AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215030 MtrunA17_Chr4g0064091 97.500 480 11 1 1 480 1 479 0.0 979
Msa1215030 MtrunA17_Chr2g0333591 48.252 429 211 6 27 455 27 444 1.44e-144 422
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215030 AT2G42160.1 61.179 492 175 6 1 480 1 488 0.0 629
Msa1215030 AT2G42160.2 62.045 440 153 4 1 429 1 437 0.0 577
Msa1215030 AT2G42160.3 62.129 404 139 4 1 393 1 401 0.0 531
Msa1215030 AT2G26000.3 41.416 466 252 9 27 480 22 478 7.83e-129 382
Msa1215030 AT2G26000.2 41.416 466 252 9 27 480 22 478 7.83e-129 382
Msa1215030 AT2G26000.1 39.056 466 245 10 27 480 22 460 1.52e-115 348

Find 142 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACACGTATTCGAATTTA+TGG 0.122198 8_1:+76067536 Msa1215030:three_prime_UTR
CCTCTGCGTTCTGTGAATTT+AGG 0.150005 8_1:-76062832 None:intergenic
GGTGAGAGAGAATTGGAATT+AGG 0.180412 8_1:-76062895 None:intergenic
CTCTGCGTTCTGTGAATTTA+GGG 0.219295 8_1:-76062831 None:intergenic
AAACTTCTTGCCATTGAAAT+AGG 0.232877 8_1:-76063188 None:intergenic
AGTGAAGATTTAGAAGTTAA+TGG 0.246664 8_1:+76065840 Msa1215030:CDS
TGTACAATTGAGAATGATAT+TGG 0.246949 8_1:+76067779 Msa1215030:three_prime_UTR
GTGCGTATTCCACTTGTATC+AGG 0.257066 8_1:-76064115 None:intergenic
GTGAGAGAGAATTGGAATTA+GGG 0.271739 8_1:-76062894 None:intergenic
GTGGAGAAGGCTGCAACTTC+TGG 0.280137 8_1:+76066861 Msa1215030:CDS
GAATGAGAGGGTCCTTGATT+TGG 0.301939 8_1:+76067247 Msa1215030:CDS
CATTCTGCCCTTAGGTTAAT+CGG 0.302536 8_1:+76067002 Msa1215030:intron
GTGAAGATTTAGAAGTTAAT+GGG 0.313739 8_1:+76065841 Msa1215030:CDS
TCATCGAAGGAGAAATAATT+AGG 0.314747 8_1:-76062940 None:intergenic
CTTCCTTGTGCAGTGGTAGT+TGG 0.319845 8_1:+76062584 Msa1215030:five_prime_UTR
TGAATTGTGAATGTGGAAAA+TGG 0.329568 8_1:-76062681 None:intergenic
CATCCTGTTGTTGACATAAT+CGG 0.338420 8_1:-76065365 None:intergenic
CTTTATATATAGAGTTCGTT+TGG 0.341353 8_1:-76062631 None:intergenic
GAGAAGAGGTGAGAGAGAAT+TGG 0.361552 8_1:-76062902 None:intergenic
GTCAGACTCAAATGGAATAA+AGG 0.364370 8_1:+76067413 Msa1215030:CDS
TTATGTCCATCGACTGAATC+AGG 0.387311 8_1:+76065734 Msa1215030:CDS
ATATAGAGTTCGTTTGGGTT+TGG 0.388436 8_1:-76062625 None:intergenic
ACAACAAATTTGGGATTATG+TGG 0.392975 8_1:+76065704 Msa1215030:CDS
TTCATCATCTTCTCTTCATC+AGG 0.396642 8_1:+76063001 Msa1215030:CDS
CGGAGAAAGAATAACGCGTT+TGG 0.398175 8_1:-76062707 None:intergenic
ACCAACATGTCCAGTTTGCT+TGG 0.402731 8_1:+76063930 Msa1215030:CDS
CCGTCTTCTTACATCTCAAT+TGG 0.403056 8_1:+76066454 Msa1215030:CDS
GTCTGGGTTTGTATGATTTG+TGG 0.411595 8_1:+76065426 Msa1215030:CDS
GTGGAACATTAGATGATGTC+TGG 0.413609 8_1:+76065409 Msa1215030:CDS
ACTTCTTGCCTCAATTAGTA+AGG 0.414456 8_1:-76066811 None:intergenic
TGAAACTCACCCAAGCAAAC+TGG 0.414850 8_1:-76063940 None:intergenic
GGTCCTTGATTTGGAGGAAC+AGG 0.415267 8_1:+76067256 Msa1215030:CDS
TTCAACTTTGCTGTTAAAGA+AGG 0.416559 8_1:-76065865 None:intergenic
GCATTTCATACCTATTTCAA+TGG 0.416711 8_1:+76063178 Msa1215030:CDS
ATCAATGAGTAAGCCCTATC+CGG 0.417887 8_1:-76067726 None:intergenic
TGTTTGAATCCCAGAGAGAC+TGG 0.421884 8_1:+76064090 Msa1215030:intron
TTCTTGCTGTTTCCAGGAGA+AGG 0.425015 8_1:-76067468 None:intergenic
TTTCCTGTGGCAGTTAAGTC+AGG 0.436305 8_1:-76067639 None:intergenic
TTTATATATAGAGTTCGTTT+GGG 0.442349 8_1:-76062630 None:intergenic
TGCAACTTGTTTGCTTTGTG+TGG 0.442472 8_1:+76067692 Msa1215030:three_prime_UTR
GCTCATGAGCAACCTTCTCC+TGG 0.443145 8_1:+76067456 Msa1215030:CDS
GTTCACTGTATGTCTCTAGA+AGG 0.443877 8_1:+76065795 Msa1215030:CDS
GGAGCGGAGAAGATGAGTTC+GGG 0.448861 8_1:-76062790 None:intergenic
GAGAGGAGTGTGAAGCGCTT+CGG 0.450487 8_1:-76062870 None:intergenic
GGCTGCAACTTCTGGCATGC+TGG 0.450669 8_1:+76066869 Msa1215030:CDS
TGGAGCGGAGAAGATGAGTT+CGG 0.454323 8_1:-76062791 None:intergenic
GATGAAGACGATCAAGATAG+TGG 0.455616 8_1:-76062984 None:intergenic
AGAATTGGAATTAGGGAGAG+AGG 0.456750 8_1:-76062887 None:intergenic
GCAACTTGTTTGCTTTGTGT+GGG 0.456787 8_1:+76067693 Msa1215030:three_prime_UTR
GATAAAATGTCAGACTCAAA+TGG 0.459339 8_1:+76067405 Msa1215030:CDS
GGAACGATGGGATGGAAGAT+AGG 0.463072 8_1:+76063113 Msa1215030:intron
CGTCGTCGACTGAGTGGACT+CGG 0.465807 8_1:-76062753 None:intergenic
TCTCCTTCGATGATTTCATT+CGG 0.467942 8_1:+76062950 Msa1215030:CDS
GGAGAAAGAATAACGCGTTT+GGG 0.469234 8_1:-76062706 None:intergenic
CTGCCGATTATGTCAACAAC+AGG 0.469592 8_1:+76065362 Msa1215030:CDS
TTATGAATCCTTACTAATTG+AGG 0.471285 8_1:+76066803 Msa1215030:CDS
TCGGAATGTGAAGAAGTTGC+TGG 0.471476 8_1:+76063880 Msa1215030:CDS
TAGAGTTCGTTTGGGTTTGG+CGG 0.476305 8_1:-76062622 None:intergenic
AAGAACATGGTTTCTTTGAT+CGG 0.476637 8_1:-76062727 None:intergenic
TTTGATTTGGTAGGAACGAT+GGG 0.480219 8_1:+76063101 Msa1215030:intron
TGTATGATTTGTGGATTTGT+CGG 0.483896 8_1:+76065435 Msa1215030:CDS
GTGGACATATTTGTCTTGCC+AGG 0.485200 8_1:+76064180 Msa1215030:CDS
TGAGAGGGTCCTTGATTTGG+AGG 0.485934 8_1:+76067250 Msa1215030:CDS
TGGGGATGTAATCCCCGGAT+AGG 0.488434 8_1:+76067712 Msa1215030:three_prime_UTR
CCGTTATTACTTACCTCAGC+AGG 0.492902 8_1:-76063214 None:intergenic
GATATGCATTAGAACACTCT+TGG 0.493745 8_1:-76067600 None:intergenic
ATTTGTGGATTTGTCGGATG+TGG 0.494341 8_1:+76065441 Msa1215030:CDS
CCAACATGTCCAGTTTGCTT+GGG 0.495855 8_1:+76063931 Msa1215030:CDS
AGAGTTCGTTTGGGTTTGGC+GGG 0.511424 8_1:-76062621 None:intergenic
