AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255040 MtrunA17_Chr8g0373001 99.272 412 3 0 1 412 1 412 0.0 844
Msa1255040 MtrunA17_Chr5g0404321 73.317 416 107 2 1 412 1 416 0.0 634
Msa1255040 MtrunA17_Chr8g0373361 70.660 409 102 7 1 405 11 405 0.0 549
Msa1255040 MtrunA17_Chr1g0155301 59.259 432 146 7 1 412 1 422 2.04e-175 496
Msa1255040 MtrunA17_Chr8g0373331 59.413 409 97 8 1 403 1 346 1.02e-155 443
Msa1255040 MtrunA17_Chr2g0286441 57.453 369 148 3 46 412 32 393 1.46e-148 427
Msa1255040 MtrunA17_Chr2g0278511 52.326 430 184 8 1 412 1 427 7.68e-147 424
Msa1255040 MtrunA17_Chr1g0201891 51.136 440 178 12 1 412 1 431 1.27e-143 416
Msa1255040 MtrunA17_Chr1g0196071 51.429 420 178 6 1 412 1 402 7.14e-143 412
Msa1255040 MtrunA17_Chr2g0315641 51.944 360 143 2 53 412 42 371 2.47e-126 369
Msa1255040 MtrunA17_Chr8g0373351 52.320 388 71 9 37 409 3 291 8.58e-112 329
Msa1255040 MtrunA17_Chr2g0315651 45.479 376 168 7 41 412 25 367 1.26e-99 301
Msa1255040 MtrunA17_Chr1g0156151 54.673 214 91 2 1 210 1 212 1.85e-71 224
Msa1255040 MtrunA17_Chr8g0373341 59.193 223 47 5 1 205 1 197 1.25e-65 212
Msa1255040 MtrunA17_Chr8g0373341 58.537 123 50 1 281 402 198 320 8.72e-39 142
Msa1255040 MtrunA17_Chr3g0091401 52.475 101 41 2 96 196 9 102 1.91e-26 102
Msa1255040 MtrunA17_Chr2g0334041 27.513 189 114 7 233 411 184 359 5.85e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255040 AT2G18280.2 62.981 416 127 9 1 412 1 393 1.13e-177 501
Msa1255040 AT2G18280.1 62.981 416 127 9 1 412 1 393 1.13e-177 501
Msa1255040 AT2G47900.3 53.365 416 181 6 1 412 1 407 1.96e-149 430
Msa1255040 AT2G47900.2 53.494 415 181 6 1 412 1 406 4.14e-149 429
Msa1255040 AT2G47900.1 53.494 415 181 6 1 412 1 406 4.14e-149 429
Msa1255040 AT1G47270.3 54.545 429 137 11 1 412 1 388 7.58e-149 427
Msa1255040 AT1G47270.2 54.545 429 137 11 1 412 25 412 9.79e-149 428
Msa1255040 AT1G47270.1 54.545 429 137 11 1 412 26 413 1.02e-148 428
Msa1255040 AT1G25280.1 49.889 449 184 9 1 412 1 445 6.19e-142 412
Msa1255040 AT1G76900.2 48.908 458 185 8 1 412 1 455 1.24e-138 404
Msa1255040 AT1G76900.1 48.908 458 185 8 1 412 1 455 1.24e-138 404
Msa1255040 AT1G76900.3 48.908 458 185 8 1 412 1 455 1.24e-138 404
Msa1255040 AT1G43640.1 47.045 440 194 11 1 412 1 429 9.21e-130 380
Msa1255040 AT1G53320.1 51.791 363 145 4 53 412 44 379 7.35e-124 363
Msa1255040 AT3G06380.1 51.507 365 155 7 53 412 33 380 8.98e-123 361
Msa1255040 AT5G18680.1 50.541 370 162 7 49 412 35 389 1.67e-119 353
Msa1255040 AT1G43640.2 48.787 371 159 8 65 412 1 363 4.83e-117 346
Msa1255040 AT3G06380.2 51.163 301 126 6 116 412 5 288 5.38e-98 294
Msa1255040 AT5G18680.2 51.290 310 131 6 108 412 3 297 1.69e-97 293
Msa1255040 AT1G25280.3 51.866 268 101 5 172 412 1 267 5.59e-85 260
Msa1255040 AT1G25280.2 51.866 268 101 5 172 412 1 267 5.59e-85 260
Msa1255040 AT1G61940.2 54.023 87 40 0 56 142 1 87 5.80e-28 111
Msa1255040 AT1G61940.1 54.098 61 28 0 56 116 1 61 2.48e-16 78.6

Find 141 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGAGTTATTTGAATTTA+TGG 0.037907 8_2:-53452975 None:intergenic
TGTGGCCCTTCTTATCTTTC+TGG 0.112808 8_2:-53454542 None:intergenic
ATTACCTGCTTCAATGAAAT+AGG 0.231585 8_2:-53454100 None:intergenic
ATGATGCAGTGCACTCTTCT+TGG 0.233427 8_2:-53454916 None:intergenic
TGTATAAGTTGTATTGATTC+TGG 0.233611 8_2:+53455548 Msa1255040:three_prime_UTR
CTTCACCGCCACCGCGATTC+TGG 0.271168 8_2:-53452914 None:intergenic
TCTACCTCCTGAATTGCTTT+TGG 0.284311 8_2:+53453934 Msa1255040:CDS
TGACCGACATAGCCAATTCT+TGG 0.292823 8_2:-53453849 None:intergenic
ATCTTACAGTTTGGAAAGAT+TGG 0.295811 8_2:+53455282 Msa1255040:CDS
GAGGTAACGATGTTGGGGTT+GGG 0.312924 8_2:-53454981 None:intergenic
TATACCTATCTCAGCTATTC+AGG 0.328559 8_2:+53454945 Msa1255040:CDS
ATCCGATCCAGTGCTTTATT+AGG 0.329707 8_2:+53454233 Msa1255040:CDS
CTTGCACTTGGTCGACGATT+AGG 0.330477 8_2:-53454799 None:intergenic
CTCTCATTCACAAGCAGGTT+TGG 0.347646 8_2:-53455385 None:intergenic
TCCAATTGAACCTATTCAAC+AGG 0.350379 8_2:+53453898 Msa1255040:CDS
