Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221210 | XP_003610136.1 | 98.208 | 279 | 5 | 0 | 1 | 279 | 1 | 279 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221210 | sp|Q10S27|VDAC6_ORYSJ | 58.423 | 279 | 113 | 3 | 1 | 279 | 1 | 276 | 3.61e-118 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020870 | Msa1221210 | 0.820804 | 5.650526e-53 | -8.615850e-47 |
| Msa0612840 | Msa1221210 | 0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0996830 | Msa1221210 | 0.828687 | 7.825521e-55 | -8.615850e-47 |
| Msa0304270 | Msa1221210 | 0.817595 | 3.039043e-52 | -8.615850e-47 |
| Msa1119970 | Msa1221210 | 0.805327 | 1.408335e-49 | -8.615850e-47 |
| Msa1221210 | Msa1265340 | 0.815413 | 9.364990e-52 | -8.615850e-47 |
| Msa1221210 | Msa1358860 | 0.857292 | 1.802542e-62 | -8.615850e-47 |
| Msa0494620 | Msa1221210 | 0.800332 | 1.514658e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221210 | MtrunA17_Chr4g0072511 | 98.208 | 279 | 5 | 0 | 1 | 279 | 1 | 279 | 0.0 | 557 |
| Msa1221210 | MtrunA17_Chr6g0452811 | 45.552 | 281 | 148 | 3 | 1 | 279 | 1 | 278 | 7.48e-79 | 240 |
| Msa1221210 | MtrunA17_Chr7g0216561 | 42.806 | 278 | 156 | 2 | 2 | 279 | 3 | 277 | 1.74e-76 | 234 |
| Msa1221210 | MtrunA17_Chr5g0401201 | 43.369 | 279 | 155 | 2 | 1 | 279 | 1 | 276 | 5.39e-76 | 233 |
| Msa1221210 | MtrunA17_Chr8g0362621 | 41.577 | 279 | 160 | 2 | 1 | 279 | 1 | 276 | 5.82e-73 | 225 |
| Msa1221210 | MtrunA17_Chr1g0152591 | 39.928 | 278 | 164 | 2 | 2 | 279 | 3 | 277 | 3.78e-67 | 210 |
| Msa1221210 | MtrunA17_Chr4g0060181 | 25.430 | 291 | 158 | 6 | 1 | 279 | 1 | 244 | 1.83e-22 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221210 | AT5G57490.1 | 58.065 | 279 | 112 | 3 | 1 | 279 | 1 | 274 | 8.86e-111 | 321 |
| Msa1221210 | AT5G15090.1 | 44.086 | 279 | 151 | 4 | 1 | 279 | 1 | 274 | 8.12e-77 | 235 |
| Msa1221210 | AT5G15090.2 | 44.086 | 279 | 151 | 4 | 1 | 279 | 1 | 274 | 8.12e-77 | 235 |
| Msa1221210 | AT5G67500.3 | 44.086 | 279 | 153 | 3 | 1 | 279 | 1 | 276 | 8.37e-77 | 235 |
| Msa1221210 | AT3G01280.1 | 43.011 | 279 | 156 | 2 | 1 | 279 | 1 | 276 | 8.21e-74 | 227 |
| Msa1221210 | AT5G67500.1 | 43.284 | 268 | 150 | 2 | 1 | 268 | 1 | 266 | 5.70e-72 | 223 |
| Msa1221210 | AT5G67500.2 | 40.523 | 306 | 152 | 4 | 1 | 279 | 1 | 303 | 1.31e-71 | 223 |
| Msa1221210 | AT3G49920.1 | 32.258 | 279 | 136 | 4 | 1 | 279 | 1 | 226 | 1.67e-40 | 140 |
| Msa1221210 | AT3G49920.2 | 43.011 | 93 | 51 | 1 | 1 | 93 | 1 | 91 | 1.84e-16 | 74.3 |
| Msa1221210 | AT3G49920.4 | 43.011 | 93 | 51 | 1 | 1 | 93 | 1 | 91 | 1.84e-16 | 74.3 |
| Msa1221210 | AT3G49920.3 | 45.679 | 81 | 44 | 0 | 1 | 81 | 1 | 81 | 1.50e-15 | 71.2 |
Find 111 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTGAATGATTACAATTT+AGG | 0.210677 | 8_1:-84755739 | Msa1221210:three_prime_UTR |
| TTGATAGGCAAACCAGTTTA+AGG | 0.228425 | 8_1:+84756157 | None:intergenic |
| GATAGGGTTATGAGTGAATT+TGG | 0.233277 | 8_1:+84756247 | None:intergenic |
| CAGACTACAAGCATGTTTCT+TGG | 0.237224 | 8_1:-84755556 | Msa1221210:three_prime_UTR |
| TTGTACTGCCATTCTATATC+TGG | 0.249506 | 8_1:-84755931 | Msa1221210:three_prime_UTR |
| ATTGGTTCACCTGCCAAATT+TGG | 0.260825 | 8_1:-84756199 | Msa1221210:CDS |
| GGTTTAGTTCTCATTCATTA+TGG | 0.299570 | 8_1:-84760672 | Msa1221210:exon |
| TGGAAGCAAAGATATATCTA+TGG | 0.346298 | 8_1:-84757886 | Msa1221210:CDS |
| GCAGCAACTGTTAATCCATC+TGG | 0.352067 | 8_1:+84756409 | None:intergenic |
| CTATATCTGGCATGAGTTAT+GGG | 0.353848 | 8_1:-84755918 | Msa1221210:three_prime_UTR |
| TTTCCTAGTGATTCATGGTC+AGG | 0.356865 | 8_1:-84755884 | Msa1221210:three_prime_UTR |
| AGAGAGAGCGAGACCAAATT+TGG | 0.357430 | 8_1:+84756186 | None:intergenic |
| TCTATATCTGGCATGAGTTA+TGG | 0.364474 | 8_1:-84755919 | Msa1221210:three_prime_UTR |
| ACAAATTATACTGATTCCTT+TGG | 0.365877 | 8_1:+84756034 | None:intergenic |
| CTCTCTCTCAAGCCTTAAAC+TGG | 0.367778 | 8_1:-84756169 | Msa1221210:exon |
| CTGAGAACAGATTTACCTTT+GGG | 0.368712 | 8_1:-84756360 | Msa1221210:CDS |
| GCAGCTATTGATTCAAGTAT+TGG | 0.376139 | 8_1:-84757948 | Msa1221210:CDS |
| TGGAGTCATACTCGGCAGAT+AGG | 0.385640 | 8_1:+84756230 | None:intergenic |
| TTGGAGCTTTCTGCTGCAAT+TGG | 0.386691 | 8_1:-84757906 | Msa1221210:CDS |
| GGACACCGGGTAAATAAAAC+TGG | 0.387694 | 8_1:-84755535 | None:intergenic |
| TGTTTATGCAGGGCTGATAA+AGG | 0.390368 | 8_1:-84756472 | Msa1221210:intron |
| ATAAGTGTTGCAGAGAAATC+TGG | 0.396923 | 8_1:+84757792 | None:intergenic |
| CTTGAACCCAGCCCCTCAAT+TGG | 0.403062 | 8_1:-84757925 | Msa1221210:CDS |
| GCCTCCACGCTCGTTGGCAT+TGG | 0.411252 | 8_1:+84756269 | None:intergenic |
| TTCTGTAGATGAAGTGTTGA+AGG | 0.412529 | 8_1:+84755778 | None:intergenic |
| TCTTTAACCCTGTGGCTGTA+AGG | 0.413704 | 8_1:+84759088 | None:intergenic |
| TCTGAGAACAGATTTACCTT+TGG | 0.415880 | 8_1:-84756361 | Msa1221210:CDS |
| AGTAGATGAGGTGCTGGAGA+TGG | 0.418675 | 8_1:-84755684 | Msa1221210:three_prime_UTR |
| GAAAGCTCCAATTGAGGGGC+TGG | 0.425247 | 8_1:+84757918 | None:intergenic |
| AGAGAAATCTGGTTTATTGA+AGG | 0.430478 | 8_1:+84757803 | None:intergenic |
| CAAGAAACATGCTTGTAGTC+TGG | 0.432639 | 8_1:+84755557 | None:intergenic |
| AAACATCCCACCAGGGGTAA+TGG | 0.433340 | 8_1:+84756083 | None:intergenic |
| TGGTTTATTGAAGGCAATCC+CGG | 0.439965 | 8_1:+84757812 | None:intergenic |
| TACATTGTTGCCATTACCCC+TGG | 0.440757 | 8_1:-84756093 | Msa1221210:three_prime_UTR |
| ATAGAATGATAAACCACAAT+TGG | 0.444320 | 8_1:+84755802 | None:intergenic |
| ACCTTTCCTGACTTGTGATC+GGG | 0.446241 | 8_1:+84758643 | None:intergenic |
| TTAAGCCCTCTCATATCATA+AGG | 0.449304 | 8_1:-84756061 | Msa1221210:three_prime_UTR |
| AATAAGAGTAGATGAGGTGC+TGG | 0.451619 | 8_1:-84755690 | Msa1221210:three_prime_UTR |