GTTGCTGGGACTCCTCCAGC+TGG 0.513889 8_1:+76063895 Msa1215030:CDS
CTTCTCCACTGCTTCAGATA+CGG 0.513939 8_1:-76066847 None:intergenic
CAAAGCAAACAAGTTGCAAT+GGG 0.518455 8_1:-76067687 None:intergenic
CAGGATCAATCTAGAATTGA+CGG 0.519347 8_1:+76065753 Msa1215030:CDS
TCAATGAGTAAGCCCTATCC+GGG 0.520907 8_1:-76067725 None:intergenic
TTCACTGTATGTCTCTAGAA+GGG 0.522047 8_1:+76065796 Msa1215030:CDS
TTTGCTTTCCGTGGAATACT+CGG 0.522856 8_1:+76063861 Msa1215030:CDS
TGCGTATTCCACTTGTATCA+GGG 0.527421 8_1:-76064114 None:intergenic
GTTCCACAAATAAAACAAGT+TGG 0.529607 8_1:-76065393 None:intergenic
CGCAAGGGCATTGAAATGAA+TGG 0.532039 8_1:-76064150 None:intergenic
TTCCTTCCTTCCTTGTGCAG+TGG 0.535609 8_1:+76062577 Msa1215030:five_prime_UTR
GGTATTTCTGTACAACCAGC+TGG 0.536457 8_1:-76063910 None:intergenic
GGGGATGTAATCCCCGGATA+GGG 0.540545 8_1:+76067713 Msa1215030:three_prime_UTR
AGAAGTAAAATTCATAGCAA+AGG 0.544078 8_1:-76067819 None:intergenic
AAGGACATGCTATTCAGCAT+TGG 0.544403 8_1:+76065643 Msa1215030:CDS
ATTGATCCTGATTCAGTCGA+TGG 0.544517 8_1:-76065740 None:intergenic
ATACCTGTTCCTCCAAATCA+AGG 0.546149 8_1:-76067259 None:intergenic
ATGAAGACGATCAAGATAGT+GGG 0.546605 8_1:-76062983 None:intergenic
CTTTAACAGCAAAGTTGAAG+CGG 0.546937 8_1:+76065869 Msa1215030:CDS
TTTCTCATTACTTCGAGCAT+CGG 0.547637 8_1:-76067750 None:intergenic
ATTTGGTAGGAACGATGGGA+TGG 0.551457 8_1:+76063105 Msa1215030:intron
ACGTATTCGAATTTATGGAC+TGG 0.551755 8_1:+76067541 Msa1215030:three_prime_UTR
ACAAAGCAAACAAGTTGCAA+TGG 0.552915 8_1:-76067688 None:intergenic
CAACTTGTTTGCTTTGTGTG+GGG 0.554374 8_1:+76067694 Msa1215030:three_prime_UTR
TGGAACATTAGATGATGTCT+GGG 0.559204 8_1:+76065410 Msa1215030:CDS
TTCACATTCCGAGTATTCCA+CGG 0.559393 8_1:-76063869 None:intergenic
CGTATCTGAAGCAGTGGAGA+AGG 0.559498 8_1:+76066848 Msa1215030:CDS
AGATTAAAGAAGCAGAAGAG+AGG 0.561135 8_1:+76067059 Msa1215030:CDS
CAACAAATTTGGGATTATGT+GGG 0.563048 8_1:+76065705 Msa1215030:CDS
GAAGGTTGCTCATGAGCCAC+TGG 0.563743 8_1:-76067450 None:intergenic
CGGAATGTGAAGAAGTTGCT+GGG 0.571574 8_1:+76063881 Msa1215030:CDS
TTCTTGGGATTGGGTTGGAG+CGG 0.574169 8_1:-76062806 None:intergenic
AATGCCCTTGCGTCTCAAAG+TGG 0.575637 8_1:+76064161 Msa1215030:CDS
TACCACTGCACAAGGAAGGA+AGG 0.576990 8_1:-76062579 None:intergenic
GTACCTGACTTAACTGCCAC+AGG 0.577510 8_1:+76067636 Msa1215030:three_prime_UTR
GATTCTCGTCGTCGACTGAG+TGG 0.577788 8_1:-76062759 None:intergenic
CATTGAAGTCGATGAATGAG+AGG 0.577929 8_1:+76067234 Msa1215030:CDS
TAGAATTGACGGCAAGTCGA+AGG 0.578499 8_1:+76065764 Msa1215030:CDS
TATGTCCACTTTGAGACGCA+AGG 0.588521 8_1:-76064166 None:intergenic
AGAAAGAAATGTTGTTGCTG+AGG 0.588529 8_1:+76066923 Msa1215030:CDS
AAGATGAGTTCGGGATCGAG+TGG 0.588594 8_1:-76062781 None:intergenic
TTGTGTGGGGATGTAATCCC+CGG 0.591669 8_1:+76067707 Msa1215030:three_prime_UTR
AGACTCAAATGGAATAAAGG+AGG 0.592588 8_1:+76067416 Msa1215030:CDS
GTGGATTTGTCGGATGTGGA+AGG 0.595592 8_1:+76065445 Msa1215030:CDS
CCCAAGCAAACTGGACATGT+TGG 0.601547 8_1:-76063931 None:intergenic
TTGTGAATGTGGAAAATGGA+AGG 0.607125 8_1:-76062677 None:intergenic
AAGCTCCGTATCTGAAGCAG+TGG 0.608444 8_1:+76066842 Msa1215030:CDS
CAACTACCACTGCACAAGGA+AGG 0.608703 8_1:-76062583 None:intergenic
ATGTCCACTTTGAGACGCAA+GGG 0.620907 8_1:-76064165 None:intergenic
GACTCAAATGGAATAAAGGA+GGG 0.622185 8_1:+76067417 Msa1215030:CDS
GTGGACTCGGAGGAAGAACA+TGG 0.623052 8_1:-76062740 None:intergenic
ACAGCGAGGATGAAGAGAAG+AGG 0.623767 8_1:-76062916 None:intergenic
TGGGAGCTGAAATGTAAGGT+GGG 0.623977 8_1:-76067668 None:intergenic
TGAAGATTTAGAAGTTAATG+GGG 0.626069 8_1:+76065842 Msa1215030:CDS
TTGGGTCTGAATTGTGAATG+TGG 0.629630 8_1:-76062688 None:intergenic
TCACTGTATGTCTCTAGAAG+GGG 0.634476 8_1:+76065797 Msa1215030:CDS
CCAATTGAGATGTAAGAAGA+CGG 0.636618 8_1:-76066454 None:intergenic
AAACCGAATGAAATCATCGA+AGG 0.643428 8_1:-76062953 None:intergenic
AAAACAGAAAGTCTGGTCGA+AGG 0.644959 8_1:+76067490 Msa1215030:CDS
ACAGAAAGTCTGGTCGAAGG+CGG 0.651997 8_1:+76067493 Msa1215030:CDS
GCAATGGGAGCTGAAATGTA+AGG 0.665081 8_1:-76067672 None:intergenic
ATGGGAGCTGAAATGTAAGG+TGG 0.666276 8_1:-76067669 None:intergenic
TGTGAATGTGGAAAATGGAA+GGG 0.670214 8_1:-76062676 None:intergenic
GTTCCAACTACCACTGCACA+AGG 0.671019 8_1:-76062587 None:intergenic
ATTGAAGTCGATGAATGAGA+GGG 0.674240 8_1:+76067235 Msa1215030:CDS
CCTAAATTCACAGAACGCAG+AGG 0.674835 8_1:+76062832 Msa1215030:CDS
AGACTGGACCCTGATACAAG+TGG 0.679214 8_1:+76064106 Msa1215030:CDS
TGAAGACGATCAAGATAGTG+GGG 0.690985 8_1:-76062982 None:intergenic
ATTTCTGTACAACCAGCTGG+AGG 0.702761 8_1:-76063907 None:intergenic
AGAAATAATTAGGAACAGCG+AGG 0.702814 8_1:-76062930 None:intergenic
GGAGGGAACAGTCTTACCAG+TGG 0.721862 8_1:+76067434 Msa1215030:CDS
CGTCGACTGAGTGGACTCGG+AGG 0.727644 8_1:-76062750 None:intergenic
CAATGAGTAAGCCCTATCCG+GGG 0.744983 8_1:-76067724 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAATCAACAATTA+GGG - chr8_1:76063084-76063103 None:intergenic 10.0%
!! ATAATTATGAAATATTATCT+TGG + chr8_1:76064517-76064536 Msa1215030:intron 10.0%
!! TAATTATGAAATATTATCTT+GGG + chr8_1:76064518-76064537 Msa1215030:intron 10.0%
!!! TTTTTATTTTCTAAAAAACA+AGG + chr8_1:76065099-76065118 Msa1215030:intron 10.0%
!! TATATAAATGACAATAAAAT+GGG - chr8_1:76065555-76065574 None:intergenic 10.0%
!! CAAAATTAAAATCAACAATT+AGG - chr8_1:76063085-76063104 None:intergenic 15.0%
