Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222060 | sp|Q9SUD5|WTR36_ARATH | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.25e-105 | 316 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222060 | A0A072URZ6 | 96.757 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 0.0 | 732 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0094940 | Msa1222060 | 0.807438 | 5.054029e-50 | -8.615850e-47 |
Msa0756510 | Msa1222060 | 0.830135 | 3.481840e-55 | -8.615850e-47 |
Msa0835450 | Msa1222060 | 0.812663 | 3.786345e-51 | -8.615850e-47 |
Msa0304270 | Msa1222060 | 0.816108 | 6.552531e-52 | -8.615850e-47 |
Msa1221480 | Msa1222060 | 0.978059 | 4.855668e-145 | -8.615850e-47 |
Msa1222060 | Msa1264890 | 0.930550 | 1.391866e-93 | -8.615850e-47 |
Msa1222060 | Msa1303200 | 0.961141 | 2.332699e-119 | -8.615850e-47 |
Msa0884620 | Msa1222060 | -0.820591 | 6.327076e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222060 | MtrunA17_Chr4g0073241 | 96.757 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 0.0 | 732 |
Msa1222060 | MtrunA17_Chr8g0334761 | 51.087 | 368 | 169 | 8 | 1 | 360 | 1 | 365 | 1.14e-122 | 358 |
Msa1222060 | MtrunA17_Chr2g0310441 | 46.849 | 365 | 181 | 3 | 4 | 356 | 6 | 369 | 1.46e-109 | 325 |
Msa1222060 | MtrunA17_Chr8g0334771 | 48.541 | 377 | 183 | 6 | 1 | 370 | 1 | 373 | 7.52e-109 | 323 |
Msa1222060 | MtrunA17_Chr8g0334751 | 48.634 | 366 | 171 | 6 | 2 | 360 | 3 | 358 | 5.97e-106 | 315 |
Msa1222060 | MtrunA17_Chr7g0271561 | 34.211 | 342 | 201 | 5 | 8 | 334 | 7 | 339 | 8.06e-65 | 211 |
Msa1222060 | MtrunA17_Chr1g0182291 | 33.131 | 329 | 210 | 5 | 16 | 340 | 23 | 345 | 1.45e-62 | 204 |
Msa1222060 | MtrunA17_Chr1g0164831 | 34.320 | 338 | 214 | 4 | 10 | 344 | 5 | 337 | 1.98e-62 | 203 |
Msa1222060 | MtrunA17_Chr2g0284261 | 32.670 | 352 | 219 | 5 | 1 | 339 | 1 | 347 | 2.08e-62 | 204 |
Msa1222060 | MtrunA17_Chr6g0463971 | 34.066 | 364 | 214 | 7 | 4 | 352 | 5 | 357 | 2.52e-61 | 201 |
Msa1222060 | MtrunA17_Chr3g0142131 | 34.218 | 377 | 215 | 8 | 13 | 363 | 25 | 394 | 1.76e-60 | 199 |
Msa1222060 | MtrunA17_Chr1g0155761 | 33.333 | 378 | 220 | 7 | 11 | 361 | 24 | 396 | 2.94e-60 | 199 |
Msa1222060 | MtrunA17_Chr2g0278541 | 31.536 | 371 | 237 | 7 | 3 | 361 | 7 | 372 | 2.24e-59 | 197 |
Msa1222060 | MtrunA17_Chr6g0483401 | 34.211 | 342 | 212 | 5 | 17 | 350 | 19 | 355 | 3.13e-59 | 195 |
Msa1222060 | MtrunA17_Chr2g0290611 | 35.501 | 369 | 216 | 9 | 4 | 361 | 8 | 365 | 4.12e-59 | 195 |
Msa1222060 | MtrunA17_Chr3g0081511 | 36.503 | 326 | 196 | 5 | 13 | 332 | 22 | 342 | 4.41e-59 | 196 |
Msa1222060 | MtrunA17_Chr1g0186611 | 33.237 | 346 | 209 | 6 | 11 | 345 | 19 | 353 | 5.85e-59 | 194 |
Msa1222060 | MtrunA17_Chr3g0081421 | 33.069 | 378 | 225 | 10 | 11 | 369 | 20 | 388 | 2.53e-58 | 194 |
Msa1222060 | MtrunA17_Chr1g0160111 | 30.812 | 357 | 216 | 7 | 17 | 352 | 16 | 362 | 7.23e-58 | 192 |
Msa1222060 | MtrunA17_Chr8g0354121 | 31.044 | 364 | 237 | 6 | 13 | 369 | 18 | 374 | 1.10e-57 | 192 |
Msa1222060 | MtrunA17_Chr1g0186641 | 34.218 | 339 | 211 | 5 | 11 | 344 | 16 | 347 | 1.80e-57 | 190 |
Msa1222060 | MtrunA17_Chr2g0278561 | 31.915 | 376 | 238 | 7 | 4 | 367 | 11 | 380 | 5.26e-57 | 191 |
Msa1222060 | MtrunA17_Chr8g0334711 | 50.476 | 210 | 92 | 5 | 1 | 204 | 1 | 204 | 1.58e-56 | 184 |
Msa1222060 | MtrunA17_Chr7g0255561 | 31.269 | 323 | 209 | 4 | 13 | 327 | 19 | 336 | 4.06e-56 | 188 |
Msa1222060 | MtrunA17_Chr7g0255581 | 31.269 | 323 | 209 | 4 | 13 | 327 | 19 | 336 | 4.06e-56 | 188 |
Msa1222060 | MtrunA17_Chr1g0186561 | 33.036 | 336 | 220 | 3 | 11 | 344 | 19 | 351 | 4.36e-56 | 187 |
Msa1222060 | MtrunA17_Chr7g0263101 | 32.394 | 355 | 216 | 9 | 16 | 362 | 21 | 359 | 7.62e-56 | 187 |
Msa1222060 | MtrunA17_Chr3g0129591 | 32.873 | 362 | 227 | 8 | 1 | 354 | 1 | 354 | 1.82e-55 | 186 |
Msa1222060 | MtrunA17_Chr8g0383731 | 33.043 | 345 | 212 | 5 | 11 | 346 | 8 | 342 | 2.28e-55 | 185 |
Msa1222060 | MtrunA17_Chr3g0129571 | 30.387 | 362 | 235 | 7 | 1 | 353 | 3 | 356 | 7.33e-55 | 184 |
Msa1222060 | MtrunA17_Chr1g0186601 | 32.849 | 344 | 206 | 8 | 3 | 333 | 11 | 342 | 1.02e-54 | 183 |
Msa1222060 | MtrunA17_Chr3g0129601 | 31.395 | 344 | 224 | 5 | 1 | 338 | 25 | 362 | 1.58e-54 | 183 |
Msa1222060 | MtrunA17_Chr1g0171301 | 32.647 | 340 | 219 | 6 | 11 | 344 | 19 | 354 | 1.30e-53 | 181 |
Msa1222060 | MtrunA17_Chr2g0278551 | 32.908 | 392 | 227 | 10 | 4 | 369 | 8 | 389 | 1.63e-53 | 181 |
Msa1222060 | MtrunA17_Chr1g0184221 | 30.532 | 357 | 221 | 8 | 10 | 350 | 22 | 367 | 2.69e-53 | 180 |
Msa1222060 | MtrunA17_Chr2g0332001 | 32.665 | 349 | 221 | 8 | 4 | 345 | 34 | 375 | 5.55e-53 | 180 |
Msa1222060 | MtrunA17_Chr1g0186571 | 31.728 | 353 | 215 | 8 | 11 | 353 | 16 | 352 | 9.63e-52 | 176 |
Msa1222060 | MtrunA17_Chr3g0126101 | 33.968 | 315 | 198 | 5 | 23 | 334 | 21 | 328 | 1.97e-51 | 174 |
Msa1222060 | MtrunA17_Chr4g0059311 | 33.333 | 315 | 196 | 6 | 33 | 339 | 37 | 345 | 4.01e-50 | 171 |
Msa1222060 | MtrunA17_Chr1g0160171 | 29.799 | 349 | 235 | 5 | 3 | 347 | 11 | 353 | 4.83e-50 | 172 |
Msa1222060 | MtrunA17_Chr3g0114691 | 28.909 | 339 | 230 | 5 | 11 | 343 | 23 | 356 | 4.94e-50 | 172 |
Msa1222060 | MtrunA17_Chr3g0114731 | 30.571 | 350 | 229 | 6 | 11 | 354 | 21 | 362 | 2.29e-49 | 171 |
Msa1222060 | MtrunA17_Chr3g0114711 | 29.581 | 382 | 216 | 10 | 14 | 351 | 20 | 392 | 5.41e-49 | 169 |
Msa1222060 | MtrunA17_Chr4g0050881 | 31.198 | 359 | 218 | 9 | 11 | 357 | 12 | 353 | 2.13e-48 | 167 |
Msa1222060 | MtrunA17_Chr5g0413961 | 32.432 | 333 | 209 | 6 | 28 | 359 | 34 | 351 | 5.90e-48 | 166 |
Msa1222060 | MtrunA17_Chr1g0160181 | 29.301 | 372 | 236 | 7 | 11 | 359 | 21 | 388 | 1.91e-45 | 160 |
Msa1222060 | MtrunA17_Chr8g0334721 | 50.714 | 140 | 68 | 1 | 220 | 358 | 1 | 140 | 5.15e-45 | 152 |
Msa1222060 | MtrunA17_Chr5g0407991 | 30.871 | 379 | 230 | 8 | 1 | 362 | 3 | 366 | 7.82e-45 | 158 |
Msa1222060 | MtrunA17_Chr7g0227921 | 31.563 | 339 | 208 | 7 | 28 | 350 | 31 | 361 | 7.66e-44 | 155 |
Msa1222060 | MtrunA17_Chr3g0129581 | 30.769 | 364 | 232 | 8 | 1 | 354 | 1 | 354 | 8.63e-44 | 155 |
Msa1222060 | MtrunA17_Chr4g0051021 | 31.515 | 330 | 219 | 5 | 10 | 335 | 16 | 342 | 3.49e-43 | 154 |
Msa1222060 | MtrunA17_Chr8g0334731 | 53.425 | 146 | 63 | 3 | 63 | 204 | 44 | 188 | 8.35e-42 | 145 |
Msa1222060 | MtrunA17_Chr5g0413941 | 30.422 | 332 | 226 | 4 | 5 | 334 | 4 | 332 | 9.14e-42 | 149 |
Msa1222060 | MtrunA17_Chr5g0413921 | 32.537 | 335 | 217 | 6 | 4 | 334 | 3 | 332 | 1.12e-41 | 149 |
Msa1222060 | MtrunA17_Chr5g0407971 | 30.137 | 365 | 232 | 6 | 3 | 349 | 6 | 365 | 2.63e-41 | 149 |
Msa1222060 | MtrunA17_Chr4g0050891 | 29.969 | 327 | 217 | 4 | 4 | 322 | 9 | 331 | 3.90e-41 | 148 |
Msa1222060 | MtrunA17_Chr5g0441761 | 30.088 | 339 | 223 | 6 | 13 | 349 | 19 | 345 | 3.11e-40 | 145 |
Msa1222060 | MtrunA17_Chr1g0150151 | 31.892 | 370 | 223 | 9 | 1 | 350 | 1 | 361 | 3.69e-40 | 145 |
