Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200900 | XP_003629164.1 | 89.183 | 416 | 0 | 2 | 1 | 416 | 1 | 371 | 0.0 | 737 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200900 | sp|Q8LFC0|IDH1_ARATH | 75.845 | 414 | 52 | 3 | 3 | 416 | 2 | 367 | 0.0 | 616 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200900 | G7L9H2 | 89.183 | 416 | 0 | 2 | 1 | 416 | 1 | 371 | 0.0 | 737 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015610 | Msa1200900 | -0.812658 | 3.795182e-51 | -8.615850e-47 |
| Msa0691900 | Msa1200900 | -0.806019 | 1.008075e-49 | -8.615850e-47 |
| Msa0184780 | Msa1200900 | -0.800372 | 1.486551e-48 | -8.615850e-47 |
| Msa0433640 | Msa1200900 | -0.805225 | 1.479447e-49 | -8.615850e-47 |
| Msa0477080 | Msa1200900 | -0.809783 | 1.595117e-50 | -8.615850e-47 |
| Msa1055680 | Msa1200900 | -0.808478 | 3.037116e-50 | -8.615850e-47 |
| Msa0309770 | Msa1200900 | -0.822053 | 2.910032e-53 | -8.615850e-47 |
| Msa0315440 | Msa1200900 | 0.801302 | 9.600191e-49 | -8.615850e-47 |
| Msa1200900 | Msa1255040 | 0.800286 | 1.547466e-48 | -8.615850e-47 |
| Msa0499410 | Msa1200900 | -0.815194 | 1.047530e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200900 | MtrunA17_Chr8g0370691 | 89.183 | 416 | 0 | 2 | 1 | 416 | 1 | 371 | 0.0 | 737 |
| Msa1200900 | MtrunA17_Chr5g0406691 | 79.327 | 416 | 37 | 3 | 1 | 416 | 1 | 367 | 0.0 | 650 |
| Msa1200900 | MtrunA17_Chr1g0181081 | 46.272 | 389 | 154 | 7 | 34 | 415 | 18 | 358 | 4.36e-108 | 322 |
| Msa1200900 | MtrunA17_Chr3g0133741 | 45.669 | 381 | 154 | 5 | 40 | 415 | 21 | 353 | 2.06e-107 | 320 |
| Msa1200900 | MtrunA17_Chr2g0333571 | 27.251 | 411 | 216 | 18 | 17 | 398 | 18 | 374 | 1.25e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1200900 | AT4G35260.1 | 75.845 | 414 | 52 | 3 | 3 | 416 | 2 | 367 | 0.0 | 616 |
| Msa1200900 | AT2G17130.1 | 73.913 | 414 | 60 | 3 | 3 | 416 | 2 | 367 | 0.0 | 600 |
| Msa1200900 | AT4G35650.1 | 72.397 | 413 | 67 | 3 | 4 | 416 | 3 | 368 | 0.0 | 597 |
| Msa1200900 | AT2G17130.2 | 72.947 | 414 | 60 | 3 | 3 | 416 | 2 | 363 | 0.0 | 592 |
| Msa1200900 | AT5G03290.1 | 44.619 | 381 | 158 | 4 | 40 | 415 | 42 | 374 | 1.38e-105 | 317 |
| Msa1200900 | AT3G09810.1 | 43.307 | 381 | 163 | 4 | 40 | 415 | 42 | 374 | 5.62e-100 | 303 |
| Msa1200900 | AT1G32480.1 | 56.627 | 249 | 69 | 5 | 41 | 287 | 2 | 213 | 2.90e-88 | 267 |
| Msa1200900 | AT1G80560.1 | 27.273 | 407 | 209 | 17 | 44 | 416 | 45 | 398 | 1.03e-25 | 108 |
| Msa1200900 | AT5G14200.1 | 26.702 | 382 | 203 | 14 | 44 | 398 | 49 | 380 | 1.21e-24 | 105 |
| Msa1200900 | AT5G14200.3 | 26.702 | 382 | 203 | 14 | 44 | 398 | 49 | 380 | 1.30e-24 | 104 |
| Msa1200900 | AT1G31180.1 | 26.042 | 384 | 203 | 13 | 44 | 398 | 46 | 377 | 3.25e-23 | 101 |
| Msa1200900 | AT1G31180.2 | 26.042 | 384 | 203 | 13 | 44 | 398 | 61 | 392 | 5.93e-23 | 100 |
Find 144 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAATAAGGTTTGTCTTAA+AGG | 0.160532 | 8_1:+53983479 | Msa1200900:CDS |
| CGATCCCGTCGCCGGGGATT+AGG | 0.172397 | 8_1:-53983331 | None:intergenic |
| ACGTTGATATTGTAGTTATT+AGG | 0.239338 | 8_1:+53983627 | Msa1200900:CDS |
| CTAGATTTCCATACAGATTT+GGG | 0.243372 | 8_1:-53986559 | None:intergenic |
| AAAGGTTTGTGATTGCAATA+TGG | 0.246112 | 8_1:+53984222 | Msa1200900:intron |
| TCTCAATTATTCTTCTATTC+TGG | 0.254070 | 8_1:+53983089 | Msa1200900:five_prime_UTR |
| ACTAGATTTCCATACAGATT+TGG | 0.273061 | 8_1:-53986560 | None:intergenic |
| CGTTGATATTGTAGTTATTA+GGG | 0.273382 | 8_1:+53983628 | Msa1200900:CDS |
| CTCACTGGCCACTACAATTC+CGG | 0.276591 | 8_1:+53983015 | Msa1200900:five_prime_UTR |
| TGAATCGATCCGTAAGAATA+AGG | 0.290840 | 8_1:+53983466 | Msa1200900:CDS |
| TCACTTGCTTTCTGTTGTTC+AGG | 0.298640 | 8_1:-53985054 | None:intergenic |
| GTGTTGCATAAACATTATTC+AGG | 0.302311 | 8_1:-53988900 | None:intergenic |
| TGTGCACCCATCAATCAAAT+TGG | 0.309585 | 8_1:+53988860 | Msa1200900:three_prime_UTR |
| TGCCATTGGTGATGAAGGTT+GGG | 0.312141 | 8_1:-53983180 | None:intergenic |
| ATTTCGTTGTATTTAATTCC+AGG | 0.346017 | 8_1:-53985157 | None:intergenic |
| GGGATTAGGGTTACGGGACG+GGG | 0.348439 | 8_1:-53983317 | None:intergenic |
| TTACTGCATCGACAACTTCT+TGG | 0.351267 | 8_1:-53988746 | None:intergenic |
| CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 8_1:+53983677 | Msa1200900:CDS |
| AATACTGCGGCAGGCATTGC+TGG | 0.359026 | 8_1:+53986587 | Msa1200900:CDS |
| GATCCCGTCGCCGGGGATTA+GGG | 0.361349 | 8_1:-53983330 | None:intergenic |
| CCCTTAAATGGAGGTATTAG+TGG | 0.363667 | 8_1:+53988313 | Msa1200900:intron |
| GCTTCATTATATTTGCTTTG+TGG | 0.364344 | 8_1:-53985084 | None:intergenic |
| AGGTGGATTGGTTACTCCTA+TGG | 0.365893 | 8_1:+53983499 | Msa1200900:CDS |
| GGGGATTAGGGTTACGGGAC+GGG | 0.371488 | 8_1:-53983318 | None:intergenic |
| CTTGTTGCCATTGGTGATGA+AGG | 0.379435 | 8_1:-53983185 | None:intergenic |
| AAGGTTTGTGATTGCAATAT+GGG | 0.384383 | 8_1:+53984223 | Msa1200900:intron |
| GGTCAGCAAATGCAGGAAAC+TGG | 0.384422 | 8_1:-53988647 | None:intergenic |
| TCCTGCATTTGCTGACCGTT+TGG | 0.391960 | 8_1:+53988653 | Msa1200900:CDS |
| TTGCCATTGGTGATGAAGGT+TGG | 0.394039 | 8_1:-53983181 | None:intergenic |
| TCGAATTTCTCAAAGTAAAC+TGG | 0.397465 | 8_1:-53983404 | None:intergenic |
| GCTTGCGGATGGTTTGTTCT+TGG | 0.398902 | 8_1:+53985105 | Msa1200900:CDS |
| GCTATTTCCAATTTGATTGA+TGG | 0.405150 | 8_1:-53988867 | None:intergenic |
| GAATGGTTCGGATTGGGATC+GGG | 0.408930 | 8_1:-53983243 | None:intergenic |
| TACTGCATCGACAACTTCTT+GGG | 0.411456 | 8_1:-53988745 | None:intergenic |
| GGGTTGAGAGGAGGTGTTTG+AGG | 0.411998 | 8_1:-53983223 | None:intergenic |
| TGAGAGGAGGTGTTTGAGGA+GGG | 0.412665 | 8_1:-53983219 | None:intergenic |
| AATTGAGAGAATAGTGAAAT+GGG | 0.415803 | 8_1:-53983074 | None:intergenic |
| GCAGGCATTGCTGGAGGCAC+TGG | 0.419145 | 8_1:+53986596 | Msa1200900:CDS |
| TAATTGAGAGAATAGTGAAA+TGG | 0.419545 | 8_1:-53983075 | None:intergenic |
| GTCGCCGGGGATTAGGGTTA+CGG | 0.426544 | 8_1:-53983324 | None:intergenic |
| TAAGACAAACCTTATTCTTA+CGG | 0.426710 | 8_1:-53983475 | None:intergenic |
| GTATTTAATTCCAGGATACT+TGG | 0.429599 | 8_1:-53985149 | None:intergenic |
| ACGGAAACATGGGGTGTGAT+TGG | 0.431080 | 8_1:-53983044 | None:intergenic |
| TGAATGGTTCGGATTGGGAT+CGG | 0.435193 | 8_1:-53983244 | None:intergenic |
| TCACTGGCCACTACAATTCC+GGG | 0.437634 | 8_1:+53983016 | Msa1200900:five_prime_UTR |
| GGGATCGGCCCACTCGTAAC+CGG | 0.440880 | 8_1:+53983347 | Msa1200900:CDS |
| CGGTGTCGTCGAAAGTCTTA+AGG | 0.445057 | 8_1:+53983697 | Msa1200900:CDS |
| TGACTATAAAAGATTGTTCG+AGG | 0.447856 | 8_1:-53988821 | None:intergenic |
| GAGGTGTTTGAGGAGGGGTA+TGG | 0.448718 | 8_1:-53983213 | None:intergenic |
| GGATTAGGGTTACGGGACGG+GGG | 0.451332 | 8_1:-53983316 | None:intergenic |
| TTGAGAGGAGGTGTTTGAGG+AGG | 0.452501 | 8_1:-53983220 | None:intergenic |
| ATGGATCTTCTTGTTGCCAT+TGG | 0.453390 | 8_1:-53983194 | None:intergenic |
