Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221480 | XP_013458553.1 | 96.757 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 0.0 | 732 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221480 | sp|Q9SUD5|WTR36_ARATH | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.25e-105 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036610 | Msa1221480 | 0.809616 | 1.733131e-50 | -8.615850e-47 |
| Msa0094940 | Msa1221480 | 0.821664 | 3.580841e-53 | -8.615850e-47 |
| Msa0714100 | Msa1221480 | 0.803057 | 4.180472e-49 | -8.615850e-47 |
| Msa0756510 | Msa1221480 | 0.860374 | 2.159547e-63 | -8.615850e-47 |
| Msa0835450 | Msa1221480 | 0.841869 | 3.658144e-58 | -8.615850e-47 |
| Msa0226620 | Msa1221480 | 0.820355 | 7.166147e-53 | -8.615850e-47 |
| Msa0260270 | Msa1221480 | 0.813207 | 2.877421e-51 | -8.615850e-47 |
| Msa0304270 | Msa1221480 | 0.823506 | 1.335569e-53 | -8.615850e-47 |
| Msa0304310 | Msa1221480 | 0.801550 | 8.540810e-49 | -8.615850e-47 |
| Msa1221480 | Msa1222060 | 0.978059 | 4.855668e-145 | -8.615850e-47 |
| Msa1221480 | Msa1264890 | 0.945723 | 1.789369e-104 | -8.615850e-47 |
| Msa1221480 | Msa1303200 | 0.991136 | 4.475576e-186 | -8.615850e-47 |
| Msa1221480 | Msa1388170 | 0.800481 | 1.412264e-48 | -8.615850e-47 |
| Msa0884620 | Msa1221480 | -0.834385 | 3.090220e-56 | -8.615850e-47 |
| Msa0901190 | Msa1221480 | -0.801983 | 6.959339e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221480 | MtrunA17_Chr4g0073241 | 96.757 | 370 | 11 | 1 | 1 | 370 | 1 | 369 | 0.0 | 732 |
| Msa1221480 | MtrunA17_Chr8g0334761 | 51.087 | 368 | 169 | 8 | 1 | 360 | 1 | 365 | 1.14e-122 | 358 |
| Msa1221480 | MtrunA17_Chr2g0310441 | 46.849 | 365 | 181 | 3 | 4 | 356 | 6 | 369 | 1.46e-109 | 325 |
| Msa1221480 | MtrunA17_Chr8g0334771 | 48.541 | 377 | 183 | 6 | 1 | 370 | 1 | 373 | 7.52e-109 | 323 |
| Msa1221480 | MtrunA17_Chr8g0334751 | 48.634 | 366 | 171 | 6 | 2 | 360 | 3 | 358 | 5.97e-106 | 315 |
| Msa1221480 | MtrunA17_Chr7g0271561 | 34.211 | 342 | 201 | 5 | 8 | 334 | 7 | 339 | 8.06e-65 | 211 |
| Msa1221480 | MtrunA17_Chr1g0182291 | 33.131 | 329 | 210 | 5 | 16 | 340 | 23 | 345 | 1.45e-62 | 204 |
| Msa1221480 | MtrunA17_Chr1g0164831 | 34.320 | 338 | 214 | 4 | 10 | 344 | 5 | 337 | 1.98e-62 | 203 |
| Msa1221480 | MtrunA17_Chr2g0284261 | 32.670 | 352 | 219 | 5 | 1 | 339 | 1 | 347 | 2.08e-62 | 204 |
| Msa1221480 | MtrunA17_Chr6g0463971 | 34.066 | 364 | 214 | 7 | 4 | 352 | 5 | 357 | 2.52e-61 | 201 |
| Msa1221480 | MtrunA17_Chr3g0142131 | 34.218 | 377 | 215 | 8 | 13 | 363 | 25 | 394 | 1.76e-60 | 199 |
| Msa1221480 | MtrunA17_Chr1g0155761 | 33.333 | 378 | 220 | 7 | 11 | 361 | 24 | 396 | 2.94e-60 | 199 |
| Msa1221480 | MtrunA17_Chr2g0278541 | 31.536 | 371 | 237 | 7 | 3 | 361 | 7 | 372 | 2.24e-59 | 197 |
| Msa1221480 | MtrunA17_Chr6g0483401 | 34.211 | 342 | 212 | 5 | 17 | 350 | 19 | 355 | 3.13e-59 | 195 |
| Msa1221480 | MtrunA17_Chr2g0290611 | 35.501 | 369 | 216 | 9 | 4 | 361 | 8 | 365 | 4.12e-59 | 195 |
| Msa1221480 | MtrunA17_Chr3g0081511 | 36.503 | 326 | 196 | 5 | 13 | 332 | 22 | 342 | 4.41e-59 | 196 |
| Msa1221480 | MtrunA17_Chr1g0186611 | 33.237 | 346 | 209 | 6 | 11 | 345 | 19 | 353 | 5.85e-59 | 194 |
| Msa1221480 | MtrunA17_Chr3g0081421 | 33.069 | 378 | 225 | 10 | 11 | 369 | 20 | 388 | 2.53e-58 | 194 |
| Msa1221480 | MtrunA17_Chr1g0160111 | 30.812 | 357 | 216 | 7 | 17 | 352 | 16 | 362 | 7.23e-58 | 192 |
| Msa1221480 | MtrunA17_Chr8g0354121 | 31.044 | 364 | 237 | 6 | 13 | 369 | 18 | 374 | 1.10e-57 | 192 |
| Msa1221480 | MtrunA17_Chr1g0186641 | 34.218 | 339 | 211 | 5 | 11 | 344 | 16 | 347 | 1.80e-57 | 190 |
| Msa1221480 | MtrunA17_Chr2g0278561 | 31.915 | 376 | 238 | 7 | 4 | 367 | 11 | 380 | 5.26e-57 | 191 |
| Msa1221480 | MtrunA17_Chr8g0334711 | 50.476 | 210 | 92 | 5 | 1 | 204 | 1 | 204 | 1.58e-56 | 184 |
| Msa1221480 | MtrunA17_Chr7g0255561 | 31.269 | 323 | 209 | 4 | 13 | 327 | 19 | 336 | 4.06e-56 | 188 |
| Msa1221480 | MtrunA17_Chr7g0255581 | 31.269 | 323 | 209 | 4 | 13 | 327 | 19 | 336 | 4.06e-56 | 188 |
| Msa1221480 | MtrunA17_Chr1g0186561 | 33.036 | 336 | 220 | 3 | 11 | 344 | 19 | 351 | 4.36e-56 | 187 |
| Msa1221480 | MtrunA17_Chr7g0263101 | 32.394 | 355 | 216 | 9 | 16 | 362 | 21 | 359 | 7.62e-56 | 187 |
| Msa1221480 | MtrunA17_Chr3g0129591 | 32.873 | 362 | 227 | 8 | 1 | 354 | 1 | 354 | 1.82e-55 | 186 |
| Msa1221480 | MtrunA17_Chr8g0383731 | 33.043 | 345 | 212 | 5 | 11 | 346 | 8 | 342 | 2.28e-55 | 185 |
| Msa1221480 | MtrunA17_Chr3g0129571 | 30.387 | 362 | 235 | 7 | 1 | 353 | 3 | 356 | 7.33e-55 | 184 |
| Msa1221480 | MtrunA17_Chr1g0186601 | 32.849 | 344 | 206 | 8 | 3 | 333 | 11 | 342 | 1.02e-54 | 183 |
| Msa1221480 | MtrunA17_Chr3g0129601 | 31.395 | 344 | 224 | 5 | 1 | 338 | 25 | 362 | 1.58e-54 | 183 |
| Msa1221480 | MtrunA17_Chr1g0171301 | 32.647 | 340 | 219 | 6 | 11 | 344 | 19 | 354 | 1.30e-53 | 181 |
| Msa1221480 | MtrunA17_Chr2g0278551 | 32.908 | 392 | 227 | 10 | 4 | 369 | 8 | 389 | 1.63e-53 | 181 |
| Msa1221480 | MtrunA17_Chr1g0184221 | 30.532 | 357 | 221 | 8 | 10 | 350 | 22 | 367 | 2.69e-53 | 180 |
| Msa1221480 | MtrunA17_Chr2g0332001 | 32.665 | 349 | 221 | 8 | 4 | 345 | 34 | 375 | 5.55e-53 | 180 |
| Msa1221480 | MtrunA17_Chr1g0186571 | 31.728 | 353 | 215 | 8 | 11 | 353 | 16 | 352 | 9.63e-52 | 176 |
| Msa1221480 | MtrunA17_Chr3g0126101 | 33.968 | 315 | 198 | 5 | 23 | 334 | 21 | 328 | 1.97e-51 | 174 |
| Msa1221480 | MtrunA17_Chr4g0059311 | 33.333 | 315 | 196 | 6 | 33 | 339 | 37 | 345 | 4.01e-50 | 171 |
| Msa1221480 | MtrunA17_Chr1g0160171 | 29.799 | 349 | 235 | 5 | 3 | 347 | 11 | 353 | 4.83e-50 | 172 |
| Msa1221480 | MtrunA17_Chr3g0114691 | 28.909 | 339 | 230 | 5 | 11 | 343 | 23 | 356 | 4.94e-50 | 172 |
| Msa1221480 | MtrunA17_Chr3g0114731 | 30.571 | 350 | 229 | 6 | 11 | 354 | 21 | 362 | 2.29e-49 | 171 |
| Msa1221480 | MtrunA17_Chr3g0114711 | 29.581 | 382 | 216 | 10 | 14 | 351 | 20 | 392 | 5.41e-49 | 169 |
| Msa1221480 | MtrunA17_Chr4g0050881 | 31.198 | 359 | 218 | 9 | 11 | 357 | 12 | 353 | 2.13e-48 | 167 |
| Msa1221480 | MtrunA17_Chr5g0413961 | 32.432 | 333 | 209 | 6 | 28 | 359 | 34 | 351 | 5.90e-48 | 166 |
| Msa1221480 | MtrunA17_Chr1g0160181 | 29.301 | 372 | 236 | 7 | 11 | 359 | 21 | 388 | 1.91e-45 | 160 |
| Msa1221480 | MtrunA17_Chr8g0334721 | 50.714 | 140 | 68 | 1 | 220 | 358 | 1 | 140 | 5.15e-45 | 152 |
| Msa1221480 | MtrunA17_Chr5g0407991 | 30.871 | 379 | 230 | 8 | 1 | 362 | 3 | 366 | 7.82e-45 | 158 |
| Msa1221480 | MtrunA17_Chr7g0227921 | 31.563 | 339 | 208 | 7 | 28 | 350 | 31 | 361 | 7.66e-44 | 155 |
| Msa1221480 | MtrunA17_Chr3g0129581 | 30.769 | 364 | 232 | 8 | 1 | 354 | 1 | 354 | 8.63e-44 | 155 |
| Msa1221480 | MtrunA17_Chr4g0051021 | 31.515 | 330 | 219 | 5 | 10 | 335 | 16 | 342 | 3.49e-43 | 154 |
| Msa1221480 | MtrunA17_Chr8g0334731 | 53.425 | 146 | 63 | 3 | 63 | 204 | 44 | 188 | 8.35e-42 | 145 |
| Msa1221480 | MtrunA17_Chr5g0413941 | 30.422 | 332 | 226 | 4 | 5 | 334 | 4 | 332 | 9.14e-42 | 149 |
| Msa1221480 | MtrunA17_Chr5g0413921 | 32.537 | 335 | 217 | 6 | 4 | 334 | 3 | 332 | 1.12e-41 | 149 |