| CACCTTTCCTGACTTGTGAT+CGG | 0.452824 | 8_1:+84758642 | None:intergenic |
| ATTACCAATCCAGTGGAACT+TGG | 0.458092 | 8_1:+84759958 | None:intergenic |
| AAGACTCGATTCAGCGATGA+TGG | 0.459917 | 8_1:-84756304 | Msa1221210:CDS |
| ATATCTATGGGTGCTGAAGT+TGG | 0.460121 | 8_1:-84757873 | Msa1221210:CDS |
| ACGGAGTTTCTCACTGTTTG+CGG | 0.461264 | 8_1:+84760838 | None:intergenic |
| GGCATCTTACATTCATTATG+TGG | 0.465201 | 8_1:-84756437 | Msa1221210:CDS |
| GATTCCAAGTTCCACTGGAT+TGG | 0.477100 | 8_1:-84759962 | Msa1221210:intron |
| GTCGTTGAATAAGATTTGAT+AGG | 0.482815 | 8_1:+84756142 | None:intergenic |
| AACAATGTAAAATGATAGAA+TGG | 0.482971 | 8_1:+84756107 | None:intergenic |
| AATATACCCGATCACAAGTC+AGG | 0.484667 | 8_1:-84758649 | Msa1221210:CDS |
| GAAATCTTCTAAAGCGGCAC+AGG | 0.485610 | 8_1:-84756011 | Msa1221210:three_prime_UTR |
| CATTCTCAAAATATAATGCC+GGG | 0.487500 | 8_1:-84757830 | Msa1221210:CDS |
| CAAGCATGTTTCTTGGACAC+CGG | 0.487657 | 8_1:-84755549 | Msa1221210:three_prime_UTR |
| ATTCATGGTCAGGTGAATAG+TGG | 0.489953 | 8_1:-84755874 | Msa1221210:three_prime_UTR |
| GCCTGCAGACCTCTTGTACA+AGG | 0.492635 | 8_1:-84760016 | Msa1221210:intron |
| CGGCGGCGACGACGAAGTCC+TGG | 0.495174 | 8_1:+84760858 | None:intergenic |
| TTCTCATTCATTATGGCTAA+CGG | 0.496771 | 8_1:-84760665 | Msa1221210:exon |
| CAGCAGAAAGCTCCAATTGA+GGG | 0.498390 | 8_1:+84757913 | None:intergenic |
| CTTCTCATATGAACCAATTG+TGG | 0.508962 | 8_1:-84755815 | Msa1221210:three_prime_UTR |
| GGAGTCATACTCGGCAGATA+GGG | 0.510982 | 8_1:+84756231 | None:intergenic |
| TCATTCTCAAAATATAATGC+CGG | 0.512651 | 8_1:-84757831 | Msa1221210:CDS |
| TTACAGGGCCTTACAGCCAC+AGG | 0.513580 | 8_1:-84759096 | Msa1221210:intron |
| AACTCATGCCAGATATAGAA+TGG | 0.518821 | 8_1:+84755923 | None:intergenic |
| CCACGCTCGTTGGCATTGGA+AGG | 0.521657 | 8_1:+84756273 | None:intergenic |
| CCTTCCAATGCCAACGAGCG+TGG | 0.522608 | 8_1:-84756273 | Msa1221210:CDS |
| CCAATCTCAGAAAACGGTGC+TGG | 0.527039 | 8_1:+84760641 | None:intergenic |
| TGTATCAGAAACGAGTAGCC+AGG | 0.531157 | 8_1:-84760876 | Msa1221210:five_prime_UTR |
| AGAGCGAGACCAAATTTGGC+AGG | 0.535679 | 8_1:+84756190 | None:intergenic |
| CAGTGGAACTTGGAATCGAC+AGG | 0.536873 | 8_1:+84759968 | None:intergenic |
| AAAGCTCCAATTGAGGGGCT+GGG | 0.537060 | 8_1:+84757919 | None:intergenic |
| CTGTCGATTCCAAGTTCCAC+TGG | 0.545124 | 8_1:-84759967 | Msa1221210:CDS |
| ATTGTTGCCATTACCCCTGG+TGG | 0.548194 | 8_1:-84756090 | Msa1221210:three_prime_UTR |
| TTAAACACGCTTTACAAGAG+TGG | 0.548418 | 8_1:-84759042 | Msa1221210:CDS |
| CATTATGTGGACCGCCCAGA+TGG | 0.549135 | 8_1:-84756424 | Msa1221210:CDS |
| GGTAAATCTGTTCTCAGAAG+AGG | 0.550061 | 8_1:+84756366 | None:intergenic |
| TTACAGCCACAGGGTTAAAG+AGG | 0.550287 | 8_1:-84759086 | Msa1221210:CDS |
| ATTTGTGAAATCTTCTAAAG+CGG | 0.550399 | 8_1:-84756017 | Msa1221210:three_prime_UTR |
| GGAAGCAAAGATATATCTAT+GGG | 0.558456 | 8_1:-84757885 | Msa1221210:CDS |
| CAGCAACTGTTAATCCATCT+GGG | 0.562264 | 8_1:+84756410 | None:intergenic |
| AATTATAGTCCTTGTACAAG+AGG | 0.562661 | 8_1:+84760007 | None:intergenic |
| GCAGCAGAAAGCTCCAATTG+AGG | 0.563516 | 8_1:+84757912 | None:intergenic |
| GTTTACCTTATGATATGAGA+GGG | 0.563723 | 8_1:+84756056 | None:intergenic |
| GGTTTACCTTATGATATGAG+AGG | 0.564392 | 8_1:+84756055 | None:intergenic |
| TTGCTGCTGAACTCGCTCAC+AGG | 0.569987 | 8_1:-84756393 | Msa1221210:CDS |
| AAGCATGTTTCTTGGACACC+GGG | 0.581324 | 8_1:-84755548 | Msa1221210:three_prime_UTR |
| AGTATGAATAAGAGTAGATG+AGG | 0.588597 | 8_1:-84755696 | Msa1221210:three_prime_UTR |
| AAATCTTCTAAAGCGGCACA+GGG | 0.589240 | 8_1:-84756010 | Msa1221210:three_prime_UTR |
| AATTTGGCCTCCACGCTCGT+TGG | 0.596800 | 8_1:+84756263 | None:intergenic |
| AGGGCTTAAAACATCCCACC+AGG | 0.602480 | 8_1:+84756075 | None:intergenic |
| GAGATTGGCAAAAGAGCAAG+AGG | 0.602548 | 8_1:-84760626 | Msa1221210:intron |
| GTGCTGGAGATGGATTCATA+TGG | 0.603961 | 8_1:-84755674 | Msa1221210:three_prime_UTR |
| TCACCTGACCATGAATCACT+AGG | 0.604045 | 8_1:+84755881 | None:intergenic |
| CTTGTAGTCTGGAACTGCAA+AGG | 0.604582 | 8_1:+84755568 | None:intergenic |
| TTGTTGCCATTACCCCTGGT+GGG | 0.614104 | 8_1:-84756089 | Msa1221210:three_prime_UTR |
| TGATAAAGGACAGTCTCTGA+AGG | 0.622839 | 8_1:-84756458 | Msa1221210:CDS |
| GAATCGACAGGCTAAACTTG+TGG | 0.624169 | 8_1:+84759980 | None:intergenic |
| TATTAACTGTGAGGTCCCAA+AGG | 0.625879 | 8_1:+84756345 | None:intergenic |
| ACCCGATCACAAGTCAGGAA+AGG | 0.634719 | 8_1:-84758644 | Msa1221210:intron |
| TTGATCCCTCTTTAACCCTG+TGG | 0.639663 | 8_1:+84759080 | None:intergenic |
| GGCTTAAAACATCCCACCAG+GGG | 0.642117 | 8_1:+84756077 | None:intergenic |
| TACAGGGCCTTACAGCCACA+GGG | 0.642664 | 8_1:-84759095 | Msa1221210:intron |
| CATATCATAAGGTAAACCAA+AGG | 0.646778 | 8_1:-84756050 | Msa1221210:three_prime_UTR |
| GAGTTTCTCACTGTTTGCGG+CGG | 0.647632 | 8_1:+84760841 | None:intergenic |
| CTTGAATCAATAGCTGCATG+AGG | 0.648302 | 8_1:+84757954 | None:intergenic |
| TCCAATGCCAACGAGCGTGG+AGG | 0.648958 | 8_1:-84756270 | Msa1221210:CDS |
| AGCAGAAAGCTCCAATTGAG+GGG | 0.649829 | 8_1:+84757914 | None:intergenic |
| TACAGCCACAGGGTTAAAGA+GGG | 0.657577 | 8_1:-84759085 | Msa1221210:CDS |
| TTTCTGATACAATAGCAAAG+TGG | 0.674259 | 8_1:+84760888 | None:intergenic |
| AGGTGAATAGTGGAAGTCTG+AGG | 0.681497 | 8_1:-84755864 | Msa1221210:three_prime_UTR |
| GGTAAGAATTACCAATCCAG+TGG | 0.685271 | 8_1:+84759951 | None:intergenic |
| GGGCTTAAAACATCCCACCA+GGG | 0.701922 | 8_1:+84756076 | None:intergenic |
| AATCTTCTAAAGCGGCACAG+GGG | 0.785013 | 8_1:-84756009 | Msa1221210:three_prime_UTR |