| CGGCGCCGTTGAGCAACTAA+TGG | 0.458955 | 8_1:+53983367 | Msa1200900:CDS |
| TTTGAGCAGGGTGCTTCAGC+AGG | 0.462492 | 8_1:+53988537 | Msa1200900:CDS |
| GCCATTGGTGATGAAGGTTG+GGG | 0.464839 | 8_1:-53983179 | None:intergenic |
| AGTGGGCCGATCCCGTCGCC+GGG | 0.472280 | 8_1:-53983338 | None:intergenic |
| TCGCCGGGGATTAGGGTTAC+GGG | 0.472697 | 8_1:-53983323 | None:intergenic |
| GATGGTGAATGGTTCGGATT+GGG | 0.474079 | 8_1:-53983249 | None:intergenic |
| GAGTGGGCCGATCCCGTCGC+CGG | 0.474941 | 8_1:-53983339 | None:intergenic |
| TGAGCATGCTGTGTTTGAGC+AGG | 0.476481 | 8_1:+53988524 | Msa1200900:CDS |
| TTAAGACTTTCGACGACACC+GGG | 0.476912 | 8_1:-53983695 | None:intergenic |
| TCTCATCAGCTATGATGCTT+AGG | 0.477441 | 8_1:+53988619 | Msa1200900:CDS |
| GAGGTTGCCACCAAGTATCC+TGG | 0.478525 | 8_1:+53985139 | Msa1200900:CDS |
| CTAGTTGCAAATACTGCGGC+AGG | 0.479098 | 8_1:+53986578 | Msa1200900:CDS |
| GATGAGAGAAGAAGCGCCAC+TGG | 0.479561 | 8_1:-53988603 | None:intergenic |
| AGATGGTGAATGGTTCGGAT+TGG | 0.479659 | 8_1:-53983250 | None:intergenic |
| GGAGGCACTGGAGTCATGCC+AGG | 0.483629 | 8_1:+53986608 | Msa1200900:CDS |
| AATAAGGTTTGTCTTAAAGG+TGG | 0.484570 | 8_1:+53983482 | Msa1200900:CDS |
| GGTTTGTCTTAAAGGTGGAT+TGG | 0.488656 | 8_1:+53983487 | Msa1200900:CDS |
| CTATTTCCAATTTGATTGAT+GGG | 0.488920 | 8_1:-53988866 | None:intergenic |
| TAACCCTAATCCCCGGCGAC+GGG | 0.492476 | 8_1:+53983327 | Msa1200900:CDS |
| CTTAAGACTTTCGACGACAC+CGG | 0.493025 | 8_1:-53983696 | None:intergenic |
| TCCAAACGGTCAGCAAATGC+AGG | 0.494673 | 8_1:-53988654 | None:intergenic |
| CATTAGTTGCTCAACGGCGC+CGG | 0.494753 | 8_1:-53983366 | None:intergenic |
| GATTAGGGTTACGGGACGGG+GGG | 0.495755 | 8_1:-53983315 | None:intergenic |
| TTTGAGAAATTCGACGTACA+TGG | 0.504755 | 8_1:+53983413 | Msa1200900:CDS |
| CCATTGGTGATGAAGGTTGG+GGG | 0.507099 | 8_1:-53983178 | None:intergenic |
| TATGAATATGATGGTGGTGG+TGG | 0.510998 | 8_1:+53988346 | Msa1200900:CDS |
| GCCCGAGCAGTTTGATGTCA+TGG | 0.512416 | 8_1:+53985216 | Msa1200900:CDS |
| CTAATCCCCGGCGACGGGAT+CGG | 0.517163 | 8_1:+53983332 | Msa1200900:CDS |
| TACCATGACATCAAACTGCT+CGG | 0.517965 | 8_1:-53985218 | None:intergenic |
| AAATATTCTAAAATTCTCAC+TGG | 0.523243 | 8_1:+53983000 | Msa1200900:five_prime_UTR |
| TAAATACAACGAAATTATTG+TGG | 0.523864 | 8_1:+53985165 | Msa1200900:CDS |
| TGGGAAAGTCGACGGAAACA+TGG | 0.527750 | 8_1:-53983055 | None:intergenic |
| TTGGTTACTCCTATGGGTGG+TGG | 0.528515 | 8_1:+53983506 | Msa1200900:CDS |
| CATTGGTGATGAAGGTTGGG+GGG | 0.529186 | 8_1:-53983177 | None:intergenic |
| GGTGGATTGGTTACTCCTAT+GGG | 0.530483 | 8_1:+53983500 | Msa1200900:CDS |
| GAGAGGAGGTGTTTGAGGAG+GGG | 0.532450 | 8_1:-53983218 | None:intergenic |
| TAGGTTACCCCAAATCTGTA+TGG | 0.533364 | 8_1:+53986551 | Msa1200900:intron |
| CGCTTCCATTAGTTGCTCAA+CGG | 0.535249 | 8_1:-53983372 | None:intergenic |
| GGTGGTGGTGAAAGTACTAA+TGG | 0.541278 | 8_1:+53988361 | Msa1200900:CDS |
| TACATGCACCGTCCCGGCGA+CGG | 0.545739 | 8_1:+53983290 | Msa1200900:CDS |
| CATCAAAAGTCGTGATGTTG+TGG | 0.548771 | 8_1:-53984246 | None:intergenic |
| AATACTGAAGGGGAGTATGC+TGG | 0.554823 | 8_1:+53983653 | Msa1200900:CDS |
| GGGAAAGTCGACGGAAACAT+GGG | 0.555276 | 8_1:-53983054 | None:intergenic |
| CGGGGATTAGGGTTACGGGA+CGG | 0.556243 | 8_1:-53983319 | None:intergenic |
| GGTGCTTCAGCAGGAAATGT+TGG | 0.556712 | 8_1:+53988546 | Msa1200900:CDS |
| AGCAAATATAATGAAGCTTG+CGG | 0.556973 | 8_1:+53985090 | Msa1200900:CDS |
| AAGTATCGGACAAAGGATCT+TGG | 0.558261 | 8_1:+53988708 | Msa1200900:CDS |
| TTTAATTCCAGGATACTTGG+TGG | 0.560631 | 8_1:-53985146 | None:intergenic |
| GTTATTAGGGAGAATACTGA+AGG | 0.561297 | 8_1:+53983641 | Msa1200900:CDS |
| ACCATGACATCAAACTGCTC+GGG | 0.568329 | 8_1:-53985217 | None:intergenic |
| GTAACCCTAATCCCCGGCGA+CGG | 0.570101 | 8_1:+53983326 | Msa1200900:CDS |
| GAGCATGCTGTGTTTGAGCA+GGG | 0.577817 | 8_1:+53988525 | Msa1200900:CDS |
| TCAACGGCGCCGGTTACGAG+TGG | 0.578394 | 8_1:-53983356 | None:intergenic |
| TTATTAGGGAGAATACTGAA+GGG | 0.584736 | 8_1:+53983642 | Msa1200900:CDS |
| ATTGGGATCGGGTTGAGAGG+AGG | 0.584800 | 8_1:-53983232 | None:intergenic |
| GTAACCTACATGCACCGTCC+CGG | 0.585438 | 8_1:+53983284 | Msa1200900:CDS |
| GTTCTTGGAATCTTGTCGAG+AGG | 0.585888 | 8_1:+53985120 | Msa1200900:CDS |
| TGCATCGACAACTTCTTGGG+TGG | 0.586969 | 8_1:-53988742 | None:intergenic |
| AATATAATGAAGCTTGCGGA+TGG | 0.592033 | 8_1:+53985094 | Msa1200900:CDS |
| AAATATGAATATGATGGTGG+TGG | 0.595478 | 8_1:+53988343 | Msa1200900:CDS |
| CGGATTGGGATCGGGTTGAG+AGG | 0.596796 | 8_1:-53983235 | None:intergenic |
| TATCGGACAAAGGATCTTGG+AGG | 0.597549 | 8_1:+53988711 | Msa1200900:CDS |
| CAACGGCGCCGGTTACGAGT+GGG | 0.604840 | 8_1:-53983355 | None:intergenic |
| TCATTCTAGAGGGCAAGTAT+CGG | 0.606553 | 8_1:+53988694 | Msa1200900:CDS |
| TAGTGAAATGGGAAAGTCGA+CGG | 0.607391 | 8_1:-53983063 | None:intergenic |
| ATGAGAGAAGAAGCGCCACT+GGG | 0.614739 | 8_1:-53988602 | None:intergenic |
| GTTCGCTTAATGTTCAGTTG+AGG | 0.618363 | 8_1:+53983534 | Msa1200900:CDS |
| GGAATGACCCGGAATTGTAG+TGG | 0.620225 | 8_1:-53983023 | None:intergenic |
| TATTAGGGAGAATACTGAAG+GGG | 0.622910 | 8_1:+53983643 | Msa1200900:CDS |
| AAGCGAAGCAATCATGAATG+AGG | 0.626551 | 8_1:+53984282 | Msa1200900:CDS |
| TCAACGTTATCATGTCGAGT+AGG | 0.631397 | 8_1:-53983611 | None:intergenic |
| TAGATTTCCATACAGATTTG+GGG | 0.633748 | 8_1:-53986558 | None:intergenic |
| TCATGTCGAGTAGGTAACCC+AGG | 0.633861 | 8_1:-53983602 | None:intergenic |
| GAACTAACACCACCACCCAT+AGG | 0.634743 | 8_1:-53983515 | None:intergenic |
| GTATGCTGGTCTTGAACATG+AGG | 0.635401 | 8_1:+53983667 | Msa1200900:CDS |
| GTCGCCGGGACGGTGCATGT+AGG | 0.635610 | 8_1:-53983288 | None:intergenic |
| CGTCCCGTAACCCTAATCCC+CGG | 0.639953 | 8_1:+53983320 | Msa1200900:CDS |
| GTGAAATATGAATATGATGG+TGG | 0.643749 | 8_1:+53988340 | Msa1200900:CDS |
| ATCGGACAAAGGATCTTGGA+GGG | 0.644506 | 8_1:+53988712 | Msa1200900:CDS |
| GGATTGGTTACTCCTATGGG+TGG | 0.645378 | 8_1:+53983503 | Msa1200900:CDS |
| TGACATGAAAGCTGTACCTA+CGG | 0.647259 | 8_1:+53983436 | Msa1200900:CDS |
| ACTGCGGCAGGCATTGCTGG+AGG | 0.647366 | 8_1:+53986590 | Msa1200900:CDS |
| ATTTGGTTACTGTATTGCGA+TGG | 0.652107 | 8_1:-53983121 | None:intergenic |
| AGAGGGCAAGTATCGGACAA+AGG | 0.667139 | 8_1:+53988701 | Msa1200900:CDS |
| TATGTGAAATATGAATATGA+TGG | 0.673258 | 8_1:+53988337 | Msa1200900:CDS |
| GTGGGCCGATCCCGTCGCCG+GGG | 0.685533 | 8_1:-53983337 | None:intergenic |
| GGCACTGGAGTCATGCCAGG+AGG | 0.693153 | 8_1:+53986611 | Msa1200900:CDS |
| GGAAAGTCGACGGAAACATG+GGG | 0.696155 | 8_1:-53983053 | None:intergenic |
| ATCGATTCAAGAACTTCCGT+AGG | 0.726256 | 8_1:-53983452 | None:intergenic |
| AAATCTAGTTGCAAATACTG+CGG | 0.735896 | 8_1:+53986574 | Msa1200900:CDS |
| GGGGTGTGATTGGAATGACC+CGG | 0.736976 | 8_1:-53983034 | None:intergenic |