Msa1222060 | MtrunA17_Chr3g0114701 | 28.446 | 341 | 235 | 5 | 11 | 345 | 12 | 349 | 9.77e-40 | 145 |
Msa1222060 | MtrunA17_Chr6g0451261 | 32.632 | 285 | 183 | 4 | 28 | 308 | 31 | 310 | 1.29e-39 | 149 |
Msa1222060 | MtrunA17_Chr4g0050941 | 29.683 | 347 | 227 | 4 | 10 | 344 | 14 | 355 | 2.78e-39 | 144 |
Msa1222060 | MtrunA17_Chr6g0451211 | 29.700 | 367 | 234 | 10 | 8 | 367 | 12 | 361 | 1.12e-38 | 141 |
Msa1222060 | MtrunA17_Chr5g0408031 | 29.769 | 346 | 216 | 7 | 27 | 353 | 29 | 366 | 2.95e-38 | 140 |
Msa1222060 | MtrunA17_Chr5g0413931 | 30.380 | 316 | 213 | 5 | 28 | 339 | 26 | 338 | 4.15e-38 | 139 |
Msa1222060 | MtrunA17_Chr5g0413951 | 30.065 | 306 | 209 | 4 | 28 | 331 | 27 | 329 | 1.05e-37 | 139 |
Msa1222060 | MtrunA17_Chr5g0408041 | 28.609 | 381 | 239 | 7 | 1 | 362 | 4 | 370 | 1.11e-37 | 139 |
Msa1222060 | MtrunA17_Chr5g0428881 | 28.152 | 341 | 231 | 5 | 13 | 347 | 23 | 355 | 1.66e-37 | 139 |
Msa1222060 | MtrunA17_Chr6g0451201 | 32.312 | 359 | 224 | 8 | 11 | 367 | 15 | 356 | 3.86e-37 | 137 |
Msa1222060 | MtrunA17_Chr1g0211801 | 32.685 | 257 | 152 | 5 | 8 | 256 | 13 | 256 | 5.73e-37 | 134 |
Msa1222060 | MtrunA17_Chr4g0050931 | 28.571 | 343 | 186 | 8 | 4 | 333 | 8 | 304 | 1.72e-36 | 134 |
Msa1222060 | MtrunA17_Chr6g0451171 | 29.706 | 340 | 229 | 5 | 7 | 343 | 11 | 343 | 3.73e-36 | 135 |
Msa1222060 | MtrunA17_Chr5g0408001 | 29.375 | 320 | 205 | 5 | 25 | 327 | 27 | 342 | 8.26e-36 | 134 |
Msa1222060 | MtrunA17_Chr3g0084091 | 32.155 | 283 | 172 | 6 | 93 | 366 | 12 | 283 | 2.71e-35 | 131 |
Msa1222060 | MtrunA17_Chr2g0278021 | 36.638 | 232 | 135 | 4 | 125 | 345 | 1 | 231 | 5.09e-35 | 129 |
Msa1222060 | MtrunA17_Chr4g0051001 | 30.693 | 303 | 198 | 6 | 10 | 305 | 33 | 330 | 9.37e-34 | 127 |
Msa1222060 | MtrunA17_Chr6g0451251 | 29.830 | 352 | 229 | 8 | 21 | 369 | 26 | 362 | 3.85e-33 | 127 |
Msa1222060 | MtrunA17_Chr5g0429001 | 28.378 | 296 | 200 | 4 | 78 | 366 | 18 | 308 | 7.42e-33 | 125 |
Msa1222060 | MtrunA17_Chr3g0126091 | 27.933 | 358 | 243 | 5 | 7 | 361 | 13 | 358 | 1.19e-32 | 125 |
Msa1222060 | MtrunA17_Chr8g0369841 | 29.003 | 331 | 212 | 6 | 25 | 337 | 26 | 351 | 1.46e-31 | 122 |
Msa1222060 | MtrunA17_Chr5g0404811 | 29.317 | 249 | 156 | 7 | 125 | 360 | 7 | 248 | 3.05e-30 | 116 |
Msa1222060 | MtrunA17_Chr5g0399281 | 29.223 | 373 | 222 | 10 | 1 | 356 | 1 | 348 | 9.69e-30 | 117 |
Msa1222060 | MtrunA17_Chr6g0451191 | 30.137 | 219 | 150 | 2 | 126 | 343 | 2 | 218 | 4.08e-27 | 107 |
Msa1222060 | MtrunA17_Chr4g0056081 | 30.267 | 337 | 209 | 11 | 13 | 333 | 19 | 345 | 2.58e-26 | 107 |
Msa1222060 | MtrunA17_Chr8g0334741 | 40.645 | 155 | 53 | 5 | 220 | 360 | 1 | 130 | 6.35e-24 | 95.9 |
Msa1222060 | MtrunA17_Chr1g0177221 | 26.295 | 251 | 181 | 2 | 7 | 256 | 17 | 264 | 3.03e-23 | 97.8 |
Msa1222060 | MtrunA17_Chr1g0172891 | 34.444 | 90 | 59 | 0 | 264 | 353 | 15 | 104 | 2.61e-15 | 71.6 |
Msa1222060 | MtrunA17_Chr1g0177231 | 36.364 | 88 | 56 | 0 | 264 | 351 | 37 | 124 | 3.71e-15 | 71.6 |
Msa1222060 | MtrunA17_Chr1g0211811 | 35.632 | 87 | 55 | 1 | 258 | 344 | 2 | 87 | 2.09e-13 | 65.5 |
Msa1222060 | MtrunA17_Chr1g0182261 | 27.703 | 148 | 102 | 4 | 199 | 342 | 79 | 225 | 1.07e-11 | 64.3 |
Msa1222060 | MtrunA17_Chr5g0404801 | 38.889 | 108 | 63 | 1 | 16 | 123 | 15 | 119 | 1.26e-11 | 61.6 |
Msa1222060 | MtrunA17_Chr4g0050911 | 33.071 | 127 | 73 | 3 | 91 | 206 | 11 | 136 | 2.39e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1222060 | AT4G30420.2 | 43.968 | 373 | 194 | 6 | 1 | 360 | 1 | 371 | 1.05e-107 | 321 |
Msa1222060 | AT4G28040.1 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
Msa1222060 | AT4G28040.5 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
Msa1222060 | AT4G28040.3 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
Msa1222060 | AT4G28040.4 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
Msa1222060 | AT4G28040.2 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
Msa1222060 | AT4G30420.1 | 43.956 | 364 | 189 | 6 | 11 | 361 | 1 | 362 | 8.56e-105 | 313 |
Msa1222060 | AT1G75500.1 | 36.280 | 328 | 193 | 5 | 11 | 327 | 22 | 344 | 3.76e-62 | 204 |
Msa1222060 | AT1G75500.2 | 36.280 | 328 | 193 | 5 | 11 | 327 | 22 | 344 | 3.76e-62 | 204 |
Msa1222060 | AT1G09380.1 | 35.913 | 323 | 198 | 3 | 8 | 324 | 7 | 326 | 1.07e-61 | 202 |
Msa1222060 | AT3G18200.2 | 34.722 | 360 | 212 | 8 | 10 | 361 | 36 | 380 | 2.02e-58 | 194 |
Msa1222060 | AT2G37460.1 | 31.680 | 363 | 224 | 9 | 13 | 361 | 19 | 371 | 3.46e-56 | 188 |
Msa1222060 | AT3G30340.1 | 35.135 | 333 | 196 | 7 | 11 | 334 | 17 | 338 | 5.43e-55 | 185 |
Msa1222060 | AT4G01440.1 | 33.333 | 342 | 217 | 6 | 1 | 336 | 1 | 337 | 1.81e-54 | 183 |
Msa1222060 | AT5G64700.1 | 31.356 | 354 | 228 | 4 | 7 | 351 | 9 | 356 | 2.48e-53 | 180 |
Msa1222060 | AT5G07050.1 | 31.921 | 354 | 214 | 7 | 13 | 347 | 22 | 367 | 1.57e-52 | 179 |
Msa1222060 | AT5G13670.1 | 28.809 | 361 | 235 | 6 | 16 | 366 | 15 | 363 | 2.29e-52 | 178 |
Msa1222060 | AT1G21890.1 | 29.891 | 368 | 228 | 6 | 1 | 355 | 6 | 356 | 3.02e-52 | 178 |
Msa1222060 | AT2G39510.1 | 31.778 | 343 | 215 | 8 | 11 | 341 | 10 | 345 | 1.37e-51 | 176 |
Msa1222060 | AT1G43650.1 | 32.551 | 341 | 220 | 5 | 11 | 349 | 9 | 341 | 3.15e-51 | 174 |
Msa1222060 | AT4G08300.1 | 30.056 | 356 | 229 | 7 | 2 | 347 | 4 | 349 | 4.66e-50 | 172 |
Msa1222060 | AT5G40240.1 | 36.039 | 308 | 183 | 7 | 28 | 327 | 39 | 340 | 5.09e-49 | 169 |
Msa1222060 | AT5G40240.3 | 36.039 | 308 | 183 | 7 | 28 | 327 | 39 | 340 | 5.09e-49 | 169 |
Msa1222060 | AT3G53210.1 | 32.000 | 350 | 222 | 6 | 11 | 353 | 12 | 352 | 8.29e-49 | 169 |
Msa1222060 | AT2G40900.1 | 30.488 | 328 | 212 | 6 | 13 | 334 | 15 | 332 | 9.46e-49 | 169 |
Msa1222060 | AT5G40240.2 | 36.039 | 308 | 183 | 7 | 28 | 327 | 53 | 354 | 1.16e-48 | 169 |
Msa1222060 | AT5G40230.1 | 34.925 | 335 | 189 | 8 | 28 | 343 | 40 | 364 | 3.10e-48 | 167 |
Msa1222060 | AT4G01430.1 | 32.653 | 343 | 211 | 10 | 28 | 355 | 28 | 365 | 3.51e-48 | 167 |
Msa1222060 | AT1G11460.1 | 33.025 | 324 | 209 | 5 | 10 | 329 | 17 | 336 | 2.23e-47 | 164 |
Msa1222060 | AT4G01440.3 | 31.949 | 313 | 203 | 5 | 1 | 308 | 1 | 308 | 8.50e-47 | 162 |
Msa1222060 | AT1G44800.1 | 29.014 | 355 | 239 | 5 | 2 | 350 | 4 | 351 | 8.71e-47 | 163 |
Msa1222060 | AT1G11450.3 | 31.378 | 341 | 221 | 5 | 10 | 344 | 17 | 350 | 3.43e-46 | 161 |
Msa1222060 | AT4G08290.1 | 30.000 | 360 | 236 | 8 | 11 | 361 | 15 | 367 | 5.29e-46 | 162 |
Msa1222060 | AT1G11450.5 | 32.797 | 311 | 190 | 6 | 43 | 344 | 6 | 306 | 2.52e-45 | 158 |
Msa1222060 | AT1G11450.2 | 34.926 | 272 | 167 | 4 | 79 | 344 | 32 | 299 | 7.47e-44 | 154 |
Msa1222060 | AT1G01070.1 | 29.565 | 345 | 233 | 5 | 4 | 344 | 11 | 349 | 3.87e-43 | 154 |
Msa1222060 | AT3G56620.1 | 28.754 | 313 | 216 | 4 | 13 | 324 | 15 | 321 | 1.30e-42 | 152 |