| CAACTGTTAATCCATCTGGG+CGG | 0.787246 | 8_1:+84756413 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAACTTAATCAAAATATTT+TGG | + | chr8_1:84756191-84756210 | None:intergenic | 10.0% |
| !!! | AATTTTCTAAAATATATTGA+TGG | - | chr8_1:84756413-84756432 | Msa1221210:CDS | 10.0% |
| !! | TTTATTTGTTTAAGAAAAAA+AGG | + | chr8_1:84759582-84759601 | None:intergenic | 10.0% |
| !! | AAATTCAAATGTGATATAAT+GGG | + | chr8_1:84756398-84756417 | None:intergenic | 15.0% |
| !! | AAAATTCAAATGTGATATAA+TGG | + | chr8_1:84756399-84756418 | None:intergenic | 15.0% |
| !! | TTATCATATATGTTAAACAT+TGG | - | chr8_1:84756983-84757002 | Msa1221210:intron | 15.0% |
| !! | TTATAAAATCAACTTTATCA+AGG | + | chr8_1:84757144-84757163 | None:intergenic | 15.0% |
| !!! | TTTTTAATGTATTGTAAAAC+AGG | - | chr8_1:84757290-84757309 | Msa1221210:intron | 15.0% |
| !!! | TTTTAATGTATTGTAAAACA+GGG | - | chr8_1:84757291-84757310 | Msa1221210:intron | 15.0% |
| !! | ATAAAAGGAATAATATTTGA+TGG | + | chr8_1:84757525-84757544 | None:intergenic | 15.0% |
| !! | CCTATATTATCATATATAAA+AGG | + | chr8_1:84757540-84757559 | None:intergenic | 15.0% |
| !!! | CCTTTTATATATGATAATAT+AGG | - | chr8_1:84757537-84757556 | Msa1221210:intron | 15.0% |
| !! | AACTTCATAAAAATTAAAAC+TGG | - | chr8_1:84757608-84757627 | Msa1221210:intron | 15.0% |
| !!! | TTTTTAACCAAAAAAAGTAA+AGG | - | chr8_1:84758855-84758874 | Msa1221210:intron | 15.0% |
| !!! | TTTTAACCAAAAAAAGTAAA+GGG | - | chr8_1:84758856-84758875 | Msa1221210:intron | 15.0% |
| !! | TTTAAATAAAAGTGAAAACA+GGG | + | chr8_1:84758936-84758955 | None:intergenic | 15.0% |
| !!! | AAAGATTTTTATACAGAAAA+TGG | - | chr8_1:84758953-84758972 | Msa1221210:intron | 15.0% |
| !! | ATTCTAGACAAATATTTAAA+AGG | - | chr8_1:84758996-84759015 | Msa1221210:intron | 15.0% |
| !! | TTCTAGACAAATATTTAAAA+GGG | - | chr8_1:84758997-84759016 | Msa1221210:intron | 15.0% |
| !!! | ATTACATTAATAATGGTTTT+AGG | - | chr8_1:84759023-84759042 | Msa1221210:CDS | 15.0% |
| !! | AGATTTAAATAAGGAAAAAT+AGG | + | chr8_1:84759079-84759098 | None:intergenic | 15.0% |
| !! | AGATTCAATAATATTATTCT+GGG | + | chr8_1:84759105-84759124 | None:intergenic | 15.0% |
| !! | TAGATTCAATAATATTATTC+TGG | + | chr8_1:84759106-84759125 | None:intergenic | 15.0% |
| !!! | CTTTTATTCGATTATTATTT+TGG | - | chr8_1:84759402-84759421 | Msa1221210:intron | 15.0% |
| !!! | GACTTTTTATTATAATCAAA+CGG | + | chr8_1:84759516-84759535 | None:intergenic | 15.0% |
| !! | TTCTTAAACAAATAAATCAA+CGG | - | chr8_1:84759586-84759605 | Msa1221210:intron | 15.0% |
| !! | ATTCATAATATAGGAATGTT+TGG | - | chr8_1:84755742-84755761 | Msa1221210:three_prime_UTR | 20.0% |
| !!! | CATATTTTTATTCAAACCTT+AGG | - | chr8_1:84755888-84755907 | Msa1221210:three_prime_UTR | 20.0% |
| !! | ATATTCATCTTTGAATTTGT+TGG | - | chr8_1:84757180-84757199 | Msa1221210:intron | 20.0% |
| !!! | GGAAAATTGAATTTGAAATA+AGG | + | chr8_1:84757358-84757377 | None:intergenic | 20.0% |
| !!! | AATTCAATTTTCCATTTTAC+AGG | - | chr8_1:84757365-84757384 | Msa1221210:intron | 20.0% |
| !!! | ATTCAATTTTCCATTTTACA+GGG | - | chr8_1:84757366-84757385 | Msa1221210:intron | 20.0% |
| !! | TTTACTAAGTTATTAACTAC+TGG | + | chr8_1:84757664-84757683 | None:intergenic | 20.0% |
| !! | ACATCATTATAATTACAAGA+TGG | + | chr8_1:84757721-84757740 | None:intergenic | 20.0% |
| !! | GAGATAGATAATTAAATGTA+AGG | + | chr8_1:84757967-84757986 | None:intergenic | 20.0% |
| !!! | TTGTTATTTGCATATTATGT+TGG | - | chr8_1:84758109-84758128 | Msa1221210:intron | 20.0% |
| !! | GGTAAAAAATTGTCAAATAT+AGG | + | chr8_1:84758351-84758370 | None:intergenic | 20.0% |
| !!! | TTTGGTTTAAGAAATATAAC+GGG | + | chr8_1:84758770-84758789 | None:intergenic | 20.0% |
| !!! | CTTTGGTTTAAGAAATATAA+CGG | + | chr8_1:84758771-84758790 | None:intergenic | 20.0% |
| !!! | CAGTATCATAATTTGTTATT+TGG | - | chr8_1:84758829-84758848 | Msa1221210:intron | 20.0% |
| !! | CTTTAAATAAAAGTGAAAAC+AGG | + | chr8_1:84758937-84758956 | None:intergenic | 20.0% |
| !! | AGGGTAAATTACATTAATAA+TGG | - | chr8_1:84759016-84759035 | Msa1221210:CDS | 20.0% |
| !! | AATAAGGAAAAATAGGTAAT+TGG | + | chr8_1:84759072-84759091 | None:intergenic | 20.0% |
| !!! | ACTTGTACAAACAAATTTTT+TGG | + | chr8_1:84759744-84759763 | None:intergenic | 20.0% |
| !!! | TTTTACAGAAAATAATGCAA+CGG | - | chr8_1:84759804-84759823 | Msa1221210:intron | 20.0% |
| !! | AAGGAAAAGTAAAGAATATA+CGG | + | chr8_1:84759869-84759888 | None:intergenic | 20.0% |
| !! | AAAGTAAGACACTAAAAAAA+AGG | + | chr8_1:84759888-84759907 | None:intergenic | 20.0% |
| !! | AACAATGTAAAATGATAGAA+TGG | + | chr8_1:84760373-84760392 | None:intergenic | 20.0% |
| !!! | TTATGTAAGTTTTCAAAACT+GGG | + | chr8_1:84760500-84760519 | None:intergenic | 20.0% |
| !!! | ATTATGTAAGTTTTCAAAAC+TGG | + | chr8_1:84760501-84760520 | None:intergenic | 20.0% |
| !!! | ATTTAGGTGTTTTTATACTA+AGG | - | chr8_1:84760754-84760773 | Msa1221210:intron | 20.0% |
| ! | ATAAAAGAAAAAAGAAAGCG+TGG | + | chr8_1:84755665-84755684 | None:intergenic | 25.0% |
| ! | TATTCAAACCTTAGGTTTAA+AGG | - | chr8_1:84755896-84755915 | Msa1221210:three_prime_UTR | 25.0% |
| ! | GATTAAAAAGGTTTCTCTAA+AGG | + | chr8_1:84756317-84756336 | None:intergenic | 25.0% |
| !!! | GTACTAAGTTGTTAGTTTTA+TGG | - | chr8_1:84756435-84756454 | Msa1221210:CDS | 25.0% |
| !! | ATTGATAATCGTTGAAAAGT+GGG | + | chr8_1:84756551-84756570 | None:intergenic | 25.0% |
| !! | TATTGATAATCGTTGAAAAG+TGG | + | chr8_1:84756552-84756571 | None:intergenic | 25.0% |
| ! | AAGAGAGAAAAATAGACAAA+TGG | + | chr8_1:84756735-84756754 | None:intergenic | 25.0% |
| ! | TTAAATGTGTCAATCAATGA+TGG | + | chr8_1:84756824-84756843 | None:intergenic | 25.0% |
| !!! | AATCACTGTTTCTTCTATTT+TGG | - | chr8_1:84756948-84756967 | Msa1221210:intron | 25.0% |