| ACAAAAGACAGCTAACCCAG+TGG | 0.781740 | 8_1:+53988587 | Msa1200900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACAAAAATGACTATAAT+TGG | - | chr8_1:53984095-53984114 | None:intergenic | 15.0% |
| !!! | GTCATTTTTGTAATAATTTT+AGG | + | chr8_1:53984101-53984120 | Msa1200900:intron | 15.0% |
| !!! | TAGTTTATTTCTTAATTTTG+TGG | + | chr8_1:53984191-53984210 | Msa1200900:intron | 15.0% |
| !!! | AAAAAAAAAAGTACTGAATT+TGG | - | chr8_1:53984770-53984789 | None:intergenic | 15.0% |
| !!! | NNNNNNNNNTCTCTTTTGTT+TGG | + | chr8_1:53985393-53985412 | Msa1200900:intron | 15.0% |
| !!! | TTGAATTTTTTGAATTGTTT+GGG | - | chr8_1:53987026-53987045 | None:intergenic | 15.0% |
| !! | TAAAGACATTAATATGAAAT+AGG | - | chr8_1:53987145-53987164 | None:intergenic | 15.0% |
| !!! | TGTTTGTATAATTTTTTTTG+AGG | + | chr8_1:53987354-53987373 | Msa1200900:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr8_1:53987900-53987919 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr8_1:53987678-53987697 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr8_1:53987809-53987828 | Msa1200900:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr8_1:53987900-53987919 | Msa1200900:intron | 15.0% |
| !!! | AAATATTCTAAAATTCTCAC+TGG | + | chr8_1:53983000-53983019 | Msa1200900:five_prime_UTR | 20.0% |
| !!! | TTAATTGTTTTAATCTTCCT+GGG | + | chr8_1:53983585-53983604 | Msa1200900:CDS | 20.0% |
| !!! | TAATAATTTTAGGTTTGAGT+AGG | + | chr8_1:53984111-53984130 | Msa1200900:intron | 20.0% |
| !!! | GTAGGATTTTGAATATTTTA+AGG | + | chr8_1:53984129-53984148 | Msa1200900:intron | 20.0% |
| !! | TTGAAATTTCATAAATGTGT+AGG | + | chr8_1:53984165-53984184 | Msa1200900:intron | 20.0% |
| !! | TGAAATTTCATAAATGTGTA+GGG | + | chr8_1:53984166-53984185 | Msa1200900:intron | 20.0% |
| !!! | AATTTTGTGGTTTCTTAAAA+AGG | + | chr8_1:53984204-53984223 | Msa1200900:intron | 20.0% |
| !! | TATATAAGTATGTCCTAAAA+TGG | - | chr8_1:53984828-53984847 | None:intergenic | 20.0% |
| !! | AACATTCTCACAAATTATAT+AGG | + | chr8_1:53984881-53984900 | Msa1200900:intron | 20.0% |
| !! | TAAATACAACGAAATTATTG+TGG | + | chr8_1:53985165-53985184 | Msa1200900:CDS | 20.0% |
| !! | CATCATAGATTAAAGAAAAA+TGG | - | chr8_1:53985256-53985275 | None:intergenic | 20.0% |
| !!! | CATTTTTCTTTAATCTATGA+TGG | + | chr8_1:53985254-53985273 | Msa1200900:intron | 20.0% |
| !!! | CTCAATTTTATAAATGTTTC+TGG | - | chr8_1:53985798-53985817 | None:intergenic | 20.0% |
| !! | AGTGAATTTATAAAGTTAAG+TGG | - | chr8_1:53986225-53986244 | None:intergenic | 20.0% |
| !! | AGGTTAATGTTTAAAAACTT+TGG | - | chr8_1:53986274-53986293 | None:intergenic | 20.0% |
| !!! | CTTGAATTTTTTGAATTGTT+TGG | - | chr8_1:53987027-53987046 | None:intergenic | 20.0% |
| !! | CAAACAATTCAAAAAATTCA+AGG | + | chr8_1:53987025-53987044 | Msa1200900:intron | 20.0% |
| !! | TAGACTAATTAAATATAGGT+TGG | - | chr8_1:53987178-53987197 | None:intergenic | 20.0% |
| !! | CTGTTAGACTAATTAAATAT+AGG | - | chr8_1:53987182-53987201 | None:intergenic | 20.0% |
| !!! | TGATAACCTGTTTAAATTTT+AGG | + | chr8_1:53987411-53987430 | Msa1200900:intron | 20.0% |
| !!! | GATAACCTGTTTAAATTTTA+GGG | + | chr8_1:53987412-53987431 | Msa1200900:intron | 20.0% |
| !! | ATTAACCCTAAAATTTAAAC+AGG | - | chr8_1:53987420-53987439 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr8_1:53987548-53987567 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr8_1:53987549-53987568 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr8_1:53987643-53987662 | None:intergenic | 20.0% |
| !! | TATGTGAAATATGAATATGA+TGG | + | chr8_1:53988337-53988356 | Msa1200900:CDS | 20.0% |
| ! | AATTGAGAGAATAGTGAAAT+GGG | - | chr8_1:53983077-53983096 | None:intergenic | 25.0% |
| ! | TAATTGAGAGAATAGTGAAA+TGG | - | chr8_1:53983078-53983097 | None:intergenic | 25.0% |
| ! | TCTCAATTATTCTTCTATTC+TGG | + | chr8_1:53983089-53983108 | Msa1200900:five_prime_UTR | 25.0% |
| ! | TAAGACAAACCTTATTCTTA+CGG | - | chr8_1:53983478-53983497 | None:intergenic | 25.0% |
| ! | AAGAATAAGGTTTGTCTTAA+AGG | + | chr8_1:53983479-53983498 | Msa1200900:CDS | 25.0% |
| !!! | GTTAATTGTTTTAATCTTCC+TGG | + | chr8_1:53983584-53983603 | Msa1200900:CDS | 25.0% |
| ! | ACGTTGATATTGTAGTTATT+AGG | + | chr8_1:53983627-53983646 | Msa1200900:CDS | 25.0% |
| ! | CGTTGATATTGTAGTTATTA+GGG | + | chr8_1:53983628-53983647 | Msa1200900:CDS | 25.0% |
| !!! | TCTTTGTTTTATATTGATCG+AGG | + | chr8_1:53983736-53983755 | Msa1200900:intron | 25.0% |
| ! | TGATTGAGATTTGAGAATAT+CGG | + | chr8_1:53983912-53983931 | Msa1200900:intron | 25.0% |
| ! | ACTCTTTATAAACTCATTTC+AGG | - | chr8_1:53983965-53983984 | None:intergenic | 25.0% |
| ! | AACATTATGGATTCTCTATT+AGG | - | chr8_1:53984043-53984062 | None:intergenic | 25.0% |
| ! | CAATCAATAACCTAGTTTAT+TGG | - | chr8_1:53984373-53984392 | None:intergenic | 25.0% |
| ! | GAAAATAGATGTATTACAGA+AGG | + | chr8_1:53984392-53984411 | Msa1200900:intron | 25.0% |
| ! | GAACTTAAATTAACCTTGAA+TGG | + | chr8_1:53984499-53984518 | Msa1200900:intron | 25.0% |
| !! | ACAACTTCAATTTAAAACGT+TGG | + | chr8_1:53984665-53984684 | Msa1200900:intron | 25.0% |
| !! | TTTTAATCCAAATATTACCC+TGG | - | chr8_1:53984734-53984753 | None:intergenic | 25.0% |
| !! | TTATATAGGTTCTTTTCCTT+TGG | + | chr8_1:53984895-53984914 | Msa1200900:intron | 25.0% |
| ! | AATCTAGATAGATATTCCAA+AGG | - | chr8_1:53984914-53984933 | None:intergenic | 25.0% |
| !!! | TTTGACTTGATATTTTTGGT+AGG | + | chr8_1:53984976-53984995 | Msa1200900:intron | 25.0% |
| ! | ATTTCGTTGTATTTAATTCC+AGG | - | chr8_1:53985160-53985179 | None:intergenic | 25.0% |
| ! | ACAAACAGTTCATGAAAAAA+CGG | - | chr8_1:53985499-53985518 | None:intergenic | 25.0% |
| ! | TGAAAAACCAATAGCAAAAA+AGG | - | chr8_1:53985652-53985671 | None:intergenic | 25.0% |
| ! | TCTAATAGTTCTTAATTTCC+AGG | - | chr8_1:53985743-53985762 | None:intergenic | 25.0% |
| ! | TTCAACCTTTAATGTATCTT+AGG | + | chr8_1:53986120-53986139 | Msa1200900:intron | 25.0% |
| ! | TACATCCTAAGATACATTAA+AGG | - | chr8_1:53986128-53986147 | None:intergenic | 25.0% |
| !! | GAATAATGTTCTAAACTTGA+TGG | + | chr8_1:53986737-53986756 | Msa1200900:intron | 25.0% |
| ! | TCATTAACTACATTAACATC+TGG | + | chr8_1:53986886-53986905 | Msa1200900:intron | 25.0% |
| !! | TTTATACCAGGTTTTCAAAA+AGG | - | chr8_1:53987102-53987121 | None:intergenic | 25.0% |
| ! | TAGACTAAACAATTTATACC+AGG | - | chr8_1:53987114-53987133 | None:intergenic | 25.0% |
| ! | TAGACAGAAGTAGAAATAAA+TGG | + | chr8_1:53987294-53987313 | Msa1200900:intron | 25.0% |
| ! | AGACAGAAGTAGAAATAAAT+GGG | + | chr8_1:53987295-53987314 | Msa1200900:intron | 25.0% |
| !!! | ATTTTTTTTGAGGTCTTTCA+TGG | + | chr8_1:53987364-53987383 | Msa1200900:intron | 25.0% |
| ! | AGGGCAAAAAAACAAAATTA+GGG | - | chr8_1:53987515-53987534 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr8_1:53987837-53987856 | Msa1200900:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr8_1:53987838-53987857 | Msa1200900:intron | 25.0% |
