Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227600 | XP_003628629.1 | 85.667 | 300 | 25 | 2 | 1 | 284 | 1 | 298 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227600 | sp|O04373|ILL4_ARATH | 52.000 | 275 | 114 | 1 | 30 | 286 | 24 | 298 | 1.80e-98 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227600 | G7LER0 | 85.667 | 300 | 25 | 2 | 1 | 284 | 1 | 298 | 0.0 | 524 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0754680 | Msa1227600 | 0.812195 | 4.790449e-51 | -8.615850e-47 |
| Msa0797350 | Msa1227600 | 0.823035 | 1.719969e-53 | -8.615850e-47 |
| Msa1227600 | Msa1290110 | 0.839619 | 1.421677e-57 | -8.615850e-47 |
| Msa1227600 | Msa1387130 | 0.900353 | 7.974194e-78 | -8.615850e-47 |
| Msa1227600 | Msa1397890 | 0.900828 | 4.957476e-78 | -8.615850e-47 |
| Msa1194460 | Msa1227600 | 0.807826 | 4.180578e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227600 | MtrunA17_Chr8g0364301 | 85.667 | 300 | 25 | 2 | 1 | 284 | 1 | 298 | 0.0 | 524 |
| Msa1227600 | MtrunA17_Chr8g0371561 | 73.443 | 305 | 60 | 3 | 1 | 284 | 1 | 305 | 6.26e-161 | 454 |
| Msa1227600 | MtrunA17_Chr8g0341471 | 50.171 | 293 | 120 | 3 | 18 | 284 | 7 | 299 | 6.08e-99 | 297 |
| Msa1227600 | MtrunA17_Chr2g0330671 | 48.649 | 296 | 133 | 2 | 8 | 284 | 11 | 306 | 2.09e-98 | 296 |
| Msa1227600 | MtrunA17_Chr2g0330661 | 53.818 | 275 | 108 | 2 | 28 | 284 | 29 | 302 | 2.11e-98 | 296 |
| Msa1227600 | MtrunA17_Chr2g0330721 | 51.825 | 274 | 113 | 2 | 32 | 287 | 38 | 310 | 3.26e-95 | 288 |
| Msa1227600 | MtrunA17_Chr3g0124881 | 51.087 | 276 | 117 | 1 | 27 | 284 | 70 | 345 | 1.19e-94 | 287 |
| Msa1227600 | MtrunA17_Chr2g0328461 | 51.880 | 266 | 110 | 1 | 40 | 287 | 44 | 309 | 1.08e-93 | 284 |
| Msa1227600 | MtrunA17_Chr3g0128101 | 49.012 | 253 | 111 | 1 | 53 | 287 | 39 | 291 | 2.84e-85 | 261 |
| Msa1227600 | MtrunA17_Chr2g0328471 | 55.828 | 163 | 69 | 2 | 2 | 164 | 1 | 160 | 1.77e-59 | 187 |
| Msa1227600 | MtrunA17_Chr2g0330711 | 57.407 | 162 | 66 | 2 | 2 | 163 | 1 | 159 | 6.00e-59 | 185 |
| Msa1227600 | MtrunA17_Chr8g0364461 | 53.977 | 176 | 52 | 4 | 122 | 284 | 96 | 255 | 6.65e-50 | 170 |
| Msa1227600 | MtrunA17_Chr2g0328481 | 31.148 | 183 | 63 | 2 | 165 | 284 | 4 | 186 | 4.96e-21 | 91.3 |
| Msa1227600 | MtrunA17_Chr3g0128121 | 63.415 | 41 | 15 | 0 | 137 | 177 | 1 | 41 | 6.06e-12 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227600 | AT1G51760.1 | 52.000 | 275 | 114 | 1 | 30 | 286 | 24 | 298 | 1.83e-99 | 298 |
| Msa1227600 | AT1G51780.1 | 49.153 | 295 | 127 | 2 | 8 | 284 | 7 | 296 | 4.69e-97 | 292 |
| Msa1227600 | AT5G56660.1 | 52.416 | 269 | 110 | 2 | 31 | 281 | 28 | 296 | 2.27e-95 | 288 |
| Msa1227600 | AT5G56650.2 | 52.593 | 270 | 110 | 2 | 30 | 281 | 26 | 295 | 1.09e-93 | 279 |
| Msa1227600 | AT5G56650.1 | 52.593 | 270 | 110 | 2 | 30 | 281 | 26 | 295 | 4.83e-92 | 280 |
| Msa1227600 | AT5G54140.1 | 48.311 | 296 | 121 | 4 | 10 | 284 | 6 | 290 | 3.46e-89 | 272 |
| Msa1227600 | AT1G44350.1 | 48.921 | 278 | 115 | 3 | 27 | 284 | 62 | 332 | 5.31e-89 | 273 |
| Msa1227600 | AT3G02875.2 | 47.727 | 264 | 120 | 1 | 36 | 281 | 34 | 297 | 1.46e-84 | 257 |
| Msa1227600 | AT3G02875.1 | 47.727 | 264 | 120 | 1 | 36 | 281 | 34 | 297 | 3.92e-83 | 257 |
| Msa1227600 | AT3G02875.3 | 47.692 | 260 | 114 | 3 | 36 | 273 | 34 | 293 | 3.43e-75 | 232 |
Find 87 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGATGCTTTGCCAATTC+AGG | 0.247866 | 8_2:+2910560 | Msa1227600:CDS |
| TTCATCCATTTCACTGTGTT+GGG | 0.250801 | 8_2:-2910357 | None:intergenic |
| GCCCATGTTGCGATGCTTCT+TGG | 0.288317 | 8_2:+2911801 | Msa1227600:CDS |
| CAATGGCCTGTTGCTAAAAC+TGG | 0.311143 | 8_2:+2910483 | Msa1227600:CDS |
| CCTCCAAATGTTACTGAATC+AGG | 0.311713 | 8_2:-2912413 | None:intergenic |
| GCATTGTCTTGATCCTGTTT+TGG | 0.317241 | 8_2:+2912157 | Msa1227600:CDS |
| CTTCATCCATTTCACTGTGT+TGG | 0.318859 | 8_2:-2910358 | None:intergenic |
| TTCCAACCAGCTGAGGAAAA+AGG | 0.321874 | 8_2:+2911958 | Msa1227600:CDS |
| AGAAATGAAAGATAAATTAA+AGG | 0.322052 | 8_2:+2911842 | Msa1227600:CDS |
| GTTGTTGCTAAGATTGGTTC+TGG | 0.322981 | 8_2:+2910507 | Msa1227600:CDS |
| CTAATTATGCTTCAGGAGTT+CGG | 0.339989 | 8_2:+2914681 | Msa1227600:three_prime_UTR |
| ATGGAAGCTAATTATGCTTC+AGG | 0.340847 | 8_2:+2914674 | Msa1227600:three_prime_UTR |
| ACTGCAGAGGTTGAGTTCTT+TGG | 0.343440 | 8_2:+2914157 | Msa1227600:three_prime_UTR |
| ATTCCTGATTCAGTAACATT+TGG | 0.347097 | 8_2:+2912410 | Msa1227600:CDS |
| AATTCCTCATATCCAAGTTC+TGG | 0.350678 | 8_2:-2910408 | None:intergenic |