| Msa1221480 | MtrunA17_Chr5g0407971 | 30.137 | 365 | 232 | 6 | 3 | 349 | 6 | 365 | 2.63e-41 | 149 |
| Msa1221480 | MtrunA17_Chr4g0050891 | 29.969 | 327 | 217 | 4 | 4 | 322 | 9 | 331 | 3.90e-41 | 148 |
| Msa1221480 | MtrunA17_Chr5g0441761 | 30.088 | 339 | 223 | 6 | 13 | 349 | 19 | 345 | 3.11e-40 | 145 |
| Msa1221480 | MtrunA17_Chr1g0150151 | 31.892 | 370 | 223 | 9 | 1 | 350 | 1 | 361 | 3.69e-40 | 145 |
| Msa1221480 | MtrunA17_Chr3g0114701 | 28.446 | 341 | 235 | 5 | 11 | 345 | 12 | 349 | 9.77e-40 | 145 |
| Msa1221480 | MtrunA17_Chr6g0451261 | 32.632 | 285 | 183 | 4 | 28 | 308 | 31 | 310 | 1.29e-39 | 149 |
| Msa1221480 | MtrunA17_Chr4g0050941 | 29.683 | 347 | 227 | 4 | 10 | 344 | 14 | 355 | 2.78e-39 | 144 |
| Msa1221480 | MtrunA17_Chr6g0451211 | 29.700 | 367 | 234 | 10 | 8 | 367 | 12 | 361 | 1.12e-38 | 141 |
| Msa1221480 | MtrunA17_Chr5g0408031 | 29.769 | 346 | 216 | 7 | 27 | 353 | 29 | 366 | 2.95e-38 | 140 |
| Msa1221480 | MtrunA17_Chr5g0413931 | 30.380 | 316 | 213 | 5 | 28 | 339 | 26 | 338 | 4.15e-38 | 139 |
| Msa1221480 | MtrunA17_Chr5g0413951 | 30.065 | 306 | 209 | 4 | 28 | 331 | 27 | 329 | 1.05e-37 | 139 |
| Msa1221480 | MtrunA17_Chr5g0408041 | 28.609 | 381 | 239 | 7 | 1 | 362 | 4 | 370 | 1.11e-37 | 139 |
| Msa1221480 | MtrunA17_Chr5g0428881 | 28.152 | 341 | 231 | 5 | 13 | 347 | 23 | 355 | 1.66e-37 | 139 |
| Msa1221480 | MtrunA17_Chr6g0451201 | 32.312 | 359 | 224 | 8 | 11 | 367 | 15 | 356 | 3.86e-37 | 137 |
| Msa1221480 | MtrunA17_Chr1g0211801 | 32.685 | 257 | 152 | 5 | 8 | 256 | 13 | 256 | 5.73e-37 | 134 |
| Msa1221480 | MtrunA17_Chr4g0050931 | 28.571 | 343 | 186 | 8 | 4 | 333 | 8 | 304 | 1.72e-36 | 134 |
| Msa1221480 | MtrunA17_Chr6g0451171 | 29.706 | 340 | 229 | 5 | 7 | 343 | 11 | 343 | 3.73e-36 | 135 |
| Msa1221480 | MtrunA17_Chr5g0408001 | 29.375 | 320 | 205 | 5 | 25 | 327 | 27 | 342 | 8.26e-36 | 134 |
| Msa1221480 | MtrunA17_Chr3g0084091 | 32.155 | 283 | 172 | 6 | 93 | 366 | 12 | 283 | 2.71e-35 | 131 |
| Msa1221480 | MtrunA17_Chr2g0278021 | 36.638 | 232 | 135 | 4 | 125 | 345 | 1 | 231 | 5.09e-35 | 129 |
| Msa1221480 | MtrunA17_Chr4g0051001 | 30.693 | 303 | 198 | 6 | 10 | 305 | 33 | 330 | 9.37e-34 | 127 |
| Msa1221480 | MtrunA17_Chr6g0451251 | 29.830 | 352 | 229 | 8 | 21 | 369 | 26 | 362 | 3.85e-33 | 127 |
| Msa1221480 | MtrunA17_Chr5g0429001 | 28.378 | 296 | 200 | 4 | 78 | 366 | 18 | 308 | 7.42e-33 | 125 |
| Msa1221480 | MtrunA17_Chr3g0126091 | 27.933 | 358 | 243 | 5 | 7 | 361 | 13 | 358 | 1.19e-32 | 125 |
| Msa1221480 | MtrunA17_Chr8g0369841 | 29.003 | 331 | 212 | 6 | 25 | 337 | 26 | 351 | 1.46e-31 | 122 |
| Msa1221480 | MtrunA17_Chr5g0404811 | 29.317 | 249 | 156 | 7 | 125 | 360 | 7 | 248 | 3.05e-30 | 116 |
| Msa1221480 | MtrunA17_Chr5g0399281 | 29.223 | 373 | 222 | 10 | 1 | 356 | 1 | 348 | 9.69e-30 | 117 |
| Msa1221480 | MtrunA17_Chr6g0451191 | 30.137 | 219 | 150 | 2 | 126 | 343 | 2 | 218 | 4.08e-27 | 107 |
| Msa1221480 | MtrunA17_Chr4g0056081 | 30.267 | 337 | 209 | 11 | 13 | 333 | 19 | 345 | 2.58e-26 | 107 |
| Msa1221480 | MtrunA17_Chr8g0334741 | 40.645 | 155 | 53 | 5 | 220 | 360 | 1 | 130 | 6.35e-24 | 95.9 |
| Msa1221480 | MtrunA17_Chr1g0177221 | 26.295 | 251 | 181 | 2 | 7 | 256 | 17 | 264 | 3.03e-23 | 97.8 |
| Msa1221480 | MtrunA17_Chr1g0172891 | 34.444 | 90 | 59 | 0 | 264 | 353 | 15 | 104 | 2.61e-15 | 71.6 |
| Msa1221480 | MtrunA17_Chr1g0177231 | 36.364 | 88 | 56 | 0 | 264 | 351 | 37 | 124 | 3.71e-15 | 71.6 |
| Msa1221480 | MtrunA17_Chr1g0211811 | 35.632 | 87 | 55 | 1 | 258 | 344 | 2 | 87 | 2.09e-13 | 65.5 |
| Msa1221480 | MtrunA17_Chr1g0182261 | 27.703 | 148 | 102 | 4 | 199 | 342 | 79 | 225 | 1.07e-11 | 64.3 |
| Msa1221480 | MtrunA17_Chr5g0404801 | 38.889 | 108 | 63 | 1 | 16 | 123 | 15 | 119 | 1.26e-11 | 61.6 |
| Msa1221480 | MtrunA17_Chr4g0050911 | 33.071 | 127 | 73 | 3 | 91 | 206 | 11 | 136 | 2.39e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221480 | AT4G30420.2 | 43.968 | 373 | 194 | 6 | 1 | 360 | 1 | 371 | 1.05e-107 | 321 |
| Msa1221480 | AT4G28040.1 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
| Msa1221480 | AT4G28040.5 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
| Msa1221480 | AT4G28040.3 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
| Msa1221480 | AT4G28040.4 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
| Msa1221480 | AT4G28040.2 | 43.750 | 368 | 192 | 5 | 4 | 370 | 3 | 356 | 5.34e-106 | 316 |
| Msa1221480 | AT4G30420.1 | 43.956 | 364 | 189 | 6 | 11 | 361 | 1 | 362 | 8.56e-105 | 313 |
| Msa1221480 | AT1G75500.1 | 36.280 | 328 | 193 | 5 | 11 | 327 | 22 | 344 | 3.76e-62 | 204 |
| Msa1221480 | AT1G75500.2 | 36.280 | 328 | 193 | 5 | 11 | 327 | 22 | 344 | 3.76e-62 | 204 |
| Msa1221480 | AT1G09380.1 | 35.913 | 323 | 198 | 3 | 8 | 324 | 7 | 326 | 1.07e-61 | 202 |
| Msa1221480 | AT3G18200.2 | 34.722 | 360 | 212 | 8 | 10 | 361 | 36 | 380 | 2.02e-58 | 194 |
| Msa1221480 | AT2G37460.1 | 31.680 | 363 | 224 | 9 | 13 | 361 | 19 | 371 | 3.46e-56 | 188 |
| Msa1221480 | AT3G30340.1 | 35.135 | 333 | 196 | 7 | 11 | 334 | 17 | 338 | 5.43e-55 | 185 |
| Msa1221480 | AT4G01440.1 | 33.333 | 342 | 217 | 6 | 1 | 336 | 1 | 337 | 1.81e-54 | 183 |
| Msa1221480 | AT5G64700.1 | 31.356 | 354 | 228 | 4 | 7 | 351 | 9 | 356 | 2.48e-53 | 180 |
| Msa1221480 | AT5G07050.1 | 31.921 | 354 | 214 | 7 | 13 | 347 | 22 | 367 | 1.57e-52 | 179 |
| Msa1221480 | AT5G13670.1 | 28.809 | 361 | 235 | 6 | 16 | 366 | 15 | 363 | 2.29e-52 | 178 |
| Msa1221480 | AT1G21890.1 | 29.891 | 368 | 228 | 6 | 1 | 355 | 6 | 356 | 3.02e-52 | 178 |
| Msa1221480 | AT2G39510.1 | 31.778 | 343 | 215 | 8 | 11 | 341 | 10 | 345 | 1.37e-51 | 176 |
| Msa1221480 | AT1G43650.1 | 32.551 | 341 | 220 | 5 | 11 | 349 | 9 | 341 | 3.15e-51 | 174 |
| Msa1221480 | AT4G08300.1 | 30.056 | 356 | 229 | 7 | 2 | 347 | 4 | 349 | 4.66e-50 | 172 |
| Msa1221480 | AT5G40240.1 | 36.039 | 308 | 183 | 7 | 28 | 327 | 39 | 340 | 5.09e-49 | 169 |
| Msa1221480 | AT5G40240.3 | 36.039 | 308 | 183 | 7 | 28 | 327 | 39 | 340 | 5.09e-49 | 169 |
| Msa1221480 | AT3G53210.1 | 32.000 | 350 | 222 | 6 | 11 | 353 | 12 | 352 | 8.29e-49 | 169 |
| Msa1221480 | AT2G40900.1 | 30.488 | 328 | 212 | 6 | 13 | 334 | 15 | 332 | 9.46e-49 | 169 |
| Msa1221480 | AT5G40240.2 | 36.039 | 308 | 183 | 7 | 28 | 327 | 53 | 354 | 1.16e-48 | 169 |
| Msa1221480 | AT5G40230.1 | 34.925 | 335 | 189 | 8 | 28 | 343 | 40 | 364 | 3.10e-48 | 167 |
| Msa1221480 | AT4G01430.1 | 32.653 | 343 | 211 | 10 | 28 | 355 | 28 | 365 | 3.51e-48 | 167 |
| Msa1221480 | AT1G11460.1 | 33.025 | 324 | 209 | 5 | 10 | 329 | 17 | 336 | 2.23e-47 | 164 |
| Msa1221480 | AT4G01440.3 | 31.949 | 313 | 203 | 5 | 1 | 308 | 1 | 308 | 8.50e-47 | 162 |
| Msa1221480 | AT1G44800.1 | 29.014 | 355 | 239 | 5 | 2 | 350 | 4 | 351 | 8.71e-47 | 163 |
| Msa1221480 | AT1G11450.3 | 31.378 | 341 | 221 | 5 | 10 | 344 | 17 | 350 | 3.43e-46 | 161 |
| Msa1221480 | AT4G08290.1 | 30.000 | 360 | 236 | 8 | 11 | 361 | 15 | 367 | 5.29e-46 | 162 |
| Msa1221480 | AT1G11450.5 | 32.797 | 311 | 190 | 6 | 43 | 344 | 6 | 306 | 2.52e-45 | 158 |