Msa1222060 | AT1G68170.1 | 31.304 | 345 | 224 | 5 | 10 | 348 | 4 | 341 | 1.60e-42 | 152 |
Msa1222060 | AT1G68170.2 | 31.304 | 345 | 224 | 5 | 10 | 348 | 14 | 351 | 1.90e-42 | 152 |
Msa1222060 | AT2G37450.2 | 29.261 | 352 | 211 | 7 | 1 | 347 | 1 | 319 | 3.51e-42 | 150 |
Msa1222060 | AT1G11450.1 | 35.249 | 261 | 159 | 4 | 90 | 344 | 2 | 258 | 5.69e-42 | 147 |
Msa1222060 | AT1G21890.2 | 30.408 | 319 | 199 | 6 | 1 | 305 | 6 | 315 | 1.06e-40 | 147 |
Msa1222060 | AT3G28050.1 | 29.971 | 347 | 225 | 7 | 28 | 369 | 31 | 364 | 1.14e-40 | 147 |
Msa1222060 | AT3G53210.2 | 32.482 | 274 | 174 | 4 | 86 | 353 | 27 | 295 | 1.62e-40 | 145 |
Msa1222060 | AT4G01440.5 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.83e-40 | 143 |
Msa1222060 | AT4G01440.2 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.83e-40 | 143 |
Msa1222060 | AT1G01070.2 | 32.593 | 270 | 175 | 4 | 79 | 344 | 36 | 302 | 8.31e-40 | 144 |
Msa1222060 | AT3G18200.1 | 34.733 | 262 | 151 | 7 | 108 | 361 | 1 | 250 | 4.47e-39 | 140 |
Msa1222060 | AT4G15540.1 | 34.251 | 327 | 189 | 7 | 28 | 343 | 36 | 347 | 1.34e-38 | 141 |
Msa1222060 | AT4G15540.2 | 34.251 | 327 | 189 | 7 | 28 | 343 | 36 | 347 | 1.34e-38 | 141 |
Msa1222060 | AT4G01450.2 | 31.871 | 342 | 222 | 6 | 1 | 338 | 1 | 335 | 1.05e-37 | 139 |
Msa1222060 | AT5G40210.1 | 30.887 | 327 | 200 | 6 | 5 | 327 | 10 | 314 | 2.11e-37 | 138 |
Msa1222060 | AT4G01440.4 | 33.077 | 260 | 165 | 4 | 1 | 256 | 1 | 255 | 2.68e-37 | 135 |
Msa1222060 | AT4G01430.2 | 32.753 | 287 | 180 | 8 | 27 | 305 | 27 | 308 | 5.72e-37 | 136 |
Msa1222060 | AT3G28070.2 | 31.907 | 257 | 166 | 4 | 94 | 345 | 7 | 259 | 1.63e-36 | 134 |
Msa1222060 | AT1G25270.1 | 27.011 | 348 | 243 | 6 | 9 | 351 | 3 | 344 | 2.05e-36 | 135 |
Msa1222060 | AT3G28130.5 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.38e-36 | 133 |
Msa1222060 | AT3G28130.1 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.38e-36 | 133 |
Msa1222060 | AT3G28070.1 | 31.907 | 257 | 166 | 4 | 94 | 345 | 99 | 351 | 1.01e-35 | 134 |
Msa1222060 | AT3G28130.2 | 30.682 | 264 | 172 | 4 | 94 | 349 | 95 | 355 | 1.38e-35 | 133 |
Msa1222060 | AT3G45870.1 | 30.793 | 328 | 204 | 7 | 11 | 322 | 14 | 334 | 2.91e-35 | 133 |
Msa1222060 | AT1G11450.4 | 30.795 | 302 | 196 | 5 | 10 | 305 | 17 | 311 | 8.76e-35 | 130 |
Msa1222060 | AT3G28100.1 | 33.198 | 247 | 156 | 4 | 94 | 335 | 96 | 338 | 2.21e-34 | 130 |
Msa1222060 | AT4G01450.1 | 30.844 | 308 | 203 | 5 | 1 | 305 | 1 | 301 | 3.01e-34 | 129 |
Msa1222060 | AT2G37450.3 | 31.102 | 254 | 161 | 5 | 99 | 347 | 3 | 247 | 4.34e-34 | 127 |
Msa1222060 | AT5G45370.1 | 27.327 | 333 | 219 | 6 | 27 | 356 | 38 | 350 | 1.13e-33 | 128 |
Msa1222060 | AT3G28080.5 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
Msa1222060 | AT3G28080.7 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
Msa1222060 | AT3G28080.8 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
Msa1222060 | AT3G28080.6 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
Msa1222060 | AT5G47470.1 | 28.852 | 357 | 224 | 8 | 11 | 357 | 28 | 364 | 3.04e-33 | 127 |
Msa1222060 | AT5G47470.2 | 28.852 | 357 | 224 | 8 | 11 | 357 | 56 | 392 | 4.39e-33 | 127 |
Msa1222060 | AT5G47470.3 | 29.819 | 332 | 214 | 7 | 11 | 332 | 56 | 378 | 1.11e-32 | 126 |
Msa1222060 | AT3G28080.1 | 29.795 | 292 | 177 | 7 | 57 | 335 | 62 | 338 | 1.45e-32 | 125 |
Msa1222060 | AT3G28080.2 | 31.020 | 245 | 160 | 4 | 96 | 335 | 90 | 330 | 1.50e-32 | 125 |
Msa1222060 | AT4G01430.3 | 33.043 | 230 | 138 | 7 | 140 | 355 | 1 | 228 | 2.21e-32 | 121 |
Msa1222060 | AT3G30340.2 | 32.143 | 252 | 154 | 5 | 11 | 256 | 17 | 257 | 3.07e-32 | 122 |
Msa1222060 | AT4G16620.1 | 30.321 | 343 | 198 | 9 | 34 | 356 | 37 | 358 | 1.10e-31 | 123 |
Msa1222060 | AT4G01450.4 | 32.143 | 252 | 162 | 4 | 1 | 250 | 1 | 245 | 1.70e-31 | 120 |
Msa1222060 | AT5G64700.2 | 29.183 | 257 | 168 | 3 | 7 | 255 | 9 | 259 | 3.93e-31 | 119 |
Msa1222060 | AT5G45370.2 | 26.934 | 349 | 224 | 8 | 27 | 356 | 38 | 374 | 4.96e-31 | 121 |
Msa1222060 | AT5G45370.4 | 26.934 | 349 | 224 | 8 | 27 | 356 | 38 | 374 | 4.96e-31 | 121 |
Msa1222060 | AT3G53210.3 | 31.076 | 251 | 160 | 4 | 11 | 255 | 12 | 255 | 6.13e-31 | 119 |
Msa1222060 | AT1G70260.1 | 26.149 | 348 | 247 | 5 | 23 | 361 | 26 | 372 | 2.01e-30 | 120 |
Msa1222060 | AT1G60050.1 | 27.463 | 335 | 228 | 6 | 23 | 344 | 27 | 359 | 4.01e-30 | 119 |
Msa1222060 | AT3G45870.8 | 29.904 | 311 | 195 | 7 | 11 | 305 | 14 | 317 | 2.81e-29 | 115 |
Msa1222060 | AT4G19185.1 | 28.173 | 323 | 208 | 5 | 27 | 332 | 39 | 354 | 7.40e-29 | 116 |
Msa1222060 | AT1G43650.2 | 32.203 | 236 | 153 | 3 | 11 | 245 | 9 | 238 | 3.72e-28 | 111 |
Msa1222060 | AT3G28070.3 | 31.797 | 217 | 142 | 3 | 94 | 305 | 99 | 314 | 1.03e-27 | 111 |
Msa1222060 | AT3G28130.3 | 28.879 | 232 | 154 | 4 | 126 | 349 | 2 | 230 | 6.58e-27 | 107 |
Msa1222060 | AT3G28070.5 | 30.222 | 225 | 148 | 4 | 126 | 345 | 2 | 222 | 8.52e-27 | 107 |
Msa1222060 | AT4G16620.4 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 1.86e-26 | 106 |
Msa1222060 | AT4G16620.2 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 1.86e-26 | 106 |
Msa1222060 | AT2G37450.1 | 29.825 | 228 | 146 | 5 | 125 | 347 | 62 | 280 | 3.06e-26 | 107 |
Msa1222060 | AT4G19185.2 | 28.679 | 265 | 168 | 4 | 85 | 332 | 16 | 276 | 4.20e-26 | 107 |
Msa1222060 | AT4G24980.1 | 28.155 | 309 | 141 | 9 | 23 | 324 | 1 | 235 | 1.94e-25 | 104 |
Msa1222060 | AT4G01450.3 | 30.837 | 227 | 148 | 4 | 1 | 225 | 1 | 220 | 6.76e-24 | 99.4 |
Msa1222060 | AT3G28080.9 | 29.302 | 215 | 143 | 4 | 126 | 335 | 2 | 212 | 1.18e-23 | 98.2 |
Msa1222060 | AT5G45370.6 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 6.69e-23 | 97.4 |
Msa1222060 | AT5G45370.5 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 6.69e-23 | 97.4 |
Msa1222060 | AT4G08290.2 | 29.921 | 254 | 160 | 6 | 11 | 255 | 15 | 259 | 7.57e-23 | 97.4 |
Msa1222060 | AT3G45870.9 | 30.120 | 249 | 153 | 5 | 11 | 244 | 14 | 256 | 8.32e-22 | 94.4 |
Msa1222060 | AT3G28080.4 | 28.279 | 244 | 114 | 5 | 96 | 335 | 9 | 195 | 7.95e-21 | 90.1 |
Msa1222060 | AT3G28080.3 | 27.491 | 291 | 131 | 8 | 57 | 335 | 62 | 284 | 4.11e-20 | 90.1 |
Msa1222060 | AT3G45870.5 | 28.959 | 221 | 137 | 6 | 118 | 322 | 43 | 259 | 2.34e-18 | 85.1 |
Msa1222060 | AT5G45370.3 | 24.800 | 250 | 160 | 7 | 126 | 356 | 74 | 314 | 1.06e-15 | 77.8 |
Msa1222060 | AT4G16620.3 | 31.720 | 186 | 114 | 3 | 34 | 214 | 37 | 214 | 4.94e-14 | 72.0 |
Msa1222060 | AT3G28100.3 | 32.484 | 157 | 100 | 3 | 94 | 245 | 96 | 251 | 7.31e-14 | 71.6 |
Msa1222060 | AT3G28130.4 | 27.607 | 163 | 114 | 2 | 94 | 252 | 95 | 257 | 6.56e-13 | 68.6 |
Msa1222060 | AT3G45870.6 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.13e-13 | 68.2 |
Msa1222060 | AT3G45870.7 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.13e-13 | 68.2 |