| ! | AATATGCCAAAAATTTGTGA+AGG | + | chr8_1:53988002-53988021 | Msa1200900:intron | 25.0% |
| ! | AATAAAATGTCTGATTGTCT+TGG | + | chr8_1:53988239-53988258 | Msa1200900:intron | 25.0% |
| ! | ATAAAATGTCTGATTGTCTT+GGG | + | chr8_1:53988240-53988259 | Msa1200900:intron | 25.0% |
| ! | ATTTAAGGGTAGAAATATGT+CGG | - | chr8_1:53988302-53988321 | None:intergenic | 25.0% |
| ! | CTATTTCCAATTTGATTGAT+GGG | - | chr8_1:53988869-53988888 | None:intergenic | 25.0% |
| TCGAATTTCTCAAAGTAAAC+TGG | - | chr8_1:53983407-53983426 | None:intergenic | 30.0% | |
| AATAAGGTTTGTCTTAAAGG+TGG | + | chr8_1:53983482-53983501 | Msa1200900:CDS | 30.0% | |
| TTATTAGGGAGAATACTGAA+GGG | + | chr8_1:53983642-53983661 | Msa1200900:CDS | 30.0% | |
| ! | ATTTGAAGTTGTTTGTAGTG+TGG | + | chr8_1:53983847-53983866 | Msa1200900:intron | 30.0% |
| ! | GGTCTTATCTTTATTCTACT+TGG | - | chr8_1:53983944-53983963 | None:intergenic | 30.0% |
| CTAACTCATCCTTACAAAAT+CGG | - | chr8_1:53984006-53984025 | None:intergenic | 30.0% | |
| TACGTGTCTAAAGAACATTA+TGG | - | chr8_1:53984056-53984075 | None:intergenic | 30.0% | |
| AAAGGTTTGTGATTGCAATA+TGG | + | chr8_1:53984222-53984241 | Msa1200900:intron | 30.0% | |
| AAGGTTTGTGATTGCAATAT+GGG | + | chr8_1:53984223-53984242 | Msa1200900:intron | 30.0% | |
| AATCTTGTAGCCAATAAACT+AGG | + | chr8_1:53984360-53984379 | Msa1200900:intron | 30.0% | |
| ! | AATTTAAGTTCGAACCTAAG+AGG | - | chr8_1:53984490-53984509 | None:intergenic | 30.0% |
| AATGGTTACAATTGCATATG+TGG | - | chr8_1:53984579-53984598 | None:intergenic | 30.0% | |
| GTTGGTTAAGTATTCAACAT+TGG | + | chr8_1:53984683-53984702 | Msa1200900:intron | 30.0% | |
| ! | CATTGGAAACTAAGTTGAAA+TGG | + | chr8_1:53984700-53984719 | Msa1200900:intron | 30.0% |
| GCTTCATTATATTTGCTTTG+TGG | - | chr8_1:53985087-53985106 | None:intergenic | 30.0% | |
| AGCAAATATAATGAAGCTTG+CGG | + | chr8_1:53985090-53985109 | Msa1200900:CDS | 30.0% | |
| GTATTTAATTCCAGGATACT+TGG | - | chr8_1:53985152-53985171 | None:intergenic | 30.0% | |
| !! | NNNTCTCTTTTGTTTGGCAA+AGG | + | chr8_1:53985399-53985418 | Msa1200900:intron | 30.0% |
| TGAAAAAACGGAAATGCAAA+TGG | - | chr8_1:53985487-53985506 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCATGAACTGTTTG+TGG | + | chr8_1:53985498-53985517 | Msa1200900:intron | 30.0% |
| !!! | CATGATTCCTTTTTTGCTAT+TGG | + | chr8_1:53985642-53985661 | Msa1200900:intron | 30.0% |
| TAACAATTATCAGATGCTGT+TGG | - | chr8_1:53985838-53985857 | None:intergenic | 30.0% | |
| GCATCTGATAATTGTTAACA+TGG | + | chr8_1:53985841-53985860 | Msa1200900:intron | 30.0% | |
| TAGAGAGTAGAAAAGATTCA+GGG | - | chr8_1:53985914-53985933 | None:intergenic | 30.0% | |
| ATAGAGAGTAGAAAAGATTC+AGG | - | chr8_1:53985915-53985934 | None:intergenic | 30.0% | |
| TAAACAAGGTTTGAATGTCT+AGG | + | chr8_1:53986015-53986034 | Msa1200900:intron | 30.0% | |
| ATCTACACATGAATGAACAA+GGG | - | chr8_1:53986059-53986078 | None:intergenic | 30.0% | |
| TATCTACACATGAATGAACA+AGG | - | chr8_1:53986060-53986079 | None:intergenic | 30.0% | |
| TTAGGATGTAGAAGTTTAGA+GGG | + | chr8_1:53986138-53986157 | Msa1200900:intron | 30.0% | |
| ! | CCTTTTCAAACAGAAAGAAA+GGG | - | chr8_1:53986180-53986199 | None:intergenic | 30.0% |
| ! | TCCTTTTCAAACAGAAAGAA+AGG | - | chr8_1:53986181-53986200 | None:intergenic | 30.0% |
| TTCTTTGGATGGATAAGTTA+GGG | - | chr8_1:53986311-53986330 | None:intergenic | 30.0% | |
| TGTACTTTGTGGAATATTGA+AGG | + | chr8_1:53986350-53986369 | Msa1200900:intron | 30.0% | |
| GTACTTTGTGGAATATTGAA+GGG | + | chr8_1:53986351-53986370 | Msa1200900:intron | 30.0% | |
| TAGATTTCCATACAGATTTG+GGG | - | chr8_1:53986561-53986580 | None:intergenic | 30.0% | |
| CTAGATTTCCATACAGATTT+GGG | - | chr8_1:53986562-53986581 | None:intergenic | 30.0% | |
| ACTAGATTTCCATACAGATT+TGG | - | chr8_1:53986563-53986582 | None:intergenic | 30.0% | |
| AAATCTAGTTGCAAATACTG+CGG | + | chr8_1:53986574-53986593 | Msa1200900:CDS | 30.0% | |
| TAACTAAAAACTATACCTCC+TGG | - | chr8_1:53986629-53986648 | None:intergenic | 30.0% | |
| ATAATCAGATCAAAGCTCTA+AGG | - | chr8_1:53986666-53986685 | None:intergenic | 30.0% | |
| !! | TAGGCAAGAAGGTATTTAAA+AGG | - | chr8_1:53986693-53986712 | None:intergenic | 30.0% |
| ATTAGTGAAATGTGTGCAAA+TGG | + | chr8_1:53986999-53987018 | Msa1200900:intron | 30.0% | |
| ! | TCTATCATAGGCTTTCTTTT+AGG | + | chr8_1:53987066-53987085 | Msa1200900:intron | 30.0% |
| TCTAACAGACTAATATGCAA+TGG | + | chr8_1:53987194-53987213 | Msa1200900:intron | 30.0% | |
| CTAACAGACTAATATGCAAT+GGG | + | chr8_1:53987195-53987214 | Msa1200900:intron | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr8_1:53987931-53987950 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr8_1:53987930-53987949 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr8_1:53987915-53987934 | None:intergenic | 30.0% | |
| CAGGGCAAAAAAACAAAATT+AGG | - | chr8_1:53987516-53987535 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr8_1:53987775-53987794 | None:intergenic | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr8_1:53987915-53987934 | Msa1200900:intron | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+AGG | + | chr8_1:53987931-53987950 | Msa1200900:intron | 30.0% |
| ! | CTACTACCTTCACAAATTTT+TGG | - | chr8_1:53988011-53988030 | None:intergenic | 30.0% |
| AATTTGTGAAGGTAGTAGTA+TGG | + | chr8_1:53988013-53988032 | Msa1200900:intron | 30.0% | |
| !!! | AGACCTAAATTTTGTTGTTG+TGG | + | chr8_1:53988157-53988176 | Msa1200900:intron | 30.0% |
| ATGCCACAACAACAAAATTT+AGG | - | chr8_1:53988163-53988182 | None:intergenic | 30.0% | |
| GGTAGTGTATTTAGGTAAAT+AGG | - | chr8_1:53988195-53988214 | None:intergenic | 30.0% | |
| TTATTATGTAGACAGAGTTG+AGG | - | chr8_1:53988224-53988243 | None:intergenic | 30.0% | |
| TTTAAGGGTAGAAATATGTC+GGG | - | chr8_1:53988301-53988320 | None:intergenic | 30.0% | |
| ! | GACATATTTCTACCCTTAAA+TGG | + | chr8_1:53988301-53988320 | Msa1200900:intron | 30.0% |
| ! | ATATTTCTACCCTTAAATGG+AGG | + | chr8_1:53988304-53988323 | Msa1200900:intron | 30.0% |
| GTGAAATATGAATATGATGG+TGG | + | chr8_1:53988340-53988359 | Msa1200900:CDS | 30.0% | |
| !! | AAATATGAATATGATGGTGG+TGG | + | chr8_1:53988343-53988362 | Msa1200900:CDS | 30.0% |
| ! | TTTCAACAGCATTTTCCAAA+CGG | - | chr8_1:53988671-53988690 | None:intergenic | 30.0% |
| TGTTGAAAAAGTCATTCTAG+AGG | + | chr8_1:53988683-53988702 | Msa1200900:CDS | 30.0% | |
| GTTGAAAAAGTCATTCTAGA+GGG | + | chr8_1:53988684-53988703 | Msa1200900:CDS | 30.0% | |
| TGACTATAAAAGATTGTTCG+AGG | - | chr8_1:53988824-53988843 | None:intergenic | 30.0% | |
| ! | GCTATTTCCAATTTGATTGA+TGG | - | chr8_1:53988870-53988889 | None:intergenic | 30.0% |
| GTGTTGCATAAACATTATTC+AGG | - | chr8_1:53988903-53988922 | None:intergenic | 30.0% | |
| ! | CTTATCACTCTGAATTTTTC+AGG | - | chr8_1:53988950-53988969 | None:intergenic | 30.0% |