!!! TGTTGATTTTAATTTTGATT+TGG + chr8_1:76063088-76063107 Msa1215030:intron 15.0%
!!! ACTTTTTTTTTCTTTTTCAA+GGG - chr8_1:76063354-76063373 None:intergenic 15.0%
!! TCAAATAAGTTAATTCAAAT+AGG + chr8_1:76063482-76063501 Msa1215030:intron 15.0%
!! TCAAGTAAATAGTATTAATA+AGG + chr8_1:76063609-76063628 Msa1215030:intron 15.0%
!! CAAGTAAATAGTATTAATAA+GGG + chr8_1:76063610-76063629 Msa1215030:intron 15.0%
!! ATAAATTTAAAAAACGACAA+AGG - chr8_1:76063760-76063779 None:intergenic 15.0%
!!! TTGTCGTTTTTTAAATTTAT+TGG + chr8_1:76063760-76063779 Msa1215030:intron 15.0%
!! TATTATTACACTTTAATCTT+TGG + chr8_1:76064241-76064260 Msa1215030:intron 15.0%
!!! AAGTATGTCTAAATAAATTT+TGG - chr8_1:76064812-76064831 None:intergenic 15.0%
!! CCAACTTAAATTAATAATTA+GGG - chr8_1:76065053-76065072 None:intergenic 15.0%
!!! CCTAATTATTAATTTAAGTT+GGG + chr8_1:76065051-76065070 Msa1215030:intron 15.0%
!! TTTGTTTAACATATTAAGTA+GGG - chr8_1:76065527-76065546 None:intergenic 15.0%
!!! TTTTGTTTAACATATTAAGT+AGG - chr8_1:76065528-76065547 None:intergenic 15.0%
!! CTATATAAATGACAATAAAA+TGG - chr8_1:76065556-76065575 None:intergenic 15.0%
!!! CATTTTATTGTCATTTATAT+AGG + chr8_1:76065554-76065573 Msa1215030:intron 15.0%
!!! TTTTAATCTAGATATAAAGA+AGG + chr8_1:76065624-76065643 Msa1215030:intron 15.0%
!!! ATTATAATGTTAACTTGTTA+AGG - chr8_1:76065975-76065994 None:intergenic 15.0%
!! CATTTATAGAATAACTATAT+GGG - chr8_1:76066253-76066272 None:intergenic 15.0%
!! CATATAGTTATTCTATAAAT+GGG + chr8_1:76066252-76066271 Msa1215030:intron 15.0%
!! TCATAATACTAAAACAAAAA+TGG - chr8_1:76066789-76066808 None:intergenic 15.0%
!!! AGTAAAGTTGTTTTTTTTTT+TGG + chr8_1:76067150-76067169 Msa1215030:intron 15.0%
!! TTTAAATATGTGATCATTTA+GGG + chr8_1:76067202-76067221 Msa1215030:intron 15.0%
!! TTTATATATAGAGTTCGTTT+GGG - chr8_1:76062633-76062652 None:intergenic 20.0%
!!! ATTACAGAACTTTTTCAAAA+TGG - chr8_1:76063044-76063063 None:intergenic 20.0%
!!! GATTTTAATTTTGATTTGGT+AGG + chr8_1:76063092-76063111 Msa1215030:intron 20.0%
!!! GACTTTTTTTTTCTTTTTCA+AGG - chr8_1:76063355-76063374 None:intergenic 20.0%
!! AATAGGACTTAAGTAAAAAT+AGG + chr8_1:76063499-76063518 Msa1215030:intron 20.0%
!!! TTAATGTGTTATTTTGTGTA+TGG + chr8_1:76063530-76063549 Msa1215030:intron 20.0%
!! TTGAAATGAAGCTTATATTT+AGG + chr8_1:76063660-76063679 Msa1215030:intron 20.0%
!! TGAAATGAAGCTTATATTTA+GGG + chr8_1:76063661-76063680 Msa1215030:intron 20.0%
!! TTCAAAAAAGACTTGTATTT+AGG + chr8_1:76063695-76063714 Msa1215030:intron 20.0%
!!! AAGGTATTAATTGATTATTG+AGG - chr8_1:76063741-76063760 None:intergenic 20.0%
!!! GAGAATATCATAATTTTGTT+TGG + chr8_1:76064548-76064567 Msa1215030:intron 20.0%
!! TTTATCTTTATACAAGAGTT+TGG - chr8_1:76064672-76064691 None:intergenic 20.0%
!!! ACTAAATGGATTTTAATATC+TGG - chr8_1:76065021-76065040 None:intergenic 20.0%
!! CCCTAATTATTAATTTAAGT+TGG + chr8_1:76065050-76065069 Msa1215030:intron 20.0%
!! CCCAACTTAAATTAATAATT+AGG - chr8_1:76065054-76065073 None:intergenic 20.0%
!!! TATTTTCTAAAAAACAAGGA+AGG + chr8_1:76065103-76065122 Msa1215030:intron 20.0%
!!! ATTTTCTAAAAAACAAGGAA+GGG + chr8_1:76065104-76065123 Msa1215030:intron 20.0%
!! TGGAAATATTATTGTATTGA+TGG + chr8_1:76065297-76065316 Msa1215030:intron 20.0%
!! ACTTATGATGTTTATATTGT+AGG + chr8_1:76065338-76065357 Msa1215030:intron 20.0%
!!! ATTTTAGAACACAACAAATT+TGG + chr8_1:76065694-76065713 Msa1215030:CDS 20.0%
!!! TTTTAGAACACAACAAATTT+GGG + chr8_1:76065695-76065714 Msa1215030:CDS 20.0%
!!! ATTTTATGCTGATACTAATT+TGG + chr8_1:76066104-76066123 Msa1215030:intron 20.0%
!!! TTTTATGCTGATACTAATTT+GGG + chr8_1:76066105-76066124 Msa1215030:intron 20.0%
!! CCATTTATAGAATAACTATA+TGG - chr8_1:76066254-76066273 None:intergenic 20.0%
!! CCATATAGTTATTCTATAAA+TGG + chr8_1:76066251-76066270 Msa1215030:intron 20.0%
!! TCATTAAAAATTCAGAAATG+TGG + chr8_1:76067029-76067048 Msa1215030:CDS 20.0%
!! TTAAACATGTAATGAGAATA+TGG - chr8_1:76067187-76067206 None:intergenic 20.0%
!! GTTTAAATATGTGATCATTT+AGG + chr8_1:76067201-76067220 Msa1215030:intron 20.0%
! CTTTATATATAGAGTTCGTT+TGG - chr8_1:76062634-76062653 None:intergenic 25.0%
!!! ATAGGTATAGTGTTTTGATT+AGG + chr8_1:76063131-76063150 Msa1215030:CDS 25.0%
! ACATGACAAGTACAAATTTA+TGG - chr8_1:76063250-76063269 None:intergenic 25.0%
!!! GTTTTTTGTATAAGCTATCT+TGG + chr8_1:76063380-76063399 Msa1215030:intron 25.0%
! ACTTATTTGAGCTTATTTAC+TGG - chr8_1:76063472-76063491 None:intergenic 25.0%
! AAAGAGAGATATACGTAATA+AGG - chr8_1:76063790-76063809 None:intergenic 25.0%
! TCAAATGATGATCAAAATGT+AGG + chr8_1:76063816-76063835 Msa1215030:intron 25.0%
! CGGAAAGCAAAAATAAAATA+TGG - chr8_1:76063852-76063871 None:intergenic 25.0%
!!! TATTTTATTTTTGCTTTCCG+TGG + chr8_1:76063852-76063871 Msa1215030:CDS 25.0%
! GTGTAATAATATGTCAAAAC+AGG - chr8_1:76064232-76064251 None:intergenic 25.0%
! ATTACACTTTAATCTTTGGT+TGG + chr8_1:76064245-76064264 Msa1215030:intron 25.0%
! TAAAGATAAAAGATGCAACA+TGG + chr8_1:76064682-76064701 Msa1215030:intron 25.0%
! AAAGATAAAAGATGCAACAT+GGG + chr8_1:76064683-76064702 Msa1215030:intron 25.0%
!!! ATCAGTTCTTTAATTTTCGT+TGG + chr8_1:76065480-76065499 Msa1215030:intron 25.0%
!!! TTATTTGCTTTTGTTTTGTC+AGG + chr8_1:76065577-76065596 Msa1215030:intron 25.0%
!!! TATTTGCTTTTGTTTTGTCA+GGG + chr8_1:76065578-76065597 Msa1215030:intron 25.0%