Msa1222060 | AT3G28100.2 | 32.692 | 156 | 97 | 3 | 94 | 245 | 96 | 247 | 4.95e-12 | 65.9 |
Msa1222060 | AT3G45870.2 | 28.161 | 174 | 114 | 5 | 156 | 322 | 14 | 183 | 8.93e-12 | 64.7 |
Find 91 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGTATTTGCAGCAATTT+TGG | 0.062039 | 8_1:+86262672 | Msa1222060:CDS |
GCATTGCTTGGTTAGAAATT+TGG | 0.149475 | 8_1:-86264121 | None:intergenic |
TTCAGTTTGGTAGGGGCTTT+TGG | 0.178567 | 8_1:+86263738 | Msa1222060:intron |
AGAAACGTGGCAAAGATATT+AGG | 0.189542 | 8_1:+86262858 | Msa1222060:CDS |
ATGTTTATGACCTCTCTTAT+TGG | 0.223884 | 8_1:+86262460 | Msa1222060:CDS |
TGGAGATGATACTTGGATTC+TGG | 0.226586 | 8_1:+86262989 | Msa1222060:CDS |
ATCTAGACAACAGCACAAAA+TGG | 0.278735 | 8_1:+86262102 | Msa1222060:exon |
TTTAGTCTCATCAAAGTCTT+TGG | 0.286160 | 8_1:-86263799 | None:intergenic |
AAATAAATTAAATGTGAAAT+AGG | 0.288457 | 8_1:-86262031 | None:intergenic |
ATTCTGACTTATCTGTTAGA+AGG | 0.294692 | 8_1:-86263887 | None:intergenic |
CCAGAAATTACATGAAAATA+TGG | 0.307414 | 8_1:-86264232 | None:intergenic |
CTATCATTAGTGTAGTCATT+AGG | 0.312030 | 8_1:-86263934 | None:intergenic |
ATTCAGTCCTGGTGCATATC+AGG | 0.317727 | 8_1:+86263451 | Msa1222060:CDS |
TTGTGTCTCTTATCACTTAA+GGG | 0.322264 | 8_1:-86264301 | None:intergenic |
TGTTTATGACCTCTCTTATT+GGG | 0.323265 | 8_1:+86262461 | Msa1222060:CDS |
GTTGTGTCTCTTATCACTTA+AGG | 0.324312 | 8_1:-86264302 | None:intergenic |
CACAAAATGGGTGGTTTAGA+TGG | 0.327452 | 8_1:+86262115 | Msa1222060:exon |
CATTGCTTGGTTAGAAATTT+GGG | 0.330134 | 8_1:-86264120 | None:intergenic |
TAAGAAATTGAGAGATATAT+AGG | 0.332436 | 8_1:+86264262 | Msa1222060:three_prime_UTR |
ACAAGAGCTGCTCTATTAGA+TGG | 0.337322 | 8_1:+86262199 | Msa1222060:CDS |
AAGAGGAGAATCTTCAAGTA+TGG | 0.355050 | 8_1:+86263261 | Msa1222060:CDS |
CAATGTATAACTCTTCTTGT+AGG | 0.355635 | 8_1:-86263546 | None:intergenic |
GACTACACTAATGATAGTTT+TGG | 0.367052 | 8_1:+86263940 | Msa1222060:three_prime_UTR |
CTTACAGTAATGGTTATGAT+AGG | 0.367931 | 8_1:+86262142 | Msa1222060:CDS |
TATCATTAGTGTAGTCATTA+GGG | 0.369010 | 8_1:-86263933 | None:intergenic |
AATAAGTAATAGGATAGATT+TGG | 0.374484 | 8_1:+86263857 | Msa1222060:CDS |
TCCACTTGCAGTGAGATGTT+TGG | 0.383985 | 8_1:-86262970 | None:intergenic |
GCAGTGAGATGTTTGGAATC+AGG | 0.387074 | 8_1:-86262963 | None:intergenic |
TTTGAGAAATGCCATGGTTA+AGG | 0.391804 | 8_1:-86262904 | None:intergenic |
AAGAAATTGAGAGATATATA+GGG | 0.396779 | 8_1:+86264263 | Msa1222060:three_prime_UTR |
AGGATGATGAAATAAGTAAT+AGG | 0.399706 | 8_1:+86263847 | Msa1222060:CDS |
CCACAGTCTTTGTTGTGTAT+AGG | 0.403014 | 8_1:+86262230 | Msa1222060:CDS |
GAAACGTGGCAAAGATATTA+GGG | 0.403244 | 8_1:+86262859 | Msa1222060:CDS |
CTGCAAGTGGAGATGATACT+TGG | 0.425884 | 8_1:+86262982 | Msa1222060:CDS |
GGAGATGATACTTGGATTCT+GGG | 0.425968 | 8_1:+86262990 | Msa1222060:CDS |
TTCTGACTTATCTGTTAGAA+GGG | 0.439173 | 8_1:-86263886 | None:intergenic |
TTATTTGATGAAAAGATGAT+AGG | 0.443878 | 8_1:-86262280 | None:intergenic |
GCCGATTTCTTCATCCTGTC+CGG | 0.445443 | 8_1:+86263169 | Msa1222060:CDS |
AGCTACTGTCATCACAGCTT+TGG | 0.447218 | 8_1:+86263510 | Msa1222060:CDS |
TCATCCATTTCAGTTTGGTA+GGG | 0.451556 | 8_1:+86263730 | Msa1222060:intron |
CTAGCTTCTTCATTCAGTCC+TGG | 0.455175 | 8_1:+86263440 | Msa1222060:CDS |
GGTTGAACATTACACAATAC+AGG | 0.477467 | 8_1:-86263483 | None:intergenic |
AGGCATAGCCACTTTGGCAT+TGG | 0.478172 | 8_1:+86262255 | Msa1222060:CDS |
CATCCATTTCAGTTTGGTAG+GGG | 0.480532 | 8_1:+86263731 | Msa1222060:intron |
GAGCGGAATAATGCATTGCT+TGG | 0.485227 | 8_1:-86264133 | None:intergenic |
GTGGTTTGTATATTGTGCTA+TGG | 0.486759 | 8_1:+86263769 | Msa1222060:CDS |
AGATGGTTATCTTACAGTAA+TGG | 0.489887 | 8_1:+86262132 | Msa1222060:CDS |
TGGTTTGTATATTGTGCTAT+GGG | 0.491355 | 8_1:+86263770 | Msa1222060:CDS |
TCTAGACAACAGCACAAAAT+GGG | 0.499414 | 8_1:+86262103 | Msa1222060:exon |
AAAGTCGATAATATATGATC+CGG | 0.500385 | 8_1:-86263188 | None:intergenic |
GCTTCACACTAAGTTAATTG+AGG | 0.503095 | 8_1:-86262078 | None:intergenic |
TAGGCAAGGCATAGCCACTT+TGG | 0.512689 | 8_1:+86262249 | Msa1222060:CDS |
TCATCCTGCATTTGTGATTG+TGG | 0.514775 | 8_1:-86263831 | None:intergenic |
TTTATTCTATGCTTCTTCTA+CGG | 0.516850 | 8_1:+86262612 | Msa1222060:CDS |
TCCGGACAGGATGAAGAAAT+CGG | 0.517527 | 8_1:-86263170 | None:intergenic |
TCACTTAAGGGTGTCCACTT+TGG | 0.522779 | 8_1:-86264289 | None:intergenic |
CGATAATATATGATCCGGAC+AGG | 0.524346 | 8_1:-86263183 | None:intergenic |
ATCATCCATTTCAGTTTGGT+AGG | 0.527344 | 8_1:+86263729 | Msa1222060:intron |
GTCTTTGTTGTGTATAGGCA+AGG | 0.528821 | 8_1:+86262235 | Msa1222060:CDS |
TCCAAACATCTCACTGCAAG+TGG | 0.528954 | 8_1:+86262969 | Msa1222060:CDS |
GCTACCACAATCACAAATGC+AGG | 0.537389 | 8_1:+86263827 | Msa1222060:CDS |
GCAAATACAAAGGTTAATGC+AGG | 0.537415 | 8_1:-86262661 | None:intergenic |
CTACAAGAAGAGTTATACAT+TGG | 0.540322 | 8_1:+86263547 | Msa1222060:CDS |
AAACTGCATGAAATTTGTAA+AGG | 0.542858 | 8_1:-86263296 | None:intergenic |
AAGAAGAGTTATACATTGGA+AGG | 0.556408 | 8_1:+86263551 | Msa1222060:CDS |
ATTTCCTTTGAGAAATGCCA+TGG | 0.560886 | 8_1:-86262910 | None:intergenic |
TGCAGGTATCAAATTACTCA+TGG | 0.563637 | 8_1:-86262644 | None:intergenic |
TCCTGGTGCATATCAGGAAG+AGG | 0.567080 | 8_1:+86263457 | Msa1222060:CDS |
GATATATAGGGACGCCAAAG+TGG | 0.575933 | 8_1:+86264275 | Msa1222060:three_prime_UTR |
TTAACCATGGCATTTCTCAA+AGG | 0.576574 | 8_1:+86262906 | Msa1222060:CDS |
ACCTCTTCCTGATATGCACC+AGG | 0.580892 | 8_1:-86263458 | None:intergenic |
TAGAGCAGCTCTTGTAAACA+TGG | 0.582032 | 8_1:-86262191 | None:intergenic |
TATATTTGCACTGATCAAAG+AGG | 0.589339 | 8_1:+86263244 | Msa1222060:CDS |
TATCAAATTACTCATGGCAG+TGG | 0.593988 | 8_1:-86262638 | None:intergenic |
GGGACAATATGTTGTGTCAG+TGG | 0.597289 | 8_1:+86262879 | Msa1222060:CDS |
CTGTGATGACAGTAGCTAGA+GGG | 0.598316 | 8_1:-86263504 | None:intergenic |
TCTGACTTATCTGTTAGAAG+GGG | 0.613530 | 8_1:-86263885 | None:intergenic |
TCTTCGAAGTTTAAGAAACG+TGG | 0.615082 | 8_1:+86262845 | Msa1222060:CDS |
CAAAATTGCTGCAAATACAA+AGG | 0.620193 | 8_1:-86262671 | None:intergenic |
GATAGGTGCCAATGCCAAAG+TGG | 0.627922 | 8_1:-86262263 | None:intergenic |
ATATATAGCAGAGAGCAAGA+TGG | 0.639335 | 8_1:+86263908 | Msa1222060:CDS |
CCTATACACAACAAAGACTG+TGG | 0.643809 | 8_1:-86262230 | None:intergenic |
CTATACACAACAAAGACTGT+GGG | 0.650549 | 8_1:-86262229 | None:intergenic |
GTCATGTTGGATGATCATGC+AGG | 0.660106 | 8_1:+86263046 | Msa1222060:CDS |
CAAACTATACCCAATAAGAG+AGG | 0.666012 | 8_1:-86262470 | None:intergenic |
GTTGAACATTACACAATACA+GGG | 0.675633 | 8_1:-86263482 | None:intergenic |
AGACAACAGCACAAAATGGG+TGG | 0.676754 | 8_1:+86262106 | Msa1222060:exon |
TGTCAGTGGAGCCTTAACCA+TGG | 0.706104 | 8_1:+86262893 | Msa1222060:CDS |
GCTGTGATGACAGTAGCTAG+AGG | 0.719243 | 8_1:-86263505 | None:intergenic |
TTGAACATTACACAATACAG+GGG | 0.751249 | 8_1:-86263481 | None:intergenic |