| Msa1221480 | AT1G11450.2 | 34.926 | 272 | 167 | 4 | 79 | 344 | 32 | 299 | 7.47e-44 | 154 |
| Msa1221480 | AT1G01070.1 | 29.565 | 345 | 233 | 5 | 4 | 344 | 11 | 349 | 3.87e-43 | 154 |
| Msa1221480 | AT3G56620.1 | 28.754 | 313 | 216 | 4 | 13 | 324 | 15 | 321 | 1.30e-42 | 152 |
| Msa1221480 | AT1G68170.1 | 31.304 | 345 | 224 | 5 | 10 | 348 | 4 | 341 | 1.60e-42 | 152 |
| Msa1221480 | AT1G68170.2 | 31.304 | 345 | 224 | 5 | 10 | 348 | 14 | 351 | 1.90e-42 | 152 |
| Msa1221480 | AT2G37450.2 | 29.261 | 352 | 211 | 7 | 1 | 347 | 1 | 319 | 3.51e-42 | 150 |
| Msa1221480 | AT1G11450.1 | 35.249 | 261 | 159 | 4 | 90 | 344 | 2 | 258 | 5.69e-42 | 147 |
| Msa1221480 | AT1G21890.2 | 30.408 | 319 | 199 | 6 | 1 | 305 | 6 | 315 | 1.06e-40 | 147 |
| Msa1221480 | AT3G28050.1 | 29.971 | 347 | 225 | 7 | 28 | 369 | 31 | 364 | 1.14e-40 | 147 |
| Msa1221480 | AT3G53210.2 | 32.482 | 274 | 174 | 4 | 86 | 353 | 27 | 295 | 1.62e-40 | 145 |
| Msa1221480 | AT4G01440.5 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.83e-40 | 143 |
| Msa1221480 | AT4G01440.2 | 34.632 | 231 | 144 | 4 | 111 | 336 | 1 | 229 | 2.83e-40 | 143 |
| Msa1221480 | AT1G01070.2 | 32.593 | 270 | 175 | 4 | 79 | 344 | 36 | 302 | 8.31e-40 | 144 |
| Msa1221480 | AT3G18200.1 | 34.733 | 262 | 151 | 7 | 108 | 361 | 1 | 250 | 4.47e-39 | 140 |
| Msa1221480 | AT4G15540.1 | 34.251 | 327 | 189 | 7 | 28 | 343 | 36 | 347 | 1.34e-38 | 141 |
| Msa1221480 | AT4G15540.2 | 34.251 | 327 | 189 | 7 | 28 | 343 | 36 | 347 | 1.34e-38 | 141 |
| Msa1221480 | AT4G01450.2 | 31.871 | 342 | 222 | 6 | 1 | 338 | 1 | 335 | 1.05e-37 | 139 |
| Msa1221480 | AT5G40210.1 | 30.887 | 327 | 200 | 6 | 5 | 327 | 10 | 314 | 2.11e-37 | 138 |
| Msa1221480 | AT4G01440.4 | 33.077 | 260 | 165 | 4 | 1 | 256 | 1 | 255 | 2.68e-37 | 135 |
| Msa1221480 | AT4G01430.2 | 32.753 | 287 | 180 | 8 | 27 | 305 | 27 | 308 | 5.72e-37 | 136 |
| Msa1221480 | AT3G28070.2 | 31.907 | 257 | 166 | 4 | 94 | 345 | 7 | 259 | 1.63e-36 | 134 |
| Msa1221480 | AT1G25270.1 | 27.011 | 348 | 243 | 6 | 9 | 351 | 3 | 344 | 2.05e-36 | 135 |
| Msa1221480 | AT3G28130.5 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.38e-36 | 133 |
| Msa1221480 | AT3G28130.1 | 30.682 | 264 | 172 | 4 | 94 | 349 | 9 | 269 | 2.38e-36 | 133 |
| Msa1221480 | AT3G28070.1 | 31.907 | 257 | 166 | 4 | 94 | 345 | 99 | 351 | 1.01e-35 | 134 |
| Msa1221480 | AT3G28130.2 | 30.682 | 264 | 172 | 4 | 94 | 349 | 95 | 355 | 1.38e-35 | 133 |
| Msa1221480 | AT3G45870.1 | 30.793 | 328 | 204 | 7 | 11 | 322 | 14 | 334 | 2.91e-35 | 133 |
| Msa1221480 | AT1G11450.4 | 30.795 | 302 | 196 | 5 | 10 | 305 | 17 | 311 | 8.76e-35 | 130 |
| Msa1221480 | AT3G28100.1 | 33.198 | 247 | 156 | 4 | 94 | 335 | 96 | 338 | 2.21e-34 | 130 |
| Msa1221480 | AT4G01450.1 | 30.844 | 308 | 203 | 5 | 1 | 305 | 1 | 301 | 3.01e-34 | 129 |
| Msa1221480 | AT2G37450.3 | 31.102 | 254 | 161 | 5 | 99 | 347 | 3 | 247 | 4.34e-34 | 127 |
| Msa1221480 | AT5G45370.1 | 27.327 | 333 | 219 | 6 | 27 | 356 | 38 | 350 | 1.13e-33 | 128 |
| Msa1221480 | AT3G28080.5 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
| Msa1221480 | AT3G28080.7 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
| Msa1221480 | AT3G28080.8 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
| Msa1221480 | AT3G28080.6 | 31.020 | 245 | 160 | 4 | 96 | 335 | 9 | 249 | 2.83e-33 | 125 |
| Msa1221480 | AT5G47470.1 | 28.852 | 357 | 224 | 8 | 11 | 357 | 28 | 364 | 3.04e-33 | 127 |
| Msa1221480 | AT5G47470.2 | 28.852 | 357 | 224 | 8 | 11 | 357 | 56 | 392 | 4.39e-33 | 127 |
| Msa1221480 | AT5G47470.3 | 29.819 | 332 | 214 | 7 | 11 | 332 | 56 | 378 | 1.11e-32 | 126 |
| Msa1221480 | AT3G28080.1 | 29.795 | 292 | 177 | 7 | 57 | 335 | 62 | 338 | 1.45e-32 | 125 |
| Msa1221480 | AT3G28080.2 | 31.020 | 245 | 160 | 4 | 96 | 335 | 90 | 330 | 1.50e-32 | 125 |
| Msa1221480 | AT4G01430.3 | 33.043 | 230 | 138 | 7 | 140 | 355 | 1 | 228 | 2.21e-32 | 121 |
| Msa1221480 | AT3G30340.2 | 32.143 | 252 | 154 | 5 | 11 | 256 | 17 | 257 | 3.07e-32 | 122 |
| Msa1221480 | AT4G16620.1 | 30.321 | 343 | 198 | 9 | 34 | 356 | 37 | 358 | 1.10e-31 | 123 |
| Msa1221480 | AT4G01450.4 | 32.143 | 252 | 162 | 4 | 1 | 250 | 1 | 245 | 1.70e-31 | 120 |
| Msa1221480 | AT5G64700.2 | 29.183 | 257 | 168 | 3 | 7 | 255 | 9 | 259 | 3.93e-31 | 119 |
| Msa1221480 | AT5G45370.2 | 26.934 | 349 | 224 | 8 | 27 | 356 | 38 | 374 | 4.96e-31 | 121 |
| Msa1221480 | AT5G45370.4 | 26.934 | 349 | 224 | 8 | 27 | 356 | 38 | 374 | 4.96e-31 | 121 |
| Msa1221480 | AT3G53210.3 | 31.076 | 251 | 160 | 4 | 11 | 255 | 12 | 255 | 6.13e-31 | 119 |
| Msa1221480 | AT1G70260.1 | 26.149 | 348 | 247 | 5 | 23 | 361 | 26 | 372 | 2.01e-30 | 120 |
| Msa1221480 | AT1G60050.1 | 27.463 | 335 | 228 | 6 | 23 | 344 | 27 | 359 | 4.01e-30 | 119 |
| Msa1221480 | AT3G45870.8 | 29.904 | 311 | 195 | 7 | 11 | 305 | 14 | 317 | 2.81e-29 | 115 |
| Msa1221480 | AT4G19185.1 | 28.173 | 323 | 208 | 5 | 27 | 332 | 39 | 354 | 7.40e-29 | 116 |
| Msa1221480 | AT1G43650.2 | 32.203 | 236 | 153 | 3 | 11 | 245 | 9 | 238 | 3.72e-28 | 111 |
| Msa1221480 | AT3G28070.3 | 31.797 | 217 | 142 | 3 | 94 | 305 | 99 | 314 | 1.03e-27 | 111 |
| Msa1221480 | AT3G28130.3 | 28.879 | 232 | 154 | 4 | 126 | 349 | 2 | 230 | 6.58e-27 | 107 |
| Msa1221480 | AT3G28070.5 | 30.222 | 225 | 148 | 4 | 126 | 345 | 2 | 222 | 8.52e-27 | 107 |
| Msa1221480 | AT4G16620.4 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 1.86e-26 | 106 |
| Msa1221480 | AT4G16620.2 | 31.655 | 278 | 151 | 8 | 99 | 356 | 3 | 261 | 1.86e-26 | 106 |
| Msa1221480 | AT2G37450.1 | 29.825 | 228 | 146 | 5 | 125 | 347 | 62 | 280 | 3.06e-26 | 107 |
| Msa1221480 | AT4G19185.2 | 28.679 | 265 | 168 | 4 | 85 | 332 | 16 | 276 | 4.20e-26 | 107 |
| Msa1221480 | AT4G24980.1 | 28.155 | 309 | 141 | 9 | 23 | 324 | 1 | 235 | 1.94e-25 | 104 |
| Msa1221480 | AT4G01450.3 | 30.837 | 227 | 148 | 4 | 1 | 225 | 1 | 220 | 6.76e-24 | 99.4 |
| Msa1221480 | AT3G28080.9 | 29.302 | 215 | 143 | 4 | 126 | 335 | 2 | 212 | 1.18e-23 | 98.2 |
| Msa1221480 | AT5G45370.6 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 6.69e-23 | 97.4 |
| Msa1221480 | AT5G45370.5 | 26.429 | 280 | 178 | 7 | 96 | 356 | 2 | 272 | 6.69e-23 | 97.4 |
| Msa1221480 | AT4G08290.2 | 29.921 | 254 | 160 | 6 | 11 | 255 | 15 | 259 | 7.57e-23 | 97.4 |
| Msa1221480 | AT3G45870.9 | 30.120 | 249 | 153 | 5 | 11 | 244 | 14 | 256 | 8.32e-22 | 94.4 |
| Msa1221480 | AT3G28080.4 | 28.279 | 244 | 114 | 5 | 96 | 335 | 9 | 195 | 7.95e-21 | 90.1 |
| Msa1221480 | AT3G28080.3 | 27.491 | 291 | 131 | 8 | 57 | 335 | 62 | 284 | 4.11e-20 | 90.1 |
| Msa1221480 | AT3G45870.5 | 28.959 | 221 | 137 | 6 | 118 | 322 | 43 | 259 | 2.34e-18 | 85.1 |
| Msa1221480 | AT5G45370.3 | 24.800 | 250 | 160 | 7 | 126 | 356 | 74 | 314 | 1.06e-15 | 77.8 |
| Msa1221480 | AT4G16620.3 | 31.720 | 186 | 114 | 3 | 34 | 214 | 37 | 214 | 4.94e-14 | 72.0 |
| Msa1221480 | AT3G28100.3 | 32.484 | 157 | 100 | 3 | 94 | 245 | 96 | 251 | 7.31e-14 | 71.6 |
| Msa1221480 | AT3G28130.4 | 27.607 | 163 | 114 | 2 | 94 | 252 | 95 | 257 | 6.56e-13 | 68.6 |