| ACTGGAGTTGTTGCTAAGAT+TGG | 0.366699 | 8_2:+2910501 | Msa1227600:CDS |
| AGGACTATGAGCTGAATATA+TGG | 0.368562 | 8_2:-2914379 | None:intergenic |
| TAATTATGCTTCAGGAGTTC+GGG | 0.378638 | 8_2:+2914682 | Msa1227600:three_prime_UTR |
| CAAGTCTTAGATGATTGTTT+AGG | 0.382508 | 8_2:-2910224 | None:intergenic |
| TCAGCTCTAAGAGCAATAAA+AGG | 0.385249 | 8_2:-2910537 | None:intergenic |
| AATTAGCCCAACATATTAGA+TGG | 0.387344 | 8_2:+2914655 | Msa1227600:three_prime_UTR |
| ATCCAAGTTCTGGATATTCA+TGG | 0.393550 | 8_2:-2910398 | None:intergenic |
| GCCAACAGGAACTTGTTGAT+TGG | 0.403152 | 8_2:+2911730 | Msa1227600:intron |
| CTCTCATCATTTGTAGTTGG+AGG | 0.409256 | 8_2:-2914199 | None:intergenic |
| GACATTGAAGCGGCCAAAAC+AGG | 0.415065 | 8_2:-2912170 | None:intergenic |
| GATCATAAGAGCAAAGTAGA+TGG | 0.419049 | 8_2:+2911753 | Msa1227600:CDS |
| ATTCTCTCATCATTTGTAGT+TGG | 0.422375 | 8_2:-2914202 | None:intergenic |
| CCAACAGGAACTTGTTGATT+GGG | 0.431956 | 8_2:+2911731 | Msa1227600:intron |
| GCAGGTCCTTTCTGTGGCAA+TGG | 0.442153 | 8_2:+2912361 | Msa1227600:intron |
| TTTGTAGTTGGAGGGATTGT+TGG | 0.442878 | 8_2:-2914190 | None:intergenic |
| CCTGATTCAGTAACATTTGG+AGG | 0.445538 | 8_2:+2912413 | Msa1227600:CDS |
| AGGCGTGAGCTTGACAAGTT+AGG | 0.445889 | 8_2:+2910450 | Msa1227600:CDS |
| TAGCTTCCATCTAATATGTT+GGG | 0.447610 | 8_2:-2914661 | None:intergenic |
| CAAGCATCAAGTATGATTGT+TGG | 0.450241 | 8_2:+2914241 | Msa1227600:three_prime_UTR |
| GGTGGATCCTTTAGATTCCC+AGG | 0.458247 | 8_2:+2912226 | Msa1227600:CDS |
| AGAACCCCAACACAGTGAAA+TGG | 0.460531 | 8_2:+2910352 | Msa1227600:CDS |
| ATCCATGAATATCCAGAACT+TGG | 0.462489 | 8_2:+2910396 | Msa1227600:CDS |
| GCTTGCAAAACATTGTTTCA+AGG | 0.463506 | 8_2:+2912201 | Msa1227600:CDS |
| TGTGAATACCTAAGAGGAAA+AGG | 0.464854 | 8_2:-2914341 | None:intergenic |
| TTAGCTTCCATCTAATATGT+TGG | 0.474036 | 8_2:-2914662 | None:intergenic |
| CCACTTTACCACATGAATGA+TGG | 0.485530 | 8_2:+2910200 | Msa1227600:exon |
| GGTATTCACAATGAGAAGGT+TGG | 0.489119 | 8_2:+2914354 | Msa1227600:three_prime_UTR |
| GCTTCAAAGCAAAGATCAAA+GGG | 0.489839 | 8_2:+2912115 | Msa1227600:CDS |
| ATATCCAGAACTTGGATATG+AGG | 0.491903 | 8_2:+2910404 | Msa1227600:CDS |
| AAACATTGTTTCAAGGGAGG+TGG | 0.494015 | 8_2:+2912208 | Msa1227600:CDS |
| ACCTAAGAGGAAAAGGAGCC+GGG | 0.495270 | 8_2:-2914334 | None:intergenic |
| TCATGACAAGTTCTGTGATA+AGG | 0.498650 | 8_2:+2910430 | Msa1227600:CDS |
| TACCTAAGAGGAAAAGGAGC+CGG | 0.502573 | 8_2:-2914335 | None:intergenic |
| CTTGCAAAACATTGTTTCAA+GGG | 0.503037 | 8_2:+2912202 | Msa1227600:CDS |
| TCAGAAGAGAATTATAATAG+AGG | 0.504827 | 8_2:+2914534 | Msa1227600:three_prime_UTR |
| CACCAAGAAGCATCGCAACA+TGG | 0.504864 | 8_2:-2911803 | None:intergenic |
| TCTCATTGTGAATACCTAAG+AGG | 0.507391 | 8_2:-2914347 | None:intergenic |
| TTGATGCTTGTCTTCCAAGT+TGG | 0.517245 | 8_2:-2914228 | None:intergenic |
| GCATGTATCGCAGCACCAAT+GGG | 0.522841 | 8_2:-2914429 | None:intergenic |
| TCTCATCATTTGTAGTTGGA+GGG | 0.526258 | 8_2:-2914198 | None:intergenic |
| TCATCCATTTCACTGTGTTG+GGG | 0.526334 | 8_2:-2910356 | None:intergenic |
| AATAGTAGTTTGTAATAGCA+AGG | 0.528710 | 8_2:-2914575 | None:intergenic |
| AGTTAGGTGTATCTTATCAA+TGG | 0.532989 | 8_2:+2910466 | Msa1227600:CDS |
| GACTCAACCTGGGAATCTAA+AGG | 0.533267 | 8_2:-2912233 | None:intergenic |
| AGCTTCAAAGCAAAGATCAA+AGG | 0.536103 | 8_2:+2912114 | Msa1227600:CDS |
| GATGAAGATGTTCTTCCCAT+TGG | 0.537284 | 8_2:+2914414 | Msa1227600:three_prime_UTR |
| CCATCATTCATGTGGTAAAG+TGG | 0.539838 | 8_2:-2910200 | None:intergenic |
| TATTGCTCTTAGAGCTGACA+TGG | 0.551848 | 8_2:+2910542 | Msa1227600:CDS |
| AAAATCTTCACTCGCTGTGT+AGG | 0.554083 | 8_2:-2914290 | None:intergenic |
| TGCATGTATCGCAGCACCAA+TGG | 0.554871 | 8_2:-2914430 | None:intergenic |
| ATCATAAGAGCAAAGTAGAT+GGG | 0.556957 | 8_2:+2911754 | Msa1227600:CDS |
| TCTTCACTCGCTGTGTAGGT+TGG | 0.559495 | 8_2:-2914286 | None:intergenic |
| GATGAGAGAATACACCAACT+TGG | 0.573593 | 8_2:+2914214 | Msa1227600:three_prime_UTR |
| CTTAGGTATTCACAATGAGA+AGG | 0.574770 | 8_2:+2914350 | Msa1227600:three_prime_UTR |
| GCTTCAATGCACTAAGGCAA+AGG | 0.584166 | 8_2:+2912461 | Msa1227600:exon |
| AATTCTGCAGGTCCTTTCTG+TGG | 0.585555 | 8_2:+2912355 | Msa1227600:intron |
| AGTGGACCATTGCCACAGAA+AGG | 0.591959 | 8_2:-2912367 | None:intergenic |
| GTTTAGGTCCATCATTCATG+TGG | 0.592468 | 8_2:-2910208 | None:intergenic |
| TCTTATATTCCAACCAGCTG+AGG | 0.592807 | 8_2:+2911951 | Msa1227600:CDS |
| GCAAAACATTGTTTCAAGGG+AGG | 0.595201 | 8_2:+2912205 | Msa1227600:CDS |
