545455 | None:intergenic | 40.0% | |
| AAATTGTCAAACGCACGAGA+AGG | + | chr3_4:65545437-65545456 | None:intergenic | 40.0% | |
| ! | TCGTGCGTTTGACAATTTTC+AGG | - | chr3_4:65545439-65545458 | Msa0514750:intron | 40.0% |
| AAATCCAAGTCGAAGAGAGA+CGG | - | chr3_4:65545587-65545606 | Msa0514750:intron | 40.0% | |
| ! | GTATCTCCATCAAAGCATCA+AGG | + | chr3_4:65545620-65545639 | None:intergenic | 40.0% |
| CCATAGAACTTGGCTTATTG+GGG | - | chr3_4:65545658-65545677 | Msa0514750:CDS | 40.0% | |
| TACCTGCCCCTCTTTATAAT+AGG | - | chr3_4:65545825-65545844 | Msa0514750:CDS | 40.0% | |
| ATTCATAGCCGGTATCTCTA+GGG | + | chr3_4:65545907-65545926 | None:intergenic | 40.0% | |
| TATTCATAGCCGGTATCTCT+AGG | + | chr3_4:65545908-65545927 | None:intergenic | 40.0% | |
| ACTGCGTTCATATTCATAGC+CGG | + | chr3_4:65545918-65545937 | None:intergenic | 40.0% | |
| TGTGATGACATTAAGGAAGG+GGG | + | chr3_4:65546043-65546062 | None:intergenic | 40.0% | |
| GGTTGTGATGACATTAAGGA+AGG | + | chr3_4:65546046-65546065 | None:intergenic | 40.0% | |
| ! | TCGCATCGGTAAGACAAATA+GGG | + | chr3_4:65546141-65546160 | None:intergenic | 40.0% |
| ! | TTCGCATCGGTAAGACAAAT+AGG | + | chr3_4:65546142-65546161 | None:intergenic | 40.0% |
| TATTTGTCTTACCGATGCGA+AGG | - | chr3_4:65546141-65546160 | Msa0514750:CDS | 40.0% | |
| TGAGGAAATGCAAAGGAGAA+GGG | + | chr3_4:65546264-65546283 | None:intergenic | 40.0% | |
| TGTCATGTGAGGAAATGCAA+AGG | + | chr3_4:65546271-65546290 | None:intergenic | 40.0% | |
| TTGCATTTCCTCACATGACA+TGG | - | chr3_4:65546271-65546290 | Msa0514750:intron | 40.0% | |
| TCTTAGTAGTGATTGTGCTC+CGG | + | chr3_4:65546344-65546363 | None:intergenic | 40.0% | |
| CTGTCTCTGTACAAATTGTC+AGG | - | chr3_4:65546584-65546603 | Msa0514750:intron | 40.0% | |
| GCCCACAATCAGAAACTACA+TGG | + | chr3_4:65542216-65542235 | None:intergenic | 45.0% | |
| CCTAGCAAAGTCAAGTCAAC+TGG | + | chr3_4:65542747-65542766 | None:intergenic | 45.0% | |
| !! | CCAGTTGACTTGACTTTGCT+AGG | - | chr3_4:65542744-65542763 | Msa0514750:intron | 45.0% |
| GCTAGAAACTTGGACAGCTT+TGG | - | chr3_4:65542997-65543016 | Msa0514750:CDS | 45.0% | |
| CTGAAGGAGATTGTTATGGG+AGG | - | chr3_4:65543049-65543068 | Msa0514750:CDS | 45.0% | |
| GAGGCATGTTCCTTCATATG+AGG | - | chr3_4:65543099-65543118 | Msa0514750:CDS | 45.0% | |
| GTTCCTTCATATGAGGCTTC+AGG | - | chr3_4:65543106-65543125 | Msa0514750:CDS | 45.0% | |
| GAACCTGAAGCCTCATATGA+AGG | + | chr3_4:65543112-65543131 | None:intergenic | 45.0% | |
| TGAGGATATGGTGATTGTGG+TGG | + | chr3_4:65543175-65543194 | None:intergenic | 45.0% | |
| TGCTGAGGATATGGTGATTG+TGG | + | chr3_4:65543178-65543197 | None:intergenic | 45.0% | |
| GCAGATGAAAACTGATGCTG+AGG | + | chr3_4:65543217-65543236 | None:intergenic | 45.0% | |
| GCCACTTAAGCAATGAGGAA+TGG | - | chr3_4:65543676-65543695 | Msa0514750:CDS | 45.0% | |
| GTTCCTCAACTCAAACTTGC+AGG | - | chr3_4:65544512-65544531 | Msa0514750:intron | 45.0% | |
| !! | ACACCTGCAAGTTTGAGTTG+AGG | + | chr3_4:65544518-65544537 | None:intergenic | 45.0% |
| TCAACTCAAACTTGCAGGTG+TGG | - | chr3_4:65544517-65544536 | Msa0514750:intron | 45.0% | |
| !! | TAGAATTCTGGAGTTCGGCT+GGG | - | chr3_4:65544608-65544627 | Msa0514750:intron | 45.0% |
| GCTGGGAGGTAAGAAAAGTT+TGG | - | chr3_4:65544625-65544644 | Msa0514750:CDS | 45.0% | |
| TCCAGTCAAGATTCGAACTC+GGG | - | chr3_4:65544657-65544676 | Msa0514750:CDS | 45.0% | |