| Msa1221480 | AT3G45870.6 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.13e-13 | 68.2 |
| Msa1221480 | AT3G45870.7 | 28.061 | 196 | 121 | 6 | 126 | 305 | 51 | 242 | 9.13e-13 | 68.2 |
| Msa1221480 | AT3G28100.2 | 32.692 | 156 | 97 | 3 | 94 | 245 | 96 | 247 | 4.95e-12 | 65.9 |
| Msa1221480 | AT3G45870.2 | 28.161 | 174 | 114 | 5 | 156 | 322 | 14 | 183 | 8.93e-12 | 64.7 |
Find 91 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTATTTGCAGCAATTT+TGG | 0.062039 | 8_1:-85073838 | Msa1221480:CDS |
| GCATTGCTTGGTTAGAAATT+TGG | 0.149475 | 8_1:+85072381 | None:intergenic |
| TTCAGTTTGGTAGGGGCTTT+TGG | 0.178567 | 8_1:-85072764 | Msa1221480:intron |
| AGAAACGTGGCAAAGATATT+AGG | 0.189542 | 8_1:-85073652 | Msa1221480:CDS |
| ATGTTTATGACCTCTCTTAT+TGG | 0.223884 | 8_1:-85074050 | Msa1221480:CDS |
| TGGAGATGATACTTGGATTC+TGG | 0.226586 | 8_1:-85073521 | Msa1221480:CDS |
| ATCTAGACAACAGCACAAAA+TGG | 0.278735 | 8_1:-85074413 | Msa1221480:exon |
| TTTAGTCTCATCAAAGTCTT+TGG | 0.286160 | 8_1:+85072703 | None:intergenic |
| AAATAAATTAAATGTGAAAT+AGG | 0.288457 | 8_1:+85074484 | None:intergenic |
| ATTCTGACTTATCTGTTAGA+AGG | 0.294692 | 8_1:+85072615 | None:intergenic |
| CCAGAAATTACATGAAAATA+TGG | 0.307414 | 8_1:+85072270 | None:intergenic |
| CTATCATTAGTGTAGTCATT+AGG | 0.312030 | 8_1:+85072568 | None:intergenic |
| ATTCAGTCCTGGTGCATATC+AGG | 0.317727 | 8_1:-85073051 | Msa1221480:CDS |
| TTGTGTCTCTTATCACTTAA+GGG | 0.322264 | 8_1:+85072201 | None:intergenic |
| TGTTTATGACCTCTCTTATT+GGG | 0.323265 | 8_1:-85074049 | Msa1221480:intron |
| GTTGTGTCTCTTATCACTTA+AGG | 0.324312 | 8_1:+85072200 | None:intergenic |
| CACAAAATGGGTGGTTTAGA+TGG | 0.327452 | 8_1:-85074400 | Msa1221480:exon |
| CATTGCTTGGTTAGAAATTT+GGG | 0.330134 | 8_1:+85072382 | None:intergenic |
| TAAGAAATTGAGAGATATAT+AGG | 0.332436 | 8_1:-85072240 | Msa1221480:three_prime_UTR |
| ACAAGAGCTGCTCTATTAGA+TGG | 0.337322 | 8_1:-85074316 | Msa1221480:CDS |
| AAGAGGAGAATCTTCAAGTA+TGG | 0.355050 | 8_1:-85073243 | Msa1221480:CDS |
| CAATGTATAACTCTTCTTGT+AGG | 0.355635 | 8_1:+85072956 | None:intergenic |
| GACTACACTAATGATAGTTT+TGG | 0.367052 | 8_1:-85072562 | Msa1221480:three_prime_UTR |
| CTTACAGTAATGGTTATGAT+AGG | 0.367931 | 8_1:-85074373 | Msa1221480:CDS |
| TATCATTAGTGTAGTCATTA+GGG | 0.369010 | 8_1:+85072569 | None:intergenic |
| AATAAGTAATAGGATAGATT+TGG | 0.374484 | 8_1:-85072645 | Msa1221480:CDS |
| TCCACTTGCAGTGAGATGTT+TGG | 0.383985 | 8_1:+85073540 | None:intergenic |
| GCAGTGAGATGTTTGGAATC+AGG | 0.387074 | 8_1:+85073547 | None:intergenic |
| GCCGATTTCTTCATCTTGTC+CGG | 0.387323 | 8_1:-85073335 | Msa1221480:CDS |
| TTTGAGAAATGCCATGGTTA+AGG | 0.391804 | 8_1:+85073606 | None:intergenic |
| AAGAAATTGAGAGATATATA+GGG | 0.396779 | 8_1:-85072239 | Msa1221480:three_prime_UTR |
| AGGATGATGAAATAAGTAAT+AGG | 0.399706 | 8_1:-85072655 | Msa1221480:CDS |
| CCACAGTCTTTGTTGTGTAT+AGG | 0.403014 | 8_1:-85074285 | Msa1221480:CDS |
| GAAACGTGGCAAAGATATTA+GGG | 0.403244 | 8_1:-85073651 | Msa1221480:CDS |
| CTGCAAGTGGAGATGATACT+TGG | 0.425884 | 8_1:-85073528 | Msa1221480:CDS |
| GGAGATGATACTTGGATTCT+GGG | 0.425968 | 8_1:-85073520 | Msa1221480:CDS |
| TTCTGACTTATCTGTTAGAA+GGG | 0.439173 | 8_1:+85072616 | None:intergenic |
| TTATTTGATGAAAAGATGAT+AGG | 0.443878 | 8_1:+85074235 | None:intergenic |
| AGCTACTGTCATCACAGCTT+TGG | 0.447218 | 8_1:-85072992 | Msa1221480:CDS |
| TCATCCATTTCAGTTTGGTA+GGG | 0.451556 | 8_1:-85072772 | Msa1221480:intron |
| CTAGCTTCTTCATTCAGTCC+TGG | 0.455175 | 8_1:-85073062 | Msa1221480:CDS |
| GGTTGAACATTACACAATAC+AGG | 0.477467 | 8_1:+85073019 | None:intergenic |
| AGGCATAGCCACTTTGGCAT+TGG | 0.478172 | 8_1:-85074260 | Msa1221480:CDS |
| CATCCATTTCAGTTTGGTAG+GGG | 0.480532 | 8_1:-85072771 | Msa1221480:intron |
| GAGCGGAATAATGCATTGCT+TGG | 0.485227 | 8_1:+85072369 | None:intergenic |
| GTGGTTTGTATATTGTGCTA+TGG | 0.486759 | 8_1:-85072733 | Msa1221480:CDS |
| AGATGGTTATCTTACAGTAA+TGG | 0.489887 | 8_1:-85074383 | Msa1221480:CDS |
| TGGTTTGTATATTGTGCTAT+GGG | 0.491355 | 8_1:-85072732 | Msa1221480:CDS |
| TCTAGACAACAGCACAAAAT+GGG | 0.499414 | 8_1:-85074412 | Msa1221480:exon |
| CAATTTGAAGAAACGAAAAC+AGG | 0.500337 | 8_1:-85072522 | Msa1221480:three_prime_UTR |
| AAAGTCGATAATATATGATC+CGG | 0.500385 | 8_1:+85073316 | None:intergenic |
| GCTTCACACTAAGTTAATTG+AGG | 0.503095 | 8_1:+85074437 | None:intergenic |
| TAGGCAAGGCATAGCCACTT+TGG | 0.512689 | 8_1:-85074266 | Msa1221480:CDS |
| TCATCCTGCATTTGTGATTG+TGG | 0.514775 | 8_1:+85072671 | None:intergenic |
| TCCGGACAAGATGAAGAAAT+CGG | 0.515636 | 8_1:+85073334 | None:intergenic |
| TTTATTCTATGCTTCTTCTA+CGG | 0.516850 | 8_1:-85073898 | Msa1221480:CDS |
| TCACTTAAGGGTGTCCACTT+TGG | 0.522779 | 8_1:+85072213 | None:intergenic |
| ATCATCCATTTCAGTTTGGT+AGG | 0.527344 | 8_1:-85072773 | Msa1221480:intron |
| GTCTTTGTTGTGTATAGGCA+AGG | 0.528821 | 8_1:-85074280 | Msa1221480:CDS |
| TCCAAACATCTCACTGCAAG+TGG | 0.528954 | 8_1:-85073541 | Msa1221480:CDS |
| GCTACCACAATCACAAATGC+AGG | 0.537389 | 8_1:-85072675 | Msa1221480:CDS |
| GCAAATACAAAGGTTAATGC+AGG | 0.537415 | 8_1:+85073849 | None:intergenic |
| CTACAAGAAGAGTTATACAT+TGG | 0.540322 | 8_1:-85072955 | Msa1221480:CDS |
| AAACTGCATGAAATTTGTAA+AGG | 0.542858 | 8_1:+85073208 | None:intergenic |
| AAGAAGAGTTATACATTGGA+AGG | 0.556408 | 8_1:-85072951 | Msa1221480:intron |
| ATTTCCTTTGAGAAATGCCA+TGG | 0.560886 | 8_1:+85073600 | None:intergenic |
| TGCAGGTATCAAATTACTCA+TGG | 0.563637 | 8_1:+85073866 | None:intergenic |
| TCCTGGTGCATATCAGGAAG+AGG | 0.567080 | 8_1:-85073045 | Msa1221480:CDS |
| GATATATAGGGACGCCAAAG+TGG | 0.575933 | 8_1:-85072227 | Msa1221480:three_prime_UTR |
| TTAACCATGGCATTTCTCAA+AGG | 0.576574 | 8_1:-85073604 | Msa1221480:CDS |
| ACCTCTTCCTGATATGCACC+AGG | 0.580892 | 8_1:+85073044 | None:intergenic |
| TAGAGCAGCTCTTGTAAACA+TGG | 0.582032 | 8_1:+85074324 | None:intergenic |
| TATATTTGCACTGATCAAAG+AGG | 0.589339 | 8_1:-85073260 | Msa1221480:CDS |
| TATCAAATTACTCATGGCAG+TGG | 0.593988 | 8_1:+85073872 | None:intergenic |
| GGGACAATATGTTGTGTCAG+TGG | 0.597289 | 8_1:-85073631 | Msa1221480:CDS |
| CTGTGATGACAGTAGCTAGA+GGG | 0.598316 | 8_1:+85072998 | None:intergenic |
| TCTGACTTATCTGTTAGAAG+GGG | 0.613530 | 8_1:+85072617 | None:intergenic |
| TCTTCGAAGTTTAAGAAACG+TGG | 0.615082 | 8_1:-85073665 | Msa1221480:CDS |
| CAAAATTGCTGCAAATACAA+AGG | 0.620193 | 8_1:+85073839 | None:intergenic |
| GATAGGTGCCAATGCCAAAG+TGG | 0.627922 | 8_1:+85074252 | None:intergenic |
| ATATATAGCAGAGAGCAAGA+TGG | 0.639335 | 8_1:-85072594 | Msa1221480:CDS |
| CCTATACACAACAAAGACTG+TGG | 0.643809 | 8_1:+85074285 | None:intergenic |
| CTATACACAACAAAGACTGT+GGG | 0.650549 | 8_1:+85074286 | None:intergenic |
| GTCATGTTGGATGATCATGC+AGG | 0.660106 | 8_1:-85073464 | Msa1221480:intron |
| CAAACTATACCCAATAAGAG+AGG | 0.666012 | 8_1:+85074040 | None:intergenic |
| GTTGAACATTACACAATACA+GGG | 0.675633 | 8_1:+85073020 | None:intergenic |
| AGACAACAGCACAAAATGGG+TGG | 0.676754 | 8_1:-85074409 | Msa1221480:exon |