ATATTTGAGGTAACGATGTT+GGG 0.363096 8_2:-53454987 None:intergenic
TTTACCAACATATTTGTTGC+TGG 0.366133 8_2:-53454611 None:intergenic
CCAGAGAGCATTTAGCTCAT+AGG 0.369135 8_2:-53454884 None:intergenic
CCCTGTTGAATAGGTTCAAT+TGG 0.369838 8_2:-53453899 None:intergenic
GAAAGGGTAATCTTACAGTT+TGG 0.371540 8_2:+53455273 Msa1255040:CDS
AGGTAACGATGTTGGGGTTG+GGG 0.375686 8_2:-53454980 None:intergenic
ATTATGTCCAAAAGCAATTC+AGG 0.377900 8_2:-53453941 None:intergenic
CTTCGTGTTGTACTTAGGTT+TGG 0.385998 8_2:+53454276 Msa1255040:CDS
CACCGACTTTGTCATATCCT+TGG 0.386843 8_2:+53454567 Msa1255040:CDS
TTTATTATGTTTATTTATGT+TGG 0.389066 8_2:-53452817 None:intergenic
GTGTTGGTGCCTAAACTTCA+TGG 0.395112 8_2:+53455167 Msa1255040:CDS
ATCGAGCCTTGGCTCGGTTC+TGG 0.397446 8_2:-53455093 None:intergenic
CGATTCTGGAGAATCGCGTT+TGG 0.417780 8_2:-53452900 None:intergenic
TGAGGTAACGATGTTGGGGT+TGG 0.418830 8_2:-53454982 None:intergenic
TAACACGACCCATGAAGTTT+AGG 0.421461 8_2:-53455176 None:intergenic
GATTCTGGAGAATCGCGTTT+GGG 0.427715 8_2:-53452899 None:intergenic
CCAGCATGTAACAATCTTGT+TGG 0.440142 8_2:+53454853 Msa1255040:CDS
AACAATAACACTATAGAATA+CGG 0.447248 8_2:-53453064 None:intergenic
TCAAACAGATTGCAAAGGCT+TGG 0.450978 8_2:-53455350 None:intergenic
GTGCTTCGGTATGTAAATCA+TGG 0.451227 8_2:+53454020 Msa1255040:CDS
ACCGACTTTGTCATATCCTT+GGG 0.452958 8_2:+53454568 Msa1255040:CDS
AAAACAACAACAGCACGAGC+AGG 0.453602 8_2:-53453995 None:intergenic
TTTCTTCCGCTGAGCAAGAA+AGG 0.454492 8_2:+53455256 Msa1255040:CDS
CCTTCCTGAATAGCTGAGAT+AGG 0.455053 8_2:-53454949 None:intergenic
ATTTCCTATTTCATTGAAGC+AGG 0.465510 8_2:+53454096 Msa1255040:CDS
GGGGTTCCGACACCAAGAAT+TGG 0.468962 8_2:+53453837 Msa1255040:CDS
TCTACCTTCGTGTTGTACTT+AGG 0.472018 8_2:+53454271 Msa1255040:CDS
AATATTTGAGGTAACGATGT+TGG 0.472032 8_2:-53454988 None:intergenic
AGCATTTAGCTCATAGGAAA+TGG 0.472326 8_2:-53454878 None:intergenic
GCCCACTGTCCCTGTTGAAT+AGG 0.474061 8_2:-53453908 None:intergenic
AGTGCTGGTGAGGGAGGAAA+AGG 0.475950 8_2:-53455018 None:intergenic
CCAGAGTACGAATCTGTCAT+TGG 0.478687 8_2:-53455054 None:intergenic
AAAGGTTCACTGAATATTTG+AGG 0.481469 8_2:-53455000 None:intergenic
TTGAAGAGAGTGAGACATCT+TGG 0.483464 8_2:+53453972 Msa1255040:CDS
TTGTTGCATATTAAAATGCT+AGG 0.483851 8_2:+53455443 Msa1255040:three_prime_UTR
GTTGTCATATATAGCAAACT+TGG 0.484168 8_2:-53454749 None:intergenic
CGATCCAGTGCTTTATTAGG+AGG 0.490560 8_2:+53454236 Msa1255040:CDS
CTAAATGCTCTCTGGACAAG+AGG 0.490562 8_2:+53454892 Msa1255040:CDS
CCAAGGCTCGATGGACTCCT+TGG 0.492424 8_2:+53455104 Msa1255040:CDS
CCTATGAGCTAAATGCTCTC+TGG 0.493546 8_2:+53454884 Msa1255040:CDS
CACAGCTCTCATTCACAAGC+AGG 0.495782 8_2:-53455390 None:intergenic
GGTTCAATTGGAGTTACATC+CGG 0.496479 8_2:-53453887 None:intergenic
TTAATATGCAACAAATCAGC+AGG 0.497220 8_2:-53455434 None:intergenic
GTCAAAGTCACATGTTGCTC+CGG 0.499201 8_2:+53453868 Msa1255040:CDS
TTGTTACATGCTGGAACTCT+TGG 0.500747 8_2:-53454844 None:intergenic
TCGGTTCTGGTAGCTCTGAT+AGG 0.502232 8_2:-53455080 None:intergenic
AAGCATAGTCCGCGAACTCA+AGG 0.507358 8_2:+53453781 Msa1255040:CDS
TTGGATTGGTGGAGTTTGCA+AGG 0.512498 8_2:+53453738 Msa1255040:five_prime_UTR
ACAGATTGCAAAGGCTTGGA+AGG 0.518500 8_2:-53455346 None:intergenic
CACCGAGCACTTCAGCATGC+AGG 0.520072 8_2:+53455488 Msa1255040:three_prime_UTR
CACCTGCATGCTGAAGTGCT+CGG 0.521417 8_2:-53455490 None:intergenic
GATCGGATAATCACGAGGAC+CGG 0.524270 8_2:-53454218 None:intergenic
TGCAAGACTTAATTCTAAGC+AGG 0.525564 8_2:+53454816 Msa1255040:CDS
AATAGGTAGCATATCAAAGC+GGG 0.526116 8_2:+53453817 Msa1255040:CDS
GAATCAATACAACTTATACA+TGG 0.527559 8_2:-53455545 None:intergenic
ATTCTCCAGAATCGCGGTGG+CGG 0.530765 8_2:+53452909 Msa1255040:five_prime_UTR
TTCTTCCGCTGAGCAAGAAA+GGG 0.530855 8_2:+53455257 Msa1255040:CDS
AATCAATACAACTTATACAT+GGG 0.535938 8_2:-53455544 None:intergenic
TTGGTGGAGTTTGCAAGGTG+TGG 0.536602 8_2:+53453743 Msa1255040:five_prime_UTR
CCTATCTCAGCTATTCAGGA+AGG 0.539583 8_2:+53454949 Msa1255040:CDS
CCAAGGAGTCCATCGAGCCT+TGG 0.540676 8_2:-53455104 None:intergenic
TGTTCCTCCTAATAAAGCAC+TGG 0.546307 8_2:-53454240 None:intergenic