| !!! | ATCACTGTTTCTTCTATTTT+GGG | - | chr8_1:84756949-84756968 | Msa1221210:intron | 25.0% |
| ! | AAAATCAACTTTATCAAGGA+AGG | + | chr8_1:84757140-84757159 | None:intergenic | 25.0% |
| ! | TTATCGTTTATGTATTCTCA+TGG | - | chr8_1:84757207-84757226 | Msa1221210:intron | 25.0% |
| ! | TATCGTTTATGTATTCTCAT+GGG | - | chr8_1:84757208-84757227 | Msa1221210:intron | 25.0% |
| ! | GTTTCTTAAGACTGAATTTA+TGG | - | chr8_1:84757899-84757918 | Msa1221210:CDS | 25.0% |
| ! | CATTTAATTATCTATCTCTG+TGG | - | chr8_1:84757969-84757988 | Msa1221210:CDS | 25.0% |
| !! | CTTTATCATCATTGATAGTA+TGG | + | chr8_1:84758029-84758048 | None:intergenic | 25.0% |
| ! | TAAGCTCTTTAGTCAATAAA+AGG | - | chr8_1:84758058-84758077 | Msa1221210:intron | 25.0% |
| ! | AAGCTCTTTAGTCAATAAAA+GGG | - | chr8_1:84758059-84758078 | Msa1221210:intron | 25.0% |
| !! | ACAATTTTCAGCATAACTTA+AGG | + | chr8_1:84758093-84758112 | None:intergenic | 25.0% |
| ! | TTACAGTTATTAATGATTGC+TGG | + | chr8_1:84758259-84758278 | None:intergenic | 25.0% |
| ! | CTCAAGTAAAATCATTTCAT+CGG | + | chr8_1:84758284-84758303 | None:intergenic | 25.0% |
| ! | TCATTCTCAAAATATAATGC+CGG | - | chr8_1:84758646-84758665 | Msa1221210:CDS | 25.0% |
| ! | ATGAATTATGATACTTAACC+AGG | + | chr8_1:84758737-84758756 | None:intergenic | 25.0% |
| !! | TTAAATTTTCTACGAACCTT+GGG | - | chr8_1:84759368-84759387 | Msa1221210:intron | 25.0% |
| ! | AAAAGAATTGAAATATCCCA+AGG | + | chr8_1:84759387-84759406 | None:intergenic | 25.0% |
| ! | ATCTAAGTCCGATTAAAAAA+GGG | - | chr8_1:84759464-84759483 | Msa1221210:intron | 25.0% |
| ! | AACTATCTCCATATATCAAA+GGG | + | chr8_1:84759669-84759688 | None:intergenic | 25.0% |
| ! | AAACTATCTCCATATATCAA+AGG | + | chr8_1:84759670-84759689 | None:intergenic | 25.0% |
| ! | TATGACTCCAAAAAAATCAT+TGG | - | chr8_1:84760260-84760279 | Msa1221210:intron | 25.0% |
| !!! | ACAAATTATACTGATTCCTT+TGG | + | chr8_1:84760446-84760465 | None:intergenic | 25.0% |
| !! | ATTTGTGAAATCTTCTAAAG+CGG | - | chr8_1:84760460-84760479 | Msa1221210:intron | 25.0% |
| ! | ATAGAATGATAAACCACAAT+TGG | + | chr8_1:84760678-84760697 | None:intergenic | 25.0% |
| ! | CAGTTGAATGATTACAATTT+AGG | - | chr8_1:84760738-84760757 | Msa1221210:intron | 25.0% |
| !! | TATGTATTATCTTTTTGACG+TGG | - | chr8_1:84760848-84760867 | Msa1221210:intron | 25.0% |
| TTTCTGATACAATAGCAAAG+TGG | + | chr8_1:84755592-84755611 | None:intergenic | 30.0% | |
| TACATCGCGATTCATAATAT+AGG | - | chr8_1:84755733-84755752 | Msa1221210:three_prime_UTR | 30.0% | |
| !! | GGTTTAGTTCTCATTCATTA+TGG | - | chr8_1:84755805-84755824 | Msa1221210:three_prime_UTR | 30.0% |
| TTCTCATTCATTATGGCTAA+CGG | - | chr8_1:84755812-84755831 | Msa1221210:three_prime_UTR | 30.0% | |
| TATCCTAATGTAACTAACGA+GGG | + | chr8_1:84756024-84756043 | None:intergenic | 30.0% | |
| ATATCCTAATGTAACTAACG+AGG | + | chr8_1:84756025-84756044 | None:intergenic | 30.0% | |
| TCGTTAGTTACATTAGGATA+TGG | - | chr8_1:84756024-84756043 | Msa1221210:three_prime_UTR | 30.0% | |
| GTGACTGCTAATGATTAAAA+AGG | + | chr8_1:84756329-84756348 | None:intergenic | 30.0% | |
| !! | TGGTTAAACATCTAGAGTTT+TGG | - | chr8_1:84756352-84756371 | Msa1221210:CDS | 30.0% |
| !! | GGTTAAACATCTAGAGTTTT+GGG | - | chr8_1:84756353-84756372 | Msa1221210:CDS | 30.0% |
| AATTATAGTCCTTGTACAAG+AGG | + | chr8_1:84756473-84756492 | None:intergenic | 30.0% | |
| ! | TTGATAATCGTTGAAAAGTG+GGG | + | chr8_1:84756550-84756569 | None:intergenic | 30.0% |
| TATGGCATATTCAAGCAAAA+AGG | + | chr8_1:84756609-84756628 | None:intergenic | 30.0% | |
| CACATTAGTGCAATATTTGA+CGG | + | chr8_1:84757095-84757114 | None:intergenic | 30.0% | |
| !! | TTCATCTTTGAATTTGTTGG+TGG | - | chr8_1:84757183-84757202 | Msa1221210:intron | 30.0% |
| ATCGTTTATGTATTCTCATG+GGG | - | chr8_1:84757209-84757228 | Msa1221210:intron | 30.0% | |
| !!! | AAGAGGGATCAATTTTTTGT+CGG | - | chr8_1:84757408-84757427 | Msa1221210:intron | 30.0% |
| TATTAAGAGAAGTAGCACTA+CGG | + | chr8_1:84757568-84757587 | None:intergenic | 30.0% | |
| ! | AAAACTGGTTCAGTTATGTA+TGG | - | chr8_1:84757623-84757642 | Msa1221210:intron | 30.0% |
| TTTATGTGATTTACTTCCTC+AGG | - | chr8_1:84757740-84757759 | Msa1221210:intron | 30.0% | |
| !!! | CAACGCTACTTTTTTACTAT+GGG | + | chr8_1:84757802-84757821 | None:intergenic | 30.0% |
| !!! | TCAACGCTACTTTTTTACTA+TGG | + | chr8_1:84757803-84757822 | None:intergenic | 30.0% |
| ! | GATAGTATGGATTAAATTCC+AGG | + | chr8_1:84758016-84758035 | None:intergenic | 30.0% |
| ! | ATATGAATTTTGTGTGTGTG+TGG | - | chr8_1:84758197-84758216 | Msa1221210:intron | 30.0% |
| ! | TATGAATTTTGTGTGTGTGT+GGG | - | chr8_1:84758198-84758217 | Msa1221210:intron | 30.0% |
| CATATGCACTGTATTTACTT+TGG | - | chr8_1:84758440-84758459 | Msa1221210:intron | 30.0% | |
| TGGAAGCAAAGATATATCTA+TGG | - | chr8_1:84758591-84758610 | Msa1221210:intron | 30.0% | |
| GGAAGCAAAGATATATCTAT+GGG | - | chr8_1:84758592-84758611 | Msa1221210:intron | 30.0% | |
| !! | ATATTTTGAGAATGAAGCAG+AGG | + | chr8_1:84758641-84758660 | None:intergenic | 30.0% |
| CATTCTCAAAATATAATGCC+GGG | - | chr8_1:84758647-84758666 | Msa1221210:CDS | 30.0% | |
| ! | AGAGAAATCTGGTTTATTGA+AGG | + | chr8_1:84758677-84758696 | None:intergenic | 30.0% |
| ! | TGTTGTTAGTACTATTTTCC+TGG | - | chr8_1:84758716-84758735 | Msa1221210:CDS | 30.0% |
| GTTTATTGAAGGCAATGATA+TGG | + | chr8_1:84758797-84758816 | None:intergenic | 30.0% | |
| ATACCATGTTTCTTAAACCA+AGG | + | chr8_1:84758885-84758904 | None:intergenic | 30.0% | |
| TTGGTTTAAGAAACATGGTA+TGG | - | chr8_1:84758884-84758903 | Msa1221210:intron | 30.0% | |
| TGGTTTCACTAATCATTATG+TGG | - | chr8_1:84758904-84758923 | Msa1221210:intron | 30.0% | |
| GGTTTCACTAATCATTATGT+GGG | - | chr8_1:84758905-84758924 | Msa1221210:intron | 30.0% | |