| TGTCAGTGGAGCCTTAACCA+TGG | 0.706104 | 8_1:-85073617 | Msa1221480:CDS |
| GCTGTGATGACAGTAGCTAG+AGG | 0.719243 | 8_1:+85072997 | None:intergenic |
| TTGAACATTACACAATACAG+GGG | 0.751249 | 8_1:+85073021 | None:intergenic |
| GGTTTGTATATTGTGCTATG+GGG | 0.751530 | 8_1:-85072731 | Msa1221480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTATTTTGTTGT+AGG | - | chr8_1:85072561-85072580 | Msa1221480:three_prime_UTR | 10.0% |
| !! | ATTATTATTATTATTAGTTC+TGG | + | chr8_1:85073257-85073276 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTATTTTGTTGT+AGG | - | chr8_1:85072561-85072580 | Msa1221480:three_prime_UTR | 10.0% |
| !! | ATTATTATTATTATTAGTTC+TGG | + | chr8_1:85073257-85073276 | None:intergenic | 10.0% |
| !! | CATATATGATATATATGAAA+AGG | + | chr8_1:85072532-85072551 | None:intergenic | 15.0% |
| !! | CATATATGATATATATGAAA+AGG | + | chr8_1:85072532-85072551 | None:intergenic | 15.0% |
| !! | TTATTTGATGAAAAGATGAT+AGG | + | chr8_1:85072447-85072466 | None:intergenic | 20.0% |
| !! | TATGATATATATGAAAAGGT+AGG | + | chr8_1:85072528-85072547 | None:intergenic | 20.0% |
| !! | ACAATATTATTGTTCATCAA+TGG | - | chr8_1:85073294-85073313 | Msa1221480:CDS | 20.0% |
| !!! | ATCATATATTATCGACTTTT+TGG | - | chr8_1:85073367-85073386 | Msa1221480:intron | 20.0% |
| !!! | TTTAAGAGTATTTTTCATGA+CGG | + | chr8_1:85073792-85073811 | None:intergenic | 20.0% |
| !! | TATTAATCATACAACTATAC+AGG | + | chr8_1:85073831-85073850 | None:intergenic | 20.0% |
| !! | AATAACTGTATTATTGTGTA+TGG | - | chr8_1:85073866-85073885 | Msa1221480:CDS | 20.0% |
| !! | AATAAGTAATAGGATAGATT+TGG | - | chr8_1:85074034-85074053 | Msa1221480:intron | 20.0% |
| !!! | ATTCTTTTCATTAGATGTTT+TGG | + | chr8_1:85074228-85074247 | None:intergenic | 20.0% |
| !!! | CACATTTTAGTGTAATTTTT+CGG | - | chr8_1:85074361-85074380 | Msa1221480:CDS | 20.0% |
| !! | TAAGAAATTGAGAGATATAT+AGG | - | chr8_1:85074439-85074458 | Msa1221480:five_prime_UTR | 20.0% |
| !! | AAGAAATTGAGAGATATATA+GGG | - | chr8_1:85074440-85074459 | Msa1221480:five_prime_UTR | 20.0% |
| !! | TTATTTGATGAAAAGATGAT+AGG | + | chr8_1:85072447-85072466 | None:intergenic | 20.0% |
| !! | TATGATATATATGAAAAGGT+AGG | + | chr8_1:85072528-85072547 | None:intergenic | 20.0% |
| !! | ACAATATTATTGTTCATCAA+TGG | - | chr8_1:85073294-85073313 | Msa1221480:CDS | 20.0% |
| !!! | ATCATATATTATCGACTTTT+TGG | - | chr8_1:85073367-85073386 | Msa1221480:intron | 20.0% |
| !!! | TTTAAGAGTATTTTTCATGA+CGG | + | chr8_1:85073792-85073811 | None:intergenic | 20.0% |
| !! | TATTAATCATACAACTATAC+AGG | + | chr8_1:85073831-85073850 | None:intergenic | 20.0% |
| !! | AATAACTGTATTATTGTGTA+TGG | - | chr8_1:85073866-85073885 | Msa1221480:CDS | 20.0% |
| !! | AATAAGTAATAGGATAGATT+TGG | - | chr8_1:85074034-85074053 | Msa1221480:intron | 20.0% |
| !!! | ATTCTTTTCATTAGATGTTT+TGG | + | chr8_1:85074228-85074247 | None:intergenic | 20.0% |
| !!! | CACATTTTAGTGTAATTTTT+CGG | - | chr8_1:85074361-85074380 | Msa1221480:CDS | 20.0% |
| !! | TAAGAAATTGAGAGATATAT+AGG | - | chr8_1:85074439-85074458 | Msa1221480:five_prime_UTR | 20.0% |
| !! | AAGAAATTGAGAGATATATA+GGG | - | chr8_1:85074440-85074459 | Msa1221480:five_prime_UTR | 20.0% |
| !! | TCATCTTTTCATCAAATAAG+CGG | - | chr8_1:85072448-85072467 | Msa1221480:three_prime_UTR | 25.0% |
| !! | AACAAAAGCATAAGAATCAA+AGG | + | chr8_1:85072672-85072691 | None:intergenic | 25.0% |
| ! | TTATAATTGGTTATACATGC+AGG | - | chr8_1:85072726-85072745 | Msa1221480:CDS | 25.0% |
| ! | TATAATTGGTTATACATGCA+GGG | - | chr8_1:85072727-85072746 | Msa1221480:CDS | 25.0% |
| !!! | AATCAGAATGCATATTTTAG+TGG | - | chr8_1:85072758-85072777 | Msa1221480:CDS | 25.0% |
| ! | TTTATTCTATGCTTCTTCTA+CGG | - | chr8_1:85072781-85072800 | Msa1221480:intron | 25.0% |
| !! | TTTGTATTTGCAGCAATTTT+GGG | - | chr8_1:85072842-85072861 | Msa1221480:intron | 25.0% |
| ! | TTTGATTAAACTTTCAACAC+AGG | - | chr8_1:85073320-85073339 | Msa1221480:CDS | 25.0% |
| ! | AAAGTCGATAATATATGATC+CGG | + | chr8_1:85073366-85073385 | None:intergenic | 25.0% |
| ! | AAACTGCATGAAATTTGTAA+AGG | + | chr8_1:85073474-85073493 | None:intergenic | 25.0% |
| !! | ACAAATTGAAATGTTTCTGA+GGG | + | chr8_1:85073521-85073540 | None:intergenic | 25.0% |
| !! | TACAAATTGAAATGTTTCTG+AGG | + | chr8_1:85073522-85073541 | None:intergenic | 25.0% |
| !!! | TCTGTATTTTTTTGTGATAC+AGG | - | chr8_1:85073579-85073598 | Msa1221480:CDS | 25.0% |
| !!! | CTGTATTTTTTTGTGATACA+GGG | - | chr8_1:85073580-85073599 | Msa1221480:CDS | 25.0% |
| ! | TACTCTTAAATCTAACTTTG+AGG | - | chr8_1:85073802-85073821 | Msa1221480:intron | 25.0% |
| ! | ACTCTTAAATCTAACTTTGA+GGG | - | chr8_1:85073803-85073822 | Msa1221480:intron | 25.0% |
| ! | AGGATGATGAAATAAGTAAT+AGG | - | chr8_1:85074024-85074043 | Msa1221480:intron | 25.0% |
| ! | TATCATTAGTGTAGTCATTA+GGG | + | chr8_1:85074113-85074132 | None:intergenic | 25.0% |
| !! | AAGAATGCAAAATTTTGTCT+TGG | - | chr8_1:85074242-85074261 | Msa1221480:CDS | 25.0% |
| !! | AGAATGCAAAATTTTGTCTT+GGG | - | chr8_1:85074243-85074262 | Msa1221480:CDS | 25.0% |
| ! | CCAGAAATTACATGAAAATA+TGG | + | chr8_1:85074412-85074431 | None:intergenic | 25.0% |
| !! | CCATATTTTCATGTAATTTC+TGG | - | chr8_1:85074409-85074428 | Msa1221480:exon | 25.0% |
| !! | TCATCTTTTCATCAAATAAG+CGG | - | chr8_1:85072448-85072467 | Msa1221480:three_prime_UTR | 25.0% |
| !! | AACAAAAGCATAAGAATCAA+AGG | + | chr8_1:85072672-85072691 | None:intergenic | 25.0% |
| ! | TTATAATTGGTTATACATGC+AGG | - | chr8_1:85072726-85072745 | Msa1221480:CDS | 25.0% |
| ! | TATAATTGGTTATACATGCA+GGG | - | chr8_1:85072727-85072746 | Msa1221480:CDS | 25.0% |
| !!! | AATCAGAATGCATATTTTAG+TGG | - | chr8_1:85072758-85072777 | Msa1221480:CDS | 25.0% |
| ! | TTTATTCTATGCTTCTTCTA+CGG | - | chr8_1:85072781-85072800 | Msa1221480:intron | 25.0% |
| !! | TTTGTATTTGCAGCAATTTT+GGG | - | chr8_1:85072842-85072861 | Msa1221480:intron | 25.0% |
| ! | TTTGATTAAACTTTCAACAC+AGG | - | chr8_1:85073320-85073339 | Msa1221480:CDS | 25.0% |
| ! | AAAGTCGATAATATATGATC+CGG | + | chr8_1:85073366-85073385 | None:intergenic | 25.0% |
| ! | AAACTGCATGAAATTTGTAA+AGG | + | chr8_1:85073474-85073493 | None:intergenic | 25.0% |
| !! | ACAAATTGAAATGTTTCTGA+GGG | + | chr8_1:85073521-85073540 | None:intergenic | 25.0% |
| !! | TACAAATTGAAATGTTTCTG+AGG | + | chr8_1:85073522-85073541 | None:intergenic | 25.0% |
| !!! | TCTGTATTTTTTTGTGATAC+AGG | - | chr8_1:85073579-85073598 | Msa1221480:CDS | 25.0% |
| !!! | CTGTATTTTTTTGTGATACA+GGG | - | chr8_1:85073580-85073599 | Msa1221480:CDS | 25.0% |
| ! | TACTCTTAAATCTAACTTTG+AGG | - | chr8_1:85073802-85073821 | Msa1221480:intron | 25.0% |
| ! | ACTCTTAAATCTAACTTTGA+GGG | - | chr8_1:85073803-85073822 | Msa1221480:intron | 25.0% |
| ! | AGGATGATGAAATAAGTAAT+AGG | - | chr8_1:85074024-85074043 | Msa1221480:intron | 25.0% |
| ! | TATCATTAGTGTAGTCATTA+GGG | + | chr8_1:85074113-85074132 | None:intergenic | 25.0% |
| !! | AAGAATGCAAAATTTTGTCT+TGG | - | chr8_1:85074242-85074261 | Msa1221480:CDS | 25.0% |