| GTACTATTAAATATCTCAGA+AGG | 0.601606 | 8_2:+2914615 | Msa1227600:three_prime_UTR |
| AAGGGCAAGCAAAAGTACAT+AGG | 0.610471 | 8_2:+2914131 | Msa1227600:three_prime_UTR |
| ACCAAGAAGCATCGCAACAT+GGG | 0.617744 | 8_2:-2911802 | None:intergenic |
| GCTCTAAGAGCAATAAAAGG+AGG | 0.618553 | 8_2:-2910534 | None:intergenic |
| TGAGATATTTAATAGTACAA+TGG | 0.618607 | 8_2:-2914610 | None:intergenic |
| AGTACATAGGTGCACTGCAG+AGG | 0.622649 | 8_2:+2914144 | Msa1227600:three_prime_UTR |
| GCTAATCACCGACATTGAAG+CGG | 0.632072 | 8_2:-2912180 | None:intergenic |
| AAATGTGCTTGAAGATGTAG+TGG | 0.633529 | 8_2:+2912008 | Msa1227600:CDS |
| ACTAAGGCAAAGGATAGAAG+AGG | 0.641015 | 8_2:+2912471 | Msa1227600:exon |
| TCTTCATCAATAAAATAGTG+AGG | 0.665866 | 8_2:-2914399 | None:intergenic |
| CTTCAAAGCAAAGATCAAAG+GGG | 0.724577 | 8_2:+2912116 | Msa1227600:CDS |
| GTTCATGAGAAGACTCTGAG+TGG | 0.725565 | 8_2:-2912385 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAACAGTAAAATTA+AGG | + | chr8_2:2911107-2911126 | Msa1227600:intron | 10.0% |
| !!! | ATGTCAATTATTTTTTATTA+AGG | + | chr8_2:2911202-2911221 | Msa1227600:intron | 10.0% |
| !! | TTACTATTTATTACTCATAT+AGG | + | chr8_2:2910949-2910968 | Msa1227600:intron | 15.0% |
| !!! | TTATTTTTTATTAAGGAAAG+TGG | + | chr8_2:2911209-2911228 | Msa1227600:intron | 15.0% |
| !! | TAGTTTAATATTACCATTTA+CGG | + | chr8_2:2911572-2911591 | Msa1227600:intron | 15.0% |
| !! | AGAAATGAAAGATAAATTAA+AGG | + | chr8_2:2911842-2911861 | Msa1227600:CDS | 15.0% |
| !!! | ACAATTTTTCAAATTGTTAT+TGG | + | chr8_2:2913940-2913959 | Msa1227600:intron | 15.0% |
| !!! | TTTATTTTTGTTACCTGAAT+TGG | - | chr8_2:2910576-2910595 | None:intergenic | 20.0% |
| !!! | TATAATTTTTGCAAAAATCG+CGG | + | chr8_2:2910769-2910788 | Msa1227600:intron | 20.0% |
| !! | TGATCTTTGTAAAAAATTTG+AGG | + | chr8_2:2910896-2910915 | Msa1227600:intron | 20.0% |
| !! | AGGTACAATATTAATAGAAA+AGG | - | chr8_2:2911263-2911282 | None:intergenic | 20.0% |
| !! | AAAAACAAATCAGATGTTAT+AGG | - | chr8_2:2911481-2911500 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTATATTGCAAGT+TGG | + | chr8_2:2911492-2911511 | Msa1227600:intron | 20.0% |
| !! | AAGATAAATTAAAGGTAAAG+TGG | + | chr8_2:2911850-2911869 | Msa1227600:intron | 20.0% |
| !! | TTGATATTGTTGAAAATTAC+AGG | - | chr8_2:2912615-2912634 | None:intergenic | 20.0% |
| !!! | TGTAATTTTCAACAATATCA+AGG | + | chr8_2:2912614-2912633 | Msa1227600:intron | 20.0% |
| !! | ATCTGTAAATATCAAAACAA+TGG | - | chr8_2:2913293-2913312 | None:intergenic | 20.0% |
| !!! | AGTCTATAATTTATAGGTTT+TGG | + | chr8_2:2913739-2913758 | Msa1227600:intron | 20.0% |
| !! | TGAGATATTTAATAGTACAA+TGG | - | chr8_2:2914613-2914632 | None:intergenic | 20.0% |
| ! | ATTTGAGGAAAAAAATGAGA+AGG | + | chr8_2:2910911-2910930 | Msa1227600:intron | 25.0% |
| ! | TGTATGAGAAAAATGAAAAG+TGG | + | chr8_2:2910983-2911002 | Msa1227600:intron | 25.0% |
| ! | TTCTATTAATATTGTACCTG+AGG | + | chr8_2:2911264-2911283 | Msa1227600:intron | 25.0% |
| !! | TCTTTTGTAATACCAATTCA+TGG | + | chr8_2:2911305-2911324 | Msa1227600:intron | 25.0% |
| !!! | TTAATCTTCTAGGACTAATT+TGG | + | chr8_2:2911636-2911655 | Msa1227600:intron | 25.0% |
| ! | ATATTTCTTGGAAGCAATTA+CGG | - | chr8_2:2911662-2911681 | None:intergenic | 25.0% |
| ! | ACTTATTGTGCTATATTTCT+TGG | - | chr8_2:2911674-2911693 | None:intergenic | 25.0% |
| ! | AATTAAAGGTAAAGTGGAAT+TGG | + | chr8_2:2911856-2911875 | Msa1227600:intron | 25.0% |
| ! | AGAAATAATGTGTGAAAACT+TGG | - | chr8_2:2912280-2912299 | None:intergenic | 25.0% |
| ! | TGAAAATTACAGGAAAAACA+CGG | - | chr8_2:2912605-2912624 | None:intergenic | 25.0% |
| ! | TTGATATTTACAGATTTCGA+TGG | + | chr8_2:2913298-2913317 | Msa1227600:intron | 25.0% |
| !! | TAACTGAATCACAAACATTT+TGG | + | chr8_2:2913485-2913504 | Msa1227600:intron | 25.0% |
| ! | AAGTGCAGTCTATAATTTAT+AGG | + | chr8_2:2913733-2913752 | Msa1227600:intron | 25.0% |
| !!! | CTATAATTTATAGGTTTTGG+AGG | + | chr8_2:2913742-2913761 | Msa1227600:intron | 25.0% |
| ! | ATGTTGTGATTCTTGATATT+GGG | - | chr8_2:2913819-2913838 | None:intergenic | 25.0% |
| ! | TATGTTGTGATTCTTGATAT+TGG | - | chr8_2:2913820-2913839 | None:intergenic | 25.0% |
| !!! | ATAATGAAGGCTCTAAATTA+CGG | - | chr8_2:2913848-2913867 | None:intergenic | 25.0% |
| !!! | ATTTGTTTGACTTTTTGTAC+AGG | + | chr8_2:2914102-2914121 | Msa1227600:intron | 25.0% |
| !! | TTTTTGTACAGGTTATCAAA+GGG | + | chr8_2:2914113-2914132 | Msa1227600:intron | 25.0% |
| !! | TGAAGATTTTGCATTTTACT+TGG | + | chr8_2:2914303-2914322 | Msa1227600:three_prime_UTR | 25.0% |