ATCGGATAATCACGAGGACC+GGG 0.546623 8_2:-53454217 None:intergenic
TCTTTCAGTGCTGGTGAGGG+AGG 0.551006 8_2:-53455024 None:intergenic
CCAATGACAGATTCGTACTC+TGG 0.552500 8_2:+53455054 Msa1255040:CDS
TAGCCGCCAGAAAGATAAGA+AGG 0.555283 8_2:+53454536 Msa1255040:CDS
CCAACAAGATTGTTACATGC+TGG 0.555601 8_2:-53454853 None:intergenic
TGAAGTTTAGGCACCAACAC+TGG 0.557707 8_2:-53455164 None:intergenic
AGCATAGTCCGCGAACTCAA+GGG 0.558850 8_2:+53453782 Msa1255040:CDS
CACGAGCAAGAAGAAGAAGA+AGG 0.559457 8_2:-53453011 None:intergenic
CTTGATAATCTCTTTAGTAA+CGG 0.564764 8_2:-53454047 None:intergenic
CTATCTCAGCTATTCAGGAA+GGG 0.566111 8_2:+53454950 Msa1255040:CDS
CGAGCCAGCAACAAATATGT+TGG 0.568606 8_2:+53454607 Msa1255040:CDS
ACCTATTCAACAGGGACAGT+GGG 0.571704 8_2:+53453907 Msa1255040:CDS
GAGTCCATCGAGCCTTGGCT+CGG 0.572639 8_2:-53455099 None:intergenic
TATCTCAGCTATTCAGGAAG+GGG 0.574086 8_2:+53454951 Msa1255040:CDS
TGTTGGTGCCTAAACTTCAT+GGG 0.575598 8_2:+53455168 Msa1255040:CDS
CTCCTAATAAAGCACTGGAT+CGG 0.579253 8_2:-53454235 None:intergenic
TGGAGCTGCTCATGCCACCT+AGG 0.585203 8_2:-53455144 None:intergenic
GGCATGAGCAGCTCCAGTGT+TGG 0.585590 8_2:+53455151 Msa1255040:CDS
GGCCCTTCTTATCTTTCTGG+CGG 0.587954 8_2:-53454539 None:intergenic
GGTTGAACTGCAGCGTCATG+TGG 0.590130 8_2:-53454778 None:intergenic
AGAAAGATAAGAAGGGCCAC+AGG 0.590973 8_2:+53454544 Msa1255040:CDS
CTGCAGCGTCATGTGGAGGT+TGG 0.594900 8_2:-53454771 None:intergenic
AGAACCGAGCCAAGGCTCGA+TGG 0.600159 8_2:+53455095 Msa1255040:CDS
ACACCAAGAATTGGCTATGT+CGG 0.600503 8_2:+53453846 Msa1255040:CDS
GCATAGTCCGCGAACTCAAG+GGG 0.603504 8_2:+53453783 Msa1255040:CDS
AAGGCTTGGAAGGCAGAGAG+TGG 0.610317 8_2:-53455336 None:intergenic
GAGTGGGTAAGAGTAGTCCA+TGG 0.613248 8_2:-53455319 None:intergenic
ACAAATATGTTGGTAAACTG+AGG 0.614123 8_2:+53454617 Msa1255040:CDS
TTAGAATTAAGTCTTGCACT+TGG 0.614308 8_2:-53454811 None:intergenic
TATGACAAAGTCGGTGCCTG+TGG 0.616367 8_2:-53454560 None:intergenic
TAAATGCTCTCTGGACAAGA+GGG 0.617345 8_2:+53454893 Msa1255040:CDS
AGACTCCTCAGCAATGCGGA+AGG 0.618284 8_2:+53454068 Msa1255040:CDS
TATTTGAGGTAACGATGTTG+GGG 0.620267 8_2:-53454986 None:intergenic
GCTTGTCAAACAGATTGCAA+AGG 0.620286 8_2:-53455355 None:intergenic
AAAGTAAGAAGAACGAGAAG+TGG 0.622647 8_2:-53452950 None:intergenic
CTTCATGGGTCGTGTTACAG+TGG 0.629354 8_2:+53455182 Msa1255040:CDS
ACATAGCCAATTCTTGGTGT+CGG 0.630203 8_2:-53453843 None:intergenic
AACCTATTCAACAGGGACAG+TGG 0.631854 8_2:+53453906 Msa1255040:CDS
TCTCACTCTCTTCAACCCTA+CGG 0.632526 8_2:-53453964 None:intergenic
GTGATCCTTCCGCATTGCTG+AGG 0.633651 8_2:-53454073 None:intergenic
AAGTAAGAAGAACGAGAAGT+GGG 0.636222 8_2:-53452949 None:intergenic
ATCAATACAACTTATACATG+GGG 0.637552 8_2:-53455543 None:intergenic
GAGCTACCAGAACCGAGCCA+AGG 0.641949 8_2:+53455087 Msa1255040:CDS
GCGGAAGAAACATTATGAGA+CGG 0.646089 8_2:-53455243 None:intergenic
TGGAAAAGATATATTCACCA+TGG 0.647072 8_2:+53455302 Msa1255040:CDS
GCCCAAGGATATGACAAAGT+CGG 0.650298 8_2:-53454569 None:intergenic
AGGCTTGGAAGGCAGAGAGT+GGG 0.650720 8_2:-53455335 None:intergenic
CCAATTGAACCTATTCAACA+GGG 0.658968 8_2:+53453899 Msa1255040:CDS
AGCCGCCAGAAAGATAAGAA+GGG 0.660186 8_2:+53454537 Msa1255040:CDS
ATCTCAGCTATTCAGGAAGG+GGG 0.669799 8_2:+53454952 Msa1255040:CDS
CACTGGATCGGATAATCACG+AGG 0.678479 8_2:-53454223 None:intergenic
AATCACAAACACTGACACGA+CGG 0.686356 8_2:+53452755 Msa1255040:five_prime_UTR
TGAACTGCAGCGTCATGTGG+AGG 0.688082 8_2:-53454775 None:intergenic
GATTACCCTTTCTTGCTCAG+CGG 0.690765 8_2:-53455262 None:intergenic
ATGTCCAAAAGCAATTCAGG+AGG 0.691534 8_2:-53453938 None:intergenic
AACGCGATTCTCCAGAATCG+CGG 0.692412 8_2:+53452903 Msa1255040:five_prime_UTR
ATCAAGACTCCTCAGCAATG+CGG 0.693306 8_2:+53454064 Msa1255040:CDS
AAATGCTAGGCATATCCGCA+CGG 0.696473 8_2:+53455456 Msa1255040:three_prime_UTR
GATCAAAAGCTTCATCAGTG+AGG 0.715213 8_2:-53455666 None:intergenic
CTTCGGTATGTAAATCATGG+AGG 0.716243 8_2:+53454023 Msa1255040:CDS
GAATAGGTAGCATATCAAAG+CGG 0.721866 8_2:+53453816 Msa1255040:CDS