| !! | AGAATGCAAAATTTTGTCTT+GGG | - | chr8_1:85074243-85074262 | Msa1221480:CDS | 25.0% |
| ! | CCAGAAATTACATGAAAATA+TGG | + | chr8_1:85074412-85074431 | None:intergenic | 25.0% |
| !! | CCATATTTTCATGTAATTTC+TGG | - | chr8_1:85074409-85074428 | Msa1221480:exon | 25.0% |
| AGATGGTTATCTTACAGTAA+TGG | - | chr8_1:85072296-85072315 | Msa1221480:three_prime_UTR | 30.0% | |
| CTTACAGTAATGGTTATGAT+AGG | - | chr8_1:85072306-85072325 | Msa1221480:three_prime_UTR | 30.0% | |
| TTCATCAAATAAGCGGTAAT+TGG | - | chr8_1:85072455-85072474 | Msa1221480:three_prime_UTR | 30.0% | |
| AGTAATTGGTTAAGATCAGA+GGG | + | chr8_1:85072490-85072509 | None:intergenic | 30.0% | |
| ACAAGAAGAATGAGAGTAAT+TGG | + | chr8_1:85072504-85072523 | None:intergenic | 30.0% | |
| ! | TTGTAGGAGACAATCTTTTA+AGG | - | chr8_1:85072577-85072596 | Msa1221480:exon | 30.0% |
| !!! | CAATCTTTTAAGGCTTCATT+AGG | - | chr8_1:85072587-85072606 | Msa1221480:CDS | 30.0% |
| ATGTTTATGACCTCTCTTAT+TGG | - | chr8_1:85072629-85072648 | Msa1221480:CDS | 30.0% | |
| TGTTTATGACCTCTCTTATT+GGG | - | chr8_1:85072630-85072649 | Msa1221480:CDS | 30.0% | |
| CAAAATTGCTGCAAATACAA+AGG | + | chr8_1:85072843-85072862 | None:intergenic | 30.0% | |
| ! | CTTTGTATTTGCAGCAATTT+TGG | - | chr8_1:85072841-85072860 | Msa1221480:intron | 30.0% |
| ! | TTGTATTTGCAGCAATTTTG+GGG | - | chr8_1:85072843-85072862 | Msa1221480:intron | 30.0% |
| AAACAAATACTACTGCAACT+AGG | + | chr8_1:85072929-85072948 | None:intergenic | 30.0% | |
| ! | ATGCAATGAATGACATTTTC+TGG | - | chr8_1:85072961-85072980 | Msa1221480:CDS | 30.0% |
| ! | AGGAAATAAGCTTTTACACA+TGG | - | chr8_1:85073095-85073114 | Msa1221480:intron | 30.0% |
| ! | AAATAAGCTTTTACACATGG+AGG | - | chr8_1:85073098-85073117 | Msa1221480:intron | 30.0% |
| !!! | TCTTAGCAAGTAGTGTTTTT+TGG | - | chr8_1:85073193-85073212 | Msa1221480:intron | 30.0% |
| ! | TATATTTGCACTGATCAAAG+AGG | - | chr8_1:85073419-85073438 | Msa1221480:intron | 30.0% |
| !!! | TTTTTTGTGATACAGGGAAT+TGG | - | chr8_1:85073586-85073605 | Msa1221480:CDS | 30.0% |
| TTGAACATTACACAATACAG+GGG | + | chr8_1:85073661-85073680 | None:intergenic | 30.0% | |
| GTTGAACATTACACAATACA+GGG | + | chr8_1:85073662-85073681 | None:intergenic | 30.0% | |
| CAATGTATAACTCTTCTTGT+AGG | + | chr8_1:85073726-85073745 | None:intergenic | 30.0% | |
| CTACAAGAAGAGTTATACAT+TGG | - | chr8_1:85073724-85073743 | Msa1221480:intron | 30.0% | |
| AAGAAGAGTTATACATTGGA+AGG | - | chr8_1:85073728-85073747 | Msa1221480:intron | 30.0% | |
| ! | TGGTTTGTATATTGTGCTAT+GGG | - | chr8_1:85073947-85073966 | Msa1221480:intron | 30.0% |
| TTTAGTCTCATCAAAGTCTT+TGG | + | chr8_1:85073979-85073998 | None:intergenic | 30.0% | |
| TTCTGACTTATCTGTTAGAA+GGG | + | chr8_1:85074066-85074085 | None:intergenic | 30.0% | |
| ATTCTGACTTATCTGTTAGA+AGG | + | chr8_1:85074067-85074086 | None:intergenic | 30.0% | |
| CTATCATTAGTGTAGTCATT+AGG | + | chr8_1:85074114-85074133 | None:intergenic | 30.0% | |
| ! | GACTACACTAATGATAGTTT+TGG | - | chr8_1:85074117-85074136 | Msa1221480:intron | 30.0% |
| CAATTTGAAGAAACGAAAAC+AGG | - | chr8_1:85074157-85074176 | Msa1221480:intron | 30.0% | |
| CATTGCTTGGTTAGAAATTT+GGG | + | chr8_1:85074300-85074319 | None:intergenic | 30.0% | |
| TTGTGTCTCTTATCACTTAA+GGG | + | chr8_1:85074481-85074500 | None:intergenic | 30.0% | |
| AGATGGTTATCTTACAGTAA+TGG | - | chr8_1:85072296-85072315 | Msa1221480:three_prime_UTR | 30.0% | |
| CTTACAGTAATGGTTATGAT+AGG | - | chr8_1:85072306-85072325 | Msa1221480:three_prime_UTR | 30.0% | |
| TTCATCAAATAAGCGGTAAT+TGG | - | chr8_1:85072455-85072474 | Msa1221480:three_prime_UTR | 30.0% | |
| AGTAATTGGTTAAGATCAGA+GGG | + | chr8_1:85072490-85072509 | None:intergenic | 30.0% | |
| ACAAGAAGAATGAGAGTAAT+TGG | + | chr8_1:85072504-85072523 | None:intergenic | 30.0% | |
| ! | TTGTAGGAGACAATCTTTTA+AGG | - | chr8_1:85072577-85072596 | Msa1221480:exon | 30.0% |
| !!! | CAATCTTTTAAGGCTTCATT+AGG | - | chr8_1:85072587-85072606 | Msa1221480:CDS | 30.0% |
| ATGTTTATGACCTCTCTTAT+TGG | - | chr8_1:85072629-85072648 | Msa1221480:CDS | 30.0% | |
| TGTTTATGACCTCTCTTATT+GGG | - | chr8_1:85072630-85072649 | Msa1221480:CDS | 30.0% | |
| CAAAATTGCTGCAAATACAA+AGG | + | chr8_1:85072843-85072862 | None:intergenic | 30.0% | |
| ! | CTTTGTATTTGCAGCAATTT+TGG | - | chr8_1:85072841-85072860 | Msa1221480:intron | 30.0% |
| ! | TTGTATTTGCAGCAATTTTG+GGG | - | chr8_1:85072843-85072862 | Msa1221480:intron | 30.0% |
| AAACAAATACTACTGCAACT+AGG | + | chr8_1:85072929-85072948 | None:intergenic | 30.0% | |
| ! | ATGCAATGAATGACATTTTC+TGG | - | chr8_1:85072961-85072980 | Msa1221480:CDS | 30.0% |
| ! | AGGAAATAAGCTTTTACACA+TGG | - | chr8_1:85073095-85073114 | Msa1221480:intron | 30.0% |
| ! | AAATAAGCTTTTACACATGG+AGG | - | chr8_1:85073098-85073117 | Msa1221480:intron | 30.0% |
| !!! | TCTTAGCAAGTAGTGTTTTT+TGG | - | chr8_1:85073193-85073212 | Msa1221480:intron | 30.0% |
| ! | TATATTTGCACTGATCAAAG+AGG | - | chr8_1:85073419-85073438 | Msa1221480:intron | 30.0% |
| !!! | TTTTTTGTGATACAGGGAAT+TGG | - | chr8_1:85073586-85073605 | Msa1221480:CDS | 30.0% |
| TTGAACATTACACAATACAG+GGG | + | chr8_1:85073661-85073680 | None:intergenic | 30.0% | |
| GTTGAACATTACACAATACA+GGG | + | chr8_1:85073662-85073681 | None:intergenic | 30.0% | |
| CAATGTATAACTCTTCTTGT+AGG | + | chr8_1:85073726-85073745 | None:intergenic | 30.0% | |
| CTACAAGAAGAGTTATACAT+TGG | - | chr8_1:85073724-85073743 | Msa1221480:intron | 30.0% | |
| AAGAAGAGTTATACATTGGA+AGG | - | chr8_1:85073728-85073747 | Msa1221480:intron | 30.0% | |
| ! | TGGTTTGTATATTGTGCTAT+GGG | - | chr8_1:85073947-85073966 | Msa1221480:intron | 30.0% |
| TTTAGTCTCATCAAAGTCTT+TGG | + | chr8_1:85073979-85073998 | None:intergenic | 30.0% | |
| TTCTGACTTATCTGTTAGAA+GGG | + | chr8_1:85074066-85074085 | None:intergenic | 30.0% | |
| ATTCTGACTTATCTGTTAGA+AGG | + | chr8_1:85074067-85074086 | None:intergenic | 30.0% | |
| CTATCATTAGTGTAGTCATT+AGG | + | chr8_1:85074114-85074133 | None:intergenic | 30.0% | |
| ! | GACTACACTAATGATAGTTT+TGG | - | chr8_1:85074117-85074136 | Msa1221480:intron | 30.0% |
| CAATTTGAAGAAACGAAAAC+AGG | - | chr8_1:85074157-85074176 | Msa1221480:intron | 30.0% | |
| CATTGCTTGGTTAGAAATTT+GGG | + | chr8_1:85074300-85074319 | None:intergenic | 30.0% | |
| TTGTGTCTCTTATCACTTAA+GGG | + | chr8_1:85074481-85074500 | None:intergenic | 30.0% | |
| GCTTCACACTAAGTTAATTG+AGG | + | chr8_1:85072245-85072264 | None:intergenic | 35.0% | |
| ATCTAGACAACAGCACAAAA+TGG | - | chr8_1:85072266-85072285 | Msa1221480:three_prime_UTR | 35.0% | |
| TCTAGACAACAGCACAAAAT+GGG | - | chr8_1:85072267-85072286 | Msa1221480:three_prime_UTR | 35.0% | |
| CTATACACAACAAAGACTGT+GGG | + | chr8_1:85072396-85072415 | None:intergenic | 35.0% | |
| GAGTAATTGGTTAAGATCAG+AGG | + | chr8_1:85072491-85072510 | None:intergenic | 35.0% | |
| CAAACTATACCCAATAAGAG+AGG | + | chr8_1:85072642-85072661 | None:intergenic | 35.0% | |
| TATCAAATTACTCATGGCAG+TGG | + | chr8_1:85072810-85072829 | None:intergenic | 35.0% | |
| TGCAGGTATCAAATTACTCA+TGG | + | chr8_1:85072816-85072835 | None:intergenic | 35.0% | |