! AGTGAAGATTTAGAAGTTAA+TGG + chr8_1:76065840-76065859 Msa1215030:CDS 25.0%
! GTGAAGATTTAGAAGTTAAT+GGG + chr8_1:76065841-76065860 Msa1215030:CDS 25.0%
! TGAAGATTTAGAAGTTAATG+GGG + chr8_1:76065842-76065861 Msa1215030:CDS 25.0%
!! ACCTTAACAAGTTTTTAACA+AGG + chr8_1:76065945-76065964 Msa1215030:intron 25.0%
! AGTGAAAAAAATTTCAAGGA+TGG - chr8_1:76066508-76066527 None:intergenic 25.0%
!!! CTTGAAATTTTTTTCACTGT+GGG + chr8_1:76066510-76066529 Msa1215030:intron 25.0%
!!! TTGAAATTTTTTTCACTGTG+GGG + chr8_1:76066511-76066530 Msa1215030:intron 25.0%
! AAGTGATGTAATTTATAGTG+TGG + chr8_1:76066637-76066656 Msa1215030:intron 25.0%
! TTATGAATCCTTACTAATTG+AGG + chr8_1:76066803-76066822 Msa1215030:CDS 25.0%
!!! TACACTTTTCTAGTTCATTT+TGG - chr8_1:76066899-76066918 None:intergenic 25.0%
! TAACTTCATTCCAAACAAAT+TGG - chr8_1:76067108-76067127 None:intergenic 25.0%
! TCTATACAAAGGATTAATGA+AGG - chr8_1:76067293-76067312 None:intergenic 25.0%
! ATTGGAAAACTTCTATACAA+AGG - chr8_1:76067304-76067323 None:intergenic 25.0%
!! CAATTTTATTGTTCTCTGAT+GGG + chr8_1:76067320-76067339 Msa1215030:intron 25.0%
!!! ATGCATATCTGAAATTTTGA+TGG + chr8_1:76067614-76067633 Msa1215030:three_prime_UTR 25.0%
! TGTACAATTGAGAATGATAT+TGG + chr8_1:76067779-76067798 Msa1215030:three_prime_UTR 25.0%
! AGAAGTAAAATTCATAGCAA+AGG - chr8_1:76067822-76067841 None:intergenic 25.0%
TGAATTGTGAATGTGGAAAA+TGG - chr8_1:76062684-76062703 None:intergenic 30.0%
AAGAACATGGTTTCTTTGAT+CGG - chr8_1:76062730-76062749 None:intergenic 30.0%
!! TGTGAATTTAGGGTTTTCTT+GGG - chr8_1:76062824-76062843 None:intergenic 30.0%
TCATCGAAGGAGAAATAATT+AGG - chr8_1:76062943-76062962 None:intergenic 30.0%
GCATTTCATACCTATTTCAA+TGG + chr8_1:76063178-76063197 Msa1215030:CDS 30.0%
AAACTTCTTGCCATTGAAAT+AGG - chr8_1:76063191-76063210 None:intergenic 30.0%
AAACACTTATGAGACTGTTT+GGG - chr8_1:76063446-76063465 None:intergenic 30.0%
TAAACACTTATGAGACTGTT+TGG - chr8_1:76063447-76063466 None:intergenic 30.0%
TGAACACATCTATATGCAAA+AGG - chr8_1:76063571-76063590 None:intergenic 30.0%
CATATAGATGTGTTCAATTC+TGG + chr8_1:76063575-76063594 Msa1215030:intron 30.0%
! AAAACAGGTTTTCATGGAAT+GGG - chr8_1:76064217-76064236 None:intergenic 30.0%
! TATGTCAAAACAGGTTTTCA+TGG - chr8_1:76064223-76064242 None:intergenic 30.0%
AAGAGTTATATTGCCTAACT+AGG + chr8_1:76064362-76064381 Msa1215030:intron 30.0%
CCAAATACGTTCTTAAACTT+TGG - chr8_1:76064479-76064498 None:intergenic 30.0%
CCAAAGTTTAAGAACGTATT+TGG + chr8_1:76064476-76064495 Msa1215030:intron 30.0%
! CTAGGTTGGAAAAAATTGAT+AGG - chr8_1:76064727-76064746 None:intergenic 30.0%
!!! CTATCAATTTTTTCCAACCT+AGG + chr8_1:76064725-76064744 Msa1215030:intron 30.0%
GACATACTTCACTTATTGTT+CGG + chr8_1:76064823-76064842 Msa1215030:intron 30.0%
TAGGGAGAAAATACACTAAA+TGG - chr8_1:76065035-76065054 None:intergenic 30.0%
!!! AACAAAAGCACTGGTTTTAT+TGG + chr8_1:76065265-76065284 Msa1215030:intron 30.0%
!!! AAGCCAACTTGTTTTATTTG+TGG + chr8_1:76065390-76065409 Msa1215030:CDS 30.0%
GTTCCACAAATAAAACAAGT+TGG - chr8_1:76065396-76065415 None:intergenic 30.0%
! TGTATGATTTGTGGATTTGT+CGG + chr8_1:76065435-76065454 Msa1215030:CDS 30.0%
! ACAACAAATTTGGGATTATG+TGG + chr8_1:76065704-76065723 Msa1215030:CDS 30.0%
! CAACAAATTTGGGATTATGT+GGG + chr8_1:76065705-76065724 Msa1215030:CDS 30.0%
!! TTCAACTTTGCTGTTAAAGA+AGG - chr8_1:76065868-76065887 None:intergenic 30.0%
!! GCCTTGTTAAAAACTTGTTA+AGG - chr8_1:76065949-76065968 None:intergenic 30.0%
!! TGTTTGCTGTGTAATTAACA+CGG + chr8_1:76066172-76066191 Msa1215030:intron 30.0%
GATGTGTAAACATTGTTTCA+TGG + chr8_1:76066305-76066324 Msa1215030:intron 30.0%
GCATGTGAAAGAAAAATCAT+CGG - chr8_1:76066385-76066404 None:intergenic 30.0%
! CTCTGTCACTGATTAATTAA+TGG + chr8_1:76066404-76066423 Msa1215030:intron 30.0%
CCACAGTGAAAAAAATTTCA+AGG - chr8_1:76066512-76066531 None:intergenic 30.0%
!!! CCTTGAAATTTTTTTCACTG+TGG + chr8_1:76066509-76066528 Msa1215030:intron 30.0%
GTTTCTTTCACTTATGATGA+AGG + chr8_1:76066673-76066692 Msa1215030:intron 30.0%
AGCAAGCAATAAGGAAATAT+AGG - chr8_1:76066959-76066978 None:intergenic 30.0%
! AAACAAATTGGTAGCTTAAG+TGG - chr8_1:76067096-76067115 None:intergenic 30.0%
! ACTTAAGCTACCAATTTGTT+TGG + chr8_1:76067095-76067114 Msa1215030:intron 30.0%
CCATCAGAGAACAATAAAAT+TGG - chr8_1:76067322-76067341 None:intergenic 30.0%
! CCAATTTTATTGTTCTCTGA+TGG + chr8_1:76067319-76067338 Msa1215030:intron 30.0%
GATAAAATGTCAGACTCAAA+TGG + chr8_1:76067405-76067424 Msa1215030:CDS 30.0%
AGAACACGTATTCGAATTTA+TGG + chr8_1:76067536-76067555 Msa1215030:three_prime_UTR 30.0%
!!! TATGGACTGGTTTAAGTTTT+TGG + chr8_1:76067554-76067573 Msa1215030:three_prime_UTR 30.0%
!!! CATTAACTGTTAGTTTTTCG+TGG + chr8_1:76067906-76067925 Msa1215030:three_prime_UTR 30.0%
! ATATAGAGTTCGTTTGGGTT+TGG - chr8_1:76062628-76062647 None:intergenic 35.0%
TGTGAATGTGGAAAATGGAA+GGG - chr8_1:76062679-76062698 None:intergenic 35.0%
TTGTGAATGTGGAAAATGGA+AGG - chr8_1:76062680-76062699 None:intergenic 35.0%
!! TTTAGGGTTTTCTTGGGATT+GGG - chr8_1:76062818-76062837 None:intergenic 35.0%
!! ATTTAGGGTTTTCTTGGGAT+TGG - chr8_1:76062819-76062838 None:intergenic 35.0%
!! CTGTGAATTTAGGGTTTTCT+TGG - chr8_1:76062825-76062844 None:intergenic 35.0%
GTGAGAGAGAATTGGAATTA+GGG - chr8_1:76062897-76062916 None:intergenic 35.0%