ATAGGTAGCATATCAAAGCG+GGG 0.729686 8_2:+53453818 Msa1255040:CDS
CAAACCTAAGTACAACACGA+AGG 0.754352 8_2:-53454275 None:intergenic
TCGGTGCTTGACGAACCGTG+CGG 0.787880 8_2:-53455471 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTATGTTTATTTATGT+TGG - chr8_2:53452820-53452839 None:intergenic 10.0%
!! ATTTAATATTTATTCATCAA+TGG - chr8_2:53453457-53453476 None:intergenic 10.0%
!!! ATTTTTATGTTAGTTTTAGA+TGG + chr8_2:53453221-53453240 Msa1255040:intron 15.0%
!! AATATAATCAAGGTTTATTA+TGG - chr8_2:53453348-53453367 None:intergenic 15.0%
!! ATAAGTAATGAATATAATCA+AGG - chr8_2:53453358-53453377 None:intergenic 15.0%
!! AATTTGGATTATACTAAAAA+GGG - chr8_2:53454137-53454156 None:intergenic 15.0%
!! TAATTTGGATTATACTAAAA+AGG - chr8_2:53454138-53454157 None:intergenic 15.0%
!! ATACAAAATAGAAAAAATGT+CGG - chr8_2:53454435-53454454 None:intergenic 15.0%
!! CTAAGAAGAAAAAACTAAAT+CGG - chr8_2:53453042-53453061 None:intergenic 20.0%
!! AACAATAACACTATAGAATA+CGG - chr8_2:53453067-53453086 None:intergenic 20.0%
!!! TGTTCAATTTCAGATTTTTA+TGG + chr8_2:53453127-53453146 Msa1255040:intron 20.0%
!!! ATTTCACGTTTTTTCTTTTT+TGG + chr8_2:53453152-53453171 Msa1255040:intron 20.0%
!!! TTTCACGTTTTTTCTTTTTT+GGG + chr8_2:53453153-53453172 Msa1255040:intron 20.0%
!!! TAATTGTAGTTGAATTTTGA+TGG + chr8_2:53453383-53453402 Msa1255040:intron 20.0%
!! TCAAAATTCAATCTTTGATT+TGG - chr8_2:53453423-53453442 None:intergenic 20.0%
!! ATTTGGATTATACTAAAAAG+GGG - chr8_2:53454136-53454155 None:intergenic 20.0%
!! AGTATAATCCAAATTATTCT+TGG + chr8_2:53454142-53454161 Msa1255040:intron 20.0%
!! AATCAATACAACTTATACAT+GGG - chr8_2:53455547-53455566 None:intergenic 20.0%
! GAGAGAGTTATTTGAATTTA+TGG - chr8_2:53452978-53452997 None:intergenic 25.0%
! TAACCTGAATGAAGAAAAAA+TGG - chr8_2:53453099-53453118 None:intergenic 25.0%
!! AAATCTGAAATTGAACAGAA+GGG - chr8_2:53453124-53453143 None:intergenic 25.0%
!! AAAATCTGAAATTGAACAGA+AGG - chr8_2:53453125-53453144 None:intergenic 25.0%
!!! TTCACGTTTTTTCTTTTTTG+GGG + chr8_2:53453154-53453173 Msa1255040:intron 25.0%
!!! TTGCAGCATTTTAATTTTGT+AGG + chr8_2:53453311-53453330 Msa1255040:intron 25.0%
!! CTTGATAATCTCTTTAGTAA+CGG - chr8_2:53454050-53454069 None:intergenic 25.0%
!! AAGAAGCATAAAAAACCTAA+GGG - chr8_2:53454168-53454187 None:intergenic 25.0%
!! TAAGAAGCATAAAAAACCTA+AGG - chr8_2:53454169-53454188 None:intergenic 25.0%
! CTTAAAGATGATAACTTACA+TGG - chr8_2:53454304-53454323 None:intergenic 25.0%
! AAAACATGTTGAGATTACAA+GGG - chr8_2:53454697-53454716 None:intergenic 25.0%
! AAAAACATGTTGAGATTACA+AGG - chr8_2:53454698-53454717 None:intergenic 25.0%
!!! CAACATGTTTTTTATACGTT+TGG + chr8_2:53454706-53454725 Msa1255040:intron 25.0%
! TTGTTGCATATTAAAATGCT+AGG + chr8_2:53455443-53455462 Msa1255040:three_prime_UTR 25.0%
! ATCAATACAACTTATACATG+GGG - chr8_2:53455546-53455565 None:intergenic 25.0%
! GAATCAATACAACTTATACA+TGG - chr8_2:53455548-53455567 None:intergenic 25.0%
!!! TGTATAAGTTGTATTGATTC+TGG + chr8_2:53455548-53455567 Msa1255040:three_prime_UTR 25.0%
!!! GATCCATTTTTTCTTCATTC+AGG + chr8_2:53453093-53453112 Msa1255040:five_prime_UTR 30.0%
! AATCTGAAATTGAACAGAAG+GGG - chr8_2:53453123-53453142 None:intergenic 30.0%
ATCAAGGTTTATTATGGTCA+AGG - chr8_2:53453342-53453361 None:intergenic 30.0%
!! CATGCAATGCATTTGTTATA+AGG + chr8_2:53453625-53453644 Msa1255040:intron 30.0%
!! ATTTGTTATAAGGAGCTACA+TGG + chr8_2:53453635-53453654 Msa1255040:intron 30.0%
GCTACATGGTTATATTTGTT+TGG + chr8_2:53453649-53453668 Msa1255040:intron 30.0%
!! TTTGCCTTTGTGTTTTTGTT+AGG + chr8_2:53453692-53453711 Msa1255040:intron 30.0%
TGATCCTAACAAAAACACAA+AGG - chr8_2:53453699-53453718 None:intergenic 30.0%
! TAAAGCTAGAAGCTTTTGTT+TGG + chr8_2:53453719-53453738 Msa1255040:five_prime_UTR 30.0%
ATTATGTCCAAAAGCAATTC+AGG - chr8_2:53453944-53453963 None:intergenic 30.0%
!!! TGTTGTTGTTTTTTGTGCTT+CGG + chr8_2:53454006-53454025 Msa1255040:CDS 30.0%
ATTTCCTATTTCATTGAAGC+AGG + chr8_2:53454096-53454115 Msa1255040:CDS 30.0%
ATTACCTGCTTCAATGAAAT+AGG - chr8_2:53454103-53454122 None:intergenic 30.0%