| TCTGGGCAAAGATTTAAATA+AGG | + | chr8_1:84759088-84759107 | None:intergenic | 30.0% | |
| TGTTCACTACTATCAACAAT+TGG | + | chr8_1:84759136-84759155 | None:intergenic | 30.0% | |
| TAACAGTGTAGAGAATTGTA+TGG | - | chr8_1:84759339-84759358 | Msa1221210:intron | 30.0% | |
| ! | GTTAAATTTTCTACGAACCT+TGG | - | chr8_1:84759367-84759386 | Msa1221210:intron | 30.0% |
| !!! | TCGATTATTATTTTGGAGAG+AGG | - | chr8_1:84759409-84759428 | Msa1221210:intron | 30.0% |
| CATCTAAGTCCGATTAAAAA+AGG | - | chr8_1:84759463-84759482 | Msa1221210:intron | 30.0% | |
| !!! | TTGGTGAACCCTTTTTTAAT+CGG | + | chr8_1:84759475-84759494 | None:intergenic | 30.0% |
| GTTATCAATGAGGGAAATAT+TGG | + | chr8_1:84759494-84759513 | None:intergenic | 30.0% | |
| AATCAAACGGTTATCAATGA+GGG | + | chr8_1:84759503-84759522 | None:intergenic | 30.0% | |
| TAATCAAACGGTTATCAATG+AGG | + | chr8_1:84759504-84759523 | None:intergenic | 30.0% | |
| TAAATCAACGGTTAGTGAAA+AGG | - | chr8_1:84759598-84759617 | Msa1221210:intron | 30.0% | |
| ACTATCTCCATATATCAAAG+GGG | + | chr8_1:84759668-84759687 | None:intergenic | 30.0% | |
| ! | GTGAAAGTTGTCTTTTCTTT+CGG | - | chr8_1:84759920-84759939 | Msa1221210:intron | 30.0% |
| GCAAATGTGTTTACTTACTT+TGG | - | chr8_1:84759958-84759977 | Msa1221210:intron | 30.0% | |
| ATGTGTTTACTTACTTTGGT+AGG | - | chr8_1:84759962-84759981 | Msa1221210:intron | 30.0% | |
| TGTGTTTACTTACTTTGGTA+GGG | - | chr8_1:84759963-84759982 | Msa1221210:CDS | 30.0% | |
| ! | TTTTGGATCTATTAACTGTG+AGG | + | chr8_1:84760144-84760163 | None:intergenic | 30.0% |
| !!! | GATTTTTTTGGAGTCATACT+CGG | + | chr8_1:84760258-84760277 | None:intergenic | 30.0% |
| !!! | AGGTGAACCAATGATTTTTT+TGG | + | chr8_1:84760270-84760289 | None:intergenic | 30.0% |
| GTCGTTGAATAAGATTTGAT+AGG | + | chr8_1:84760338-84760357 | None:intergenic | 30.0% | |
| GTTTACCTTATGATATGAGA+GGG | + | chr8_1:84760424-84760443 | None:intergenic | 30.0% | |
| CATATCATAAGGTAAACCAA+AGG | - | chr8_1:84760427-84760446 | Msa1221210:intron | 30.0% | |
| !!! | GTTTTTTTCCTAGTGATTCA+TGG | - | chr8_1:84760588-84760607 | Msa1221210:intron | 30.0% |
| AGTATGAATAAGAGTAGATG+AGG | - | chr8_1:84760781-84760800 | Msa1221210:intron | 30.0% | |
| ! | TTTTTGACGTGGTTACATAT+TGG | - | chr8_1:84760859-84760878 | Msa1221210:five_prime_UTR | 30.0% |
| !!! | CATTTTTTTATGGAGCTGCT+GGG | + | chr8_1:84755559-84755578 | None:intergenic | 35.0% |
| !!! | CCAGCTACTGCATTTTTTTA+TGG | + | chr8_1:84755569-84755588 | None:intergenic | 35.0% |
| CCATAAAAAAATGCAGTAGC+TGG | - | chr8_1:84755566-84755585 | Msa1221210:three_prime_UTR | 35.0% | |
| ! | AAGAAAAAAGAAAGCGTGGA+CGG | + | chr8_1:84755661-84755680 | None:intergenic | 35.0% |
| ! | CACAGTCAGTTGTCAATTTT+CGG | + | chr8_1:84755770-84755789 | None:intergenic | 35.0% |
| ! | CTTTTGCCAATCTCAGAAAA+CGG | + | chr8_1:84755845-84755864 | None:intergenic | 35.0% |
| !! | AAAAGAGCAAGAGGTATTAC+AGG | - | chr8_1:84755860-84755879 | Msa1221210:three_prime_UTR | 35.0% |
| GAATCAGTCCTTTAAACCTA+AGG | + | chr8_1:84755907-84755926 | None:intergenic | 35.0% | |
| TTCTATAACACGAGATAAGC+TGG | + | chr8_1:84755929-84755948 | None:intergenic | 35.0% | |
| AACTAACGAGGGATCTATTT+AGG | + | chr8_1:84756013-84756032 | None:intergenic | 35.0% | |
| AGTGTTGTCAAATATCAGCA+TGG | - | chr8_1:84756049-84756068 | Msa1221210:three_prime_UTR | 35.0% | |
| TGTGATGTATACTTGAGTGA+GGG | + | chr8_1:84756147-84756166 | None:intergenic | 35.0% | |
| ATGTGATGTATACTTGAGTG+AGG | + | chr8_1:84756148-84756167 | None:intergenic | 35.0% | |
| GAGAAATTCTGCAATGTTGT+AGG | + | chr8_1:84756228-84756247 | None:intergenic | 35.0% | |
| CTGAGAGAATGAGTATGAAA+AGG | - | chr8_1:84756285-84756304 | Msa1221210:CDS | 35.0% | |
| AACTCTAGATGTTTAACCAC+AGG | + | chr8_1:84756351-84756370 | None:intergenic | 35.0% | |
| TACAATTCCATATGGTAGGA+GGG | + | chr8_1:84757072-84757091 | None:intergenic | 35.0% | |
| TTTGACGGTACAATTCCATA+TGG | + | chr8_1:84757080-84757099 | None:intergenic | 35.0% | |
| CGTCAAATATTGCACTAATG+TGG | - | chr8_1:84757093-84757112 | Msa1221210:intron | 35.0% | |
| TTTATGTATTCTCATGGGGA+TGG | - | chr8_1:84757213-84757232 | Msa1221210:intron | 35.0% | |
| TTATGTATTCTCATGGGGAT+GGG | - | chr8_1:84757214-84757233 | Msa1221210:intron | 35.0% | |
| AGGATGCATATTTGTGCAAT+GGG | - | chr8_1:84757245-84757264 | Msa1221210:intron | 35.0% | |
| TTAAACACGCTTTACAAGAG+TGG | - | chr8_1:84757435-84757454 | Msa1221210:intron | 35.0% | |
| ATTAAGAGAAGTAGCACTAC+GGG | + | chr8_1:84757567-84757586 | None:intergenic | 35.0% | |
| !! | CAACATTATGGGTTTTGGTA+GGG | + | chr8_1:84758372-84758391 | None:intergenic | 35.0% |
| ! | TGCAAAGGATCCTTTTCATA+TGG | - | chr8_1:84758408-84758427 | Msa1221210:intron | 35.0% |
| GTCTTGCTAACCATATGAAA+AGG | + | chr8_1:84758421-84758440 | None:intergenic | 35.0% | |
| CTGTGGAATATTATGTCAGT+TGG | - | chr8_1:84758483-84758502 | Msa1221210:intron | 35.0% | |
| !! | GCAGCTATTGATTCAAGTAT+TGG | - | chr8_1:84758529-84758548 | Msa1221210:intron | 35.0% |
| ! | ATAAGTGTTGCAGAGAAATC+TGG | + | chr8_1:84758688-84758707 | None:intergenic | 35.0% |
| AGGCAATGATATGGTTTCTT+TGG | + | chr8_1:84758788-84758807 | None:intergenic | 35.0% | |
| GCCTTCAATAAACCATATCA+CGG | - | chr8_1:84758804-84758823 | Msa1221210:intron | 35.0% | |
| ACCGTGATATGGTTTATTGA+AGG | + | chr8_1:84758808-84758827 | None:intergenic | 35.0% | |
| TATGATACTGAACCGTGATA+TGG | + | chr8_1:84758819-84758838 | None:intergenic | 35.0% | |
| !!! | AGGAAGCCCTTTACTTTTTT+TGG | + | chr8_1:84758865-84758884 | None:intergenic | 35.0% |
| AAAAAAGTAAAGGGCTTCCT+TGG | - | chr8_1:84758865-84758884 | Msa1221210:intron | 35.0% | |
| CTTCCTTGGTTTAAGAAACA+TGG | - | chr8_1:84758879-84758898 | Msa1221210:intron | 35.0% | |