| ! | TCTTCATCAATAAAATAGTG+AGG | - | chr8_2:2914402-2914421 | None:intergenic | 25.0% |
| ! | TCAGAAGAGAATTATAATAG+AGG | + | chr8_2:2914534-2914553 | Msa1227600:three_prime_UTR | 25.0% |
| !! | AATAGTAGTTTGTAATAGCA+AGG | - | chr8_2:2914578-2914597 | None:intergenic | 25.0% |
| ! | GTACTATTAAATATCTCAGA+AGG | + | chr8_2:2914615-2914634 | Msa1227600:three_prime_UTR | 25.0% |
| CAAGTCTTAGATGATTGTTT+AGG | - | chr8_2:2910227-2910246 | None:intergenic | 30.0% | |
| ACTGAAAAATCAGATTGTTG+AGG | + | chr8_2:2910323-2910342 | Msa1227600:CDS | 30.0% | |
| AGTTAGGTGTATCTTATCAA+TGG | + | chr8_2:2910466-2910485 | Msa1227600:CDS | 30.0% | |
| ! | AACACAAGAAAGTGAAGTTT+TGG | - | chr8_2:2910610-2910629 | None:intergenic | 30.0% |
| AAACTTCAACAAAATCACCA+TGG | - | chr8_2:2910744-2910763 | None:intergenic | 30.0% | |
| CAAAACATGCAGAAACATTA+TGG | + | chr8_2:2910827-2910846 | Msa1227600:intron | 30.0% | |
| GCATGTTTGATATAATGCTA+TGG | + | chr8_2:2910856-2910875 | Msa1227600:intron | 30.0% | |
| TGTCATCATTCTTCATAAGT+AGG | + | chr8_2:2911022-2911041 | Msa1227600:intron | 30.0% | |
| GTCATCATTCTTCATAAGTA+GGG | + | chr8_2:2911023-2911042 | Msa1227600:intron | 30.0% | |
| !! | AATTGAAGAGTTTCAAGTTG+TGG | + | chr8_2:2911062-2911081 | Msa1227600:intron | 30.0% |
| !! | ATTGAAGAGTTTCAAGTTGT+GGG | + | chr8_2:2911063-2911082 | Msa1227600:intron | 30.0% |
| ACAAACTTCAGAATTAATGC+AGG | - | chr8_2:2911135-2911154 | None:intergenic | 30.0% | |
| TCTTGTCATGTAATTGAGAA+TGG | + | chr8_2:2911154-2911173 | Msa1227600:intron | 30.0% | |
| ! | AATTAGCTGATTTAATCCTC+AGG | - | chr8_2:2911283-2911302 | None:intergenic | 30.0% |
| ! | CGAAATTTGAAACCATGAAT+TGG | - | chr8_2:2911320-2911339 | None:intergenic | 30.0% |
| TTATATTGAGGATGCAAATG+CGG | - | chr8_2:2911351-2911370 | None:intergenic | 30.0% | |
| CCTCAAAATCGTTTATATTG+AGG | - | chr8_2:2911363-2911382 | None:intergenic | 30.0% | |
| ! | CCTCAATATAAACGATTTTG+AGG | + | chr8_2:2911360-2911379 | Msa1227600:intron | 30.0% |
| ATGTTATAGGACATAGTAAG+AGG | - | chr8_2:2911468-2911487 | None:intergenic | 30.0% | |
| TTTGCTTAAGCTAAGTATAC+AGG | + | chr8_2:2911609-2911628 | Msa1227600:intron | 30.0% | |
| TACCAGATTAAGGATTTGAT+GGG | - | chr8_2:2911702-2911721 | None:intergenic | 30.0% | |
| ATACCAGATTAAGGATTTGA+TGG | - | chr8_2:2911703-2911722 | None:intergenic | 30.0% | |
| ATCATAAGAGCAAAGTAGAT+GGG | + | chr8_2:2911754-2911773 | Msa1227600:CDS | 30.0% | |
| !!! | GTGAAGGATTTAGTTTTCAA+TGG | - | chr8_2:2911914-2911933 | None:intergenic | 30.0% |
| CTTGCAAAACATTGTTTCAA+GGG | + | chr8_2:2912202-2912221 | Msa1227600:CDS | 30.0% | |
| ATTCCTGATTCAGTAACATT+TGG | + | chr8_2:2912410-2912429 | Msa1227600:CDS | 30.0% | |
| AAAAAAGCTTCAATGCACTA+AGG | + | chr8_2:2912455-2912474 | Msa1227600:CDS | 30.0% | |
| TTATAGTCATGATGTAGTTG+TGG | - | chr8_2:2912567-2912586 | None:intergenic | 30.0% | |
| CTACATCATGACTATAATTG+AGG | + | chr8_2:2912570-2912589 | Msa1227600:intron | 30.0% | |
| GACTATAATTGAGGTTGTAT+CGG | + | chr8_2:2912579-2912598 | Msa1227600:intron | 30.0% | |
| ! | CAGTTTACAGTAAAAGGTTT+TGG | + | chr8_2:2912675-2912694 | Msa1227600:intron | 30.0% |
| !! | GAAAGGTATTTGATTGAAGA+TGG | - | chr8_2:2912926-2912945 | None:intergenic | 30.0% |
| !! | CAGTTTTAGTACAAGAAGAA+AGG | - | chr8_2:2912943-2912962 | None:intergenic | 30.0% |
| ! | AATTTTTGCATGTGCAAAGT+AGG | - | chr8_2:2913069-2913088 | None:intergenic | 30.0% |
| AAATATCAAAACAATGGCGA+CGG | - | chr8_2:2913287-2913306 | None:intergenic | 30.0% | |
| !! | TGAATCACAAACATTTTGGT+TGG | + | chr8_2:2913489-2913508 | Msa1227600:intron | 30.0% |
| ! | GTTAATCTCCTCCTTTTAAT+AGG | + | chr8_2:2913613-2913632 | Msa1227600:intron | 30.0% |
| CATTTGACAGTACTTTATCA+AGG | + | chr8_2:2913680-2913699 | Msa1227600:intron | 30.0% | |
| TAAAACCATGACAACAATTG+TGG | - | chr8_2:2913713-2913732 | None:intergenic | 30.0% | |
| CTTGATATTGGGATAAAGTT+CGG | - | chr8_2:2913808-2913827 | None:intergenic | 30.0% | |
| TACGTATGTGACAATAATGA+AGG | - | chr8_2:2913861-2913880 | None:intergenic | 30.0% | |
| ATTGTTTGTAACACATGTAC+CGG | - | chr8_2:2913925-2913944 | None:intergenic | 30.0% | |
| ! | CTTTTTGTACAGGTTATCAA+AGG | + | chr8_2:2914112-2914131 | Msa1227600:intron | 30.0% |
| ATTCTCTCATCATTTGTAGT+TGG | - | chr8_2:2914205-2914224 | None:intergenic | 30.0% | |
| AATTAGCCCAACATATTAGA+TGG | + | chr8_2:2914655-2914674 | Msa1227600:three_prime_UTR | 30.0% | |
| TAGCTTCCATCTAATATGTT+GGG | - | chr8_2:2914664-2914683 | None:intergenic | 30.0% | |