GAAATTCAACATTCATAGTC+AGG - chr8_2:53454344-53454363 None:intergenic 30.0%
ATTTATTGCGATTTAGACTG+TGG + chr8_2:53454396-53454415 Msa1255040:intron 30.0%
!! GCATTTAAGTGATCTTGTTT+TGG + chr8_2:53454467-53454486 Msa1255040:intron 30.0%
!!! TTGTTTTGGTTTTGTCGTAA+CGG + chr8_2:53454481-53454500 Msa1255040:intron 30.0%
! TTTACCAACATATTTGTTGC+TGG - chr8_2:53454614-53454633 None:intergenic 30.0%
! ACAAATATGTTGGTAAACTG+AGG + chr8_2:53454617-53454636 Msa1255040:CDS 30.0%
AGGATGAAAAGCTGATATAA+GGG - chr8_2:53454672-53454691 None:intergenic 30.0%
TAGGATGAAAAGCTGATATA+AGG - chr8_2:53454673-53454692 None:intergenic 30.0%
AAACATGTTGAGATTACAAG+GGG - chr8_2:53454696-53454715 None:intergenic 30.0%
!!! ATGTTTTTTATACGTTTGGC+AGG + chr8_2:53454710-53454729 Msa1255040:intron 30.0%
GTTGTCATATATAGCAAACT+TGG - chr8_2:53454752-53454771 None:intergenic 30.0%
TTAGAATTAAGTCTTGCACT+TGG - chr8_2:53454814-53454833 None:intergenic 30.0%
! ATATTTGAGGTAACGATGTT+GGG - chr8_2:53454990-53455009 None:intergenic 30.0%
! AATATTTGAGGTAACGATGT+TGG - chr8_2:53454991-53455010 None:intergenic 30.0%
AAAGGTTCACTGAATATTTG+AGG - chr8_2:53455003-53455022 None:intergenic 30.0%
!!! AGACTTGTTTTTAAGTACCA+AGG - chr8_2:53455124-53455143 None:intergenic 30.0%
TACTTAAAAACAAGTCTCCT+AGG + chr8_2:53455127-53455146 Msa1255040:CDS 30.0%
ATCTTACAGTTTGGAAAGAT+TGG + chr8_2:53455282-53455301 Msa1255040:CDS 30.0%
TGGAAAAGATATATTCACCA+TGG + chr8_2:53455302-53455321 Msa1255040:CDS 30.0%
TTAATATGCAACAAATCAGC+AGG - chr8_2:53455437-53455456 None:intergenic 30.0%
!!! CATAATTTCATTTTAGCTGC+AGG - chr8_2:53455601-53455620 None:intergenic 30.0%
AAGTAAGAAGAACGAGAAGT+GGG - chr8_2:53452952-53452971 None:intergenic 35.0%
AAAGTAAGAAGAACGAGAAG+TGG - chr8_2:53452953-53452972 None:intergenic 35.0%
AAGTGAGTTGCTCAATTTAG+AGG + chr8_2:53453501-53453520 Msa1255040:intron 35.0%
GTTGCTCAATTTAGAGGATT+CGG + chr8_2:53453507-53453526 Msa1255040:intron 35.0%
! AGAGGATTCGGATCTAATTT+TGG + chr8_2:53453519-53453538 Msa1255040:intron 35.0%
! GAGGATTCGGATCTAATTTT+GGG + chr8_2:53453520-53453539 Msa1255040:intron 35.0%
!! CTAGAAGCTTTTGTTTGGAT+TGG + chr8_2:53453724-53453743 Msa1255040:five_prime_UTR 35.0%
AAGGGGATGAAAAATGGAAT+AGG + chr8_2:53453800-53453819 Msa1255040:CDS 35.0%
GAATAGGTAGCATATCAAAG+CGG + chr8_2:53453816-53453835 Msa1255040:CDS 35.0%
AATAGGTAGCATATCAAAGC+GGG + chr8_2:53453817-53453836 Msa1255040:CDS 35.0%
TCCAATTGAACCTATTCAAC+AGG + chr8_2:53453898-53453917 Msa1255040:CDS 35.0%
CCAATTGAACCTATTCAACA+GGG + chr8_2:53453899-53453918 Msa1255040:CDS 35.0%
! GTTTGGCAGGTCTAATTTTT+GGG + chr8_2:53454723-53454742 Msa1255040:intron 35.0%
! TTTGGCAGGTCTAATTTTTG+GGG + chr8_2:53454724-53454743 Msa1255040:intron 35.0%
TGCAAGACTTAATTCTAAGC+AGG + chr8_2:53454816-53454835 Msa1255040:CDS 35.0%
! AGCATTTAGCTCATAGGAAA+TGG - chr8_2:53454881-53454900 None:intergenic 35.0%
TATACCTATCTCAGCTATTC+AGG + chr8_2:53454945-53454964 Msa1255040:CDS 35.0%
! TATTTGAGGTAACGATGTTG+GGG - chr8_2:53454989-53455008 None:intergenic 35.0%
TTAAAAACAAGTCTCCTAGG+TGG + chr8_2:53455130-53455149 Msa1255040:CDS 35.0%
GAAAGGGTAATCTTACAGTT+TGG + chr8_2:53455273-53455292 Msa1255040:CDS 35.0%
AATCACAAACACTGACACGA+CGG + chr8_2:53452755-53452774 Msa1255040:five_prime_UTR 40.0%
!! TCTGCTTTTGAACTCAAACG+TGG - chr8_2:53452781-53452800 None:intergenic 40.0%
! ATTCGGATCTAATTTTGGGC+TGG + chr8_2:53453524-53453543 Msa1255040:intron 40.0%
!! GAAGCTTTTGTTTGGATTGG+TGG + chr8_2:53453727-53453746 Msa1255040:five_prime_UTR 40.0%
GAACTCAAGGGGATGAAAAA+TGG + chr8_2:53453794-53453813 Msa1255040:CDS 40.0%
ATAGGTAGCATATCAAAGCG+GGG + chr8_2:53453818-53453837 Msa1255040:CDS 40.0%
! ACATAGCCAATTCTTGGTGT+CGG - chr8_2:53453846-53453865 None:intergenic 40.0%
ACACCAAGAATTGGCTATGT+CGG + chr8_2:53453846-53453865 Msa1255040:CDS 40.0%
GGTTCAATTGGAGTTACATC+CGG - chr8_2:53453890-53453909 None:intergenic 40.0%
CCCTGTTGAATAGGTTCAAT+TGG - chr8_2:53453902-53453921 None:intergenic 40.0%
! TCTACCTCCTGAATTGCTTT+TGG + chr8_2:53453934-53453953 Msa1255040:CDS 40.0%