AGAAATAATTAGGAACAGCG+AGG - chr8_1:76062933-76062952 None:intergenic 35.0%
TCTCCTTCGATGATTTCATT+CGG + chr8_1:76062950-76062969 Msa1215030:CDS 35.0%
AAACCGAATGAAATCATCGA+AGG - chr8_1:76062956-76062975 None:intergenic 35.0%
! GATGATTTCATTCGGTTTTG+TGG + chr8_1:76062958-76062977 Msa1215030:CDS 35.0%
ATGAAGACGATCAAGATAGT+GGG - chr8_1:76062986-76063005 None:intergenic 35.0%
TTCATCATCTTCTCTTCATC+AGG + chr8_1:76063001-76063020 Msa1215030:CDS 35.0%
!!! TTTTGATTTGGTAGGAACGA+TGG + chr8_1:76063100-76063119 Msa1215030:intron 35.0%
!! TTTGATTTGGTAGGAACGAT+GGG + chr8_1:76063101-76063120 Msa1215030:intron 35.0%
!! AGGTAAGTAATAACGGGTTT+GGG + chr8_1:76063221-76063240 Msa1215030:intron 35.0%
!! CAACTTAGTTTGCAGCTTAT+AGG + chr8_1:76063300-76063319 Msa1215030:intron 35.0%
AAGCTATCTTGGACATCTTA+TGG + chr8_1:76063391-76063410 Msa1215030:intron 35.0%
TGAGGTGATTATGATTGTGT+GGG + chr8_1:76064033-76064052 Msa1215030:intron 35.0%
!! ATTGTGTGGGTTGATGTTTA+TGG + chr8_1:76064046-76064065 Msa1215030:intron 35.0%
! AAACAGGTTTTCATGGAATG+GGG - chr8_1:76064216-76064235 None:intergenic 35.0%
! CAAAACAGGTTTTCATGGAA+TGG - chr8_1:76064218-76064237 None:intergenic 35.0%
! ATTAGACTCTTAGAGCATCA+TGG + chr8_1:76064275-76064294 Msa1215030:intron 35.0%
! TTAGACTCTTAGAGCATCAT+GGG + chr8_1:76064276-76064295 Msa1215030:intron 35.0%
ATGATTCTTCATGAGAAGCT+TGG + chr8_1:76064315-76064334 Msa1215030:intron 35.0%
CTCACGATAATATCCTAGTT+AGG - chr8_1:76064378-76064397 None:intergenic 35.0%
CTAACTAGGATATTATCGTG+AGG + chr8_1:76064376-76064395 Msa1215030:intron 35.0%
AACGAGTTTGAAAGTTTCTC+AGG + chr8_1:76064432-76064451 Msa1215030:intron 35.0%
!!! ACACTTTTTAAGTCCCAAAG+TGG + chr8_1:76064592-76064611 Msa1215030:intron 35.0%
!!! TTTTTAAGTCCCAAAGTGGA+TGG + chr8_1:76064596-76064615 Msa1215030:intron 35.0%
ACCTTTATACCATCCACTTT+GGG - chr8_1:76064608-76064627 None:intergenic 35.0%
TACCTTTATACCATCCACTT+TGG - chr8_1:76064609-76064628 None:intergenic 35.0%
ATGAGCTTAATATCCTAGGT+TGG - chr8_1:76064741-76064760 None:intergenic 35.0%
ATACTTCACTTATTGTTCGG+AGG + chr8_1:76064826-76064845 Msa1215030:intron 35.0%
CCAGAATGCATTGAATTTCT+GGG + chr8_1:76064873-76064892 Msa1215030:intron 35.0%
! AATGCATTGAATTTCTGGGA+AGG + chr8_1:76064877-76064896 Msa1215030:intron 35.0%
AAGGTAACAACTTCAACACA+TGG + chr8_1:76064975-76064994 Msa1215030:intron 35.0%
TGGAATGTGCAATGATAAGT+TGG - chr8_1:76065001-76065020 None:intergenic 35.0%
! TTCTAAAAAACAAGGAAGGG+CGG + chr8_1:76065107-76065126 Msa1215030:intron 35.0%
CATCCTGTTGTTGACATAAT+CGG - chr8_1:76065368-76065387 None:intergenic 35.0%
TGGAACATTAGATGATGTCT+GGG + chr8_1:76065410-76065429 Msa1215030:CDS 35.0%
! CAGGATCAATCTAGAATTGA+CGG + chr8_1:76065753-76065772 Msa1215030:CDS 35.0%
! TTCACTGTATGTCTCTAGAA+GGG + chr8_1:76065796-76065815 Msa1215030:CDS 35.0%
CTTTAACAGCAAAGTTGAAG+CGG + chr8_1:76065869-76065888 Msa1215030:CDS 35.0%
!! AAAAAGCTTCTCTGAAATCG+TGG + chr8_1:76065906-76065925 Msa1215030:intron 35.0%
AGCAAACAAAATCATACCAC+AGG - chr8_1:76066160-76066179 None:intergenic 35.0%
!! GTTTGCTGTGTAATTAACAC+GGG + chr8_1:76066173-76066192 Msa1215030:intron 35.0%
! TTTGCTGTGTAATTAACACG+GGG + chr8_1:76066174-76066193 Msa1215030:intron 35.0%
TGTCATGTAGACATAGAGAT+AGG + chr8_1:76066227-76066246 Msa1215030:intron 35.0%
ACAACCAAATGTGTGACATT+AGG - chr8_1:76066331-76066350 None:intergenic 35.0%
! TAATGGACATGAACAGATTG+TGG + chr8_1:76066421-76066440 Msa1215030:intron 35.0%
CCAATTGAGATGTAAGAAGA+CGG - chr8_1:76066457-76066476 None:intergenic 35.0%
CTAGTTTCTTGAATGTCAAC+TGG + chr8_1:76066614-76066633 Msa1215030:intron 35.0%
TTCACTTATGATGAAGGCTT+TGG + chr8_1:76066679-76066698 Msa1215030:intron 35.0%
TCACTTATGATGAAGGCTTT+GGG + chr8_1:76066680-76066699 Msa1215030:intron 35.0%
AATTGCTATGATACTCGCAA+TGG + chr8_1:76066705-76066724 Msa1215030:intron 35.0%
ATTGCTATGATACTCGCAAT+GGG + chr8_1:76066706-76066725 Msa1215030:intron 35.0%
ACTTCTTGCCTCAATTAGTA+AGG - chr8_1:76066814-76066833 None:intergenic 35.0%
AGAAAGAAATGTTGTTGCTG+AGG + chr8_1:76066923-76066942 Msa1215030:CDS 35.0%
CAGAGTTAAAGCAAGCAATA+AGG - chr8_1:76066968-76066987 None:intergenic 35.0%
AGATTAAAGAAGCAGAAGAG+AGG + chr8_1:76067059-76067078 Msa1215030:CDS 35.0%
ATTGAAGTCGATGAATGAGA+GGG + chr8_1:76067235-76067254 Msa1215030:CDS 35.0%
GTCAGACTCAAATGGAATAA+AGG + chr8_1:76067413-76067432 Msa1215030:CDS 35.0%
AGACTCAAATGGAATAAAGG+AGG + chr8_1:76067416-76067435 Msa1215030:CDS 35.0%
GACTCAAATGGAATAAAGGA+GGG + chr8_1:76067417-76067436 Msa1215030:CDS 35.0%
AGCAAGAAAAACAGAAAGTC+TGG + chr8_1:76067483-76067502 Msa1215030:CDS 35.0%
ACGTATTCGAATTTATGGAC+TGG + chr8_1:76067541-76067560 Msa1215030:three_prime_UTR 35.0%
!!! GACTGGTTTAAGTTTTTGGA+GGG + chr8_1:76067558-76067577 Msa1215030:three_prime_UTR 35.0%
GATATGCATTAGAACACTCT+TGG - chr8_1:76067603-76067622 None:intergenic 35.0%
CAAAGCAAACAAGTTGCAAT+GGG - chr8_1:76067690-76067709 None:intergenic 35.0%
ACAAAGCAAACAAGTTGCAA+TGG - chr8_1:76067691-76067710 None:intergenic 35.0%
TTTCTCATTACTTCGAGCAT+CGG - chr8_1:76067753-76067772 None:intergenic 35.0%
TTGGGTCTGAATTGTGAATG+TGG - chr8_1:76062691-76062710 None:intergenic 40.0%
GGAGAAAGAATAACGCGTTT+GGG - chr8_1:76062709-76062728 None:intergenic 40.0%
CTCTGCGTTCTGTGAATTTA+GGG - chr8_1:76062834-76062853 None:intergenic 40.0%