| TTAGCTTCCATCTAATATGT+TGG | - | chr8_2:2914665-2914684 | None:intergenic | 30.0% | |
| TTCATCCATTTCACTGTGTT+GGG | - | chr8_2:2910360-2910379 | None:intergenic | 35.0% | |
| ATCCATGAATATCCAGAACT+TGG | + | chr8_2:2910396-2910415 | Msa1227600:CDS | 35.0% | |
| !! | ATCCAAGTTCTGGATATTCA+TGG | - | chr8_2:2910401-2910420 | None:intergenic | 35.0% |
| ATATCCAGAACTTGGATATG+AGG | + | chr8_2:2910404-2910423 | Msa1227600:CDS | 35.0% | |
| AATTCCTCATATCCAAGTTC+TGG | - | chr8_2:2910411-2910430 | None:intergenic | 35.0% | |
| TCATGACAAGTTCTGTGATA+AGG | + | chr8_2:2910430-2910449 | Msa1227600:CDS | 35.0% | |
| !! | TCAGCTCTAAGAGCAATAAA+AGG | - | chr8_2:2910540-2910559 | None:intergenic | 35.0% |
| ! | CTTTGAGTTTGTCGAAATCA+AGG | + | chr8_2:2910716-2910735 | Msa1227600:intron | 35.0% |
| !! | TTGAAGAGTTTCAAGTTGTG+GGG | + | chr8_2:2911064-2911083 | Msa1227600:intron | 35.0% |
| ATAAGCTCATTGATGAGTGA+AGG | + | chr8_2:2911541-2911560 | Msa1227600:intron | 35.0% | |
| TAAGCTCATTGATGAGTGAA+GGG | + | chr8_2:2911542-2911561 | Msa1227600:intron | 35.0% | |
| GTTGTACTTTCAACCGTAAA+TGG | - | chr8_2:2911588-2911607 | None:intergenic | 35.0% | |
| TACAGGTGGTTTAATCTTCT+AGG | + | chr8_2:2911626-2911645 | Msa1227600:intron | 35.0% | |
| GATTAAGGATTTGATGGGAA+CGG | - | chr8_2:2911697-2911716 | None:intergenic | 35.0% | |
| TTCCCATCAAATCCTTAATC+TGG | + | chr8_2:2911697-2911716 | Msa1227600:intron | 35.0% | |
| GATCATAAGAGCAAAGTAGA+TGG | + | chr8_2:2911753-2911772 | Msa1227600:CDS | 35.0% | |
| AAACTAAATCCTTCACATGC+AGG | + | chr8_2:2911918-2911937 | Msa1227600:intron | 35.0% | |
| ! | CATCTTCAAGCACATTTTCT+TGG | - | chr8_2:2912005-2912024 | None:intergenic | 35.0% |
| AAATGTGCTTGAAGATGTAG+TGG | + | chr8_2:2912008-2912027 | Msa1227600:CDS | 35.0% | |
| !! | GAAGATGTAGTGGCTATTTT+CGG | + | chr8_2:2912018-2912037 | Msa1227600:CDS | 35.0% |
| AGCTTCAAAGCAAAGATCAA+AGG | + | chr8_2:2912114-2912133 | Msa1227600:CDS | 35.0% | |
| GCTTCAAAGCAAAGATCAAA+GGG | + | chr8_2:2912115-2912134 | Msa1227600:CDS | 35.0% | |
| CTTCAAAGCAAAGATCAAAG+GGG | + | chr8_2:2912116-2912135 | Msa1227600:CDS | 35.0% | |
| GCTTGCAAAACATTGTTTCA+AGG | + | chr8_2:2912201-2912220 | Msa1227600:CDS | 35.0% | |
| TTTAGTGTTTGACTCAACCT+GGG | - | chr8_2:2912246-2912265 | None:intergenic | 35.0% | |
| ! | TTTTAGTGTTTGACTCAACC+TGG | - | chr8_2:2912247-2912266 | None:intergenic | 35.0% |
| CATATGAAGCTAAATTCTGC+AGG | + | chr8_2:2912343-2912362 | Msa1227600:intron | 35.0% | |
| TTGTCATAGTCTGAAGATCA+AGG | + | chr8_2:2912529-2912548 | Msa1227600:intron | 35.0% | |
| ! | TAGTCTGAAGATCAAGGTTT+TGG | + | chr8_2:2912535-2912554 | Msa1227600:intron | 35.0% |
| AGAGTGCAGTTTACAGTAAA+AGG | + | chr8_2:2912669-2912688 | Msa1227600:intron | 35.0% | |
| CTATATCATTGAGACACCAT+TGG | - | chr8_2:2912710-2912729 | None:intergenic | 35.0% | |
| TAAGATCCTTTCAATCCTTG+CGG | - | chr8_2:2913025-2913044 | None:intergenic | 35.0% | |
| ATGTGCAAAGTAGGCATAAA+AGG | - | chr8_2:2913060-2913079 | None:intergenic | 35.0% | |
| TCCAAAGAATCAACATCACA+AGG | + | chr8_2:2913172-2913191 | Msa1227600:intron | 35.0% | |
| !! | ACCTTGTGATGTTGATTCTT+TGG | - | chr8_2:2913176-2913195 | None:intergenic | 35.0% |
| !! | TGATGAAAAAGGCATTCTCA+AGG | - | chr8_2:2913401-2913420 | None:intergenic | 35.0% |
| GTGGAAGAGAATGATGAAAA+AGG | - | chr8_2:2913412-2913431 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGTAGGTTT+GGG | - | chr8_2:2913559-2913578 | None:intergenic | 35.0% | |
| TGAGAATTCTTCAGTAGGTT+TGG | - | chr8_2:2913560-2913579 | None:intergenic | 35.0% | |
| ATCACTGAGAATTCTTCAGT+AGG | - | chr8_2:2913565-2913584 | None:intergenic | 35.0% | |
| GATGCAGTGTTCCTATTAAA+AGG | - | chr8_2:2913627-2913646 | None:intergenic | 35.0% | |
| CATAACCACAATTGTTGTCA+TGG | + | chr8_2:2913705-2913724 | Msa1227600:intron | 35.0% | |
| AGCAGTGACACTTCAAATTA+TGG | + | chr8_2:2913880-2913899 | Msa1227600:intron | 35.0% | |
| GCAGTGACACTTCAAATTAT+GGG | + | chr8_2:2913881-2913900 | Msa1227600:intron | 35.0% | |
| CTTCAAATTATGGGTGTGTA+TGG | + | chr8_2:2913890-2913909 | Msa1227600:intron | 35.0% | |
| ACACACACAATCATCAAAGA+AGG | + | chr8_2:2914045-2914064 | Msa1227600:intron | 35.0% | |
| ACACAATCATCAAAGAAGGA+AGG | + | chr8_2:2914049-2914068 | Msa1227600:intron | 35.0% | |
| TCTCATCATTTGTAGTTGGA+GGG | - | chr8_2:2914201-2914220 | None:intergenic | 35.0% | |
| CAAGCATCAAGTATGATTGT+TGG | + | chr8_2:2914241-2914260 | Msa1227600:three_prime_UTR | 35.0% | |
| !!! | TTTTACTTGGAAAAAGTGCC+CGG | + | chr8_2:2914316-2914335 | Msa1227600:three_prime_UTR | 35.0% |