ATGTCCAAAAGCAATTCAGG+AGG - chr8_2:53453941-53453960 None:intergenic 40.0%
! TGCTTTTGGACATAATCCGT+AGG + chr8_2:53453948-53453967 Msa1255040:CDS 40.0%
! GCTTTTGGACATAATCCGTA+GGG + chr8_2:53453949-53453968 Msa1255040:CDS 40.0%
TTGAAGAGAGTGAGACATCT+TGG + chr8_2:53453972-53453991 Msa1255040:CDS 40.0%
GTGCTTCGGTATGTAAATCA+TGG + chr8_2:53454020-53454039 Msa1255040:CDS 40.0%
CTTCGGTATGTAAATCATGG+AGG + chr8_2:53454023-53454042 Msa1255040:CDS 40.0%
CCTAAGGGCCAAGAATAATT+TGG - chr8_2:53454153-53454172 None:intergenic 40.0%
CCAAATTATTCTTGGCCCTT+AGG + chr8_2:53454150-53454169 Msa1255040:intron 40.0%
CCTTATGTGTATGAATAGCC+CGG + chr8_2:53454199-53454218 Msa1255040:intron 40.0%
! ATCCGATCCAGTGCTTTATT+AGG + chr8_2:53454233-53454252 Msa1255040:CDS 40.0%
!! CTCCTAATAAAGCACTGGAT+CGG - chr8_2:53454238-53454257 None:intergenic 40.0%
TGTTCCTCCTAATAAAGCAC+TGG - chr8_2:53454243-53454262 None:intergenic 40.0%
TCTACCTTCGTGTTGTACTT+AGG + chr8_2:53454271-53454290 Msa1255040:CDS 40.0%
CAAACCTAAGTACAACACGA+AGG - chr8_2:53454278-53454297 None:intergenic 40.0%
CTTCGTGTTGTACTTAGGTT+TGG + chr8_2:53454276-53454295 Msa1255040:CDS 40.0%
! GTTTTGTCGTAACGGTATAG+CGG + chr8_2:53454489-53454508 Msa1255040:intron 40.0%
! ACCGACTTTGTCATATCCTT+GGG + chr8_2:53454568-53454587 Msa1255040:CDS 40.0%
AGAAAAATCATCTGTGCCCA+AGG - chr8_2:53454587-53454606 None:intergenic 40.0%
! TGGTAAACTGAGGCAAGTTT+TGG + chr8_2:53454627-53454646 Msa1255040:intron 40.0%
ATGTTGAGATTACAAGGGGT+AGG - chr8_2:53454692-53454711 None:intergenic 40.0%
! CGTTTGGCAGGTCTAATTTT+TGG + chr8_2:53454722-53454741 Msa1255040:intron 40.0%
TTGTTACATGCTGGAACTCT+TGG - chr8_2:53454847-53454866 None:intergenic 40.0%
CCAACAAGATTGTTACATGC+TGG - chr8_2:53454856-53454875 None:intergenic 40.0%
CCAGCATGTAACAATCTTGT+TGG + chr8_2:53454853-53454872 Msa1255040:CDS 40.0%
TAAATGCTCTCTGGACAAGA+GGG + chr8_2:53454893-53454912 Msa1255040:CDS 40.0%
CTATCTCAGCTATTCAGGAA+GGG + chr8_2:53454950-53454969 Msa1255040:CDS 40.0%
TATCTCAGCTATTCAGGAAG+GGG + chr8_2:53454951-53454970 Msa1255040:CDS 40.0%
!!! TTTTCTTTCAGTGCTGGTGA+GGG - chr8_2:53455030-53455049 None:intergenic 40.0%
!!! TTTTTCTTTCAGTGCTGGTG+AGG - chr8_2:53455031-53455050 None:intergenic 40.0%
!!! GGACTTTTTTCTTTCAGTGC+TGG - chr8_2:53455036-53455055 None:intergenic 40.0%
! TGTTGGTGCCTAAACTTCAT+GGG + chr8_2:53455168-53455187 Msa1255040:CDS 40.0%
TAACACGACCCATGAAGTTT+AGG - chr8_2:53455179-53455198 None:intergenic 40.0%
GCGGAAGAAACATTATGAGA+CGG - chr8_2:53455246-53455265 None:intergenic 40.0%
TCAAACAGATTGCAAAGGCT+TGG - chr8_2:53455353-53455372 None:intergenic 40.0%
GCTTGTCAAACAGATTGCAA+AGG - chr8_2:53455358-53455377 None:intergenic 40.0%
GATCAAAAGCTTCATCAGTG+AGG - chr8_2:53455669-53455688 None:intergenic 40.0%
! GATTCTGGAGAATCGCGTTT+GGG - chr8_2:53452902-53452921 None:intergenic 45.0%
CACGAGCAAGAAGAAGAAGA+AGG - chr8_2:53453014-53453033 None:intergenic 45.0%
!! TTGGATTGGTGGAGTTTGCA+AGG + chr8_2:53453738-53453757 Msa1255040:five_prime_UTR 45.0%
! TTTTCATCCCCTTGAGTTCG+CGG - chr8_2:53453793-53453812 None:intergenic 45.0%
TGACCGACATAGCCAATTCT+TGG - chr8_2:53453852-53453871 None:intergenic 45.0%
GTCAAAGTCACATGTTGCTC+CGG + chr8_2:53453868-53453887 Msa1255040:CDS 45.0%
AACCTATTCAACAGGGACAG+TGG + chr8_2:53453906-53453925 Msa1255040:CDS 45.0%
ACCTATTCAACAGGGACAGT+GGG + chr8_2:53453907-53453926 Msa1255040:CDS 45.0%
TCTCACTCTCTTCAACCCTA+CGG - chr8_2:53453967-53453986 None:intergenic 45.0%
AAAACAACAACAGCACGAGC+AGG - chr8_2:53453998-53454017 None:intergenic 45.0%
ATCAAGACTCCTCAGCAATG+CGG + chr8_2:53454064-53454083 Msa1255040:CDS 45.0%
CCGGGCTATTCATACACATA+AGG - chr8_2:53454202-53454221 None:intergenic 45.0%
! CGATCCAGTGCTTTATTAGG+AGG + chr8_2:53454236-53454255 Msa1255040:CDS 45.0%
TAGCCGCCAGAAAGATAAGA+AGG + chr8_2:53454536-53454555 Msa1255040:CDS 45.0%
AGCCGCCAGAAAGATAAGAA+GGG + chr8_2:53454537-53454556 Msa1255040:CDS 45.0%
TGTGGCCCTTCTTATCTTTC+TGG - chr8_2:53454545-53454564 None:intergenic 45.0%
AGAAAGATAAGAAGGGCCAC+AGG + chr8_2:53454544-53454563 Msa1255040:CDS 45.0%