| GAAAAATTCAGAGTGATAAG+TGG | + | chr8_1:53988950-53988969 | Msa1200900:three_prime_UTR | 30.0% | |
| ATTTGGTTACTGTATTGCGA+TGG | - | chr8_1:53983124-53983143 | None:intergenic | 35.0% | |
| !! | GGTTTTTGAGAAAAAAAGGG+GGG | - | chr8_1:53983159-53983178 | None:intergenic | 35.0% |
| !! | GGGTTTTTGAGAAAAAAAGG+GGG | - | chr8_1:53983160-53983179 | None:intergenic | 35.0% |
| !! | GGGGTTTTTGAGAAAAAAAG+GGG | - | chr8_1:53983161-53983180 | None:intergenic | 35.0% |
| !! | GGGGGTTTTTGAGAAAAAAA+GGG | - | chr8_1:53983162-53983181 | None:intergenic | 35.0% |
| !!! | TTTTGAGATGGTGAATGGTT+CGG | - | chr8_1:53983258-53983277 | None:intergenic | 35.0% |
| TTTGAGAAATTCGACGTACA+TGG | + | chr8_1:53983413-53983432 | Msa1200900:CDS | 35.0% | |
| TGAATCGATCCGTAAGAATA+AGG | + | chr8_1:53983466-53983485 | Msa1200900:CDS | 35.0% | |
| GTTATTAGGGAGAATACTGA+AGG | + | chr8_1:53983641-53983660 | Msa1200900:CDS | 35.0% | |
| TATTAGGGAGAATACTGAAG+GGG | + | chr8_1:53983643-53983662 | Msa1200900:CDS | 35.0% | |
| ATTGATCGAGGAGAAAAACA+TGG | + | chr8_1:53983748-53983767 | Msa1200900:intron | 35.0% | |
| ! | CTCTACAATCCGATTTTGTA+AGG | + | chr8_1:53983994-53984013 | Msa1200900:intron | 35.0% |
| TTTAGACACGTATGTTTGCA+AGG | + | chr8_1:53984064-53984083 | Msa1200900:intron | 35.0% | |
| TTAGACACGTATGTTTGCAA+GGG | + | chr8_1:53984065-53984084 | Msa1200900:intron | 35.0% | |
| TTTCTCTTTCCAAACCTCTT+AGG | + | chr8_1:53984473-53984492 | Msa1200900:intron | 35.0% | |
| ! | ACTAAGTTGAAATGGTGTCA+AGG | + | chr8_1:53984708-53984727 | Msa1200900:intron | 35.0% |
| ! | TTGTTGTACTGATGCAGTAT+TGG | + | chr8_1:53984940-53984959 | Msa1200900:intron | 35.0% |
| ! | TGTTGTACTGATGCAGTATT+GGG | + | chr8_1:53984941-53984960 | Msa1200900:intron | 35.0% |
| !!! | GCGGTTTGACTTGATATTTT+TGG | + | chr8_1:53984972-53984991 | Msa1200900:intron | 35.0% |
| AATATAATGAAGCTTGCGGA+TGG | + | chr8_1:53985094-53985113 | Msa1200900:CDS | 35.0% | |
| TTTAATTCCAGGATACTTGG+TGG | - | chr8_1:53985149-53985168 | None:intergenic | 35.0% | |
| ATCAACTTAGAAACGAGTCA+TGG | + | chr8_1:53985572-53985591 | Msa1200900:intron | 35.0% | |
| ATTTCCAGGATAATGTGCTT+AGG | - | chr8_1:53985729-53985748 | None:intergenic | 35.0% | |
| GATCTCAACTTACATGGTTT+GGG | - | chr8_1:53985969-53985988 | None:intergenic | 35.0% | |
| TGATCTCAACTTACATGGTT+TGG | - | chr8_1:53985970-53985989 | None:intergenic | 35.0% | |
| GACTTTGATCTCAACTTACA+TGG | - | chr8_1:53985975-53985994 | None:intergenic | 35.0% | |
| TGTTTATCCATGTCACAGAA+GGG | - | chr8_1:53986001-53986020 | None:intergenic | 35.0% | |
| TTGTTTATCCATGTCACAGA+AGG | - | chr8_1:53986002-53986021 | None:intergenic | 35.0% | |
| TTCTGTGACATGGATAAACA+AGG | + | chr8_1:53986001-53986020 | Msa1200900:intron | 35.0% | |
| CTTAGGATGTAGAAGTTTAG+AGG | + | chr8_1:53986137-53986156 | Msa1200900:intron | 35.0% | |
| ATGTAGAAGTTTAGAGGGAA+GGG | + | chr8_1:53986143-53986162 | Msa1200900:intron | 35.0% | |
| CCCTTTCTTTCTGTTTGAAA+AGG | + | chr8_1:53986177-53986196 | Msa1200900:intron | 35.0% | |
| TCTTTCTGTTTGAAAAGGAG+AGG | + | chr8_1:53986182-53986201 | Msa1200900:intron | 35.0% | |
| TCTTTGGATGGATAAGTTAG+GGG | - | chr8_1:53986310-53986329 | None:intergenic | 35.0% | |
| GTTCTTTGGATGGATAAGTT+AGG | - | chr8_1:53986312-53986331 | None:intergenic | 35.0% | |
| TAAGCAAGAATCATTGCTGT+GGG | + | chr8_1:53986407-53986426 | Msa1200900:intron | 35.0% | |
| AGTTGCAAGACAAAATCATC+TGG | - | chr8_1:53986452-53986471 | None:intergenic | 35.0% | |
| TCAGATAACGTGGTAAAAGT+AGG | - | chr8_1:53986712-53986731 | None:intergenic | 35.0% | |
| TATTCACACATCAGATAACG+TGG | - | chr8_1:53986722-53986741 | None:intergenic | 35.0% | |
| !! | TGTTCTAAACTTGATGGACT+AGG | + | chr8_1:53986743-53986762 | Msa1200900:intron | 35.0% |
| ! | GCTTGTCTAGATGATTGTTT+TGG | + | chr8_1:53986780-53986799 | Msa1200900:intron | 35.0% |
| !! | TCATAGGCTTTCTTTTAGGT+TGG | + | chr8_1:53987070-53987089 | Msa1200900:intron | 35.0% |
| ! | CCAGGTTTTCAAAAAGGTTA+GGG | - | chr8_1:53987096-53987115 | None:intergenic | 35.0% |
| ! | ACCAGGTTTTCAAAAAGGTT+AGG | - | chr8_1:53987097-53987116 | None:intergenic | 35.0% |
| ! | AGACTAATATGCAATGGGTT+AGG | + | chr8_1:53987200-53987219 | Msa1200900:intron | 35.0% |
| !! | CAAACTGAGTTTTATAAGCC+AGG | + | chr8_1:53987319-53987338 | Msa1200900:intron | 35.0% |
| CAAACAAACAAATCAGAACC+TGG | - | chr8_1:53987340-53987359 | None:intergenic | 35.0% | |
| !!! | TTTGCGATAATTTTTTGCGG+AGG | - | chr8_1:53987640-53987659 | None:intergenic | 35.0% |
| !!! | GGCTTTTTGGTAGTGTATTT+AGG | - | chr8_1:53988203-53988222 | None:intergenic | 35.0% |
| CCACTAATACCTCCATTTAA+GGG | - | chr8_1:53988316-53988335 | None:intergenic | 35.0% | |
| !! | TGAAAGTACTAATGGTAGGT+TGG | + | chr8_1:53988369-53988388 | Msa1200900:intron | 35.0% |
| GGTTTGTGTTTGTGATTATC+AGG | - | chr8_1:53988472-53988491 | None:intergenic | 35.0% | |
| ACCAACATTACCTGCAAAAA+AGG | - | chr8_1:53988502-53988521 | None:intergenic | 35.0% | |
| TAGTGAAATGGGAAAGTCGA+CGG | - | chr8_1:53983066-53983085 | None:intergenic | 40.0% | |
| !! | GGGGGGTTTTTGAGAAAAAA+AGG | - | chr8_1:53983163-53983182 | None:intergenic | 40.0% |
| ATGGATCTTCTTGTTGCCAT+TGG | - | chr8_1:53983197-53983216 | None:intergenic | 40.0% | |
| !!! | CATCGTTTTGAGATGGTGAA+TGG | - | chr8_1:53983263-53983282 | None:intergenic | 40.0% |
| TGACATGAAAGCTGTACCTA+CGG | + | chr8_1:53983436-53983455 | Msa1200900:CDS | 40.0% | |
| ! | ATCGATTCAAGAACTTCCGT+AGG | - | chr8_1:53983455-53983474 | None:intergenic | 40.0% |
| GGTTTGTCTTAAAGGTGGAT+TGG | + | chr8_1:53983487-53983506 | Msa1200900:CDS | 40.0% | |
| GTTCGCTTAATGTTCAGTTG+AGG | + | chr8_1:53983534-53983553 | Msa1200900:CDS | 40.0% | |
| TCAACGTTATCATGTCGAGT+AGG | - | chr8_1:53983614-53983633 | None:intergenic | 40.0% | |
| ! | TCAAGTCTTATCCCACTAAG+TGG | - | chr8_1:53983801-53983820 | None:intergenic | 40.0% |
| CATCAAAAGTCGTGATGTTG+TGG | - | chr8_1:53984249-53984268 | None:intergenic | 40.0% | |
| AAGCGAAGCAATCATGAATG+AGG | + | chr8_1:53984282-53984301 | Msa1200900:CDS | 40.0% | |
| AAGTTCGAACCTAAGAGGTT+TGG | - | chr8_1:53984485-53984504 | None:intergenic | 40.0% | |
| GAAACGTACATGTAAGGAGA+AGG | - | chr8_1:53984540-53984559 | None:intergenic | 40.0% | |
| GAGGAAGAAACGTACATGTA+AGG | - | chr8_1:53984546-53984565 | None:intergenic | 40.0% | |
| !! | ACGTTTCTTCCTCTAAAACC+TGG | + | chr8_1:53984553-53984572 | Msa1200900:intron | 40.0% |
| TTACAATTGCATATGTGGCC+AGG | - | chr8_1:53984574-53984593 | None:intergenic | 40.0% | |
| !! | AAACGTGCTGATTAGCGAAA+TGG | - | chr8_1:53984597-53984616 | None:intergenic | 40.0% |
| ATTTCGCTAATCAGCACGTT+TGG | + | chr8_1:53984596-53984615 | Msa1200900:intron | 40.0% | |
| ! | GATGTGAGATACTGGGTTTT+GGG | - | chr8_1:53984633-53984652 | None:intergenic | 40.0% |
| ! | TGATGTGAGATACTGGGTTT+TGG | - | chr8_1:53984634-53984653 | None:intergenic | 40.0% |
| CGTCATTGATGTGAGATACT+GGG | - | chr8_1:53984640-53984659 | None:intergenic | 40.0% | |