| TGTGAATACCTAAGAGGAAA+AGG | - | chr8_2:2914344-2914363 | None:intergenic | 35.0% | |
| TCTCATTGTGAATACCTAAG+AGG | - | chr8_2:2914350-2914369 | None:intergenic | 35.0% | |
| CTTAGGTATTCACAATGAGA+AGG | + | chr8_2:2914350-2914369 | Msa1227600:three_prime_UTR | 35.0% | |
| AGGACTATGAGCTGAATATA+TGG | - | chr8_2:2914382-2914401 | None:intergenic | 35.0% | |
| ATGGAAGCTAATTATGCTTC+AGG | + | chr8_2:2914674-2914693 | Msa1227600:three_prime_UTR | 35.0% | |
| CCATCATTCATGTGGTAAAG+TGG | - | chr8_2:2910203-2910222 | None:intergenic | 40.0% | |
| CCACTTTACCACATGAATGA+TGG | + | chr8_2:2910200-2910219 | Msa1227600:exon | 40.0% | |
| GTTTAGGTCCATCATTCATG+TGG | - | chr8_2:2910211-2910230 | None:intergenic | 40.0% | |
| TCATCCATTTCACTGTGTTG+GGG | - | chr8_2:2910359-2910378 | None:intergenic | 40.0% | |
| CTTCATCCATTTCACTGTGT+TGG | - | chr8_2:2910361-2910380 | None:intergenic | 40.0% | |
| !! | ACAACTCCAGTTTTAGCAAC+AGG | - | chr8_2:2910492-2910511 | None:intergenic | 40.0% |
| ACTGGAGTTGTTGCTAAGAT+TGG | + | chr8_2:2910501-2910520 | Msa1227600:CDS | 40.0% | |
| ! | GTTGTTGCTAAGATTGGTTC+TGG | + | chr8_2:2910507-2910526 | Msa1227600:CDS | 40.0% |
| !! | GCTCTAAGAGCAATAAAAGG+AGG | - | chr8_2:2910537-2910556 | None:intergenic | 40.0% |
| TATTGCTCTTAGAGCTGACA+TGG | + | chr8_2:2910542-2910561 | Msa1227600:CDS | 40.0% | |
| ! | TTGTCGAAATCAAGGTACCA+TGG | + | chr8_2:2910724-2910743 | Msa1227600:intron | 40.0% |
| CATAAGTAGGGTAGTAGTGT+TGG | + | chr8_2:2911035-2911054 | Msa1227600:intron | 40.0% | |
| GAGAATGGAGAAAGAAACAG+TGG | + | chr8_2:2911169-2911188 | Msa1227600:intron | 40.0% | |
| AAGCTCATTGATGAGTGAAG+GGG | + | chr8_2:2911543-2911562 | Msa1227600:intron | 40.0% | |
| GCTTAAGCTAAGTATACAGG+TGG | + | chr8_2:2911612-2911631 | Msa1227600:intron | 40.0% | |
| ! | GCAGGAAGTATACCAGATTA+AGG | - | chr8_2:2911712-2911731 | None:intergenic | 40.0% |
| !! | CCAACAGGAACTTGTTGATT+GGG | + | chr8_2:2911731-2911750 | Msa1227600:intron | 40.0% |
| TCTTATATTCCAACCAGCTG+AGG | + | chr8_2:2911951-2911970 | Msa1227600:CDS | 40.0% | |
| ! | GCATTGTCTTGATCCTGTTT+TGG | + | chr8_2:2912157-2912176 | Msa1227600:CDS | 40.0% |
| GCAAAACATTGTTTCAAGGG+AGG | + | chr8_2:2912205-2912224 | Msa1227600:CDS | 40.0% | |
| AAACATTGTTTCAAGGGAGG+TGG | + | chr8_2:2912208-2912227 | Msa1227600:CDS | 40.0% | |
| CCTCCAAATGTTACTGAATC+AGG | - | chr8_2:2912416-2912435 | None:intergenic | 40.0% | |
| CCTGATTCAGTAACATTTGG+AGG | + | chr8_2:2912413-2912432 | Msa1227600:CDS | 40.0% | |
| ACTAAGGCAAAGGATAGAAG+AGG | + | chr8_2:2912471-2912490 | Msa1227600:exon | 40.0% | |
| TTGATTGAAGATGGCAGTGT+TGG | - | chr8_2:2912917-2912936 | None:intergenic | 40.0% | |
| GTCGTCATTGTTCAGATCAT+GGG | - | chr8_2:2912970-2912989 | None:intergenic | 40.0% | |
| ATCATTGACAGTTCGTGCAT+TGG | - | chr8_2:2913107-2913126 | None:intergenic | 40.0% | |
| TGTCTCCTCGGATTTATATC+AGG | + | chr8_2:2913142-2913161 | Msa1227600:intron | 40.0% | |
| AACAGCCTGATATAAATCCG+AGG | - | chr8_2:2913150-2913169 | None:intergenic | 40.0% | |
| ! | ACATCACAAGGTGTTCTCAA+AGG | + | chr8_2:2913184-2913203 | Msa1227600:intron | 40.0% |
| GACATGAATCATTTGCCTCT+AGG | + | chr8_2:2913239-2913258 | Msa1227600:intron | 40.0% | |
| TACAGATTTCGATGGAACCT+TGG | + | chr8_2:2913306-2913325 | Msa1227600:intron | 40.0% | |
| ACAGATTTCGATGGAACCTT+GGG | + | chr8_2:2913307-2913326 | Msa1227600:intron | 40.0% | |
| CATTTCTCAACTTGAACGCA+AGG | + | chr8_2:2913352-2913371 | Msa1227600:intron | 40.0% | |
| TTCTTTAGCAGACAGAAGTG+TGG | - | chr8_2:2913431-2913450 | None:intergenic | 40.0% | |
| ! | TTCTTCAGTAGGTTTGGGAT+CGG | - | chr8_2:2913554-2913573 | None:intergenic | 40.0% |
| CTGAAGAATTCTCAGTGATG+TGG | + | chr8_2:2913566-2913585 | Msa1227600:intron | 40.0% | |
| GAGATTAACTGCTTGTGTCA+AGG | - | chr8_2:2913602-2913621 | None:intergenic | 40.0% | |
| GCAGTGTTCCTATTAAAAGG+AGG | - | chr8_2:2913624-2913643 | None:intergenic | 40.0% | |
| ACTGTCAAATGTGACCTATG+TGG | - | chr8_2:2913671-2913690 | None:intergenic | 40.0% | |
| ! | AAGGGCAAGCAAAAGTACAT+AGG | + | chr8_2:2914131-2914150 | Msa1227600:three_prime_UTR | 40.0% |
| TTTGTAGTTGGAGGGATTGT+TGG | - | chr8_2:2914193-2914212 | None:intergenic | 40.0% | |
| CTCTCATCATTTGTAGTTGG+AGG | - | chr8_2:2914202-2914221 | None:intergenic | 40.0% | |
| GATGAGAGAATACACCAACT+TGG | + | chr8_2:2914214-2914233 | Msa1227600:three_prime_UTR | 40.0% | |
| TTGATGCTTGTCTTCCAAGT+TGG | - | chr8_2:2914231-2914250 | None:intergenic | 40.0% | |