| ATAATAGGGGCGAACGAAGT+CGG | + | chr3_4:65544822-65544841 | None:intergenic | 45.0% | |
| GTTCGCCCCTATTATTGAGA+TGG | - | chr3_4:65544827-65544846 | Msa0514750:intron | 45.0% | |
| TGAACATGACTGTGCTTGCA+TGG | + | chr3_4:65545031-65545050 | None:intergenic | 45.0% | |
| TCTTCTGTTCCTGTGGACTT+AGG | + | chr3_4:65545241-65545260 | None:intergenic | 45.0% | |
| !! | GTTTTGGTAGGAGTTGGAGA+TGG | - | chr3_4:65545374-65545393 | Msa0514750:intron | 45.0% |
| ! | GTGATAATGTTGTCTGTGGC+TGG | - | chr3_4:65545519-65545538 | Msa0514750:intron | 45.0% |
| GTTTGCCCTTGATGCTTTGA+TGG | - | chr3_4:65545611-65545630 | Msa0514750:intron | 45.0% | |
| CCCCAATAAGCCAAGTTCTA+TGG | + | chr3_4:65545661-65545680 | None:intergenic | 45.0% | |
| TTGATATGAGTAGTGCACGG+AGG | - | chr3_4:65545777-65545796 | Msa0514750:CDS | 45.0% | |
| TGATATGAGTAGTGCACGGA+GGG | - | chr3_4:65545778-65545797 | Msa0514750:CDS | 45.0% | |
| TTATAAAGAGGGGCAGGTAG+AGG | + | chr3_4:65545824-65545843 | None:intergenic | 45.0% | |
| GTCCTATTATAAAGAGGGGC+AGG | + | chr3_4:65545830-65545849 | None:intergenic | 45.0% | |
| AGGACTTCTTCAAGCATCAG+TGG | - | chr3_4:65545845-65545864 | Msa0514750:CDS | 45.0% | |
| GTGATGACATTAAGGAAGGG+GGG | + | chr3_4:65546042-65546061 | None:intergenic | 45.0% | |
| TCTTACCGATGCGAAGGATA+TGG | - | chr3_4:65546147-65546166 | Msa0514750:CDS | 45.0% | |
| GTGAGGAAATGCAAAGGAGA+AGG | + | chr3_4:65546265-65546284 | None:intergenic | 45.0% | |
| !! | ATGACATGGCAGACTTGTTG+TGG | - | chr3_4:65546285-65546304 | Msa0514750:intron | 45.0% |
| TTCAGTTCTGTCCCATTTGC+CGG | - | chr3_4:65546322-65546341 | Msa0514750:intron | 45.0% | |
| CTTCAATCCGGACAATGTAC+AGG | + | chr3_4:65546544-65546563 | None:intergenic | 45.0% | |
| CTGTACATTGTCCGGATTGA+AGG | - | chr3_4:65546542-65546561 | Msa0514750:intron | 45.0% | |
| !! | ATATTAAGTTATAAATATTA+AGG | - | chr3_4:65546215-65546234 | Msa0514750:intron | 5.0% |
| !! | TATTAAGTTATAAATATTAA+GGG | - | chr3_4:65546216-65546235 | Msa0514750:intron | 5.0% |
| TTCTGATTGTGGGCGTAACG+TGG | - | chr3_4:65542222-65542241 | Msa0514750:three_prime_UTR | 50.0% | |
| GGCATTGTCAACTGTGACCT+AGG | - | chr3_4:65542243-65542262 | Msa0514750:three_prime_UTR | 50.0% | |
| GTTCAAAAGGGTCTCCTAGG+AGG | - | chr3_4:65543077-65543096 | Msa0514750:CDS | 50.0% | |
| TGGGGTTAGAATGGGACCAA+AGG | - | chr3_4:65543450-65543469 | Msa0514750:intron | 50.0% | |
| ACTGCTGCTCTTGCAAATGC+TGG | - | chr3_4:65544018-65544037 | Msa0514750:intron | 50.0% | |
| CTGCTGCTCTTGCAAATGCT+GGG | - | chr3_4:65544019-65544038 | Msa0514750:intron | 50.0% | |
| TCTTAACCCTTCGGTTCCCT+GGG | - | chr3_4:65544576-65544595 | Msa0514750:intron | 50.0% | |
| CCGAACTCCAGAATTCTAGG+CGG | + | chr3_4:65544606-65544625 | None:intergenic | 50.0% | |
| !! | CCGCCTAGAATTCTGGAGTT+CGG | - | chr3_4:65544603-65544622 | Msa0514750:intron | 50.0% |
| CAGCCGAACTCCAGAATTCT+AGG | + | chr3_4:65544609-65544628 | None:intergenic | 50.0% | |
| !! | CTAGAATTCTGGAGTTCGGC+TGG | - | chr3_4:65544607-65544626 | Msa0514750:intron | 50.0% |
| ACCCGAGTTCGAATCTTGAC+TGG | + | chr3_4:65544661-65544680 | None:intergenic | 50.0% | |
| TCAATGCTTCTGGTCACCTG+CGG | + | chr3_4:65545203-65545222 | None:intergenic | 50.0% | |
| ATACGGCAACCTAAGTCCAC+AGG | - | chr3_4:65545229-65545248 | Msa0514750:intron | 50.0% | |