| !! | CTGGACTTAAGGGTATTAAT+AGG | - | chr8_1:84759210-84759229 | Msa1221210:intron | 35.0% |
| AAGCCAGAAGATATATGTGT+GGG | + | chr8_1:84759294-84759313 | None:intergenic | 35.0% | |
| AAAGCCAGAAGATATATGTG+TGG | + | chr8_1:84759295-84759314 | None:intergenic | 35.0% | |
| AAGGCATATTGCGTTGAAAA+TGG | + | chr8_1:84759637-84759656 | None:intergenic | 35.0% | |
| TACAGAAAATAATGCAACGG+AGG | - | chr8_1:84759807-84759826 | Msa1221210:intron | 35.0% | |
| TCCATGTGCGTATATATTGA+TGG | - | chr8_1:84759842-84759861 | Msa1221210:intron | 35.0% | |
| TCCATCAATATATACGCACA+TGG | + | chr8_1:84759846-84759865 | None:intergenic | 35.0% | |
| ! | TCTTTTCTTTCGGAAGTTGT+AGG | - | chr8_1:84759930-84759949 | Msa1221210:intron | 35.0% |
| TTTGGTAGGGTAACAAAACA+TGG | - | chr8_1:84759976-84759995 | Msa1221210:CDS | 35.0% | |
| GGCATCTTACATTCATTATG+TGG | - | chr8_1:84760040-84760059 | Msa1221210:intron | 35.0% | |
| TCTGAGAACAGATTTACCTT+TGG | - | chr8_1:84760116-84760135 | Msa1221210:intron | 35.0% | |
| CTGAGAACAGATTTACCTTT+GGG | - | chr8_1:84760117-84760136 | Msa1221210:intron | 35.0% | |
| ! | CGAGTCTTCAAAACTGTTTT+TGG | + | chr8_1:84760161-84760180 | None:intergenic | 35.0% |
| GATAGGGTTATGAGTGAATT+TGG | + | chr8_1:84760233-84760252 | None:intergenic | 35.0% | |
| TTGATAGGCAAACCAGTTTA+AGG | + | chr8_1:84760323-84760342 | None:intergenic | 35.0% | |
| TTAAGCCCTCTCATATCATA+AGG | - | chr8_1:84760416-84760435 | Msa1221210:intron | 35.0% | |
| GGTTTACCTTATGATATGAG+AGG | + | chr8_1:84760425-84760444 | None:intergenic | 35.0% | |
| TTGTACTGCCATTCTATATC+TGG | - | chr8_1:84760546-84760565 | Msa1221210:intron | 35.0% | |
| AACTCATGCCAGATATAGAA+TGG | + | chr8_1:84760557-84760576 | None:intergenic | 35.0% | |
| TCTATATCTGGCATGAGTTA+TGG | - | chr8_1:84760558-84760577 | Msa1221210:intron | 35.0% | |
| CTATATCTGGCATGAGTTAT+GGG | - | chr8_1:84760559-84760578 | Msa1221210:intron | 35.0% | |
| CTTCTCATATGAACCAATTG+TGG | - | chr8_1:84760662-84760681 | Msa1221210:exon | 35.0% | |
| !! | TTCTGTAGATGAAGTGTTGA+AGG | + | chr8_1:84760702-84760721 | None:intergenic | 35.0% |
| !!! | GCATTTTTTTATGGAGCTGC+TGG | + | chr8_1:84755560-84755579 | None:intergenic | 40.0% |
| CGAAAATTGACAACTGACTG+TGG | - | chr8_1:84755768-84755787 | Msa1221210:three_prime_UTR | 40.0% | |
| !! | ACTGTGGTTTTGCATTTGCA+GGG | - | chr8_1:84755784-84755803 | Msa1221210:three_prime_UTR | 40.0% |
| GGATCTATTTAGGCTCTGTT+TGG | + | chr8_1:84756003-84756022 | None:intergenic | 40.0% | |
| GATCCCTCGTTAGTTACATT+AGG | - | chr8_1:84756018-84756037 | Msa1221210:three_prime_UTR | 40.0% | |
| GTGATGTATACTTGAGTGAG+GGG | + | chr8_1:84756146-84756165 | None:intergenic | 40.0% | |
| TCACTGATGTATTAATCGCC+AGG | - | chr8_1:84756259-84756278 | Msa1221210:CDS | 40.0% | |
| CACTGATGTATTAATCGCCA+GGG | - | chr8_1:84756260-84756279 | Msa1221210:CDS | 40.0% | |
| TAATCATTAGCAGTCACCTG+TGG | - | chr8_1:84756332-84756351 | Msa1221210:CDS | 40.0% | |
| !!! | ACATCTAGAGTTTTGGGTGT+CGG | - | chr8_1:84756359-84756378 | Msa1221210:CDS | 40.0% |
| ATTACCAATCCAGTGGAACT+TGG | + | chr8_1:84756522-84756541 | None:intergenic | 40.0% | |
| GGTAAGAATTACCAATCCAG+TGG | + | chr8_1:84756529-84756548 | None:intergenic | 40.0% | |
| TATATGTGCGACTGTGTGAT+TGG | + | chr8_1:84756635-84756654 | None:intergenic | 40.0% | |
| ACAATTCCATATGGTAGGAG+GGG | + | chr8_1:84757071-84757090 | None:intergenic | 40.0% | |
| GTACAATTCCATATGGTAGG+AGG | + | chr8_1:84757073-84757092 | None:intergenic | 40.0% | |
| ACGGTACAATTCCATATGGT+AGG | + | chr8_1:84757076-84757095 | None:intergenic | 40.0% | |
| TTGCACTAATGTGGAGAGAA+CGG | - | chr8_1:84757102-84757121 | Msa1221210:intron | 40.0% | |
| GAGGATGCATATTTGTGCAA+TGG | - | chr8_1:84757244-84757263 | Msa1221210:intron | 40.0% | |
| TGTGCAATGGGAAACTTGTA+TGG | - | chr8_1:84757257-84757276 | Msa1221210:intron | 40.0% | |
| !!! | GTCACTTTTGTAGATACCTG+AGG | + | chr8_1:84757759-84757778 | None:intergenic | 40.0% |
| AATATACCCGATCACAAGTC+AGG | - | chr8_1:84757828-84757847 | Msa1221210:CDS | 40.0% | |
| TGCAGTGTTTGTATTTGCTC+TGG | - | chr8_1:84757923-84757942 | Msa1221210:CDS | 40.0% | |
| !! | CCAACATTATGGGTTTTGGT+AGG | + | chr8_1:84758373-84758392 | None:intergenic | 40.0% |
| CCTACCAAAACCCATAATGT+TGG | - | chr8_1:84758370-84758389 | Msa1221210:intron | 40.0% | |
| ! | CTCACCAACATTATGGGTTT+TGG | + | chr8_1:84758377-84758396 | None:intergenic | 40.0% |
| CAAAACCCATAATGTTGGTG+AGG | - | chr8_1:84758375-84758394 | Msa1221210:intron | 40.0% | |
| CTGAACCTCACCAACATTAT+GGG | + | chr8_1:84758383-84758402 | None:intergenic | 40.0% | |
| CTTGAATCAATAGCTGCATG+AGG | + | chr8_1:84758526-84758545 | None:intergenic | 40.0% | |
| !! | ATATCTATGGGTGCTGAAGT+TGG | - | chr8_1:84758604-84758623 | Msa1221210:intron | 40.0% |
| TGGTTTATTGAAGGCAATCC+CGG | + | chr8_1:84758668-84758687 | None:intergenic | 40.0% | |
| AGACCCACACATATATCTTC+TGG | - | chr8_1:84759288-84759307 | Msa1221210:intron | 40.0% | |
| TTACGACTGATGAAGAGATG+TGG | + | chr8_1:84759703-84759722 | None:intergenic | 40.0% | |
| ATAATGCAACGGAGGTTTAG+AGG | - | chr8_1:84759815-84759834 | Msa1221210:intron | 40.0% | |
| TAATGCAACGGAGGTTTAGA+GGG | - | chr8_1:84759816-84759835 | Msa1221210:intron | 40.0% | |
| ATGGACTCACTGTTTATGCA+GGG | - | chr8_1:84759995-84760014 | Msa1221210:CDS | 40.0% | |
| TGTTTATGCAGGGCTGATAA+AGG | - | chr8_1:84760005-84760024 | Msa1221210:CDS | 40.0% | |
| TGATAAAGGACAGTCTCTGA+AGG | - | chr8_1:84760019-84760038 | Msa1221210:intron | 40.0% | |
| CAGCAACTGTTAATCCATCT+GGG | + | chr8_1:84760070-84760089 | None:intergenic | 40.0% | |
| GGTAAATCTGTTCTCAGAAG+AGG | + | chr8_1:84760114-84760133 | None:intergenic | 40.0% | |