| AAAATCTTCACTCGCTGTGT+AGG | - | chr8_2:2914293-2914312 | None:intergenic | 40.0% | |
| GGTATTCACAATGAGAAGGT+TGG | + | chr8_2:2914354-2914373 | Msa1227600:three_prime_UTR | 40.0% | |
| GATGAAGATGTTCTTCCCAT+TGG | + | chr8_2:2914414-2914433 | Msa1227600:three_prime_UTR | 40.0% | |
| AGAACCCCAACACAGTGAAA+TGG | + | chr8_2:2910352-2910371 | Msa1227600:CDS | 45.0% | |
| CAATGGCCTGTTGCTAAAAC+TGG | + | chr8_2:2910483-2910502 | Msa1227600:CDS | 45.0% | |
| CATGGATGCTTTGCCAATTC+AGG | + | chr8_2:2910560-2910579 | Msa1227600:CDS | 45.0% | |
| ACAATTACGCTGAAACCGTG+CGG | - | chr8_2:2911419-2911438 | None:intergenic | 45.0% | |
| GGTTTCAGCGTAATTGTGAC+TGG | + | chr8_2:2911422-2911441 | Msa1227600:intron | 45.0% | |
| AGCTCATTGATGAGTGAAGG+GGG | + | chr8_2:2911544-2911563 | Msa1227600:intron | 45.0% | |
| ATCAACAAGTTCCTGTTGGC+AGG | - | chr8_2:2911730-2911749 | None:intergenic | 45.0% | |
| !! | GCCAACAGGAACTTGTTGAT+TGG | + | chr8_2:2911730-2911749 | Msa1227600:intron | 45.0% |
| CCCAATCAACAAGTTCCTGT+TGG | - | chr8_2:2911734-2911753 | None:intergenic | 45.0% | |
| !! | ACCAAGAAGCATCGCAACAT+GGG | - | chr8_2:2911805-2911824 | None:intergenic | 45.0% |
| CAATAGTAGCCTGCATGTGA+AGG | - | chr8_2:2911930-2911949 | None:intergenic | 45.0% | |
| TTCCAACCAGCTGAGGAAAA+AGG | + | chr8_2:2911958-2911977 | Msa1227600:CDS | 45.0% | |
| TTAGCGACACAGTATCCCTT+AGG | + | chr8_2:2912048-2912067 | Msa1227600:intron | 45.0% | |
| CATCCTGCTAAAAAATCCCC+CGG | - | chr8_2:2912090-2912109 | None:intergenic | 45.0% | |
| !!! | GGGGATTTTTTAGCAGGATG+TGG | + | chr8_2:2912090-2912109 | Msa1227600:intron | 45.0% |
| !!! | TGTTTTGGCCGCTTCAATGT+CGG | + | chr8_2:2912172-2912191 | Msa1227600:CDS | 45.0% |
| GCTAATCACCGACATTGAAG+CGG | - | chr8_2:2912183-2912202 | None:intergenic | 45.0% | |
| GACTCAACCTGGGAATCTAA+AGG | - | chr8_2:2912236-2912255 | None:intergenic | 45.0% | |
| AATTCTGCAGGTCCTTTCTG+TGG | + | chr8_2:2912355-2912374 | Msa1227600:intron | 45.0% | |
| GTTCATGAGAAGACTCTGAG+TGG | - | chr8_2:2912388-2912407 | None:intergenic | 45.0% | |
| GCTTCAATGCACTAAGGCAA+AGG | + | chr8_2:2912461-2912480 | Msa1227600:exon | 45.0% | |
| !!! | GTTTTGGAGACCTCTACCAA+TGG | + | chr8_2:2912691-2912710 | Msa1227600:intron | 45.0% |
| CATTGAGACACCATTGGTAG+AGG | - | chr8_2:2912704-2912723 | None:intergenic | 45.0% | |
| CGTCGTCATTGTTCAGATCA+TGG | - | chr8_2:2912971-2912990 | None:intergenic | 45.0% | |
| TGATCTGAACAATGACGACG+CGG | + | chr8_2:2912971-2912990 | Msa1227600:intron | 45.0% | |
| ! | TTTCTAGTGCTCTGTCTCCT+CGG | + | chr8_2:2913130-2913149 | Msa1227600:intron | 45.0% |
| ATGTCTAGCATCTGCTACTC+AGG | - | chr8_2:2913224-2913243 | None:intergenic | 45.0% | |
| TGGAACCTTGGGTCTATTGA+AGG | + | chr8_2:2913318-2913337 | Msa1227600:intron | 45.0% | |
| AACCTTGGGTCTATTGAAGG+TGG | + | chr8_2:2913321-2913340 | Msa1227600:intron | 45.0% | |
| TTCCACCTTCAATAGACCCA+AGG | - | chr8_2:2913326-2913345 | None:intergenic | 45.0% | |
| ! | GGTTTGGGATCGGATAAACT+GGG | - | chr8_2:2913544-2913563 | None:intergenic | 45.0% |
| ! | AGGTTTGGGATCGGATAAAC+TGG | - | chr8_2:2913545-2913564 | None:intergenic | 45.0% |
| TGTGTCTGCAATTGCAGTTG+TGG | - | chr8_2:2913771-2913790 | None:intergenic | 45.0% | |
| ! | TGTAACACATGTACCGGTGT+TGG | - | chr8_2:2913919-2913938 | None:intergenic | 45.0% |
| ACTGCAGAGGTTGAGTTCTT+TGG | + | chr8_2:2914157-2914176 | Msa1227600:three_prime_UTR | 45.0% | |
| TACCTAAGAGGAAAAGGAGC+CGG | - | chr8_2:2914338-2914357 | None:intergenic | 45.0% | |
| !!! | ATTATTTAAATAAGTTTTAT+AGG | + | chr8_2:2911881-2911900 | Msa1227600:intron | 5.0% |
| AGGCGTGAGCTTGACAAGTT+AGG | + | chr8_2:2910450-2910469 | Msa1227600:CDS | 50.0% | |
| TGAGGATGCAAATGCGGTTG+CGG | - | chr8_2:2911345-2911364 | None:intergenic | 50.0% | |
| CAATTACGCTGAAACCGTGC+GGG | - | chr8_2:2911418-2911437 | None:intergenic | 50.0% | |
| CTGGTATACTTCCTGCCAAC+AGG | + | chr8_2:2911716-2911735 | Msa1227600:intron | 50.0% | |
| !! | CACCAAGAAGCATCGCAACA+TGG | - | chr8_2:2911806-2911825 | None:intergenic | 50.0% |
| ! | TGCCTTTTTCCTCAGCTGGT+TGG | - | chr8_2:2911963-2911982 | None:intergenic | 50.0% |
| ! | CCTATGCCTTTTTCCTCAGC+TGG | - | chr8_2:2911967-2911986 | None:intergenic | 50.0% |
| ! | CCAGCTGAGGAAAAAGGCAT+AGG | + | chr8_2:2911964-2911983 | Msa1227600:CDS | 50.0% |
| CGTGATGCAACAACGCCTAA+GGG | - | chr8_2:2912066-2912085 | None:intergenic | 50.0% | |
| ! | CCTTAGGCGTTGTTGCATCA+CGG | + | chr8_2:2912064-2912083 | Msa1227600:intron | 50.0% |
| GACATTGAAGCGGCCAAAAC+AGG | - | chr8_2:2912173-2912192 | None:intergenic | 50.0% | |