| GCAAATACAAAGGTTAATGC+AGG | + | chr8_1:85072833-85072852 | None:intergenic | 35.0% | |
| TCTTCGAAGTTTAAGAAACG+TGG | - | chr8_1:85073014-85073033 | Msa1221480:CDS | 35.0% | |
| AGAAACGTGGCAAAGATATT+AGG | - | chr8_1:85073027-85073046 | Msa1221480:CDS | 35.0% | |
| GAAACGTGGCAAAGATATTA+GGG | - | chr8_1:85073028-85073047 | Msa1221480:CDS | 35.0% | |
| TTTGAGAAATGCCATGGTTA+AGG | + | chr8_1:85073076-85073095 | None:intergenic | 35.0% | |
| TTAACCATGGCATTTCTCAA+AGG | - | chr8_1:85073075-85073094 | Msa1221480:CDS | 35.0% | |
| ! | ATTTCCTTTGAGAAATGCCA+TGG | + | chr8_1:85073082-85073101 | None:intergenic | 35.0% |
| !!! | GTAGTGTTTTTTGGTCATGT+TGG | - | chr8_1:85073202-85073221 | Msa1221480:CDS | 35.0% |
| AAGAGGAGAATCTTCAAGTA+TGG | - | chr8_1:85073436-85073455 | Msa1221480:intron | 35.0% | |
| ATATGCAGTAAGTCTCTAAC+AGG | - | chr8_1:85073494-85073513 | Msa1221480:CDS | 35.0% | |
| GGTTGAACATTACACAATAC+AGG | + | chr8_1:85073663-85073682 | None:intergenic | 35.0% | |
| ATGCATCATCCATTTCAGTT+TGG | - | chr8_1:85073902-85073921 | Msa1221480:CDS | 35.0% | |
| ATCATCCATTTCAGTTTGGT+AGG | - | chr8_1:85073906-85073925 | Msa1221480:CDS | 35.0% | |
| TCATCCATTTCAGTTTGGTA+GGG | - | chr8_1:85073907-85073926 | Msa1221480:CDS | 35.0% | |
| ! | GTGGTTTGTATATTGTGCTA+TGG | - | chr8_1:85073946-85073965 | Msa1221480:intron | 35.0% |
| GGTTTGTATATTGTGCTATG+GGG | - | chr8_1:85073948-85073967 | Msa1221480:intron | 35.0% | |
| TCTGACTTATCTGTTAGAAG+GGG | + | chr8_1:85074065-85074084 | None:intergenic | 35.0% | |
| ATATATAGCAGAGAGCAAGA+TGG | - | chr8_1:85074085-85074104 | Msa1221480:CDS | 35.0% | |
| GCATTGCTTGGTTAGAAATT+TGG | + | chr8_1:85074301-85074320 | None:intergenic | 35.0% | |
| ! | ACTAATTTTACTTGCACGAG+CGG | + | chr8_1:85074330-85074349 | None:intergenic | 35.0% |
| GTTGTGTCTCTTATCACTTA+AGG | + | chr8_1:85074482-85074501 | None:intergenic | 35.0% | |
| GCTTCACACTAAGTTAATTG+AGG | + | chr8_1:85072245-85072264 | None:intergenic | 35.0% | |
| ATCTAGACAACAGCACAAAA+TGG | - | chr8_1:85072266-85072285 | Msa1221480:three_prime_UTR | 35.0% | |
| TCTAGACAACAGCACAAAAT+GGG | - | chr8_1:85072267-85072286 | Msa1221480:three_prime_UTR | 35.0% | |
| CTATACACAACAAAGACTGT+GGG | + | chr8_1:85072396-85072415 | None:intergenic | 35.0% | |
| GAGTAATTGGTTAAGATCAG+AGG | + | chr8_1:85072491-85072510 | None:intergenic | 35.0% | |
| CAAACTATACCCAATAAGAG+AGG | + | chr8_1:85072642-85072661 | None:intergenic | 35.0% | |
| TATCAAATTACTCATGGCAG+TGG | + | chr8_1:85072810-85072829 | None:intergenic | 35.0% | |
| TGCAGGTATCAAATTACTCA+TGG | + | chr8_1:85072816-85072835 | None:intergenic | 35.0% | |
| GCAAATACAAAGGTTAATGC+AGG | + | chr8_1:85072833-85072852 | None:intergenic | 35.0% | |
| TCTTCGAAGTTTAAGAAACG+TGG | - | chr8_1:85073014-85073033 | Msa1221480:CDS | 35.0% | |
| AGAAACGTGGCAAAGATATT+AGG | - | chr8_1:85073027-85073046 | Msa1221480:CDS | 35.0% | |
| GAAACGTGGCAAAGATATTA+GGG | - | chr8_1:85073028-85073047 | Msa1221480:CDS | 35.0% | |
| TTTGAGAAATGCCATGGTTA+AGG | + | chr8_1:85073076-85073095 | None:intergenic | 35.0% | |
| TTAACCATGGCATTTCTCAA+AGG | - | chr8_1:85073075-85073094 | Msa1221480:CDS | 35.0% | |
| ! | ATTTCCTTTGAGAAATGCCA+TGG | + | chr8_1:85073082-85073101 | None:intergenic | 35.0% |
| !!! | GTAGTGTTTTTTGGTCATGT+TGG | - | chr8_1:85073202-85073221 | Msa1221480:CDS | 35.0% |
| AAGAGGAGAATCTTCAAGTA+TGG | - | chr8_1:85073436-85073455 | Msa1221480:intron | 35.0% | |
| ATATGCAGTAAGTCTCTAAC+AGG | - | chr8_1:85073494-85073513 | Msa1221480:CDS | 35.0% | |
| GGTTGAACATTACACAATAC+AGG | + | chr8_1:85073663-85073682 | None:intergenic | 35.0% | |
| ATGCATCATCCATTTCAGTT+TGG | - | chr8_1:85073902-85073921 | Msa1221480:CDS | 35.0% | |
| ATCATCCATTTCAGTTTGGT+AGG | - | chr8_1:85073906-85073925 | Msa1221480:CDS | 35.0% | |
| TCATCCATTTCAGTTTGGTA+GGG | - | chr8_1:85073907-85073926 | Msa1221480:CDS | 35.0% | |
| ! | GTGGTTTGTATATTGTGCTA+TGG | - | chr8_1:85073946-85073965 | Msa1221480:intron | 35.0% |
| GGTTTGTATATTGTGCTATG+GGG | - | chr8_1:85073948-85073967 | Msa1221480:intron | 35.0% | |
| TCTGACTTATCTGTTAGAAG+GGG | + | chr8_1:85074065-85074084 | None:intergenic | 35.0% | |
| ATATATAGCAGAGAGCAAGA+TGG | - | chr8_1:85074085-85074104 | Msa1221480:CDS | 35.0% | |
| GCATTGCTTGGTTAGAAATT+TGG | + | chr8_1:85074301-85074320 | None:intergenic | 35.0% | |
| ! | ACTAATTTTACTTGCACGAG+CGG | + | chr8_1:85074330-85074349 | None:intergenic | 35.0% |
| GTTGTGTCTCTTATCACTTA+AGG | + | chr8_1:85074482-85074501 | None:intergenic | 35.0% | |
| CACAAAATGGGTGGTTTAGA+TGG | - | chr8_1:85072279-85072298 | Msa1221480:three_prime_UTR | 40.0% | |
| TAGAGCAGCTCTTGTAAACA+TGG | + | chr8_1:85072358-85072377 | None:intergenic | 40.0% | |
| ACAAGAGCTGCTCTATTAGA+TGG | - | chr8_1:85072363-85072382 | Msa1221480:three_prime_UTR | 40.0% | |
| CCTATACACAACAAAGACTG+TGG | + | chr8_1:85072397-85072416 | None:intergenic | 40.0% | |
| ! | CCACAGTCTTTGTTGTGTAT+AGG | - | chr8_1:85072394-85072413 | Msa1221480:three_prime_UTR | 40.0% |
| ! | GTCTTTGTTGTGTATAGGCA+AGG | - | chr8_1:85072399-85072418 | Msa1221480:three_prime_UTR | 40.0% |
| TGGAGATGATACTTGGATTC+TGG | - | chr8_1:85073158-85073177 | Msa1221480:intron | 40.0% | |
| GGAGATGATACTTGGATTCT+GGG | - | chr8_1:85073159-85073178 | Msa1221480:intron | 40.0% | |
| TCCGGACAAGATGAAGAAAT+CGG | + | chr8_1:85073348-85073367 | None:intergenic | 40.0% | |
| CATCCATTTCAGTTTGGTAG+GGG | - | chr8_1:85073908-85073927 | Msa1221480:CDS | 40.0% | |
| TCATCCTGCATTTGTGATTG+TGG | + | chr8_1:85074011-85074030 | None:intergenic | 40.0% | |
| CACAAAATGGGTGGTTTAGA+TGG | - | chr8_1:85072279-85072298 | Msa1221480:three_prime_UTR | 40.0% | |
| TAGAGCAGCTCTTGTAAACA+TGG | + | chr8_1:85072358-85072377 | None:intergenic | 40.0% | |
| ACAAGAGCTGCTCTATTAGA+TGG | - | chr8_1:85072363-85072382 | Msa1221480:three_prime_UTR | 40.0% | |
| CCTATACACAACAAAGACTG+TGG | + | chr8_1:85072397-85072416 | None:intergenic | 40.0% | |
| ! | CCACAGTCTTTGTTGTGTAT+AGG | - | chr8_1:85072394-85072413 | Msa1221480:three_prime_UTR | 40.0% |
| ! | GTCTTTGTTGTGTATAGGCA+AGG | - | chr8_1:85072399-85072418 | Msa1221480:three_prime_UTR | 40.0% |
| TGGAGATGATACTTGGATTC+TGG | - | chr8_1:85073158-85073177 | Msa1221480:intron | 40.0% | |
| GGAGATGATACTTGGATTCT+GGG | - | chr8_1:85073159-85073178 | Msa1221480:intron | 40.0% | |
| TCCGGACAAGATGAAGAAAT+CGG | + | chr8_1:85073348-85073367 | None:intergenic | 40.0% | |
| CATCCATTTCAGTTTGGTAG+GGG | - | chr8_1:85073908-85073927 | Msa1221480:CDS | 40.0% | |
| TCATCCTGCATTTGTGATTG+TGG | + | chr8_1:85074011-85074030 | None:intergenic | 40.0% | |
| AGACAACAGCACAAAATGGG+TGG | - | chr8_1:85072270-85072289 | Msa1221480:three_prime_UTR | 45.0% | |
| GGGACAATATGTTGTGTCAG+TGG | - | chr8_1:85073048-85073067 | Msa1221480:CDS | 45.0% | |
| ! | GCAGTGAGATGTTTGGAATC+AGG | + | chr8_1:85073135-85073154 | None:intergenic | 45.0% |
| TCCAAACATCTCACTGCAAG+TGG | - | chr8_1:85073138-85073157 | Msa1221480:intron | 45.0% | |
| TCCACTTGCAGTGAGATGTT+TGG | + | chr8_1:85073142-85073161 | None:intergenic | 45.0% | |