| TATTAACTGTGAGGTCCCAA+AGG | + | chr8_1:84760135-84760154 | None:intergenic | 40.0% | |
| ! | ATTGGTTCACCTGCCAAATT+TGG | - | chr8_1:84760278-84760297 | Msa1221210:intron | 40.0% |
| !! | AAATCTTCTAAAGCGGCACA+GGG | - | chr8_1:84760467-84760486 | Msa1221210:intron | 40.0% |
| TTTCCTAGTGATTCATGGTC+AGG | - | chr8_1:84760593-84760612 | Msa1221210:intron | 40.0% | |
| ATTCATGGTCAGGTGAATAG+TGG | - | chr8_1:84760603-84760622 | Msa1221210:intron | 40.0% | |
| AATAAGAGTAGATGAGGTGC+TGG | - | chr8_1:84760787-84760806 | Msa1221210:intron | 40.0% | |
| CAAGAAACATGCTTGTAGTC+TGG | + | chr8_1:84760923-84760942 | None:intergenic | 40.0% | |
| CAGACTACAAGCATGTTTCT+TGG | - | chr8_1:84760921-84760940 | Msa1221210:five_prime_UTR | 40.0% | |
| TGTATCAGAAACGAGTAGCC+AGG | - | chr8_1:84755601-84755620 | Msa1221210:three_prime_UTR | 45.0% | |
| ACGGAGTTTCTCACTGTTTG+CGG | + | chr8_1:84755642-84755661 | None:intergenic | 45.0% | |
| !! | GACTGTGGTTTTGCATTTGC+AGG | - | chr8_1:84755783-84755802 | Msa1221210:three_prime_UTR | 45.0% |
| GAGATTGGCAAAAGAGCAAG+AGG | - | chr8_1:84755851-84755870 | Msa1221210:three_prime_UTR | 45.0% | |
| GAATCGACAGGCTAAACTTG+TGG | + | chr8_1:84756500-84756519 | None:intergenic | 45.0% | |
| GATTCCAAGTTCCACTGGAT+TGG | - | chr8_1:84756515-84756534 | Msa1221210:intron | 45.0% | |
| CGACTGTGTGATTGGAACTA+TGG | + | chr8_1:84756627-84756646 | None:intergenic | 45.0% | |
| CAATTCCATATGGTAGGAGG+GGG | + | chr8_1:84757070-84757089 | None:intergenic | 45.0% | |
| TCTTTAACCCTGTGGCTGTA+AGG | + | chr8_1:84757392-84757411 | None:intergenic | 45.0% | |
| TTACAGCCACAGGGTTAAAG+AGG | - | chr8_1:84757391-84757410 | Msa1221210:intron | 45.0% | |
| TACAGCCACAGGGTTAAAGA+GGG | - | chr8_1:84757392-84757411 | Msa1221210:intron | 45.0% | |
| TTGATCCCTCTTTAACCCTG+TGG | + | chr8_1:84757400-84757419 | None:intergenic | 45.0% | |
| ! | ACCTTTCCTGACTTGTGATC+GGG | + | chr8_1:84757837-84757856 | None:intergenic | 45.0% |
| ! | CACCTTTCCTGACTTGTGAT+CGG | + | chr8_1:84757838-84757857 | None:intergenic | 45.0% |
| ! | TTTTGTGTGTGTGTGGGATG+TGG | - | chr8_1:84758204-84758223 | Msa1221210:intron | 45.0% |
| ! | TGGTAGACGGATTCTCTTTG+TGG | - | chr8_1:84758224-84758243 | Msa1221210:intron | 45.0% |
| TGAAACTGCCATTCCAGTCA+TGG | - | chr8_1:84758315-84758334 | Msa1221210:intron | 45.0% | |
| GCTGAACCTCACCAACATTA+TGG | + | chr8_1:84758384-84758403 | None:intergenic | 45.0% | |
| TGAGGTTCAGCTTCATGCAA+AGG | - | chr8_1:84758393-84758412 | Msa1221210:intron | 45.0% | |
| AGCAGAAAGCTCCAATTGAG+GGG | + | chr8_1:84758566-84758585 | None:intergenic | 45.0% | |
| CAGCAGAAAGCTCCAATTGA+GGG | + | chr8_1:84758567-84758586 | None:intergenic | 45.0% | |
| TTGGAGCTTTCTGCTGCAAT+TGG | - | chr8_1:84758571-84758590 | Msa1221210:intron | 45.0% | |
| CTGAACTAATTGCATCGCAC+TGG | - | chr8_1:84759191-84759210 | Msa1221210:intron | 45.0% | |
| ATTGCATCGCACTGGACTTA+AGG | - | chr8_1:84759199-84759218 | Msa1221210:intron | 45.0% | |
| TTGCATCGCACTGGACTTAA+GGG | - | chr8_1:84759200-84759219 | Msa1221210:intron | 45.0% | |
| ACACGATGAACACCTCTGAA+TGG | - | chr8_1:84759437-84759456 | Msa1221210:intron | 45.0% | |
| ACTTAGATGCTGCCATTCAG+AGG | + | chr8_1:84759452-84759471 | None:intergenic | 45.0% | |
| TATCAAAGGGGTCTGGTCTA+AGG | + | chr8_1:84759656-84759675 | None:intergenic | 45.0% | |
| GACCAGACCCCTTTGATATA+TGG | - | chr8_1:84759658-84759677 | Msa1221210:intron | 45.0% | |
| CTCCATATATCAAAGGGGTC+TGG | + | chr8_1:84759663-84759682 | None:intergenic | 45.0% | |
| CATGGACTCACTGTTTATGC+AGG | - | chr8_1:84759994-84760013 | Msa1221210:CDS | 45.0% | |
| CAACTGTTAATCCATCTGGG+CGG | + | chr8_1:84760067-84760086 | None:intergenic | 45.0% | |
| GCAGCAACTGTTAATCCATC+TGG | + | chr8_1:84760071-84760090 | None:intergenic | 45.0% | |
| AAGACTCGATTCAGCGATGA+TGG | - | chr8_1:84760173-84760192 | Msa1221210:intron | 45.0% | |
| AGAGAGAGCGAGACCAAATT+TGG | + | chr8_1:84760294-84760313 | None:intergenic | 45.0% | |
| CTCTCTCTCAAGCCTTAAAC+TGG | - | chr8_1:84760308-84760327 | Msa1221210:intron | 45.0% | |
| TACATTGTTGCCATTACCCC+TGG | - | chr8_1:84760384-84760403 | Msa1221210:intron | 45.0% | |
| !! | GAAATCTTCTAAAGCGGCAC+AGG | - | chr8_1:84760466-84760485 | Msa1221210:intron | 45.0% |
| !! | AATCTTCTAAAGCGGCACAG+GGG | - | chr8_1:84760468-84760487 | Msa1221210:intron | 45.0% |
| TCACCTGACCATGAATCACT+AGG | + | chr8_1:84760599-84760618 | None:intergenic | 45.0% | |
| ! | AGGTGAATAGTGGAAGTCTG+AGG | - | chr8_1:84760613-84760632 | Msa1221210:intron | 45.0% |
| ! | GTGCTGGAGATGGATTCATA+TGG | - | chr8_1:84760803-84760822 | Msa1221210:intron | 45.0% |
| ! | CTTGTAGTCTGGAACTGCAA+AGG | + | chr8_1:84760912-84760931 | None:intergenic | 45.0% |
| CAAGCATGTTTCTTGGACAC+CGG | - | chr8_1:84760928-84760947 | Msa1221210:five_prime_UTR | 45.0% | |
| AAGCATGTTTCTTGGACACC+GGG | - | chr8_1:84760929-84760948 | Msa1221210:five_prime_UTR | 45.0% | |
| GAGTTTCTCACTGTTTGCGG+CGG | + | chr8_1:84755639-84755658 | None:intergenic | 50.0% | |
| CCAATCTCAGAAAACGGTGC+TGG | + | chr8_1:84755839-84755858 | None:intergenic | 50.0% | |
| !!! | CCAGCACCGTTTTCTGAGAT+TGG | - | chr8_1:84755836-84755855 | Msa1221210:three_prime_UTR | 50.0% |
| ATCAGCATGGCAGATTGCAG+TGG | - | chr8_1:84756062-84756081 | Msa1221210:three_prime_UTR | 50.0% | |
| TGGCAGATTGCAGTGGTTGA+TGG | - | chr8_1:84756069-84756088 | Msa1221210:three_prime_UTR | 50.0% | |
| TACTCATTCTCTCAGAGCCC+TGG | + | chr8_1:84756280-84756299 | None:intergenic | 50.0% | |
| TCCTTGTACAAGAGGTCTGC+AGG | + | chr8_1:84756465-84756484 | None:intergenic | 50.0% | |
| CAGTGGAACTTGGAATCGAC+AGG | + | chr8_1:84756512-84756531 | None:intergenic | 50.0% | |