| CCAGTATCTCACATCAATGA+CGG | + | chr8_1:53984638-53984657 | Msa1200900:intron | 40.0% | |
| TCACTTGCTTTCTGTTGTTC+AGG | - | chr8_1:53985057-53985076 | None:intergenic | 40.0% | |
| TACCATGACATCAAACTGCT+CGG | - | chr8_1:53985221-53985240 | None:intergenic | 40.0% | |
| ATGGACTCATAATACGAGTG+AGG | - | chr8_1:53985468-53985487 | None:intergenic | 40.0% | |
| !!! | TGCTATTGGTTTTTCACTGC+TGG | + | chr8_1:53985656-53985675 | Msa1200900:intron | 40.0% |
| ATCTCCTAAGCACATTATCC+TGG | + | chr8_1:53985722-53985741 | Msa1200900:intron | 40.0% | |
| GGCAGAGAAGAACTGTTATT+TGG | - | chr8_1:53985868-53985887 | None:intergenic | 40.0% | |
| AAGATTCAGGGTAGGTCAAA+TGG | - | chr8_1:53985902-53985921 | None:intergenic | 40.0% | |
| GAGTAGAAAAGATTCAGGGT+AGG | - | chr8_1:53985910-53985929 | None:intergenic | 40.0% | |
| GATGTAGAAGTTTAGAGGGA+AGG | + | chr8_1:53986142-53986161 | Msa1200900:intron | 40.0% | |
| TGGATAAGTTAGGGGAGAAA+GGG | - | chr8_1:53986302-53986321 | None:intergenic | 40.0% | |
| ATGGATAAGTTAGGGGAGAA+AGG | - | chr8_1:53986303-53986322 | None:intergenic | 40.0% | |
| AAGTACATCTACATCCTCCA+GGG | - | chr8_1:53986337-53986356 | None:intergenic | 40.0% | |
| AAAGTACATCTACATCCTCC+AGG | - | chr8_1:53986338-53986357 | None:intergenic | 40.0% | |
| GAGGATGTAGATGTACTTTG+TGG | + | chr8_1:53986339-53986358 | Msa1200900:intron | 40.0% | |
| CTAAGCAAGAATCATTGCTG+TGG | + | chr8_1:53986406-53986425 | Msa1200900:intron | 40.0% | |
| GACAAAATCATCTGGACCTA+AGG | - | chr8_1:53986444-53986463 | None:intergenic | 40.0% | |
| ! | GATTTTGTCTTGCAACTCAC+TGG | + | chr8_1:53986455-53986474 | Msa1200900:intron | 40.0% |
| ! | GCATACTTTTACCTTGTGCT+AGG | + | chr8_1:53986532-53986551 | Msa1200900:intron | 40.0% |
| TAGGTTACCCCAAATCTGTA+TGG | + | chr8_1:53986551-53986570 | Msa1200900:intron | 40.0% | |
| TCTGACCTGTTGTCTATCAT+AGG | + | chr8_1:53987054-53987073 | Msa1200900:intron | 40.0% | |
| GAAAGCCTATGATAGACAAC+AGG | - | chr8_1:53987062-53987081 | None:intergenic | 40.0% | |
| !! | CCCTAACCTTTTTGAAAACC+TGG | + | chr8_1:53987093-53987112 | Msa1200900:intron | 40.0% |
| TGAGTAGGGACTAATACTCA+GGG | - | chr8_1:53987534-53987553 | None:intergenic | 40.0% | |
| TTGAGTAGGGACTAATACTC+AGG | - | chr8_1:53987535-53987554 | None:intergenic | 40.0% | |
| ! | TAGACAGAGTTGAGGCTTTT+TGG | - | chr8_1:53988216-53988235 | None:intergenic | 40.0% |
| !! | CCCTTAAATGGAGGTATTAG+TGG | + | chr8_1:53988313-53988332 | Msa1200900:intron | 40.0% |
| GCCACTAATACCTCCATTTA+AGG | - | chr8_1:53988317-53988336 | None:intergenic | 40.0% | |
| !! | TATGAATATGATGGTGGTGG+TGG | + | chr8_1:53988346-53988365 | Msa1200900:CDS | 40.0% |
| !! | GTGGTGAAAGTACTAATGGT+AGG | + | chr8_1:53988365-53988384 | Msa1200900:intron | 40.0% |
| !!! | ACCATTTGTGCCTTTTTTGC+AGG | + | chr8_1:53988489-53988508 | Msa1200900:intron | 40.0% |
| ! | ACCTGCAAAAAAGGCACAAA+TGG | - | chr8_1:53988493-53988512 | None:intergenic | 40.0% |
| !!! | GCCTTTTTTGCAGGTAATGT+TGG | + | chr8_1:53988498-53988517 | Msa1200900:intron | 40.0% |
| TCTCATCAGCTATGATGCTT+AGG | + | chr8_1:53988619-53988638 | Msa1200900:CDS | 40.0% | |
| ! | TCATTCTAGAGGGCAAGTAT+CGG | + | chr8_1:53988694-53988713 | Msa1200900:CDS | 40.0% |
| !! | AAGTATCGGACAAAGGATCT+TGG | + | chr8_1:53988708-53988727 | Msa1200900:CDS | 40.0% |
| ! | TACTGCATCGACAACTTCTT+GGG | - | chr8_1:53988748-53988767 | None:intergenic | 40.0% |
| ! | TTACTGCATCGACAACTTCT+TGG | - | chr8_1:53988749-53988768 | None:intergenic | 40.0% |
| TGTGCACCCATCAATCAAAT+TGG | + | chr8_1:53988860-53988879 | Msa1200900:three_prime_UTR | 40.0% | |
| !! | TGCCATTGGTGATGAAGGTT+GGG | - | chr8_1:53983183-53983202 | None:intergenic | 45.0% |
| !! | TTGCCATTGGTGATGAAGGT+TGG | - | chr8_1:53983184-53983203 | None:intergenic | 45.0% |
| !! | CTTGTTGCCATTGGTGATGA+AGG | - | chr8_1:53983188-53983207 | None:intergenic | 45.0% |
| ! | TGAATGGTTCGGATTGGGAT+CGG | - | chr8_1:53983247-53983266 | None:intergenic | 45.0% |
| ! | GATGGTGAATGGTTCGGATT+GGG | - | chr8_1:53983252-53983271 | None:intergenic | 45.0% |
| ! | AGATGGTGAATGGTTCGGAT+TGG | - | chr8_1:53983253-53983272 | None:intergenic | 45.0% |
| !!! | GGTTACGCATCGTTTTGAGA+TGG | - | chr8_1:53983270-53983289 | None:intergenic | 45.0% |
| CGCTTCCATTAGTTGCTCAA+CGG | - | chr8_1:53983375-53983394 | None:intergenic | 45.0% | |
| !! | AGGTGGATTGGTTACTCCTA+TGG | + | chr8_1:53983499-53983518 | Msa1200900:CDS | 45.0% |
| !! | GGTGGATTGGTTACTCCTAT+GGG | + | chr8_1:53983500-53983519 | Msa1200900:CDS | 45.0% |
| ! | AATACTGAAGGGGAGTATGC+TGG | + | chr8_1:53983653-53983672 | Msa1200900:CDS | 45.0% |
| !! | GTATGCTGGTCTTGAACATG+AGG | + | chr8_1:53983667-53983686 | Msa1200900:CDS | 45.0% |
| CTTGAACATGAGGTTGTTCC+CGG | + | chr8_1:53983677-53983696 | Msa1200900:CDS | 45.0% | |
| TTAAGACTTTCGACGACACC+GGG | - | chr8_1:53983698-53983717 | None:intergenic | 45.0% | |
| CTTAAGACTTTCGACGACAC+CGG | - | chr8_1:53983699-53983718 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTGGTGT+CGG | - | chr8_1:53983795-53983814 | None:intergenic | 45.0% | |
| GTACATGTAAGGAGAAGGCA+TGG | - | chr8_1:53984535-53984554 | None:intergenic | 45.0% | |
| !! | CATATGTGGCCAGGTTTTAG+AGG | - | chr8_1:53984565-53984584 | None:intergenic | 45.0% |
| GCTAATCAGCACGTTTGGTT+GGG | + | chr8_1:53984601-53984620 | Msa1200900:intron | 45.0% | |
| CCGTCATTGATGTGAGATAC+TGG | - | chr8_1:53984641-53984660 | None:intergenic | 45.0% | |
| ! | TTGAAATGGTGTCAAGGCCA+GGG | + | chr8_1:53984714-53984733 | Msa1200900:intron | 45.0% |
| GTCAAGGCCAGGGTAATATT+TGG | + | chr8_1:53984724-53984743 | Msa1200900:intron | 45.0% | |
| ! | GAGCTGTCGTCTACCATTTT+AGG | + | chr8_1:53984812-53984831 | Msa1200900:intron | 45.0% |
| ! | GCAGTATTGGGTTGTGTTTG+CGG | + | chr8_1:53984953-53984972 | Msa1200900:intron | 45.0% |
| GTTCTTGGAATCTTGTCGAG+AGG | + | chr8_1:53985120-53985139 | Msa1200900:CDS | 45.0% | |
| ACCATGACATCAAACTGCTC+GGG | - | chr8_1:53985220-53985239 | None:intergenic | 45.0% | |
| !! | TTCACTGCTGGTTCAGTCAA+AGG | + | chr8_1:53985668-53985687 | Msa1200900:intron | 45.0% |
| !! | TGCTGGTTCAGTCAAAGGTT+GGG | + | chr8_1:53985673-53985692 | Msa1200900:intron | 45.0% |
| TCAGTCAAAGGTTGGGAACA+TGG | + | chr8_1:53985680-53985699 | Msa1200900:intron | 45.0% | |
| CAGTCAAAGGTTGGGAACAT+GGG | + | chr8_1:53985681-53985700 | Msa1200900:intron | 45.0% | |
| AGGTTGGGAACATGGGAAAA+AGG | + | chr8_1:53985688-53985707 | Msa1200900:intron | 45.0% | |
| ATTCAGGGTAGGTCAAATGG+AGG | - | chr8_1:53985899-53985918 | None:intergenic | 45.0% | |
| GGCATGTGTAAAGGAGAATG+TGG | - | chr8_1:53985948-53985967 | None:intergenic | 45.0% | |
| ! | CATGGTTTGGGCATGTGTAA+AGG | - | chr8_1:53985957-53985976 | None:intergenic | 45.0% |
| AGTCAAACCCTTCTGTGACA+TGG | + | chr8_1:53985991-53986010 | Msa1200900:intron | 45.0% | |
| TAGAAGTTTAGAGGGAAGGG+AGG | + | chr8_1:53986146-53986165 | Msa1200900:intron | 45.0% | |