| CTGCAAGTGGAGATGATACT+TGG | - | chr8_1:85073151-85073170 | Msa1221480:intron | 45.0% | |
| GTCATGTTGGATGATCATGC+AGG | - | chr8_1:85073215-85073234 | Msa1221480:CDS | 45.0% | |
| ! | GCCGATTTCTTCATCTTGTC+CGG | - | chr8_1:85073344-85073363 | Msa1221480:intron | 45.0% |
| CTAGCTTCTTCATTCAGTCC+TGG | - | chr8_1:85073617-85073636 | Msa1221480:CDS | 45.0% | |
| ATTCAGTCCTGGTGCATATC+AGG | - | chr8_1:85073628-85073647 | Msa1221480:CDS | 45.0% | |
| CTGTGATGACAGTAGCTAGA+GGG | + | chr8_1:85073684-85073703 | None:intergenic | 45.0% | |
| AGCTACTGTCATCACAGCTT+TGG | - | chr8_1:85073687-85073706 | Msa1221480:intron | 45.0% | |
| AAGCCCCTACCAAACTGAAA+TGG | + | chr8_1:85073914-85073933 | None:intergenic | 45.0% | |
| ! | TTCAGTTTGGTAGGGGCTTT+TGG | - | chr8_1:85073915-85073934 | Msa1221480:CDS | 45.0% |
| GCTACCACAATCACAAATGC+AGG | - | chr8_1:85074004-85074023 | Msa1221480:intron | 45.0% | |
| GAGCGGAATAATGCATTGCT+TGG | + | chr8_1:85074313-85074332 | None:intergenic | 45.0% | |
| GATATATAGGGACGCCAAAG+TGG | - | chr8_1:85074452-85074471 | Msa1221480:five_prime_UTR | 45.0% | |
| !! | TCACTTAAGGGTGTCCACTT+TGG | + | chr8_1:85074469-85074488 | None:intergenic | 45.0% |
| AGACAACAGCACAAAATGGG+TGG | - | chr8_1:85072270-85072289 | Msa1221480:three_prime_UTR | 45.0% | |
| GGGACAATATGTTGTGTCAG+TGG | - | chr8_1:85073048-85073067 | Msa1221480:CDS | 45.0% | |
| ! | GCAGTGAGATGTTTGGAATC+AGG | + | chr8_1:85073135-85073154 | None:intergenic | 45.0% |
| TCCAAACATCTCACTGCAAG+TGG | - | chr8_1:85073138-85073157 | Msa1221480:intron | 45.0% | |
| TCCACTTGCAGTGAGATGTT+TGG | + | chr8_1:85073142-85073161 | None:intergenic | 45.0% | |
| CTGCAAGTGGAGATGATACT+TGG | - | chr8_1:85073151-85073170 | Msa1221480:intron | 45.0% | |
| GTCATGTTGGATGATCATGC+AGG | - | chr8_1:85073215-85073234 | Msa1221480:CDS | 45.0% | |
| ! | GCCGATTTCTTCATCTTGTC+CGG | - | chr8_1:85073344-85073363 | Msa1221480:intron | 45.0% |
| CTAGCTTCTTCATTCAGTCC+TGG | - | chr8_1:85073617-85073636 | Msa1221480:CDS | 45.0% | |
| ATTCAGTCCTGGTGCATATC+AGG | - | chr8_1:85073628-85073647 | Msa1221480:CDS | 45.0% | |
| CTGTGATGACAGTAGCTAGA+GGG | + | chr8_1:85073684-85073703 | None:intergenic | 45.0% | |
| AGCTACTGTCATCACAGCTT+TGG | - | chr8_1:85073687-85073706 | Msa1221480:intron | 45.0% | |
| AAGCCCCTACCAAACTGAAA+TGG | + | chr8_1:85073914-85073933 | None:intergenic | 45.0% | |
| ! | TTCAGTTTGGTAGGGGCTTT+TGG | - | chr8_1:85073915-85073934 | Msa1221480:CDS | 45.0% |
| GCTACCACAATCACAAATGC+AGG | - | chr8_1:85074004-85074023 | Msa1221480:intron | 45.0% | |
| GAGCGGAATAATGCATTGCT+TGG | + | chr8_1:85074313-85074332 | None:intergenic | 45.0% | |
| GATATATAGGGACGCCAAAG+TGG | - | chr8_1:85074452-85074471 | Msa1221480:five_prime_UTR | 45.0% | |
| !! | TCACTTAAGGGTGTCCACTT+TGG | + | chr8_1:85074469-85074488 | None:intergenic | 45.0% |
| !! | ACAAAATAAATAATTATAAT+TGG | - | chr8_1:85072713-85072732 | Msa1221480:CDS | 5.0% |
| !! | AATAATAATAATAATCTTAT+AGG | - | chr8_1:85073268-85073287 | Msa1221480:CDS | 5.0% |
| !! | ATAATAATAATAATCTTATA+GGG | - | chr8_1:85073269-85073288 | Msa1221480:CDS | 5.0% |
| !! | ACAAAATAAATAATTATAAT+TGG | - | chr8_1:85072713-85072732 | Msa1221480:CDS | 5.0% |
| !! | AATAATAATAATAATCTTAT+AGG | - | chr8_1:85073268-85073287 | Msa1221480:CDS | 5.0% |
| !! | ATAATAATAATAATCTTATA+GGG | - | chr8_1:85073269-85073288 | Msa1221480:CDS | 5.0% |
| TAGGCAAGGCATAGCCACTT+TGG | - | chr8_1:85072413-85072432 | Msa1221480:three_prime_UTR | 50.0% | |
| ! | AGGCATAGCCACTTTGGCAT+TGG | - | chr8_1:85072419-85072438 | Msa1221480:three_prime_UTR | 50.0% |
| GATAGGTGCCAATGCCAAAG+TGG | + | chr8_1:85072430-85072449 | None:intergenic | 50.0% | |
| TGTCAGTGGAGCCTTAACCA+TGG | - | chr8_1:85073062-85073081 | Msa1221480:CDS | 50.0% | |
| TCCTGGTGCATATCAGGAAG+AGG | - | chr8_1:85073634-85073653 | Msa1221480:CDS | 50.0% | |
| ACCTCTTCCTGATATGCACC+AGG | + | chr8_1:85073638-85073657 | None:intergenic | 50.0% | |
| GCTGTGATGACAGTAGCTAG+AGG | + | chr8_1:85073685-85073704 | None:intergenic | 50.0% | |
| GATGATGCATGTGAGCGAGT+AGG | + | chr8_1:85073892-85073911 | None:intergenic | 50.0% | |
| !!! | GGGGCTTTTGGAGTGATAAG+TGG | - | chr8_1:85073927-85073946 | Msa1221480:CDS | 50.0% |
| TAGGCAAGGCATAGCCACTT+TGG | - | chr8_1:85072413-85072432 | Msa1221480:three_prime_UTR | 50.0% | |
| ! | AGGCATAGCCACTTTGGCAT+TGG | - | chr8_1:85072419-85072438 | Msa1221480:three_prime_UTR | 50.0% |
| GATAGGTGCCAATGCCAAAG+TGG | + | chr8_1:85072430-85072449 | None:intergenic | 50.0% | |
| TGTCAGTGGAGCCTTAACCA+TGG | - | chr8_1:85073062-85073081 | Msa1221480:CDS | 50.0% | |
| TCCTGGTGCATATCAGGAAG+AGG | - | chr8_1:85073634-85073653 | Msa1221480:CDS | 50.0% | |
| ACCTCTTCCTGATATGCACC+AGG | + | chr8_1:85073638-85073657 | None:intergenic | 50.0% | |
| GCTGTGATGACAGTAGCTAG+AGG | + | chr8_1:85073685-85073704 | None:intergenic | 50.0% | |
| GATGATGCATGTGAGCGAGT+AGG | + | chr8_1:85073892-85073911 | None:intergenic | 50.0% | |
| !!! | GGGGCTTTTGGAGTGATAAG+TGG | - | chr8_1:85073927-85073946 | Msa1221480:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 85072198 | 85074503 | 85072198 | ID=Msa1221480;Name=Msa1221480 |
| chr8_1 | mRNA | 85072198 | 85074503 | 85072198 | ID=Msa1221480-mRNA-1;Parent=Msa1221480;Name=Msa1221480-mRNA-1;_AED=0.14;_eAED=0.14;_QI=87|1|1|1|1|1|7|388|370 |
| chr8_1 | exon | 85072198 | 85072781 | 85072198 | ID=Msa1221480-mRNA-1:exon:30595;Parent=Msa1221480-mRNA-1 |
| chr8_1 | exon | 85072952 | 85073100 | 85072952 | ID=Msa1221480-mRNA-1:exon:30594;Parent=Msa1221480-mRNA-1 |
| chr8_1 | exon | 85073201 | 85073359 | 85073201 | ID=Msa1221480-mRNA-1:exon:30593;Parent=Msa1221480-mRNA-1 |
| chr8_1 | exon | 85073465 | 85073702 | 85073465 | ID=Msa1221480-mRNA-1:exon:30592;Parent=Msa1221480-mRNA-1 |
| chr8_1 | exon | 85073837 | 85073953 | 85073837 | ID=Msa1221480-mRNA-1:exon:30591;Parent=Msa1221480-mRNA-1 |
| chr8_1 | exon | 85074050 | 85074118 | 85074050 | ID=Msa1221480-mRNA-1:exon:30590;Parent=Msa1221480-mRNA-1 |
| chr8_1 | exon | 85074232 | 85074503 | 85074232 | ID=Msa1221480-mRNA-1:exon:30589;Parent=Msa1221480-mRNA-1 |
| chr8_1 | five_prime_UTR | 85074417 | 85074503 | 85074417 | ID=Msa1221480-mRNA-1:five_prime_utr;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85074232 | 85074416 | 85074232 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85074050 | 85074118 | 85074050 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85073837 | 85073953 | 85073837 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85073465 | 85073702 | 85073465 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85073201 | 85073359 | 85073201 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85072952 | 85073100 | 85072952 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | CDS | 85072586 | 85072781 | 85072586 | ID=Msa1221480-mRNA-1:cds;Parent=Msa1221480-mRNA-1 |
| chr8_1 | three_prime_UTR | 85072198 | 85072585 | 85072198 | ID=Msa1221480-mRNA-1:three_prime_utr;Parent=Msa1221480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