GGTTTGTATATTGTGCTATG+GGG | 0.751530 | 8_1:+86263771 | Msa1222060:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATTTTATTTTGTTGT+AGG | + | chr8_1:86262392-86262411 | Msa1222060:intron | 10.0% |
!! | ATTATTATTATTATTAGTTC+TGG | - | chr8_1:86263088-86263107 | None:intergenic | 10.0% |
!!! | TTTTTATTTTATTTTGTTGT+AGG | + | chr8_1:86262392-86262411 | Msa1222060:intron | 10.0% |
!! | ATTATTATTATTATTAGTTC+TGG | - | chr8_1:86263088-86263107 | None:intergenic | 10.0% |
!! | CATATATGATATATATGAAA+AGG | - | chr8_1:86262368-86262387 | None:intergenic | 15.0% |
!! | CATATATGATATATATGAAA+AGG | - | chr8_1:86262368-86262387 | None:intergenic | 15.0% |
!! | TTATTTGATGAAAAGATGAT+AGG | - | chr8_1:86262283-86262302 | None:intergenic | 20.0% |
!! | TATGATATATATGAAAAGGT+AGG | - | chr8_1:86262364-86262383 | None:intergenic | 20.0% |
!! | ACAATATTATTGTTCATCAA+TGG | + | chr8_1:86263119-86263138 | Msa1222060:intron | 20.0% |
!!! | ATCATATATTATCGACTTTT+TGG | + | chr8_1:86263192-86263211 | Msa1222060:CDS | 20.0% |
!!! | TTTAAGAGTATTTTTCATGA+CGG | - | chr8_1:86263615-86263634 | None:intergenic | 20.0% |
!! | TATTAATCATACAACTATAC+AGG | - | chr8_1:86263654-86263673 | None:intergenic | 20.0% |
!! | AATAACTGTATTATTGTGTA+TGG | + | chr8_1:86263689-86263708 | Msa1222060:intron | 20.0% |
!! | AATAAGTAATAGGATAGATT+TGG | + | chr8_1:86263857-86263876 | Msa1222060:CDS | 20.0% |
!!! | ATTCTTTTCATTAGATGTTT+TGG | - | chr8_1:86264051-86264070 | None:intergenic | 20.0% |
!!! | CACATTTTAGTGTAATTTTT+CGG | + | chr8_1:86264184-86264203 | Msa1222060:three_prime_UTR | 20.0% |
!! | TAAGAAATTGAGAGATATAT+AGG | + | chr8_1:86264262-86264281 | Msa1222060:three_prime_UTR | 20.0% |
!! | AAGAAATTGAGAGATATATA+GGG | + | chr8_1:86264263-86264282 | Msa1222060:three_prime_UTR | 20.0% |
!! | TTATTTGATGAAAAGATGAT+AGG | - | chr8_1:86262283-86262302 | None:intergenic | 20.0% |
!! | TATGATATATATGAAAAGGT+AGG | - | chr8_1:86262364-86262383 | None:intergenic | 20.0% |
!! | ACAATATTATTGTTCATCAA+TGG | + | chr8_1:86263119-86263138 | Msa1222060:intron | 20.0% |
!!! | ATCATATATTATCGACTTTT+TGG | + | chr8_1:86263192-86263211 | Msa1222060:CDS | 20.0% |
!!! | TTTAAGAGTATTTTTCATGA+CGG | - | chr8_1:86263615-86263634 | None:intergenic | 20.0% |
!! | TATTAATCATACAACTATAC+AGG | - | chr8_1:86263654-86263673 | None:intergenic | 20.0% |
!! | AATAACTGTATTATTGTGTA+TGG | + | chr8_1:86263689-86263708 | Msa1222060:intron | 20.0% |
!! | AATAAGTAATAGGATAGATT+TGG | + | chr8_1:86263857-86263876 | Msa1222060:CDS | 20.0% |
!!! | ATTCTTTTCATTAGATGTTT+TGG | - | chr8_1:86264051-86264070 | None:intergenic | 20.0% |
!!! | CACATTTTAGTGTAATTTTT+CGG | + | chr8_1:86264184-86264203 | Msa1222060:three_prime_UTR | 20.0% |
!! | TAAGAAATTGAGAGATATAT+AGG | + | chr8_1:86264262-86264281 | Msa1222060:three_prime_UTR | 20.0% |
!! | AAGAAATTGAGAGATATATA+GGG | + | chr8_1:86264263-86264282 | Msa1222060:three_prime_UTR | 20.0% |
!! | TCATCTTTTCATCAAATAAG+CGG | + | chr8_1:86262284-86262303 | Msa1222060:CDS | 25.0% |
!! | AACAAAAGCATAAGAATCAA+AGG | - | chr8_1:86262503-86262522 | None:intergenic | 25.0% |
! | TTATAATTGGTTATACATGC+AGG | + | chr8_1:86262557-86262576 | Msa1222060:intron | 25.0% |
! | TATAATTGGTTATACATGCA+GGG | + | chr8_1:86262558-86262577 | Msa1222060:intron | 25.0% |
!!! | AATCAGAATGCATATTTTAG+TGG | + | chr8_1:86262589-86262608 | Msa1222060:CDS | 25.0% |
! | TTTATTCTATGCTTCTTCTA+CGG | + | chr8_1:86262612-86262631 | Msa1222060:CDS | 25.0% |
!! | TTTGTATTTGCAGCAATTTT+GGG | + | chr8_1:86262673-86262692 | Msa1222060:CDS | 25.0% |
! | TTTGATTAAACTTTCAACAC+AGG | + | chr8_1:86263145-86263164 | Msa1222060:intron | 25.0% |
! | AAAGTCGATAATATATGATC+CGG | - | chr8_1:86263191-86263210 | None:intergenic | 25.0% |
! | AAACTGCATGAAATTTGTAA+AGG | - | chr8_1:86263299-86263318 | None:intergenic | 25.0% |
!! | ACAAATTGAAATGTTTCTGA+GGG | - | chr8_1:86263346-86263365 | None:intergenic | 25.0% |
!! | TACAAATTGAAATGTTTCTG+AGG | - | chr8_1:86263347-86263366 | None:intergenic | 25.0% |
!!! | TCTGTATTTTTTTGTGATAC+AGG | + | chr8_1:86263402-86263421 | Msa1222060:intron | 25.0% |
!!! | CTGTATTTTTTTGTGATACA+GGG | + | chr8_1:86263403-86263422 | Msa1222060:intron | 25.0% |
! | TACTCTTAAATCTAACTTTG+AGG | + | chr8_1:86263625-86263644 | Msa1222060:intron | 25.0% |
! | ACTCTTAAATCTAACTTTGA+GGG | + | chr8_1:86263626-86263645 | Msa1222060:intron | 25.0% |
! | AGGATGATGAAATAAGTAAT+AGG | + | chr8_1:86263847-86263866 | Msa1222060:CDS | 25.0% |
! | TATCATTAGTGTAGTCATTA+GGG | - | chr8_1:86263936-86263955 | None:intergenic | 25.0% |
! | CAATTTGAAGAAACAAAAAC+AGG | + | chr8_1:86263980-86263999 | Msa1222060:three_prime_UTR | 25.0% |
!! | AAGAATGCAAAATTTTGTCT+TGG | + | chr8_1:86264065-86264084 | Msa1222060:three_prime_UTR | 25.0% |
!! | AGAATGCAAAATTTTGTCTT+GGG | + | chr8_1:86264066-86264085 | Msa1222060:three_prime_UTR | 25.0% |
! | CCAGAAATTACATGAAAATA+TGG | - | chr8_1:86264235-86264254 | None:intergenic | 25.0% |
!! | CCATATTTTCATGTAATTTC+TGG | + | chr8_1:86264232-86264251 | Msa1222060:three_prime_UTR | 25.0% |
!! | TCATCTTTTCATCAAATAAG+CGG | + | chr8_1:86262284-86262303 | Msa1222060:CDS | 25.0% |
!! | AACAAAAGCATAAGAATCAA+AGG | - | chr8_1:86262503-86262522 | None:intergenic | 25.0% |
! | TTATAATTGGTTATACATGC+AGG | + | chr8_1:86262557-86262576 | Msa1222060:intron | 25.0% |
! | TATAATTGGTTATACATGCA+GGG | + | chr8_1:86262558-86262577 | Msa1222060:intron | 25.0% |
!!! | AATCAGAATGCATATTTTAG+TGG | + | chr8_1:86262589-86262608 | Msa1222060:CDS | 25.0% |
! | TTTATTCTATGCTTCTTCTA+CGG | + | chr8_1:86262612-86262631 | Msa1222060:CDS | 25.0% |
!! | TTTGTATTTGCAGCAATTTT+GGG | + | chr8_1:86262673-86262692 | Msa1222060:CDS | 25.0% |
! | TTTGATTAAACTTTCAACAC+AGG | + | chr8_1:86263145-86263164 | Msa1222060:intron | 25.0% |
! | AAAGTCGATAATATATGATC+CGG | - | chr8_1:86263191-86263210 | None:intergenic | 25.0% |
! | AAACTGCATGAAATTTGTAA+AGG | - | chr8_1:86263299-86263318 | None:intergenic | 25.0% |
!! | ACAAATTGAAATGTTTCTGA+GGG | - | chr8_1:86263346-86263365 | None:intergenic | 25.0% |
!! | TACAAATTGAAATGTTTCTG+AGG | - | chr8_1:86263347-86263366 | None:intergenic | 25.0% |
!!! | TCTGTATTTTTTTGTGATAC+AGG | + | chr8_1:86263402-86263421 | Msa1222060:intron | 25.0% |
!!! | CTGTATTTTTTTGTGATACA+GGG | + | chr8_1:86263403-86263422 | Msa1222060:intron | 25.0% |
! | TACTCTTAAATCTAACTTTG+AGG | + | chr8_1:86263625-86263644 | Msa1222060:intron | 25.0% |
! | ACTCTTAAATCTAACTTTGA+GGG | + | chr8_1:86263626-86263645 | Msa1222060:intron | 25.0% |
! | AGGATGATGAAATAAGTAAT+AGG | + | chr8_1:86263847-86263866 | Msa1222060:CDS | 25.0% |
! | TATCATTAGTGTAGTCATTA+GGG | - | chr8_1:86263936-86263955 | None:intergenic | 25.0% |
! | CAATTTGAAGAAACAAAAAC+AGG | + | chr8_1:86263980-86263999 | Msa1222060:three_prime_UTR | 25.0% |
!! | AAGAATGCAAAATTTTGTCT+TGG | + | chr8_1:86264065-86264084 | Msa1222060:three_prime_UTR | 25.0% |