| AGAAGTTTAGAGGGAAGGGA+GGG | + | chr8_1:53986147-53986166 | Msa1200900:intron | 45.0% | |
| TTAGGGGAGAAAGGGATTGA+AGG | - | chr8_1:53986294-53986313 | None:intergenic | 45.0% | |
| ATCCATCCAAAGAACAACCC+TGG | + | chr8_1:53986317-53986336 | Msa1200900:intron | 45.0% | |
| CAAGAATCATTGCTGTGGGT+TGG | + | chr8_1:53986411-53986430 | Msa1200900:intron | 45.0% | |
| !! | GTGGGTTGGTTATCAACCTT+AGG | + | chr8_1:53986425-53986444 | Msa1200900:intron | 45.0% |
| ! | ATTTGGGGTAACCTAGCACA+AGG | - | chr8_1:53986546-53986565 | None:intergenic | 45.0% |
| CGTGGTAAAAGTAGGCAAGA+AGG | - | chr8_1:53986704-53986723 | None:intergenic | 45.0% | |
| TGTCTTGGGCAAACTAGACT+AGG | + | chr8_1:53988254-53988273 | Msa1200900:intron | 45.0% | |
| !! | GGTGGTGGTGAAAGTACTAA+TGG | + | chr8_1:53988361-53988380 | Msa1200900:CDS | 45.0% |
| ! | TACTAATGGTAGGTTGGAGC+TGG | + | chr8_1:53988375-53988394 | Msa1200900:intron | 45.0% |
| ! | TTGTTGGGTTTAGGGCTTCT+GGG | + | chr8_1:53988398-53988417 | Msa1200900:intron | 45.0% |
| ACAAAAGACAGCTAACCCAG+TGG | + | chr8_1:53988587-53988606 | Msa1200900:CDS | 45.0% | |
| TATCGGACAAAGGATCTTGG+AGG | + | chr8_1:53988711-53988730 | Msa1200900:CDS | 45.0% | |
| ATCGGACAAAGGATCTTGGA+GGG | + | chr8_1:53988712-53988731 | Msa1200900:CDS | 45.0% | |
| !! | ATATAAATATTTGAAAAATA+AGG | + | chr8_1:53984845-53984864 | Msa1200900:intron | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr8_1:53987870-53987889 | Msa1200900:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr8_1:53987871-53987890 | Msa1200900:intron | 5.0% |
| CTCACTGGCCACTACAATTC+CGG | + | chr8_1:53983015-53983034 | Msa1200900:five_prime_UTR | 50.0% | |
| TCACTGGCCACTACAATTCC+GGG | + | chr8_1:53983016-53983035 | Msa1200900:five_prime_UTR | 50.0% | |
| GGAATGACCCGGAATTGTAG+TGG | - | chr8_1:53983026-53983045 | None:intergenic | 50.0% | |
| ACGGAAACATGGGGTGTGAT+TGG | - | chr8_1:53983047-53983066 | None:intergenic | 50.0% | |
| GGAAAGTCGACGGAAACATG+GGG | - | chr8_1:53983056-53983075 | None:intergenic | 50.0% | |
| GGGAAAGTCGACGGAAACAT+GGG | - | chr8_1:53983057-53983076 | None:intergenic | 50.0% | |
| TGGGAAAGTCGACGGAAACA+TGG | - | chr8_1:53983058-53983077 | None:intergenic | 50.0% | |
| !! | CATTGGTGATGAAGGTTGGG+GGG | - | chr8_1:53983180-53983199 | None:intergenic | 50.0% |
| !! | CCATTGGTGATGAAGGTTGG+GGG | - | chr8_1:53983181-53983200 | None:intergenic | 50.0% |
| !! | GCCATTGGTGATGAAGGTTG+GGG | - | chr8_1:53983182-53983201 | None:intergenic | 50.0% |
| !! | TGAGAGGAGGTGTTTGAGGA+GGG | - | chr8_1:53983222-53983241 | None:intergenic | 50.0% |
| !! | TTGAGAGGAGGTGTTTGAGG+AGG | - | chr8_1:53983223-53983242 | None:intergenic | 50.0% |
| ! | GAATGGTTCGGATTGGGATC+GGG | - | chr8_1:53983246-53983265 | None:intergenic | 50.0% |
| !! | GGATTGGTTACTCCTATGGG+TGG | + | chr8_1:53983503-53983522 | Msa1200900:CDS | 50.0% |
| TTGGTTACTCCTATGGGTGG+TGG | + | chr8_1:53983506-53983525 | Msa1200900:CDS | 50.0% | |
| GAACTAACACCACCACCCAT+AGG | - | chr8_1:53983518-53983537 | None:intergenic | 50.0% | |
| TCATGTCGAGTAGGTAACCC+AGG | - | chr8_1:53983605-53983624 | None:intergenic | 50.0% | |
| !! | CGGTGTCGTCGAAAGTCTTA+AGG | + | chr8_1:53983697-53983716 | Msa1200900:CDS | 50.0% |
| TTGTAGCCGACACCACTTAG+TGG | + | chr8_1:53983786-53983805 | Msa1200900:intron | 50.0% | |
| TGTAGCCGACACCACTTAGT+GGG | + | chr8_1:53983787-53983806 | Msa1200900:intron | 50.0% | |
| ! | CCTCAGGAGATTTTGCTCTG+GGG | - | chr8_1:53984318-53984337 | None:intergenic | 50.0% |
| ! | CCCTCAGGAGATTTTGCTCT+GGG | - | chr8_1:53984319-53984338 | None:intergenic | 50.0% |
| CCCAGAGCAAAATCTCCTGA+GGG | + | chr8_1:53984316-53984335 | Msa1200900:intron | 50.0% | |
| ! | TCCCTCAGGAGATTTTGCTC+TGG | - | chr8_1:53984320-53984339 | None:intergenic | 50.0% |
| GCAAAATCTCCTGAGGGAAG+AGG | + | chr8_1:53984322-53984341 | Msa1200900:intron | 50.0% | |
| CATCAAAAGCCTCTTCCCTC+AGG | - | chr8_1:53984334-53984353 | None:intergenic | 50.0% | |
| ! | CTGAGGGAAGAGGCTTTTGA+TGG | + | chr8_1:53984332-53984351 | Msa1200900:intron | 50.0% |
| GCAAAAGCTCTTGAGGGAAG+AGG | + | chr8_1:53984442-53984461 | Msa1200900:intron | 50.0% | |
| ! | AAGGAGAAGGCATGGCAAGA+CGG | - | chr8_1:53984527-53984546 | None:intergenic | 50.0% |
| CGCTAATCAGCACGTTTGGT+TGG | + | chr8_1:53984600-53984619 | Msa1200900:intron | 50.0% | |
| ! | GTTGAAATGGTGTCAAGGCC+AGG | + | chr8_1:53984713-53984732 | Msa1200900:intron | 50.0% |
| !! | GCTTGCGGATGGTTTGTTCT+TGG | + | chr8_1:53985105-53985124 | Msa1200900:CDS | 50.0% |
| !! | CTGCTGGTTCAGTCAAAGGT+TGG | + | chr8_1:53985672-53985691 | Msa1200900:intron | 50.0% |
| GGTCAAATGGAGGCAGAGAA+AGG | - | chr8_1:53985889-53985908 | None:intergenic | 50.0% | |
| GAAGTTTAGAGGGAAGGGAG+GGG | + | chr8_1:53986148-53986167 | Msa1200900:intron | 50.0% | |
| CTCCAGGGTTGTTCTTTGGA+TGG | - | chr8_1:53986322-53986341 | None:intergenic | 50.0% | |
| CATCCAAAGAACAACCCTGG+AGG | + | chr8_1:53986320-53986339 | Msa1200900:intron | 50.0% | |
| CATCCTCCAGGGTTGTTCTT+TGG | - | chr8_1:53986326-53986345 | None:intergenic | 50.0% | |
| CTAGTTGCAAATACTGCGGC+AGG | + | chr8_1:53986578-53986597 | Msa1200900:CDS | 50.0% | |
| CCTAGACAGTGAGTCAACAG+AGG | - | chr8_1:53986930-53986949 | None:intergenic | 50.0% | |
| !! | CCTCTGTTGACTCACTGTCT+AGG | + | chr8_1:53986927-53986946 | Msa1200900:intron | 50.0% |
| GGCAAACTAGACTAGGCCAT+AGG | + | chr8_1:53988261-53988280 | Msa1200900:intron | 50.0% | |
| ! | TATGTCGGGTTGTCTGACAG+AGG | - | chr8_1:53988287-53988306 | None:intergenic | 50.0% |
| ! | GTAGGTTGGAGCTGGTTGTT+GGG | + | chr8_1:53988383-53988402 | Msa1200900:intron | 50.0% |
| TGGAGCTGGTTGTTGGGTTT+AGG | + | chr8_1:53988389-53988408 | Msa1200900:intron | 50.0% | |
| GGAGCTGGTTGTTGGGTTTA+GGG | + | chr8_1:53988390-53988409 | Msa1200900:intron | 50.0% | |
| ! | GTTGTTGGGTTTAGGGCTTC+TGG | + | chr8_1:53988397-53988416 | Msa1200900:intron | 50.0% |
| TGAGCATGCTGTGTTTGAGC+AGG | + | chr8_1:53988524-53988543 | Msa1200900:CDS | 50.0% | |
| GAGCATGCTGTGTTTGAGCA+GGG | + | chr8_1:53988525-53988544 | Msa1200900:CDS | 50.0% | |
| GGTGCTTCAGCAGGAAATGT+TGG | + | chr8_1:53988546-53988565 | Msa1200900:CDS | 50.0% | |
| !! | ATGAGAGAAGAAGCGCCACT+GGG | - | chr8_1:53988605-53988624 | None:intergenic | 50.0% |
| GGTCAGCAAATGCAGGAAAC+TGG | - | chr8_1:53988650-53988669 | None:intergenic | 50.0% | |
| ! | TCCTGCATTTGCTGACCGTT+TGG | + | chr8_1:53988653-53988672 | Msa1200900:CDS | 50.0% |
| TCCAAACGGTCAGCAAATGC+AGG | - | chr8_1:53988657-53988676 | None:intergenic | 50.0% | |
| !! | AGAGGGCAAGTATCGGACAA+AGG | + | chr8_1:53988701-53988720 | Msa1200900:CDS | 50.0% |
| ! | TGCATCGACAACTTCTTGGG+TGG | - | chr8_1:53988745-53988764 | None:intergenic | 50.0% |
| GGGGTGTGATTGGAATGACC+CGG | - | chr8_1:53983037-53983056 | None:intergenic | 55.0% | |
| ! | GGGGGTGTGAGTGTGAGATT+TGG | - | chr8_1:53983141-53983160 | None:intergenic | 55.0% |