AGAATTGGAATTAGGGAGAG+AGG - chr8_1:76062890-76062909 None:intergenic 40.0%
GGTGAGAGAGAATTGGAATT+AGG - chr8_1:76062898-76062917 None:intergenic 40.0%
TGAAGACGATCAAGATAGTG+GGG - chr8_1:76062985-76063004 None:intergenic 40.0%
GATGAAGACGATCAAGATAG+TGG - chr8_1:76062987-76063006 None:intergenic 40.0%
CCTGCTGAGGTAAGTAATAA+CGG + chr8_1:76063214-76063233 Msa1215030:intron 40.0%
CTGCTGAGGTAAGTAATAAC+GGG + chr8_1:76063215-76063234 Msa1215030:intron 40.0%
!! GAGGTAAGTAATAACGGGTT+TGG + chr8_1:76063220-76063239 Msa1215030:intron 40.0%
TTTGCTTTCCGTGGAATACT+CGG + chr8_1:76063861-76063880 Msa1215030:CDS 40.0%
TTCACATTCCGAGTATTCCA+CGG - chr8_1:76063872-76063891 None:intergenic 40.0%
CTGAGGTGATTATGATTGTG+TGG + chr8_1:76064032-76064051 Msa1215030:intron 40.0%
TGCGTATTCCACTTGTATCA+GGG - chr8_1:76064117-76064136 None:intergenic 40.0%
! CTTAGAGCATCATGGGTATT+AGG + chr8_1:76064283-76064302 Msa1215030:intron 40.0%
TCCCAAAGTGGATGGTATAA+AGG + chr8_1:76064604-76064623 Msa1215030:intron 40.0%
GCTCATGAGCTTAATATCCT+AGG - chr8_1:76064745-76064764 None:intergenic 40.0%
GCCAGAATGCATTGAATTTC+TGG + chr8_1:76064872-76064891 Msa1215030:intron 40.0%
CCCAGAAATTCAATGCATTC+TGG - chr8_1:76064876-76064895 None:intergenic 40.0%
! TCGTGACAAGGTATTCGAAT+TGG - chr8_1:76064907-76064926 None:intergenic 40.0%
! TTTCAAGTGAAGTCGTGACA+AGG - chr8_1:76064919-76064938 None:intergenic 40.0%
AAGTTGTTACCTTGACCATG+AGG - chr8_1:76064968-76064987 None:intergenic 40.0%
!!! GGTTTTATTGGTAATGCACG+TGG + chr8_1:76065277-76065296 Msa1215030:intron 40.0%
GTGGAACATTAGATGATGTC+TGG + chr8_1:76065409-76065428 Msa1215030:CDS 40.0%
GTCTGGGTTTGTATGATTTG+TGG + chr8_1:76065426-76065445 Msa1215030:CDS 40.0%
ATTTGTGGATTTGTCGGATG+TGG + chr8_1:76065441-76065460 Msa1215030:CDS 40.0%
CAGGGAAGACTTTAATGCTA+TGG + chr8_1:76065596-76065615 Msa1215030:intron 40.0%
AAGGACATGCTATTCAGCAT+TGG + chr8_1:76065643-76065662 Msa1215030:CDS 40.0%
! TTATGTCCATCGACTGAATC+AGG + chr8_1:76065734-76065753 Msa1215030:CDS 40.0%
ATTGATCCTGATTCAGTCGA+TGG - chr8_1:76065743-76065762 None:intergenic 40.0%
GTTCACTGTATGTCTCTAGA+AGG + chr8_1:76065795-76065814 Msa1215030:CDS 40.0%
! TCACTGTATGTCTCTAGAAG+GGG + chr8_1:76065797-76065816 Msa1215030:CDS 40.0%
!! TTCTCTGAAATCGTGGAGTT+AGG + chr8_1:76065913-76065932 Msa1215030:intron 40.0%
!! TCTCTGAAATCGTGGAGTTA+GGG + chr8_1:76065914-76065933 Msa1215030:intron 40.0%
CTATGTCTACATGACAGTAC+AGG - chr8_1:76066223-76066242 None:intergenic 40.0%
TGTTTACACATCACGTGTGA+CGG - chr8_1:76066297-76066316 None:intergenic 40.0%
ATGGCCTAATGTCACACATT+TGG + chr8_1:76066324-76066343 Msa1215030:intron 40.0%
CCGTCTTCTTACATCTCAAT+TGG + chr8_1:76066454-76066473 Msa1215030:CDS 40.0%
CATTCTGCCCTTAGGTTAAT+CGG + chr8_1:76067002-76067021 Msa1215030:intron 40.0%
TGAGCTTCCGATTAACCTAA+GGG - chr8_1:76067012-76067031 None:intergenic 40.0%
ATGAGCTTCCGATTAACCTA+AGG - chr8_1:76067013-76067032 None:intergenic 40.0%
AAGAAGCAGAAGAGAGGTAA+TGG + chr8_1:76067065-76067084 Msa1215030:intron 40.0%
CATTGAAGTCGATGAATGAG+AGG + chr8_1:76067234-76067253 Msa1215030:CDS 40.0%
ATACCTGTTCCTCCAAATCA+AGG - chr8_1:76067262-76067281 None:intergenic 40.0%
!!! CTGTTTTTCTTGCTGTTTCC+AGG - chr8_1:76067477-76067496 None:intergenic 40.0%
AAAACAGAAAGTCTGGTCGA+AGG + chr8_1:76067490-76067509 Msa1215030:CDS 40.0%
!!! GGACTGGTTTAAGTTTTTGG+AGG + chr8_1:76067557-76067576 Msa1215030:three_prime_UTR 40.0%
! TGCAACTTGTTTGCTTTGTG+TGG + chr8_1:76067692-76067711 Msa1215030:three_prime_UTR 40.0%
! GCAACTTGTTTGCTTTGTGT+GGG + chr8_1:76067693-76067712 Msa1215030:three_prime_UTR 40.0%
! CAACTTGTTTGCTTTGTGTG+GGG + chr8_1:76067694-76067713 Msa1215030:three_prime_UTR 40.0%
ATCAATGAGTAAGCCCTATC+CGG - chr8_1:76067729-76067748 None:intergenic 40.0%
! TAGAGTTCGTTTGGGTTTGG+CGG - chr8_1:76062625-76062644 None:intergenic 45.0%
CGGAGAAAGAATAACGCGTT+TGG - chr8_1:76062710-76062729 None:intergenic 45.0%
CCTCTGCGTTCTGTGAATTT+AGG - chr8_1:76062835-76062854 None:intergenic 45.0%
CCTAAATTCACAGAACGCAG+AGG + chr8_1:76062832-76062851 Msa1215030:CDS 45.0%
GAGAAGAGGTGAGAGAGAAT+TGG - chr8_1:76062905-76062924 None:intergenic 45.0%
ATTTGGTAGGAACGATGGGA+TGG + chr8_1:76063105-76063124 Msa1215030:intron 45.0%
! CAAGAAGTTTTCTCCTGCTG+AGG + chr8_1:76063201-76063220 Msa1215030:CDS 45.0%
CCGTTATTACTTACCTCAGC+AGG - chr8_1:76063217-76063236 None:intergenic 45.0%
TCGGAATGTGAAGAAGTTGC+TGG + chr8_1:76063880-76063899 Msa1215030:CDS 45.0%
CGGAATGTGAAGAAGTTGCT+GGG + chr8_1:76063881-76063900 Msa1215030:CDS 45.0%
ATTTCTGTACAACCAGCTGG+AGG - chr8_1:76063910-76063929 None:intergenic 45.0%
! GGTATTTCTGTACAACCAGC+TGG - chr8_1:76063913-76063932 None:intergenic 45.0%
! ACCAACATGTCCAGTTTGCT+TGG + chr8_1:76063930-76063949 Msa1215030:CDS 45.0%
! CCAACATGTCCAGTTTGCTT+GGG + chr8_1:76063931-76063950 Msa1215030:CDS 45.0%
TGAAACTCACCCAAGCAAAC+TGG - chr8_1:76063943-76063962 None:intergenic 45.0%
CCAAGATCCAAGCAAACAGA+GGG - chr8_1:76063983-76064002 None:intergenic 45.0%
ACCAAGATCCAAGCAAACAG+AGG - chr8_1:76063984-76064003 None:intergenic 45.0%
CGCTGTCTTCAATTTCTCTG+AGG + chr8_1:76064015-76064034 Msa1215030:intron 45.0%
TGTTTGAATCCCAGAGAGAC+TGG + chr8_1:76064090-76064109 Msa1215030:intron 45.0%
GTGCGTATTCCACTTGTATC+AGG - chr8_1:76064118-76064137 None:intergenic 45.0%
!! CGCAAGGGCATTGAAATGAA+TGG - chr8_1:76064153-76064172 None:intergenic 45.0%