!! | AGAATGCAAAATTTTGTCTT+GGG | + | chr8_1:86264066-86264085 | Msa1222060:three_prime_UTR | 25.0% |
! | CCAGAAATTACATGAAAATA+TGG | - | chr8_1:86264235-86264254 | None:intergenic | 25.0% |
!! | CCATATTTTCATGTAATTTC+TGG | + | chr8_1:86264232-86264251 | Msa1222060:three_prime_UTR | 25.0% |
AGATGGTTATCTTACAGTAA+TGG | + | chr8_1:86262132-86262151 | Msa1222060:CDS | 30.0% | |
CTTACAGTAATGGTTATGAT+AGG | + | chr8_1:86262142-86262161 | Msa1222060:CDS | 30.0% | |
TTCATCAAATAAGCGGTAAT+TGG | + | chr8_1:86262291-86262310 | Msa1222060:intron | 30.0% | |
AGTAATTGGTTAAGATCAGA+GGG | - | chr8_1:86262326-86262345 | None:intergenic | 30.0% | |
ACAAGAAGAATGAGAGTAAT+TGG | - | chr8_1:86262340-86262359 | None:intergenic | 30.0% | |
! | TTGTAGGAGACAATCTTTTA+AGG | + | chr8_1:86262408-86262427 | Msa1222060:intron | 30.0% |
!!! | CAATCTTTTAAGGCTTCATT+AGG | + | chr8_1:86262418-86262437 | Msa1222060:CDS | 30.0% |
ATGTTTATGACCTCTCTTAT+TGG | + | chr8_1:86262460-86262479 | Msa1222060:CDS | 30.0% | |
TGTTTATGACCTCTCTTATT+GGG | + | chr8_1:86262461-86262480 | Msa1222060:CDS | 30.0% | |
CAAAATTGCTGCAAATACAA+AGG | - | chr8_1:86262674-86262693 | None:intergenic | 30.0% | |
! | CTTTGTATTTGCAGCAATTT+TGG | + | chr8_1:86262672-86262691 | Msa1222060:CDS | 30.0% |
! | TTGTATTTGCAGCAATTTTG+GGG | + | chr8_1:86262674-86262693 | Msa1222060:CDS | 30.0% |
AAACAAATACTACTGCAACT+AGG | - | chr8_1:86262760-86262779 | None:intergenic | 30.0% | |
! | ATGCAATGAATGACATTTTC+TGG | + | chr8_1:86262792-86262811 | Msa1222060:intron | 30.0% |
! | AGGAAATAAGCTTTTACACA+TGG | + | chr8_1:86262926-86262945 | Msa1222060:CDS | 30.0% |
! | AAATAAGCTTTTACACATGG+AGG | + | chr8_1:86262929-86262948 | Msa1222060:CDS | 30.0% |
!!! | TCTTAGCAAGTAGTGTTTTT+TGG | + | chr8_1:86263024-86263043 | Msa1222060:CDS | 30.0% |
! | TATATTTGCACTGATCAAAG+AGG | + | chr8_1:86263244-86263263 | Msa1222060:CDS | 30.0% |
!!! | TTTTTTGTGATACAGGGAAT+TGG | + | chr8_1:86263409-86263428 | Msa1222060:intron | 30.0% |
TTGAACATTACACAATACAG+GGG | - | chr8_1:86263484-86263503 | None:intergenic | 30.0% | |
GTTGAACATTACACAATACA+GGG | - | chr8_1:86263485-86263504 | None:intergenic | 30.0% | |
CAATGTATAACTCTTCTTGT+AGG | - | chr8_1:86263549-86263568 | None:intergenic | 30.0% | |
CTACAAGAAGAGTTATACAT+TGG | + | chr8_1:86263547-86263566 | Msa1222060:CDS | 30.0% | |
AAGAAGAGTTATACATTGGA+AGG | + | chr8_1:86263551-86263570 | Msa1222060:CDS | 30.0% | |
! | TGGTTTGTATATTGTGCTAT+GGG | + | chr8_1:86263770-86263789 | Msa1222060:CDS | 30.0% |
TTTAGTCTCATCAAAGTCTT+TGG | - | chr8_1:86263802-86263821 | None:intergenic | 30.0% | |
TTCTGACTTATCTGTTAGAA+GGG | - | chr8_1:86263889-86263908 | None:intergenic | 30.0% | |
ATTCTGACTTATCTGTTAGA+AGG | - | chr8_1:86263890-86263909 | None:intergenic | 30.0% | |
CTATCATTAGTGTAGTCATT+AGG | - | chr8_1:86263937-86263956 | None:intergenic | 30.0% | |
! | GACTACACTAATGATAGTTT+TGG | + | chr8_1:86263940-86263959 | Msa1222060:three_prime_UTR | 30.0% |
CATTGCTTGGTTAGAAATTT+GGG | - | chr8_1:86264123-86264142 | None:intergenic | 30.0% | |
TTGTGTCTCTTATCACTTAA+GGG | - | chr8_1:86264304-86264323 | None:intergenic | 30.0% | |
AGATGGTTATCTTACAGTAA+TGG | + | chr8_1:86262132-86262151 | Msa1222060:CDS | 30.0% | |
CTTACAGTAATGGTTATGAT+AGG | + | chr8_1:86262142-86262161 | Msa1222060:CDS | 30.0% | |
TTCATCAAATAAGCGGTAAT+TGG | + | chr8_1:86262291-86262310 | Msa1222060:intron | 30.0% | |
AGTAATTGGTTAAGATCAGA+GGG | - | chr8_1:86262326-86262345 | None:intergenic | 30.0% | |
ACAAGAAGAATGAGAGTAAT+TGG | - | chr8_1:86262340-86262359 | None:intergenic | 30.0% | |
! | TTGTAGGAGACAATCTTTTA+AGG | + | chr8_1:86262408-86262427 | Msa1222060:intron | 30.0% |
!!! | CAATCTTTTAAGGCTTCATT+AGG | + | chr8_1:86262418-86262437 | Msa1222060:CDS | 30.0% |
ATGTTTATGACCTCTCTTAT+TGG | + | chr8_1:86262460-86262479 | Msa1222060:CDS | 30.0% | |
TGTTTATGACCTCTCTTATT+GGG | + | chr8_1:86262461-86262480 | Msa1222060:CDS | 30.0% | |
CAAAATTGCTGCAAATACAA+AGG | - | chr8_1:86262674-86262693 | None:intergenic | 30.0% | |
! | CTTTGTATTTGCAGCAATTT+TGG | + | chr8_1:86262672-86262691 | Msa1222060:CDS | 30.0% |
! | TTGTATTTGCAGCAATTTTG+GGG | + | chr8_1:86262674-86262693 | Msa1222060:CDS | 30.0% |
AAACAAATACTACTGCAACT+AGG | - | chr8_1:86262760-86262779 | None:intergenic | 30.0% | |
! | ATGCAATGAATGACATTTTC+TGG | + | chr8_1:86262792-86262811 | Msa1222060:intron | 30.0% |
! | AGGAAATAAGCTTTTACACA+TGG | + | chr8_1:86262926-86262945 | Msa1222060:CDS | 30.0% |
! | AAATAAGCTTTTACACATGG+AGG | + | chr8_1:86262929-86262948 | Msa1222060:CDS | 30.0% |
!!! | TCTTAGCAAGTAGTGTTTTT+TGG | + | chr8_1:86263024-86263043 | Msa1222060:CDS | 30.0% |
! | TATATTTGCACTGATCAAAG+AGG | + | chr8_1:86263244-86263263 | Msa1222060:CDS | 30.0% |
!!! | TTTTTTGTGATACAGGGAAT+TGG | + | chr8_1:86263409-86263428 | Msa1222060:intron | 30.0% |
TTGAACATTACACAATACAG+GGG | - | chr8_1:86263484-86263503 | None:intergenic | 30.0% | |
GTTGAACATTACACAATACA+GGG | - | chr8_1:86263485-86263504 | None:intergenic | 30.0% | |
CAATGTATAACTCTTCTTGT+AGG | - | chr8_1:86263549-86263568 | None:intergenic | 30.0% | |
CTACAAGAAGAGTTATACAT+TGG | + | chr8_1:86263547-86263566 | Msa1222060:CDS | 30.0% | |
AAGAAGAGTTATACATTGGA+AGG | + | chr8_1:86263551-86263570 | Msa1222060:CDS | 30.0% | |
! | TGGTTTGTATATTGTGCTAT+GGG | + | chr8_1:86263770-86263789 | Msa1222060:CDS | 30.0% |
TTTAGTCTCATCAAAGTCTT+TGG | - | chr8_1:86263802-86263821 | None:intergenic | 30.0% | |
TTCTGACTTATCTGTTAGAA+GGG | - | chr8_1:86263889-86263908 | None:intergenic | 30.0% | |
ATTCTGACTTATCTGTTAGA+AGG | - | chr8_1:86263890-86263909 | None:intergenic | 30.0% | |
CTATCATTAGTGTAGTCATT+AGG | - | chr8_1:86263937-86263956 | None:intergenic | 30.0% | |
! | GACTACACTAATGATAGTTT+TGG | + | chr8_1:86263940-86263959 | Msa1222060:three_prime_UTR | 30.0% |
CATTGCTTGGTTAGAAATTT+GGG | - | chr8_1:86264123-86264142 | None:intergenic | 30.0% | |
TTGTGTCTCTTATCACTTAA+GGG | - | chr8_1:86264304-86264323 | None:intergenic | 30.0% | |
GCTTCACACTAAGTTAATTG+AGG | - | chr8_1:86262081-86262100 | None:intergenic | 35.0% | |
ATCTAGACAACAGCACAAAA+TGG | + | chr8_1:86262102-86262121 | Msa1222060:exon | 35.0% | |
TCTAGACAACAGCACAAAAT+GGG | + | chr8_1:86262103-86262122 | Msa1222060:exon | 35.0% | |
CTATACACAACAAAGACTGT+GGG | - | chr8_1:86262232-86262251 | None:intergenic | 35.0% | |
GAGTAATTGGTTAAGATCAG+AGG | - | chr8_1:86262327-86262346 | None:intergenic | 35.0% | |
CAAACTATACCCAATAAGAG+AGG | - | chr8_1:86262473-86262492 | None:intergenic | 35.0% | |
TATCAAATTACTCATGGCAG+TGG | - | chr8_1:86262641-86262660 | None:intergenic | 35.0% | |
TGCAGGTATCAAATTACTCA+TGG | - | chr8_1:86262647-86262666 | None:intergenic | 35.0% | |
GCAAATACAAAGGTTAATGC+AGG | - | chr8_1:86262664-86262683 | None:intergenic | 35.0% | |