| CCCCCAACCTTCATCACCAA+TGG | + | chr8_1:53983178-53983197 | Msa1200900:exon | 55.0% | |
| ! | GAGGTGTTTGAGGAGGGGTA+TGG | - | chr8_1:53983216-53983235 | None:intergenic | 55.0% |
| !! | GAGAGGAGGTGTTTGAGGAG+GGG | - | chr8_1:53983221-53983240 | None:intergenic | 55.0% |
| !! | GGGTTGAGAGGAGGTGTTTG+AGG | - | chr8_1:53983226-53983245 | None:intergenic | 55.0% |
| !! | ATTGGGATCGGGTTGAGAGG+AGG | - | chr8_1:53983235-53983254 | None:intergenic | 55.0% |
| GTAACCTACATGCACCGTCC+CGG | + | chr8_1:53983284-53983303 | Msa1200900:CDS | 55.0% | |
| CATTAGTTGCTCAACGGCGC+CGG | - | chr8_1:53983369-53983388 | None:intergenic | 55.0% | |
| CCCCAGAGCAAAATCTCCTG+AGG | + | chr8_1:53984315-53984334 | Msa1200900:intron | 55.0% | |
| ! | AGCTTTTGCGCTGGGGTTAC+GGG | - | chr8_1:53984431-53984450 | None:intergenic | 55.0% |
| ! | GAGCTTTTGCGCTGGGGTTA+CGG | - | chr8_1:53984432-53984451 | None:intergenic | 55.0% |
| ! | CCTCAAGAGCTTTTGCGCTG+GGG | - | chr8_1:53984438-53984457 | None:intergenic | 55.0% |
| ! | CCCTCAAGAGCTTTTGCGCT+GGG | - | chr8_1:53984439-53984458 | None:intergenic | 55.0% |
| CCCAGCGCAAAAGCTCTTGA+GGG | + | chr8_1:53984436-53984455 | Msa1200900:intron | 55.0% | |
| ! | TCCCTCAAGAGCTTTTGCGC+TGG | - | chr8_1:53984440-53984459 | None:intergenic | 55.0% |
| TGGCAAGACGGAGCCATTCA+AGG | - | chr8_1:53984515-53984534 | None:intergenic | 55.0% | |
| GAGGTTGCCACCAAGTATCC+TGG | + | chr8_1:53985139-53985158 | Msa1200900:CDS | 55.0% | |
| GCCCGAGCAGTTTGATGTCA+TGG | + | chr8_1:53985216-53985235 | Msa1200900:CDS | 55.0% | |
| ! | AATACTGCGGCAGGCATTGC+TGG | + | chr8_1:53986587-53986606 | Msa1200900:CDS | 55.0% |
| TGTTCACGTCTCAGCACGAC+TGG | - | chr8_1:53987257-53987276 | None:intergenic | 55.0% | |
| GGTTGTCTGACAGAGGCCTA+TGG | - | chr8_1:53988280-53988299 | None:intergenic | 55.0% | |
| ! | GGTAGGTTGGAGCTGGTTGT+TGG | + | chr8_1:53988382-53988401 | Msa1200900:intron | 55.0% |
| ! | TTTGAGCAGGGTGCTTCAGC+AGG | + | chr8_1:53988537-53988556 | Msa1200900:CDS | 55.0% |
| !! | GATGAGAGAAGAAGCGCCAC+TGG | - | chr8_1:53988606-53988625 | None:intergenic | 55.0% |
| !! | CGGATTGGGATCGGGTTGAG+AGG | - | chr8_1:53983238-53983257 | None:intergenic | 60.0% |
| GATTAGGGTTACGGGACGGG+GGG | - | chr8_1:53983318-53983337 | None:intergenic | 60.0% | |
| GGATTAGGGTTACGGGACGG+GGG | - | chr8_1:53983319-53983338 | None:intergenic | 60.0% | |
| GGGATTAGGGTTACGGGACG+GGG | - | chr8_1:53983320-53983339 | None:intergenic | 60.0% | |
| GGGGATTAGGGTTACGGGAC+GGG | - | chr8_1:53983321-53983340 | None:intergenic | 60.0% | |
| CGGGGATTAGGGTTACGGGA+CGG | - | chr8_1:53983322-53983341 | None:intergenic | 60.0% | |
| CGTCCCGTAACCCTAATCCC+CGG | + | chr8_1:53983320-53983339 | Msa1200900:CDS | 60.0% | |
| TCGCCGGGGATTAGGGTTAC+GGG | - | chr8_1:53983326-53983345 | None:intergenic | 60.0% | |
| GTCGCCGGGGATTAGGGTTA+CGG | - | chr8_1:53983327-53983346 | None:intergenic | 60.0% | |
| GTAACCCTAATCCCCGGCGA+CGG | + | chr8_1:53983326-53983345 | Msa1200900:CDS | 60.0% | |
| TAACCCTAATCCCCGGCGAC+GGG | + | chr8_1:53983327-53983346 | Msa1200900:CDS | 60.0% | |
| CGGCGCCGTTGAGCAACTAA+TGG | + | chr8_1:53983367-53983386 | Msa1200900:CDS | 60.0% | |
| ! | GCTTTTGCGCTGGGGTTACG+GGG | - | chr8_1:53984430-53984449 | None:intergenic | 60.0% |
| CCCCAGCGCAAAAGCTCTTG+AGG | + | chr8_1:53984435-53984454 | Msa1200900:intron | 60.0% | |
| TACATGCACCGTCCCGGCGA+CGG | + | chr8_1:53983290-53983309 | Msa1200900:CDS | 65.0% | |
| GATCCCGTCGCCGGGGATTA+GGG | - | chr8_1:53983333-53983352 | None:intergenic | 65.0% | |
| CTAATCCCCGGCGACGGGAT+CGG | + | chr8_1:53983332-53983351 | Msa1200900:CDS | 65.0% | |
| GGGATCGGCCCACTCGTAAC+CGG | + | chr8_1:53983347-53983366 | Msa1200900:CDS | 65.0% | |
| !! | CAACGGCGCCGGTTACGAGT+GGG | - | chr8_1:53983358-53983377 | None:intergenic | 65.0% |
| !! | TCAACGGCGCCGGTTACGAG+TGG | - | chr8_1:53983359-53983378 | None:intergenic | 65.0% |
| ! | ACTGCGGCAGGCATTGCTGG+AGG | + | chr8_1:53986590-53986609 | Msa1200900:CDS | 65.0% |
| ! | GCAGGCATTGCTGGAGGCAC+TGG | + | chr8_1:53986596-53986615 | Msa1200900:CDS | 65.0% |
| !! | GGAGGCACTGGAGTCATGCC+AGG | + | chr8_1:53986608-53986627 | Msa1200900:CDS | 65.0% |
| ! | GGCACTGGAGTCATGCCAGG+AGG | + | chr8_1:53986611-53986630 | Msa1200900:CDS | 65.0% |
| GTCGCCGGGACGGTGCATGT+AGG | - | chr8_1:53983291-53983310 | None:intergenic | 70.0% | |
| CGATCCCGTCGCCGGGGATT+AGG | - | chr8_1:53983334-53983353 | None:intergenic | 70.0% | |
| AGTGGGCCGATCCCGTCGCC+GGG | - | chr8_1:53983341-53983360 | None:intergenic | 75.0% | |
| GAGTGGGCCGATCCCGTCGC+CGG | - | chr8_1:53983342-53983361 | None:intergenic | 75.0% | |
| ! | GGGGGGTTCCGTCGCCGGGA+CGG | - | chr8_1:53983301-53983320 | None:intergenic | 80.0% |
| ! | GGACGGGGGGTTCCGTCGCC+GGG | - | chr8_1:53983305-53983324 | None:intergenic | 80.0% |
| ! | GGGACGGGGGGTTCCGTCGC+CGG | - | chr8_1:53983306-53983325 | None:intergenic | 80.0% |
| ! | GTGGGCCGATCCCGTCGCCG+GGG | - | chr8_1:53983340-53983359 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 53982987 | 53989066 | 53982987 | ID=Msa1200900;Name=Msa1200900 |
| chr8_1 | mRNA | 53982987 | 53989066 | 53982987 | ID=Msa1200900-mRNA-1;Parent=Msa1200900;Name=Msa1200900-mRNA-1;_AED=0.04;_eAED=0.04;_QI=210|0.2|0.66|0.66|1|1|6|281|416 |
| chr8_1 | exon | 53982987 | 53983718 | 53982987 | ID=Msa1200900-mRNA-1:exon:17273;Parent=Msa1200900-mRNA-1 |
| chr8_1 | exon | 53984226 | 53984303 | 53984226 | ID=Msa1200900-mRNA-1:exon:17274;Parent=Msa1200900-mRNA-1 |
| chr8_1 | exon | 53984998 | 53985237 | 53984998 | ID=Msa1200900-mRNA-1:exon:17275;Parent=Msa1200900-mRNA-1 |
| chr8_1 | exon | 53986554 | 53986632 | 53986554 | ID=Msa1200900-mRNA-1:exon:17276;Parent=Msa1200900-mRNA-1 |
| chr8_1 | exon | 53988326 | 53988382 | 53988326 | ID=Msa1200900-mRNA-1:exon:17277;Parent=Msa1200900-mRNA-1 |
| chr8_1 | exon | 53988511 | 53989066 | 53988511 | ID=Msa1200900-mRNA-1:exon:17278;Parent=Msa1200900-mRNA-1 |
| chr8_1 | five_prime_UTR | 53982987 | 53983196 | 53982987 | ID=Msa1200900-mRNA-1:five_prime_utr;Parent=Msa1200900-mRNA-1 |
| chr8_1 | CDS | 53983197 | 53983718 | 53983197 | ID=Msa1200900-mRNA-1:cds;Parent=Msa1200900-mRNA-1 |
| chr8_1 | CDS | 53984226 | 53984303 | 53984226 | ID=Msa1200900-mRNA-1:cds;Parent=Msa1200900-mRNA-1 |
| chr8_1 | CDS | 53984998 | 53985237 | 53984998 | ID=Msa1200900-mRNA-1:cds;Parent=Msa1200900-mRNA-1 |
| chr8_1 | CDS | 53986554 | 53986632 | 53986554 | ID=Msa1200900-mRNA-1:cds;Parent=Msa1200900-mRNA-1 |
| chr8_1 | CDS | 53988326 | 53988382 | 53988326 | ID=Msa1200900-mRNA-1:cds;Parent=Msa1200900-mRNA-1 |
| chr8_1 | CDS | 53988511 | 53988785 | 53988511 | ID=Msa1200900-mRNA-1:cds;Parent=Msa1200900-mRNA-1 |
| chr8_1 | three_prime_UTR | 53988786 | 53989066 | 53988786 | ID=Msa1200900-mRNA-1:three_prime_utr;Parent=Msa1200900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