| TAATGTTGTCTGTGGCTGGC+TGG | - | chr3_4:65545523-65545542 | Msa0514750:intron | 50.0% | |
| AACTCCGTCTCTCTTCGACT+TGG | + | chr3_4:65545594-65545613 | None:intergenic | 50.0% | |
| GATATGAGTAGTGCACGGAG+GGG | - | chr3_4:65545779-65545798 | Msa0514750:CDS | 50.0% | |
| ! | CAGAGTGTCCCTAGAGATAC+CGG | - | chr3_4:65545896-65545915 | Msa0514750:CDS | 50.0% |
| CCTGCAGTCAACCATGTCAT+AGG | + | chr3_4:65546114-65546133 | None:intergenic | 50.0% | |
| CCTATGACATGGTTGACTGC+AGG | - | chr3_4:65546111-65546130 | Msa0514750:intron | 50.0% | |
| GAAGGCCATATCCTTCGCAT+CGG | + | chr3_4:65546155-65546174 | None:intergenic | 50.0% | |
| GATGCGAAGGATATGGCCTT+CGG | - | chr3_4:65546154-65546173 | Msa0514750:CDS | 50.0% | |
| CAAGTCTGCCATGTCATGTG+AGG | + | chr3_4:65546282-65546301 | None:intergenic | 50.0% | |
| !! | TGGCAGACTTGTTGTGGATG+TGG | - | chr3_4:65546291-65546310 | Msa0514750:intron | 50.0% |
| GGCAAATGGGACAGAACTGA+AGG | + | chr3_4:65546323-65546342 | None:intergenic | 50.0% | |
| GTGATTGTGCTCCGGCAAAT+GGG | + | chr3_4:65546336-65546355 | None:intergenic | 50.0% | |
| AGTGATTGTGCTCCGGCAAA+TGG | + | chr3_4:65546337-65546356 | None:intergenic | 50.0% | |
| CAGTCCTCCTGTACATTGTC+CGG | - | chr3_4:65546534-65546553 | Msa0514750:intron | 50.0% | |
| CAATCCGGACAATGTACAGG+AGG | + | chr3_4:65546541-65546560 | None:intergenic | 50.0% | |
| CAAAAGGGTCTCCTAGGAGG+AGG | - | chr3_4:65543080-65543099 | Msa0514750:CDS | 55.0% | |
| GAAGGAACATGCCTCCTCCT+AGG | + | chr3_4:65543094-65543113 | None:intergenic | 55.0% | |
| TGCTCTTGCAAATGCTGGGC+TGG | - | chr3_4:65544023-65544042 | Msa0514750:intron | 55.0% | |
| GTCTTAACCCTTCGGTTCCC+TGG | - | chr3_4:65544575-65544594 | Msa0514750:intron | 55.0% | |
| AATTCTAGGCGGCCTTCCCA+GGG | + | chr3_4:65544595-65544614 | None:intergenic | 55.0% | |
| !! | AATTCTGGAGTTCGGCTGGG+AGG | - | chr3_4:65544611-65544630 | Msa0514750:intron | 55.0% |
| GCAGGTAGAGGAACCCTATC+CGG | + | chr3_4:65545812-65545831 | None:intergenic | 55.0% | |
| AAGGATATGGCCTTCGGCTG+TGG | - | chr3_4:65546160-65546179 | Msa0514750:intron | 55.0% | |
| TACCTGATGTCCACAGCCGA+AGG | + | chr3_4:65546173-65546192 | None:intergenic | 55.0% | |
| CGGACAATGTACAGGAGGAC+TGG | + | chr3_4:65546536-65546555 | None:intergenic | 55.0% | |
| AACCCTTCGGTTCCCTGGGA+AGG | - | chr3_4:65544580-65544599 | Msa0514750:intron | 60.0% | |
| GAATTCTAGGCGGCCTTCCC+AGG | + | chr3_4:65544596-65544615 | None:intergenic | 60.0% | |
| GGGAAGGCCGCCTAGAATTC+TGG | - | chr3_4:65544596-65544615 | Msa0514750:intron | 60.0% | |
| TTCTGGTCACCTGCGGCAAC+AGG | + | chr3_4:65545196-65545215 | None:intergenic | 60.0% | |
| TAGGAGTTGGAGATGGGCCG+TGG | - | chr3_4:65545381-65545400 | Msa0514750:intron | 60.0% | |
| AGGAGTTGGAGATGGGCCGT+GGG | - | chr3_4:65545382-65545401 | Msa0514750:intron | 60.0% | |
| TGGGCCGTGGGAGATGATGA+AGG | - | chr3_4:65545394-65545413 | Msa0514750:intron | 60.0% | |
| GAGGGGACATTCGCCGGATA+GGG | - | chr3_4:65545796-65545815 | Msa0514750:CDS | 60.0% | |
| GGCCTTCCCAGGGAACCGAA+GGG | + | chr3_4:65544585-65544604 | None:intergenic | 65.0% | |
| GATGCTCAGCCTGTTGCCGC+AGG | - | chr3_4:65545184-65545203 | Msa0514750:intron | 65.0% | |
| TGCACGGAGGGGACATTCGC+CGG | - | chr3_4:65545790-65545809 | Msa0514750:CDS | 65.0% | |
| GGAGGGGACATTCGCCGGAT+AGG | - | chr3_4:65545795-65545814 | Msa0514750:CDS | 65.0% | |