TCTTCGAAGTTTAAGAAACG+TGG | + | chr8_1:86262845-86262864 | Msa1222060:CDS | 35.0% | |
AGAAACGTGGCAAAGATATT+AGG | + | chr8_1:86262858-86262877 | Msa1222060:CDS | 35.0% | |
GAAACGTGGCAAAGATATTA+GGG | + | chr8_1:86262859-86262878 | Msa1222060:CDS | 35.0% | |
TTTGAGAAATGCCATGGTTA+AGG | - | chr8_1:86262907-86262926 | None:intergenic | 35.0% | |
TTAACCATGGCATTTCTCAA+AGG | + | chr8_1:86262906-86262925 | Msa1222060:CDS | 35.0% | |
! | ATTTCCTTTGAGAAATGCCA+TGG | - | chr8_1:86262913-86262932 | None:intergenic | 35.0% |
!!! | GTAGTGTTTTTTGGTCATGT+TGG | + | chr8_1:86263033-86263052 | Msa1222060:CDS | 35.0% |
AAGAGGAGAATCTTCAAGTA+TGG | + | chr8_1:86263261-86263280 | Msa1222060:CDS | 35.0% | |
ATATGCAGTAAGTCTCTAAC+AGG | + | chr8_1:86263319-86263338 | Msa1222060:intron | 35.0% | |
GGTTGAACATTACACAATAC+AGG | - | chr8_1:86263486-86263505 | None:intergenic | 35.0% | |
ATGCATCATCCATTTCAGTT+TGG | + | chr8_1:86263725-86263744 | Msa1222060:intron | 35.0% | |
ATCATCCATTTCAGTTTGGT+AGG | + | chr8_1:86263729-86263748 | Msa1222060:intron | 35.0% | |
TCATCCATTTCAGTTTGGTA+GGG | + | chr8_1:86263730-86263749 | Msa1222060:intron | 35.0% | |
! | GTGGTTTGTATATTGTGCTA+TGG | + | chr8_1:86263769-86263788 | Msa1222060:CDS | 35.0% |
GGTTTGTATATTGTGCTATG+GGG | + | chr8_1:86263771-86263790 | Msa1222060:CDS | 35.0% | |
TCTGACTTATCTGTTAGAAG+GGG | - | chr8_1:86263888-86263907 | None:intergenic | 35.0% | |
ATATATAGCAGAGAGCAAGA+TGG | + | chr8_1:86263908-86263927 | Msa1222060:CDS | 35.0% | |
GCATTGCTTGGTTAGAAATT+TGG | - | chr8_1:86264124-86264143 | None:intergenic | 35.0% | |
! | ACTAATTTTACTTGCACGAG+CGG | - | chr8_1:86264153-86264172 | None:intergenic | 35.0% |
GTTGTGTCTCTTATCACTTA+AGG | - | chr8_1:86264305-86264324 | None:intergenic | 35.0% | |
GCTTCACACTAAGTTAATTG+AGG | - | chr8_1:86262081-86262100 | None:intergenic | 35.0% | |
ATCTAGACAACAGCACAAAA+TGG | + | chr8_1:86262102-86262121 | Msa1222060:exon | 35.0% | |
TCTAGACAACAGCACAAAAT+GGG | + | chr8_1:86262103-86262122 | Msa1222060:exon | 35.0% | |
CTATACACAACAAAGACTGT+GGG | - | chr8_1:86262232-86262251 | None:intergenic | 35.0% | |
GAGTAATTGGTTAAGATCAG+AGG | - | chr8_1:86262327-86262346 | None:intergenic | 35.0% | |
CAAACTATACCCAATAAGAG+AGG | - | chr8_1:86262473-86262492 | None:intergenic | 35.0% | |
TATCAAATTACTCATGGCAG+TGG | - | chr8_1:86262641-86262660 | None:intergenic | 35.0% | |
TGCAGGTATCAAATTACTCA+TGG | - | chr8_1:86262647-86262666 | None:intergenic | 35.0% | |
GCAAATACAAAGGTTAATGC+AGG | - | chr8_1:86262664-86262683 | None:intergenic | 35.0% | |
TCTTCGAAGTTTAAGAAACG+TGG | + | chr8_1:86262845-86262864 | Msa1222060:CDS | 35.0% | |
AGAAACGTGGCAAAGATATT+AGG | + | chr8_1:86262858-86262877 | Msa1222060:CDS | 35.0% | |
GAAACGTGGCAAAGATATTA+GGG | + | chr8_1:86262859-86262878 | Msa1222060:CDS | 35.0% | |
TTTGAGAAATGCCATGGTTA+AGG | - | chr8_1:86262907-86262926 | None:intergenic | 35.0% | |
TTAACCATGGCATTTCTCAA+AGG | + | chr8_1:86262906-86262925 | Msa1222060:CDS | 35.0% | |
! | ATTTCCTTTGAGAAATGCCA+TGG | - | chr8_1:86262913-86262932 | None:intergenic | 35.0% |
!!! | GTAGTGTTTTTTGGTCATGT+TGG | + | chr8_1:86263033-86263052 | Msa1222060:CDS | 35.0% |
AAGAGGAGAATCTTCAAGTA+TGG | + | chr8_1:86263261-86263280 | Msa1222060:CDS | 35.0% | |
ATATGCAGTAAGTCTCTAAC+AGG | + | chr8_1:86263319-86263338 | Msa1222060:intron | 35.0% | |
GGTTGAACATTACACAATAC+AGG | - | chr8_1:86263486-86263505 | None:intergenic | 35.0% | |
ATGCATCATCCATTTCAGTT+TGG | + | chr8_1:86263725-86263744 | Msa1222060:intron | 35.0% | |
ATCATCCATTTCAGTTTGGT+AGG | + | chr8_1:86263729-86263748 | Msa1222060:intron | 35.0% | |
TCATCCATTTCAGTTTGGTA+GGG | + | chr8_1:86263730-86263749 | Msa1222060:intron | 35.0% | |
! | GTGGTTTGTATATTGTGCTA+TGG | + | chr8_1:86263769-86263788 | Msa1222060:CDS | 35.0% |
GGTTTGTATATTGTGCTATG+GGG | + | chr8_1:86263771-86263790 | Msa1222060:CDS | 35.0% | |
TCTGACTTATCTGTTAGAAG+GGG | - | chr8_1:86263888-86263907 | None:intergenic | 35.0% | |
ATATATAGCAGAGAGCAAGA+TGG | + | chr8_1:86263908-86263927 | Msa1222060:CDS | 35.0% | |
GCATTGCTTGGTTAGAAATT+TGG | - | chr8_1:86264124-86264143 | None:intergenic | 35.0% | |
! | ACTAATTTTACTTGCACGAG+CGG | - | chr8_1:86264153-86264172 | None:intergenic | 35.0% |
GTTGTGTCTCTTATCACTTA+AGG | - | chr8_1:86264305-86264324 | None:intergenic | 35.0% | |
CACAAAATGGGTGGTTTAGA+TGG | + | chr8_1:86262115-86262134 | Msa1222060:exon | 40.0% | |
TAGAGCAGCTCTTGTAAACA+TGG | - | chr8_1:86262194-86262213 | None:intergenic | 40.0% | |
ACAAGAGCTGCTCTATTAGA+TGG | + | chr8_1:86262199-86262218 | Msa1222060:CDS | 40.0% | |
CCTATACACAACAAAGACTG+TGG | - | chr8_1:86262233-86262252 | None:intergenic | 40.0% | |
! | CCACAGTCTTTGTTGTGTAT+AGG | + | chr8_1:86262230-86262249 | Msa1222060:CDS | 40.0% |
! | GTCTTTGTTGTGTATAGGCA+AGG | + | chr8_1:86262235-86262254 | Msa1222060:CDS | 40.0% |
TGGAGATGATACTTGGATTC+TGG | + | chr8_1:86262989-86263008 | Msa1222060:CDS | 40.0% | |
GGAGATGATACTTGGATTCT+GGG | + | chr8_1:86262990-86263009 | Msa1222060:CDS | 40.0% | |
CGATAATATATGATCCGGAC+AGG | - | chr8_1:86263186-86263205 | None:intergenic | 40.0% | |
CATCCATTTCAGTTTGGTAG+GGG | + | chr8_1:86263731-86263750 | Msa1222060:intron | 40.0% | |
TCATCCTGCATTTGTGATTG+TGG | - | chr8_1:86263834-86263853 | None:intergenic | 40.0% | |
CACAAAATGGGTGGTTTAGA+TGG | + | chr8_1:86262115-86262134 | Msa1222060:exon | 40.0% | |
TAGAGCAGCTCTTGTAAACA+TGG | - | chr8_1:86262194-86262213 | None:intergenic | 40.0% | |
ACAAGAGCTGCTCTATTAGA+TGG | + | chr8_1:86262199-86262218 | Msa1222060:CDS | 40.0% | |
CCTATACACAACAAAGACTG+TGG | - | chr8_1:86262233-86262252 | None:intergenic | 40.0% | |
! | CCACAGTCTTTGTTGTGTAT+AGG | + | chr8_1:86262230-86262249 | Msa1222060:CDS | 40.0% |
! | GTCTTTGTTGTGTATAGGCA+AGG | + | chr8_1:86262235-86262254 | Msa1222060:CDS | 40.0% |
TGGAGATGATACTTGGATTC+TGG | + | chr8_1:86262989-86263008 | Msa1222060:CDS | 40.0% | |
GGAGATGATACTTGGATTCT+GGG | + | chr8_1:86262990-86263009 | Msa1222060:CDS | 40.0% | |
CGATAATATATGATCCGGAC+AGG | - | chr8_1:86263186-86263205 | None:intergenic | 40.0% | |
CATCCATTTCAGTTTGGTAG+GGG | + | chr8_1:86263731-86263750 | Msa1222060:intron | 40.0% | |
TCATCCTGCATTTGTGATTG+TGG | - | chr8_1:86263834-86263853 | None:intergenic | 40.0% | |
AGACAACAGCACAAAATGGG+TGG | + | chr8_1:86262106-86262125 | Msa1222060:exon | 45.0% | |
GGGACAATATGTTGTGTCAG+TGG | + | chr8_1:86262879-86262898 | Msa1222060:CDS | 45.0% | |
! | GCAGTGAGATGTTTGGAATC+AGG | - | chr8_1:86262966-86262985 | None:intergenic | 45.0% |
TCCAAACATCTCACTGCAAG+TGG | + | chr8_1:86262969-86262988 | Msa1222060:CDS | 45.0% | |
TCCACTTGCAGTGAGATGTT+TGG | - | chr8_1:86262973-86262992 | None:intergenic | 45.0% | |
CTGCAAGTGGAGATGATACT+TGG | + | chr8_1:86262982-86263001 | Msa1222060:CDS | 45.0% | |
GTCATGTTGGATGATCATGC+AGG | + | chr8_1:86263046-86263065 | Msa1222060:CDS | 45.0% | |