!! CACCGACTTTGTCATATCCT+TGG + chr8_2:53454567-53454586 Msa1255040:CDS 45.0%
GCCCAAGGATATGACAAAGT+CGG - chr8_2:53454572-53454591 None:intergenic 45.0%
CGAGCCAGCAACAAATATGT+TGG + chr8_2:53454607-53454626 Msa1255040:CDS 45.0%
!! CCAGAGAGCATTTAGCTCAT+AGG - chr8_2:53454887-53454906 None:intergenic 45.0%
CCTATGAGCTAAATGCTCTC+TGG + chr8_2:53454884-53454903 Msa1255040:CDS 45.0%
CTAAATGCTCTCTGGACAAG+AGG + chr8_2:53454892-53454911 Msa1255040:CDS 45.0%
ATGATGCAGTGCACTCTTCT+TGG - chr8_2:53454919-53454938 None:intergenic 45.0%
CCTTCCTGAATAGCTGAGAT+AGG - chr8_2:53454952-53454971 None:intergenic 45.0%
CCTATCTCAGCTATTCAGGA+AGG + chr8_2:53454949-53454968 Msa1255040:CDS 45.0%
ATCTCAGCTATTCAGGAAGG+GGG + chr8_2:53454952-53454971 Msa1255040:CDS 45.0%
CCAGAGTACGAATCTGTCAT+TGG - chr8_2:53455057-53455076 None:intergenic 45.0%
CCAATGACAGATTCGTACTC+TGG + chr8_2:53455054-53455073 Msa1255040:CDS 45.0%
TGAAGTTTAGGCACCAACAC+TGG - chr8_2:53455167-53455186 None:intergenic 45.0%
! GTGTTGGTGCCTAAACTTCA+TGG + chr8_2:53455167-53455186 Msa1255040:CDS 45.0%
TTTCTTCCGCTGAGCAAGAA+AGG + chr8_2:53455256-53455275 Msa1255040:CDS 45.0%
TTCTTCCGCTGAGCAAGAAA+GGG + chr8_2:53455257-53455276 Msa1255040:CDS 45.0%
GATTACCCTTTCTTGCTCAG+CGG - chr8_2:53455265-53455284 None:intergenic 45.0%
ACAGATTGCAAAGGCTTGGA+AGG - chr8_2:53455349-53455368 None:intergenic 45.0%
CTCTCATTCACAAGCAGGTT+TGG - chr8_2:53455388-53455407 None:intergenic 45.0%
AAATGCTAGGCATATCCGCA+CGG + chr8_2:53455456-53455475 Msa1255040:three_prime_UTR 45.0%
! CGATTCTGGAGAATCGCGTT+TGG - chr8_2:53452903-53452922 None:intergenic 50.0%
AACGCGATTCTCCAGAATCG+CGG + chr8_2:53452903-53452922 Msa1255040:five_prime_UTR 50.0%
TTGGTGGAGTTTGCAAGGTG+TGG + chr8_2:53453743-53453762 Msa1255040:five_prime_UTR 50.0%
AAGCATAGTCCGCGAACTCA+AGG + chr8_2:53453781-53453800 Msa1255040:CDS 50.0%
AGCATAGTCCGCGAACTCAA+GGG + chr8_2:53453782-53453801 Msa1255040:CDS 50.0%
ATCGGATAATCACGAGGACC+GGG - chr8_2:53454220-53454239 None:intergenic 50.0%
GATCGGATAATCACGAGGAC+CGG - chr8_2:53454221-53454240 None:intergenic 50.0%
CACTGGATCGGATAATCACG+AGG - chr8_2:53454226-53454245 None:intergenic 50.0%
GGCCCTTCTTATCTTTCTGG+CGG - chr8_2:53454542-53454561 None:intergenic 50.0%
! TATGACAAAGTCGGTGCCTG+TGG - chr8_2:53454563-53454582 None:intergenic 50.0%
CTTGCACTTGGTCGACGATT+AGG - chr8_2:53454802-53454821 None:intergenic 50.0%
AGGTAACGATGTTGGGGTTG+GGG - chr8_2:53454983-53455002 None:intergenic 50.0%
GAGGTAACGATGTTGGGGTT+GGG - chr8_2:53454984-53455003 None:intergenic 50.0%
TGAGGTAACGATGTTGGGGT+TGG - chr8_2:53454985-53455004 None:intergenic 50.0%
!! TCGGTTCTGGTAGCTCTGAT+AGG - chr8_2:53455083-53455102 None:intergenic 50.0%
CTTCATGGGTCGTGTTACAG+TGG + chr8_2:53455182-53455201 Msa1255040:CDS 50.0%
GAGTGGGTAAGAGTAGTCCA+TGG - chr8_2:53455322-53455341 None:intergenic 50.0%
CACAGCTCTCATTCACAAGC+AGG - chr8_2:53455393-53455412 None:intergenic 50.0%
ATTCTCCAGAATCGCGGTGG+CGG + chr8_2:53452909-53452928 Msa1255040:five_prime_UTR 55.0%
GCATAGTCCGCGAACTCAAG+GGG + chr8_2:53453783-53453802 Msa1255040:CDS 55.0%
GGGGTTCCGACACCAAGAAT+TGG + chr8_2:53453837-53453856 Msa1255040:CDS 55.0%
GCCCACTGTCCCTGTTGAAT+AGG - chr8_2:53453911-53453930 None:intergenic 55.0%
AGACTCCTCAGCAATGCGGA+AGG + chr8_2:53454068-53454087 Msa1255040:CDS 55.0%
GTGATCCTTCCGCATTGCTG+AGG - chr8_2:53454076-53454095 None:intergenic 55.0%
TGAACTGCAGCGTCATGTGG+AGG - chr8_2:53454778-53454797 None:intergenic 55.0%
GGTTGAACTGCAGCGTCATG+TGG - chr8_2:53454781-53454800 None:intergenic 55.0%
!! AGTGCTGGTGAGGGAGGAAA+AGG - chr8_2:53455021-53455040 None:intergenic 55.0%
!! TCTTTCAGTGCTGGTGAGGG+AGG - chr8_2:53455027-53455046 None:intergenic 55.0%
AGGCTTGGAAGGCAGAGAGT+GGG - chr8_2:53455338-53455357 None:intergenic 55.0%
AAGGCTTGGAAGGCAGAGAG+TGG - chr8_2:53455339-53455358 None:intergenic 55.0%
! CACCTGCATGCTGAAGTGCT+CGG - chr8_2:53455493-53455512 None:intergenic 55.0%
GCGATTCTCCAGAATCGCGG+TGG + chr8_2:53452906-53452925 Msa1255040:five_prime_UTR 60.0%
CTGCAGCGTCATGTGGAGGT+TGG - chr8_2:53454774-53454793 None:intergenic 60.0%