!! ATGTCCACTTTGAGACGCAA+GGG - chr8_1:76064168-76064187 None:intergenic 45.0%
!! TATGTCCACTTTGAGACGCA+AGG - chr8_1:76064169-76064188 None:intergenic 45.0%
GTGGACATATTTGTCTTGCC+AGG + chr8_1:76064180-76064199 Msa1215030:CDS 45.0%
AAAAGATGCAACATGGGCGA+TGG + chr8_1:76064689-76064708 Msa1215030:intron 45.0%
AAAGATGCAACATGGGCGAT+GGG + chr8_1:76064690-76064709 Msa1215030:intron 45.0%
ACATGGGCGATGGGAAAAAA+TGG + chr8_1:76064699-76064718 Msa1215030:intron 45.0%
TGTTACCTTGACCATGAGGA+GGG - chr8_1:76064964-76064983 None:intergenic 45.0%
TTGTTACCTTGACCATGAGG+AGG - chr8_1:76064965-76064984 None:intergenic 45.0%
ACAAGGAAGGGCGGAAATTA+AGG + chr8_1:76065116-76065135 Msa1215030:intron 45.0%
! TGCTTCGCTAACAAAAGCAC+TGG + chr8_1:76065256-76065275 Msa1215030:intron 45.0%
! CTGCCGATTATGTCAACAAC+AGG + chr8_1:76065362-76065381 Msa1215030:CDS 45.0%
TAGAATTGACGGCAAGTCGA+AGG + chr8_1:76065764-76065783 Msa1215030:CDS 45.0%
TTGAAGCGGTATGTTTCTCG+TGG + chr8_1:76065883-76065902 Msa1215030:intron 45.0%
AGCGACAAGCTCACTTTAAG+TGG + chr8_1:76066044-76066063 Msa1215030:intron 45.0%
AAATCATACCACAGGTGCAC+AGG - chr8_1:76066152-76066171 None:intergenic 45.0%
! AACACGGGGCTTTATGCATA+AGG + chr8_1:76066188-76066207 Msa1215030:intron 45.0%
CTTCTCCACTGCTTCAGATA+CGG - chr8_1:76066850-76066869 None:intergenic 45.0%
AGACACTTCATTCTGCCCTT+AGG + chr8_1:76066994-76067013 Msa1215030:intron 45.0%
GAATGAGAGGGTCCTTGATT+TGG + chr8_1:76067247-76067266 Msa1215030:CDS 45.0%
!! TTCTTGCTGTTTCCAGGAGA+AGG - chr8_1:76067471-76067490 None:intergenic 45.0%
TTTCCTGTGGCAGTTAAGTC+AGG - chr8_1:76067642-76067661 None:intergenic 45.0%
!!! AGGTGGGCTAATTTTTCCTG+TGG - chr8_1:76067655-76067674 None:intergenic 45.0%
TGGGAGCTGAAATGTAAGGT+GGG - chr8_1:76067671-76067690 None:intergenic 45.0%
ATGGGAGCTGAAATGTAAGG+TGG - chr8_1:76067672-76067691 None:intergenic 45.0%
GCAATGGGAGCTGAAATGTA+AGG - chr8_1:76067675-76067694 None:intergenic 45.0%
TCAATGAGTAAGCCCTATCC+GGG - chr8_1:76067728-76067747 None:intergenic 45.0%
TTCCTTCCTTCCTTGTGCAG+TGG + chr8_1:76062577-76062596 Msa1215030:five_prime_UTR 50.0%
TACCACTGCACAAGGAAGGA+AGG - chr8_1:76062582-76062601 None:intergenic 50.0%
CAACTACCACTGCACAAGGA+AGG - chr8_1:76062586-76062605 None:intergenic 50.0%
CTTCCTTGTGCAGTGGTAGT+TGG + chr8_1:76062584-76062603 Msa1215030:five_prime_UTR 50.0%
GTTCCAACTACCACTGCACA+AGG - chr8_1:76062590-76062609 None:intergenic 50.0%
! AGAGTTCGTTTGGGTTTGGC+GGG - chr8_1:76062624-76062643 None:intergenic 50.0%
AAGATGAGTTCGGGATCGAG+TGG - chr8_1:76062784-76062803 None:intergenic 50.0%
TGGAGCGGAGAAGATGAGTT+CGG - chr8_1:76062794-76062813 None:intergenic 50.0%
!! TTCTTGGGATTGGGTTGGAG+CGG - chr8_1:76062809-76062828 None:intergenic 50.0%
! GGGTTTTCTTGGGATTGGGT+TGG - chr8_1:76062814-76062833 None:intergenic 50.0%
ACAGCGAGGATGAAGAGAAG+AGG - chr8_1:76062919-76062938 None:intergenic 50.0%
GGAACGATGGGATGGAAGAT+AGG + chr8_1:76063113-76063132 Msa1215030:intron 50.0%
CCCAAGCAAACTGGACATGT+TGG - chr8_1:76063934-76063953 None:intergenic 50.0%
ATCGTGACCCTCTGTTTGCT+TGG + chr8_1:76063973-76063992 Msa1215030:intron 50.0%
CCCTCTGTTTGCTTGGATCT+TGG + chr8_1:76063980-76063999 Msa1215030:intron 50.0%
TATCAGGGTCCAGTCTCTCT+GGG - chr8_1:76064102-76064121 None:intergenic 50.0%
AGACTGGACCCTGATACAAG+TGG + chr8_1:76064106-76064125 Msa1215030:CDS 50.0%
AATGCCCTTGCGTCTCAAAG+TGG + chr8_1:76064161-76064180 Msa1215030:CDS 50.0%
GAATGGGGAAGCTACATACC+TGG - chr8_1:76064201-76064220 None:intergenic 50.0%
!! TCAATGCATTCTGGCTCGCT+TGG - chr8_1:76064867-76064886 None:intergenic 50.0%
TTACCTTGACCATGAGGAGG+GGG - chr8_1:76064962-76064981 None:intergenic 50.0%
GTTACCTTGACCATGAGGAG+GGG - chr8_1:76064963-76064982 None:intergenic 50.0%
GTGGATTTGTCGGATGTGGA+AGG + chr8_1:76065445-76065464 Msa1215030:CDS 50.0%
AACAAAAGCCTGTGCACCTG+TGG + chr8_1:76066141-76066160 Msa1215030:intron 50.0%
! AAGCTCCGTATCTGAAGCAG+TGG + chr8_1:76066842-76066861 Msa1215030:CDS 50.0%
! CGTATCTGAAGCAGTGGAGA+AGG + chr8_1:76066848-76066867 Msa1215030:CDS 50.0%
!! TGAGAGGGTCCTTGATTTGG+AGG + chr8_1:76067250-76067269 Msa1215030:CDS 50.0%
!! GGTCCTTGATTTGGAGGAAC+AGG + chr8_1:76067256-76067275 Msa1215030:CDS 50.0%
ACAGAAAGTCTGGTCGAAGG+CGG + chr8_1:76067493-76067512 Msa1215030:CDS 50.0%
GTACCTGACTTAACTGCCAC+AGG + chr8_1:76067636-76067655 Msa1215030:three_prime_UTR 50.0%
TTGTGTGGGGATGTAATCCC+CGG + chr8_1:76067707-76067726 Msa1215030:three_prime_UTR 50.0%
CAATGAGTAAGCCCTATCCG+GGG - chr8_1:76067727-76067746 None:intergenic 50.0%
GTGGACTCGGAGGAAGAACA+TGG - chr8_1:76062743-76062762 None:intergenic 55.0%
! GATTCTCGTCGTCGACTGAG+TGG - chr8_1:76062762-76062781 None:intergenic 55.0%
GGAGCGGAGAAGATGAGTTC+GGG - chr8_1:76062793-76062812 None:intergenic 55.0%
! GAGAGGAGTGTGAAGCGCTT+CGG - chr8_1:76062873-76062892 None:intergenic 55.0%
GTATCAGGGTCCAGTCTCTC+TGG - chr8_1:76064103-76064122 None:intergenic 55.0%
TACCTTGACCATGAGGAGGG+GGG - chr8_1:76064961-76064980 None:intergenic 55.0%
GTGGAGAAGGCTGCAACTTC+TGG + chr8_1:76066861-76066880 Msa1215030:CDS 55.0%
GGAGGGAACAGTCTTACCAG+TGG + chr8_1:76067434-76067453 Msa1215030:CDS 55.0%
GAAGGTTGCTCATGAGCCAC+TGG - chr8_1:76067453-76067472 None:intergenic 55.0%
GCTCATGAGCAACCTTCTCC+TGG + chr8_1:76067456-76067475 Msa1215030:CDS 55.0%