| !! | CTGTCGATTCCAAGTTCCAC+TGG | - | chr8_1:84756510-84756529 | Msa1221210:intron | 50.0% |
| GGCTGTAAGGCCCTGTAAAA+TGG | + | chr8_1:84757379-84757398 | None:intergenic | 50.0% | |
| ACCCGATCACAAGTCAGGAA+AGG | - | chr8_1:84757833-84757852 | Msa1221210:CDS | 50.0% | |
| TCATGAATGCACTGCTCTCC+TGG | - | chr8_1:84757995-84758014 | Msa1221210:intron | 50.0% | |
| TGTGTGTGGGATGTGGTAGA+CGG | - | chr8_1:84758211-84758230 | Msa1221210:intron | 50.0% | |
| TCTTACGACGCATCTCACTG+TGG | - | chr8_1:84758466-84758485 | Msa1221210:intron | 50.0% | |
| AAAGCTCCAATTGAGGGGCT+GGG | + | chr8_1:84758561-84758580 | None:intergenic | 50.0% | |
| GCAGCAGAAAGCTCCAATTG+AGG | + | chr8_1:84758568-84758587 | None:intergenic | 50.0% | |
| ! | GGGTCTTCGTTGATGAACTG+TGG | + | chr8_1:84759274-84759293 | None:intergenic | 50.0% |
| GGAGTCATACTCGGCAGATA+GGG | + | chr8_1:84760249-84760268 | None:intergenic | 50.0% | |
| TGGAGTCATACTCGGCAGAT+AGG | + | chr8_1:84760250-84760269 | None:intergenic | 50.0% | |
| AGAGCGAGACCAAATTTGGC+AGG | + | chr8_1:84760290-84760309 | None:intergenic | 50.0% | |
| ATTGTTGCCATTACCCCTGG+TGG | - | chr8_1:84760387-84760406 | Msa1221210:intron | 50.0% | |
| TTGTTGCCATTACCCCTGGT+GGG | - | chr8_1:84760388-84760407 | Msa1221210:intron | 50.0% | |
| AAACATCCCACCAGGGGTAA+TGG | + | chr8_1:84760397-84760416 | None:intergenic | 50.0% | |
| GGCTTAAAACATCCCACCAG+GGG | + | chr8_1:84760403-84760422 | None:intergenic | 50.0% | |
| GGGCTTAAAACATCCCACCA+GGG | + | chr8_1:84760404-84760423 | None:intergenic | 50.0% | |
| AGGGCTTAAAACATCCCACC+AGG | + | chr8_1:84760405-84760424 | None:intergenic | 50.0% | |
| !! | AGTAGATGAGGTGCTGGAGA+TGG | - | chr8_1:84760793-84760812 | Msa1221210:intron | 50.0% |
| GCCTGCAGACCTCTTGTACA+AGG | - | chr8_1:84756461-84756480 | Msa1221210:CDS | 55.0% | |
| ATGGTAGGAGGGGGTAGGAT+TGG | + | chr8_1:84757061-84757080 | None:intergenic | 55.0% | |
| TCCTACCCCCTCCTACCATA+TGG | - | chr8_1:84757062-84757081 | Msa1221210:intron | 55.0% | |
| TCCATATGGTAGGAGGGGGT+AGG | + | chr8_1:84757066-84757085 | None:intergenic | 55.0% | |
| CATGGGGATGGGTGCTAAAG+AGG | - | chr8_1:84757225-84757244 | Msa1221210:intron | 55.0% | |
| TTACAGGGCCTTACAGCCAC+AGG | - | chr8_1:84757381-84757400 | Msa1221210:intron | 55.0% | |
| TACAGGGCCTTACAGCCACA+GGG | - | chr8_1:84757382-84757401 | Msa1221210:intron | 55.0% | |
| GCCATTCCAGTCATGGAGTG+TGG | - | chr8_1:84758322-84758341 | Msa1221210:intron | 55.0% | |
| GCCACACTCCATGACTGGAA+TGG | + | chr8_1:84758326-84758345 | None:intergenic | 55.0% | |
| AGGAAGCCACACTCCATGAC+TGG | + | chr8_1:84758331-84758350 | None:intergenic | 55.0% | |
| CTTGAACCCAGCCCCTCAAT+TGG | - | chr8_1:84758552-84758571 | Msa1221210:intron | 55.0% | |
| GAAAGCTCCAATTGAGGGGC+TGG | + | chr8_1:84758562-84758581 | None:intergenic | 55.0% | |
| CATTATGTGGACCGCCCAGA+TGG | - | chr8_1:84760053-84760072 | Msa1221210:intron | 55.0% | |
| TTGCTGCTGAACTCGCTCAC+AGG | - | chr8_1:84760084-84760103 | Msa1221210:intron | 55.0% | |
| AATTTGGCCTCCACGCTCGT+TGG | + | chr8_1:84760217-84760236 | None:intergenic | 55.0% | |
| TGCTGCGACGCAAATCGAGC+TGG | + | chr8_1:84755710-84755729 | None:intergenic | 60.0% | |
| ! | CCACGCTCGTTGGCATTGGA+AGG | + | chr8_1:84760207-84760226 | None:intergenic | 60.0% |
| CCTTCCAATGCCAACGAGCG+TGG | - | chr8_1:84760204-84760223 | Msa1221210:intron | 60.0% | |
| TCCAATGCCAACGAGCGTGG+AGG | - | chr8_1:84760207-84760226 | Msa1221210:intron | 60.0% | |
| GCCTCCACGCTCGTTGGCAT+TGG | + | chr8_1:84760211-84760230 | None:intergenic | 65.0% | |
| CGGCGGCGACGACGAAGTCC+TGG | + | chr8_1:84755622-84755641 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 84755538 | 84760961 | 84755538 | ID=Msa1221210;Name=Msa1221210 |
| chr8_1 | mRNA | 84755538 | 84760961 | 84755538 | ID=Msa1221210-mRNA-1;Parent=Msa1221210;Name=Msa1221210-mRNA-1;_AED=0.01;_eAED=0.01;_QI=129|1|1|1|0.83|0.71|7|636|279 |
| chr8_1 | exon | 84755538 | 84756483 | 84755538 | ID=Msa1221210-mRNA-1:exon:30454;Parent=Msa1221210-mRNA-1 |
| chr8_1 | exon | 84757789 | 84757997 | 84757789 | ID=Msa1221210-mRNA-1:exon:30453;Parent=Msa1221210-mRNA-1 |
| chr8_1 | exon | 84758645 | 84758737 | 84758645 | ID=Msa1221210-mRNA-1:exon:30452;Parent=Msa1221210-mRNA-1 |
| chr8_1 | exon | 84759002 | 84759112 | 84759002 | ID=Msa1221210-mRNA-1:exon:30451;Parent=Msa1221210-mRNA-1 |
| chr8_1 | exon | 84759963 | 84760030 | 84759963 | ID=Msa1221210-mRNA-1:exon:30450;Parent=Msa1221210-mRNA-1 |
| chr8_1 | exon | 84760627 | 84760694 | 84760627 | ID=Msa1221210-mRNA-1:exon:30449;Parent=Msa1221210-mRNA-1 |
| chr8_1 | exon | 84760852 | 84760961 | 84760852 | ID=Msa1221210-mRNA-1:exon:30448;Parent=Msa1221210-mRNA-1 |
| chr8_1 | five_prime_UTR | 84760852 | 84760961 | 84760852 | ID=Msa1221210-mRNA-1:five_prime_utr;Parent=Msa1221210-mRNA-1 |
| chr8_1 | five_prime_UTR | 84760676 | 84760694 | 84760676 | ID=Msa1221210-mRNA-1:five_prime_utr;Parent=Msa1221210-mRNA-1 |
| chr8_1 | CDS | 84760627 | 84760675 | 84760627 | ID=Msa1221210-mRNA-1:cds;Parent=Msa1221210-mRNA-1 |
| chr8_1 | CDS | 84759963 | 84760030 | 84759963 | ID=Msa1221210-mRNA-1:cds;Parent=Msa1221210-mRNA-1 |
| chr8_1 | CDS | 84759002 | 84759112 | 84759002 | ID=Msa1221210-mRNA-1:cds;Parent=Msa1221210-mRNA-1 |
| chr8_1 | CDS | 84758645 | 84758737 | 84758645 | ID=Msa1221210-mRNA-1:cds;Parent=Msa1221210-mRNA-1 |
| chr8_1 | CDS | 84757789 | 84757997 | 84757789 | ID=Msa1221210-mRNA-1:cds;Parent=Msa1221210-mRNA-1 |
| chr8_1 | CDS | 84756174 | 84756483 | 84756174 | ID=Msa1221210-mRNA-1:cds;Parent=Msa1221210-mRNA-1 |
| chr8_1 | three_prime_UTR | 84755538 | 84756173 | 84755538 | ID=Msa1221210-mRNA-1:three_prime_utr;Parent=Msa1221210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