TCCGGACAGGATGAAGAAAT+CGG | - | chr8_1:86263173-86263192 | None:intergenic | 45.0% | |
CTAGCTTCTTCATTCAGTCC+TGG | + | chr8_1:86263440-86263459 | Msa1222060:CDS | 45.0% | |
ATTCAGTCCTGGTGCATATC+AGG | + | chr8_1:86263451-86263470 | Msa1222060:CDS | 45.0% | |
CTGTGATGACAGTAGCTAGA+GGG | - | chr8_1:86263507-86263526 | None:intergenic | 45.0% | |
AGCTACTGTCATCACAGCTT+TGG | + | chr8_1:86263510-86263529 | Msa1222060:CDS | 45.0% | |
AAGCCCCTACCAAACTGAAA+TGG | - | chr8_1:86263737-86263756 | None:intergenic | 45.0% | |
! | TTCAGTTTGGTAGGGGCTTT+TGG | + | chr8_1:86263738-86263757 | Msa1222060:intron | 45.0% |
GCTACCACAATCACAAATGC+AGG | + | chr8_1:86263827-86263846 | Msa1222060:CDS | 45.0% | |
GAGCGGAATAATGCATTGCT+TGG | - | chr8_1:86264136-86264155 | None:intergenic | 45.0% | |
GATATATAGGGACGCCAAAG+TGG | + | chr8_1:86264275-86264294 | Msa1222060:three_prime_UTR | 45.0% | |
!! | TCACTTAAGGGTGTCCACTT+TGG | - | chr8_1:86264292-86264311 | None:intergenic | 45.0% |
AGACAACAGCACAAAATGGG+TGG | + | chr8_1:86262106-86262125 | Msa1222060:exon | 45.0% | |
GGGACAATATGTTGTGTCAG+TGG | + | chr8_1:86262879-86262898 | Msa1222060:CDS | 45.0% | |
! | GCAGTGAGATGTTTGGAATC+AGG | - | chr8_1:86262966-86262985 | None:intergenic | 45.0% |
TCCAAACATCTCACTGCAAG+TGG | + | chr8_1:86262969-86262988 | Msa1222060:CDS | 45.0% | |
TCCACTTGCAGTGAGATGTT+TGG | - | chr8_1:86262973-86262992 | None:intergenic | 45.0% | |
CTGCAAGTGGAGATGATACT+TGG | + | chr8_1:86262982-86263001 | Msa1222060:CDS | 45.0% | |
GTCATGTTGGATGATCATGC+AGG | + | chr8_1:86263046-86263065 | Msa1222060:CDS | 45.0% | |
TCCGGACAGGATGAAGAAAT+CGG | - | chr8_1:86263173-86263192 | None:intergenic | 45.0% | |
CTAGCTTCTTCATTCAGTCC+TGG | + | chr8_1:86263440-86263459 | Msa1222060:CDS | 45.0% | |
ATTCAGTCCTGGTGCATATC+AGG | + | chr8_1:86263451-86263470 | Msa1222060:CDS | 45.0% | |
CTGTGATGACAGTAGCTAGA+GGG | - | chr8_1:86263507-86263526 | None:intergenic | 45.0% | |
AGCTACTGTCATCACAGCTT+TGG | + | chr8_1:86263510-86263529 | Msa1222060:CDS | 45.0% | |
AAGCCCCTACCAAACTGAAA+TGG | - | chr8_1:86263737-86263756 | None:intergenic | 45.0% | |
! | TTCAGTTTGGTAGGGGCTTT+TGG | + | chr8_1:86263738-86263757 | Msa1222060:intron | 45.0% |
GCTACCACAATCACAAATGC+AGG | + | chr8_1:86263827-86263846 | Msa1222060:CDS | 45.0% | |
GAGCGGAATAATGCATTGCT+TGG | - | chr8_1:86264136-86264155 | None:intergenic | 45.0% | |
GATATATAGGGACGCCAAAG+TGG | + | chr8_1:86264275-86264294 | Msa1222060:three_prime_UTR | 45.0% | |
!! | TCACTTAAGGGTGTCCACTT+TGG | - | chr8_1:86264292-86264311 | None:intergenic | 45.0% |
!! | ACAAAATAAATAATTATAAT+TGG | + | chr8_1:86262544-86262563 | Msa1222060:intron | 5.0% |
!! | AATAATAATAATAATCTTAT+AGG | + | chr8_1:86263093-86263112 | Msa1222060:intron | 5.0% |
!! | ATAATAATAATAATCTTATA+GGG | + | chr8_1:86263094-86263113 | Msa1222060:intron | 5.0% |
!! | ACAAAATAAATAATTATAAT+TGG | + | chr8_1:86262544-86262563 | Msa1222060:intron | 5.0% |
!! | AATAATAATAATAATCTTAT+AGG | + | chr8_1:86263093-86263112 | Msa1222060:intron | 5.0% |
!! | ATAATAATAATAATCTTATA+GGG | + | chr8_1:86263094-86263113 | Msa1222060:intron | 5.0% |
TAGGCAAGGCATAGCCACTT+TGG | + | chr8_1:86262249-86262268 | Msa1222060:CDS | 50.0% | |
! | AGGCATAGCCACTTTGGCAT+TGG | + | chr8_1:86262255-86262274 | Msa1222060:CDS | 50.0% |
GATAGGTGCCAATGCCAAAG+TGG | - | chr8_1:86262266-86262285 | None:intergenic | 50.0% | |
TGTCAGTGGAGCCTTAACCA+TGG | + | chr8_1:86262893-86262912 | Msa1222060:CDS | 50.0% | |
! | GCCGATTTCTTCATCCTGTC+CGG | + | chr8_1:86263169-86263188 | Msa1222060:CDS | 50.0% |
TCCTGGTGCATATCAGGAAG+AGG | + | chr8_1:86263457-86263476 | Msa1222060:CDS | 50.0% | |
ACCTCTTCCTGATATGCACC+AGG | - | chr8_1:86263461-86263480 | None:intergenic | 50.0% | |
GCTGTGATGACAGTAGCTAG+AGG | - | chr8_1:86263508-86263527 | None:intergenic | 50.0% | |
GATGATGCATGTGAGCGAGT+AGG | - | chr8_1:86263715-86263734 | None:intergenic | 50.0% | |
!!! | GGGGCTTTTGGAGTGATAAG+TGG | + | chr8_1:86263750-86263769 | Msa1222060:CDS | 50.0% |
TAGGCAAGGCATAGCCACTT+TGG | + | chr8_1:86262249-86262268 | Msa1222060:CDS | 50.0% | |
! | AGGCATAGCCACTTTGGCAT+TGG | + | chr8_1:86262255-86262274 | Msa1222060:CDS | 50.0% |
GATAGGTGCCAATGCCAAAG+TGG | - | chr8_1:86262266-86262285 | None:intergenic | 50.0% | |
TGTCAGTGGAGCCTTAACCA+TGG | + | chr8_1:86262893-86262912 | Msa1222060:CDS | 50.0% | |
! | GCCGATTTCTTCATCCTGTC+CGG | + | chr8_1:86263169-86263188 | Msa1222060:CDS | 50.0% |
TCCTGGTGCATATCAGGAAG+AGG | + | chr8_1:86263457-86263476 | Msa1222060:CDS | 50.0% | |
ACCTCTTCCTGATATGCACC+AGG | - | chr8_1:86263461-86263480 | None:intergenic | 50.0% | |
GCTGTGATGACAGTAGCTAG+AGG | - | chr8_1:86263508-86263527 | None:intergenic | 50.0% | |
GATGATGCATGTGAGCGAGT+AGG | - | chr8_1:86263715-86263734 | None:intergenic | 50.0% | |
!!! | GGGGCTTTTGGAGTGATAAG+TGG | + | chr8_1:86263750-86263769 | Msa1222060:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 86262034 | 86264326 | 86262034 | ID=Msa1222060;Name=Msa1222060 |
chr8_1 | mRNA | 86262034 | 86264326 | 86262034 | ID=Msa1222060-mRNA-1;Parent=Msa1222060;Name=Msa1222060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=87|1|1|1|1|1|7|388|370 |
chr8_1 | exon | 86262034 | 86262305 | 86262034 | ID=Msa1222060-mRNA-1:exon:30966;Parent=Msa1222060-mRNA-1 |
chr8_1 | exon | 86262414 | 86262482 | 86262414 | ID=Msa1222060-mRNA-1:exon:30967;Parent=Msa1222060-mRNA-1 |
chr8_1 | exon | 86262579 | 86262695 | 86262579 | ID=Msa1222060-mRNA-1:exon:30968;Parent=Msa1222060-mRNA-1 |
chr8_1 | exon | 86262830 | 86263067 | 86262830 | ID=Msa1222060-mRNA-1:exon:30969;Parent=Msa1222060-mRNA-1 |
chr8_1 | exon | 86263167 | 86263325 | 86263167 | ID=Msa1222060-mRNA-1:exon:30970;Parent=Msa1222060-mRNA-1 |
chr8_1 | exon | 86263424 | 86263572 | 86263424 | ID=Msa1222060-mRNA-1:exon:30971;Parent=Msa1222060-mRNA-1 |
chr8_1 | exon | 86263743 | 86264326 | 86263743 | ID=Msa1222060-mRNA-1:exon:30972;Parent=Msa1222060-mRNA-1 |
chr8_1 | five_prime_UTR | 86262034 | 86262120 | 86262034 | ID=Msa1222060-mRNA-1:five_prime_utr;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86262121 | 86262305 | 86262121 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86262414 | 86262482 | 86262414 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86262579 | 86262695 | 86262579 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86262830 | 86263067 | 86262830 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86263167 | 86263325 | 86263167 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86263424 | 86263572 | 86263424 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | CDS | 86263743 | 86263938 | 86263743 | ID=Msa1222060-mRNA-1:cds;Parent=Msa1222060-mRNA-1 |
chr8_1 | three_prime_UTR | 86263939 | 86264326 | 86263939 | ID=Msa1222060-mRNA-1:three_prime_utr;Parent=Msa1222060-mRNA-1 |
Gene Sequence |
Protein sequence |