TGGGGATGTAATCCCCGGAT+AGG + chr8_1:76067712-76067731 Msa1215030:three_prime_UTR 55.0%
GGGGATGTAATCCCCGGATA+GGG + chr8_1:76067713-76067732 Msa1215030:three_prime_UTR 55.0%
! CGTCGTCGACTGAGTGGACT+CGG - chr8_1:76062756-76062775 None:intergenic 60.0%
GGCTGCAACTTCTGGCATGC+TGG + chr8_1:76066869-76066888 Msa1215030:CDS 60.0%
! CGTCGACTGAGTGGACTCGG+AGG - chr8_1:76062753-76062772 None:intergenic 65.0%
GTTGCTGGGACTCCTCCAGC+TGG + chr8_1:76063895-76063914 Msa1215030:CDS 65.0%
! AGGAGGGGGGTGCAAAGGCA+AGG - chr8_1:76064948-76064967 None:intergenic 65.0%
! CCATGAGGAGGGGGGTGCAA+AGG - chr8_1:76064953-76064972 None:intergenic 65.0%
CCTTTGCACCCCCCTCCTCA+TGG + chr8_1:76064950-76064969 Msa1215030:intron 65.0%
CACCCCCCTCCTCATGGTCA+AGG + chr8_1:76064956-76064975 Msa1215030:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 76062570 76067930 76062570 ID=Msa1215030;Name=Msa1215030
chr8_1 mRNA 76062570 76067930 76062570 ID=Msa1215030-mRNA-1;Parent=Msa1215030;Name=Msa1215030-mRNA-1;_AED=0.07;_eAED=0.07;_QI=172|1|1|1|1|1|11|409|480
chr8_1 exon 76062570 76063022 76062570 ID=Msa1215030-mRNA-1:exon:26094;Parent=Msa1215030-mRNA-1
chr8_1 exon 76063114 76063222 76063114 ID=Msa1215030-mRNA-1:exon:26095;Parent=Msa1215030-mRNA-1
chr8_1 exon 76063838 76063952 76063838 ID=Msa1215030-mRNA-1:exon:26096;Parent=Msa1215030-mRNA-1
chr8_1 exon 76064104 76064201 76064104 ID=Msa1215030-mRNA-1:exon:26097;Parent=Msa1215030-mRNA-1
chr8_1 exon 76065360 76065466 76065360 ID=Msa1215030-mRNA-1:exon:26098;Parent=Msa1215030-mRNA-1
chr8_1 exon 76065635 76065890 76065635 ID=Msa1215030-mRNA-1:exon:26099;Parent=Msa1215030-mRNA-1
chr8_1 exon 76066437 76066490 76066437 ID=Msa1215030-mRNA-1:exon:26100;Parent=Msa1215030-mRNA-1
chr8_1 exon 76066801 76066944 76066801 ID=Msa1215030-mRNA-1:exon:26101;Parent=Msa1215030-mRNA-1
chr8_1 exon 76067016 76067080 76067016 ID=Msa1215030-mRNA-1:exon:26102;Parent=Msa1215030-mRNA-1
chr8_1 exon 76067223 76067277 76067223 ID=Msa1215030-mRNA-1:exon:26103;Parent=Msa1215030-mRNA-1
chr8_1 exon 76067363 76067930 76067363 ID=Msa1215030-mRNA-1:exon:26104;Parent=Msa1215030-mRNA-1
chr8_1 five_prime_UTR 76062570 76062741 76062570 ID=Msa1215030-mRNA-1:five_prime_utr;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76062742 76063022 76062742 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76063114 76063222 76063114 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76063838 76063952 76063838 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76064104 76064201 76064104 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76065360 76065466 76065360 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76065635 76065890 76065635 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76066437 76066490 76066437 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76066801 76066944 76066801 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76067016 76067080 76067016 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76067223 76067277 76067223 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 CDS 76067363 76067521 76067363 ID=Msa1215030-mRNA-1:cds;Parent=Msa1215030-mRNA-1
chr8_1 three_prime_UTR 76067522 76067930 76067522 ID=Msa1215030-mRNA-1:three_prime_utr;Parent=Msa1215030-mRNA-1
Gene Sequence

>Msa1215030

ATGTTCTTCCTCCGAGTCCACTCAGTCGACGACGAGAATCCACTCGATCCCGAACTCATCTTCTCCGCTCCAACCCAATCCCAAGAAAACCCTAAATTCACAGAACGCAGAGGCGTTCTTCATCTCTTCCGAAGCGCTTCACACTCCTCTCTCCCTAATTCCAATTCTCTCTCACCTCTTCTCTTCATCCTCGCTGTTCCTAATTATTTCTCCTTCGATGATTTCATTCGGTTTTGTGGTCCCCACTATCTTGATCGTCTTCATCATCTTCTCTTCATCAGGAACGATGGGATGGAAGATAGGTATAGTGTTTTGATTAGGTTTGATGATCAGCTTGCTGCTGATGCATTTCATACCTATTTCAATGGCAAGAAGTTTTCTCCTGCTGAGGCAGAGATATGCCATATTTTATTTTTGCTTTCCGTGGAATACTCGGAATGTGAAGAAGTTGCTGGGACTCCTCCAGCTGGTTGTACAGAAATACCAACATGTCCAGTTTGCTTGGAGAGACTGGACCCTGATACAAGTGGAATACGCACAACACTTTGTGACCATTCATTTCAATGCCCTTGCGTCTCAAAGTGGACATATTTGTCTTGCCAGGTCTGCCGATTATGTCAACAACAGGATGAGAAGCCAACTTGTTTTATTTGTGGAACATTAGATGATGTCTGGGTTTGTATGATTTGTGGATTTGTCGGATGTGGAAGATATAAAGAAGGACATGCTATTCAGCATTGGAAAGATACTCAGCATTGCTATTCTCTTGATTTTAGAACACAACAAATTTGGGATTATGTGGGTGACAATTATGTCCATCGACTGAATCAGGATCAATCTAGAATTGACGGCAAGTCGAAGGAGATGCATGTTCACTGTATGTCTCTAGAAGGGGATTGTGACACATGTGAATGTAGTGAAGATTTAGAAGTTAATGGGGCCTTCTTTAACAGCAAAGTTGAAGCGATTGTGGATGAATACAACCGTCTTCTTACATCTCAATTGGAGACTCAAAGACAATATTATGAATCCTTACTAATTGAGGCAAGAAGTAAAGAAGAAAGCTCCGTATCTGAAGCAGTGGAGAAGGCTGCAACTTCTGGCATGCTGGATATCCAAAATGAACTAGAAAAGTGTACAGAAGAAAGAAATGTTGTTGCTGAGGTTAATCGGAAGCTCATTAAAAATTCAGAAATGTGGCGAAAGAAGATTAAAGAAGCAGAAGAGAGGGAAGCTACATCATTGAAGTCGATGAATGAGAGGGTCCTTGATTTGGAGGAACAGATAAGAGATATCACGATTTTTCTACAAGCACAAAAAACAATTGATAAAATGTCAGACTCAAATGGAATAAAGGAGGGAACAGTCTTACCAGTGGCTCATGAGCAACCTTCTCCTGGAAACAGCAAGAAAAACAGAAAGTCTGGTCGAAGGCGGCGTTAG

Protein sequence

>Msa1215030

MFFLRVHSVDDENPLDPELIFSAPTQSQENPKFTERRGVLHLFRSASHSSLPNSNSLSPLLFILAVPNYFSFDDFIRFCGPHYLDRLHHLLFIRNDGMEDRYSVLIRFDDQLAADAFHTYFNGKKFSPAEAEICHILFLLSVEYSECEEVAGTPPAGCTEIPTCPVCLERLDPDTSGIRTTLCDHSFQCPCVSKWTYLSCQVCRLCQQQDEKPTCFICGTLDDVWVCMICGFVGCGRYKEGHAIQHWKDTQHCYSLDFRTQQIWDYVGDNYVHRLNQDQSRIDGKSKEMHVHCMSLEGDCDTCECSEDLEVNGAFFNSKVEAIVDEYNRLLTSQLETQRQYYESLLIEARSKEESSVSEAVEKAATSGMLDIQNELEKCTEERNVVAEVNRKLIKNSEMWRKKIKEAEEREATSLKSMNERVLDLEEQIRDITIFLQAQKTIDKMSDSNGIKEGTVLPVAHEQPSPGNSKKNRKSGRRRR*