| GGTGGATCCTTTAGATTCCC+AGG | + | chr8_2:2912226-2912245 | Msa1227600:CDS | 50.0% | |
| AGTGGACCATTGCCACAGAA+AGG | - | chr8_2:2912370-2912389 | None:intergenic | 50.0% | |
| TCCTTTCAATCCTTGCGGCA+AGG | - | chr8_2:2913020-2913039 | None:intergenic | 50.0% | |
| CAATTGTGCTGTGGCCACAT+AGG | + | chr8_2:2913654-2913673 | Msa1227600:intron | 50.0% | |
| GTCTGCAATTGCAGTTGTGG+AGG | - | chr8_2:2913768-2913787 | None:intergenic | 50.0% | |
| AGTACATAGGTGCACTGCAG+AGG | + | chr8_2:2914144-2914163 | Msa1227600:three_prime_UTR | 50.0% | |
| TCTTCACTCGCTGTGTAGGT+TGG | - | chr8_2:2914289-2914308 | None:intergenic | 50.0% | |
| ACCTAAGAGGAAAAGGAGCC+GGG | - | chr8_2:2914337-2914356 | None:intergenic | 50.0% | |
| GCATGTATCGCAGCACCAAT+GGG | - | chr8_2:2914432-2914451 | None:intergenic | 50.0% | |
| TGCATGTATCGCAGCACCAA+TGG | - | chr8_2:2914433-2914452 | None:intergenic | 50.0% | |
| ! | AACTGCGCATTTTGCCCGCA+CGG | + | chr8_2:2911401-2911420 | Msa1227600:intron | 55.0% |
| GCCCATGTTGCGATGCTTCT+TGG | + | chr8_2:2911801-2911820 | Msa1227600:CDS | 55.0% | |
| CCGTGATGCAACAACGCCTA+AGG | - | chr8_2:2912067-2912086 | None:intergenic | 55.0% | |
| GCAGGTCCTTTCTGTGGCAA+TGG | + | chr8_2:2912361-2912380 | Msa1227600:intron | 55.0% | |
| GCCTTGCCGCAAGGATTGAA+AGG | + | chr8_2:2913016-2913035 | Msa1227600:intron | 55.0% | |
| TCGCGACTGCAATTGTGCTG+TGG | + | chr8_2:2913645-2913664 | Msa1227600:intron | 55.0% | |
| GTGTGTATGGCGTCCAACAC+CGG | + | chr8_2:2913903-2913922 | Msa1227600:intron | 55.0% | |
| ! | AGGCGTTGTTGCATCACGGC+CGG | + | chr8_2:2912068-2912087 | Msa1227600:intron | 60.0% |
| !!! | CGGCCGGGGGATTTTTTAGC+AGG | + | chr8_2:2912084-2912103 | Msa1227600:intron | 60.0% |
| TGCGGCAAGGCTCGTACAAG+AGG | - | chr8_2:2913007-2913026 | None:intergenic | 60.0% | |
| CTTGTACGAGCCTTGCCGCA+AGG | + | chr8_2:2913007-2913026 | Msa1227600:intron | 60.0% | |
| GGAAGGTGAGCATGGCCTAG+AGG | - | chr8_2:2913257-2913276 | None:intergenic | 60.0% | |
| AGGCCATGCTCACCTTCCTC+TGG | + | chr8_2:2913259-2913278 | Msa1227600:intron | 60.0% | |
| ! | GCCCGGCTCCTTTTCCTCTT+AGG | + | chr8_2:2914333-2914352 | Msa1227600:three_prime_UTR | 60.0% |
| GGCGTTGTTGCATCACGGCC+GGG | + | chr8_2:2912069-2912088 | Msa1227600:intron | 65.0% | |
| GCGTTGTTGCATCACGGCCG+GGG | + | chr8_2:2912070-2912089 | Msa1227600:intron | 65.0% | |
| CGTTGTTGCATCACGGCCGG+GGG | + | chr8_2:2912071-2912090 | Msa1227600:intron | 65.0% | |
| GCGCCAGAGGAAGGTGAGCA+TGG | - | chr8_2:2913265-2913284 | None:intergenic | 65.0% | |
| AACAATGGCGACGGCGCCAG+AGG | - | chr8_2:2913278-2913297 | None:intergenic | 65.0% | |
| ATGGCGACGGCGCCAGAGGA+AGG | - | chr8_2:2913274-2913293 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 2910121 | 2914703 | 2910121 | ID=Msa1227600;Name=Msa1227600 |
| chr8_2 | mRNA | 2910121 | 2914703 | 2910121 | ID=Msa1227600-mRNA-1;Parent=Msa1227600;Name=Msa1227600-mRNA-1;_AED=0.10;_eAED=0.10;_QI=95|0.8|0.66|1|0.8|0.83|6|597|287 |
| chr8_2 | exon | 2910121 | 2910581 | 2910121 | ID=Msa1227600-mRNA-1:exon:801;Parent=Msa1227600-mRNA-1 |
| chr8_2 | exon | 2911738 | 2911863 | 2911738 | ID=Msa1227600-mRNA-1:exon:802;Parent=Msa1227600-mRNA-1 |
| chr8_2 | exon | 2911940 | 2912058 | 2911940 | ID=Msa1227600-mRNA-1:exon:803;Parent=Msa1227600-mRNA-1 |
| chr8_2 | exon | 2912106 | 2912247 | 2912106 | ID=Msa1227600-mRNA-1:exon:804;Parent=Msa1227600-mRNA-1 |
| chr8_2 | exon | 2912365 | 2912492 | 2912365 | ID=Msa1227600-mRNA-1:exon:805;Parent=Msa1227600-mRNA-1 |
| chr8_2 | exon | 2914124 | 2914703 | 2914124 | ID=Msa1227600-mRNA-1:exon:806;Parent=Msa1227600-mRNA-1 |
| chr8_2 | five_prime_UTR | 2910121 | 2910215 | 2910121 | ID=Msa1227600-mRNA-1:five_prime_utr;Parent=Msa1227600-mRNA-1 |
| chr8_2 | CDS | 2910216 | 2910581 | 2910216 | ID=Msa1227600-mRNA-1:cds;Parent=Msa1227600-mRNA-1 |
| chr8_2 | CDS | 2911738 | 2911863 | 2911738 | ID=Msa1227600-mRNA-1:cds;Parent=Msa1227600-mRNA-1 |
| chr8_2 | CDS | 2911940 | 2912058 | 2911940 | ID=Msa1227600-mRNA-1:cds;Parent=Msa1227600-mRNA-1 |
| chr8_2 | CDS | 2912106 | 2912247 | 2912106 | ID=Msa1227600-mRNA-1:cds;Parent=Msa1227600-mRNA-1 |
| chr8_2 | CDS | 2912365 | 2912475 | 2912365 | ID=Msa1227600-mRNA-1:cds;Parent=Msa1227600-mRNA-1 |
| chr8_2 | three_prime_UTR | 2912476 | 2912492 | 2912476 | ID=Msa1227600-mRNA-1:three_prime_utr;Parent=Msa1227600-mRNA-1 |
| chr8_2 | three_prime_UTR | 2914124 | 2914703 | 2914124 | ID=Msa1227600-mRNA-1:three_prime_utr;Parent=Msa1227600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