GAGCTACCAGAACCGAGCCA+AGG + chr8_2:53455087-53455106 Msa1255040:CDS 60.0%
!! ATCGAGCCTTGGCTCGGTTC+TGG - chr8_2:53455096-53455115 None:intergenic 60.0%
AGAACCGAGCCAAGGCTCGA+TGG + chr8_2:53455095-53455114 Msa1255040:CDS 60.0%
GAGTCCATCGAGCCTTGGCT+CGG - chr8_2:53455102-53455121 None:intergenic 60.0%
CCAAGGAGTCCATCGAGCCT+TGG - chr8_2:53455107-53455126 None:intergenic 60.0%
! CCAAGGCTCGATGGACTCCT+TGG + chr8_2:53455104-53455123 Msa1255040:CDS 60.0%
TGGAGCTGCTCATGCCACCT+AGG - chr8_2:53455147-53455166 None:intergenic 60.0%
GGCATGAGCAGCTCCAGTGT+TGG + chr8_2:53455151-53455170 Msa1255040:CDS 60.0%
! TCGGTGCTTGACGAACCGTG+CGG - chr8_2:53455474-53455493 None:intergenic 60.0%
CACCGAGCACTTCAGCATGC+AGG + chr8_2:53455488-53455507 Msa1255040:three_prime_UTR 60.0%
CTTCACCGCCACCGCGATTC+TGG - chr8_2:53452917-53452936 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 53452743 53455772 53452743 ID=Msa1255040;Name=Msa1255040
chr8_2 mRNA 53452743 53455772 53452743 ID=Msa1255040-mRNA-1;Parent=Msa1255040;Name=Msa1255040-mRNA-1;_AED=0.08;_eAED=0.08;_QI=428|1|1|1|0.75|0.6|5|368|412
chr8_2 exon 53452743 53453114 53452743 ID=Msa1255040-mRNA-1:exon:16513;Parent=Msa1255040-mRNA-1
chr8_2 exon 53453714 53454117 53453714 ID=Msa1255040-mRNA-1:exon:16514;Parent=Msa1255040-mRNA-1
chr8_2 exon 53454217 53454304 53454217 ID=Msa1255040-mRNA-1:exon:16515;Parent=Msa1255040-mRNA-1
chr8_2 exon 53454509 53454638 53454509 ID=Msa1255040-mRNA-1:exon:16516;Parent=Msa1255040-mRNA-1
chr8_2 exon 53454732 53455772 53454732 ID=Msa1255040-mRNA-1:exon:16517;Parent=Msa1255040-mRNA-1
chr8_2 five_prime_UTR 53452743 53453114 53452743 ID=Msa1255040-mRNA-1:five_prime_utr;Parent=Msa1255040-mRNA-1
chr8_2 five_prime_UTR 53453714 53453769 53453714 ID=Msa1255040-mRNA-1:five_prime_utr;Parent=Msa1255040-mRNA-1
chr8_2 CDS 53453770 53454117 53453770 ID=Msa1255040-mRNA-1:cds;Parent=Msa1255040-mRNA-1
chr8_2 CDS 53454217 53454304 53454217 ID=Msa1255040-mRNA-1:cds;Parent=Msa1255040-mRNA-1
chr8_2 CDS 53454509 53454638 53454509 ID=Msa1255040-mRNA-1:cds;Parent=Msa1255040-mRNA-1
chr8_2 CDS 53454732 53455404 53454732 ID=Msa1255040-mRNA-1:cds;Parent=Msa1255040-mRNA-1
chr8_2 three_prime_UTR 53455405 53455772 53455405 ID=Msa1255040-mRNA-1:three_prime_utr;Parent=Msa1255040-mRNA-1
Gene Sequence

>Msa1255040

ATGTCATTCAAAAGCATAGTCCGCGAACTCAAGGGGATGAAAAATGGAATAGGTAGCATATCAAAGCGGGGTTCCGACACCAAGAATTGGCTATGTCGGTCAAAGTCACATGTTGCTCCGGATGTAACTCCAATTGAACCTATTCAACAGGGACAGTGGGCGAGTCTACCTCCTGAATTGCTTTTGGACATAATCCGTAGGGTTGAAGAGAGTGAGACATCTTGGCCTGCTCGTGCTGTTGTTGTTTTTTGTGCTTCGGTATGTAAATCATGGAGGTCCGTTACTAAAGAGATTATCAAGACTCCTCAGCAATGCGGAAGGATCACATTTCCTATTTCATTGAAGCAGCCCGGTCCTCGTGATTATCCGATCCAGTGCTTTATTAGGAGGAACAGAGAAACTTCTACCTTCGTGTTGTACTTAGGTTTGGTGCCATCGGAGCATGAGAGTAATAAGTTGTTGTTAGCCGCCAGAAAGATAAGAAGGGCCACAGGCACCGACTTTGTCATATCCTTGGGCACAGATGATTTTTCTCGAGCCAGCAACAAATATGTTGGTAAACTGAGGTCTAATTTTTGGGGAACCAAGTTTGCTATATATGACAACCAACCTCCACATGACGCTGCAGTTCAACCTAATCGTCGACCAAGTGCAAGACTTAATTCTAAGCAGGTGTCACCAAGAGTTCCAGCATGTAACAATCTTGTTGGCACCATTTCCTATGAGCTAAATGCTCTCTGGACAAGAGGGCCAAGAAGAGTGCACTGCATCATGAACTCTATACCTATCTCAGCTATTCAGGAAGGGGGTATCGCCCCAACCCCAACATCGTTACCTCAAATATTCAGTGAACCTTTTCCTCCCTCACCAGCACTGAAAGAAAAAAGTCCAATGACAGATTCGTACTCTGGTTGCCTATCAGAGCTACCAGAACCGAGCCAAGGCTCGATGGACTCCTTGGTACTTAAAAACAAGTCTCCTAGGTGGCATGAGCAGCTCCAGTGTTGGTGCCTAAACTTCATGGGTCGTGTTACAGTGGCATCTGTTAAGAACTTTCAACTTGTAGCTTCTGTTGATCCGTCTCATAATGTTTCTTCCGCTGAGCAAGAAAGGGTAATCTTACAGTTTGGAAAGATTGGAAAAGATATATTCACCATGGACTACTCTTACCCACTCTCTGCCTTCCAAGCCTTTGCAATCTGTTTGACAAGCTTTGATACCAAACCTGCTTGTGAATGA

Protein sequence

>Msa1255040

MSFKSIVRELKGMKNGIGSISKRGSDTKNWLCRSKSHVAPDVTPIEPIQQGQWASLPPELLLDIIRRVEESETSWPARAVVVFCASVCKSWRSVTKEIIKTPQQCGRITFPISLKQPGPRDYPIQCFIRRNRETSTFVLYLGLVPSEHESNKLLLAARKIRRATGTDFVISLGTDDFSRASNKYVGKLRSNFWGTKFAIYDNQPPHDAAVQPNRRPSARLNSKQVSPRVPACNNLVGTISYELNALWTRGPRRVHCIMNSIPISAIQEGGIAPTPTSLPQIFSEPFPPSPALKEKSPMTDSYSGCLSELPEPSQGSMDSLVLKNKSPRWHEQLQCWCLNFMGRVTVASVKNFQLVASVDPSHNVSSAEQERVILQFGKIGKDIFTMDYSYPLSAFQAFAICLTSFDTKPACE*