| GGCCTTCGGCTGTGGACATC+AGG | - | chr3_4:65546168-65546187 | Msa0514750:intron | 65.0% | |
| CGGCCTTCCCAGGGAACCGA+AGG | + | chr3_4:65544586-65544605 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 65542202 | 65546742 | 65542202 | ID=Msa0514750;Name=Msa0514750 |
| chr3_4 | mRNA | 65542202 | 65546742 | 65542202 | ID=Msa0514750-mRNA-1;Parent=Msa0514750;Name=Msa0514750-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.91|0.84|0.92|1|1|13|365|507 |
| chr3_4 | exon | 65542202 | 65542647 | 65542202 | ID=Msa0514750-mRNA-1:exon:16776;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65542755 | 65542811 | 65542755 | ID=Msa0514750-mRNA-1:exon:16775;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65542965 | 65543154 | 65542965 | ID=Msa0514750-mRNA-1:exon:16774;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65543265 | 65543392 | 65543265 | ID=Msa0514750-mRNA-1:exon:16773;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65543484 | 65543589 | 65543484 | ID=Msa0514750-mRNA-1:exon:16772;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65543659 | 65543738 | 65543659 | ID=Msa0514750-mRNA-1:exon:16771;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65544030 | 65544127 | 65544030 | ID=Msa0514750-mRNA-1:exon:16770;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65544411 | 65544524 | 65544411 | ID=Msa0514750-mRNA-1:exon:16769;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65544623 | 65544763 | 65544623 | ID=Msa0514750-mRNA-1:exon:16768;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65544845 | 65544929 | 65544845 | ID=Msa0514750-mRNA-1:exon:16767;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65545617 | 65545946 | 65545617 | ID=Msa0514750-mRNA-1:exon:16766;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65546119 | 65546178 | 65546119 | ID=Msa0514750-mRNA-1:exon:16765;Parent=Msa0514750-mRNA-1 |
| chr3_4 | exon | 65546689 | 65546742 | 65546689 | ID=Msa0514750-mRNA-1:exon:16764;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65546689 | 65546742 | 65546689 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65546119 | 65546178 | 65546119 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65545617 | 65545946 | 65545617 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65544845 | 65544929 | 65544845 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65544623 | 65544763 | 65544623 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65544411 | 65544524 | 65544411 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65544030 | 65544127 | 65544030 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65543659 | 65543738 | 65543659 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65543484 | 65543589 | 65543484 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65543265 | 65543392 | 65543265 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65542965 | 65543154 | 65542965 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65542755 | 65542811 | 65542755 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | CDS | 65542567 | 65542647 | 65542567 | ID=Msa0514750-mRNA-1:cds;Parent=Msa0514750-mRNA-1 |
| chr3_4 | three_prime_UTR | 65542202 | 65542566 | 65542202 | ID=Msa0514750-mRNA-1:three_prime_utr;Parent=Msa0514750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
