AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1245540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245540 MtrunA17_Chr8g0355121 93.168 322 13 1 1 322 1 313 0.0 592
Msa1245540 MtrunA17_Chr3g0080341 65.325 323 105 4 6 322 1 322 5.18e-148 419
Msa1245540 MtrunA17_Chr7g0254991 48.265 317 136 7 23 322 15 320 3.77e-85 259
Msa1245540 MtrunA17_Chr6g0460301 49.096 332 143 7 6 322 1 321 4.93e-81 248
Msa1245540 MtrunA17_Chr4g0044771 36.023 347 141 12 23 301 17 350 1.75e-47 164
Msa1245540 MtrunA17_Chr5g0440841 56.209 153 60 3 1 150 1 149 1.32e-36 132
Msa1245540 MtrunA17_Chr5g0440841 61.364 88 33 1 235 322 183 269 1.23e-24 100
Msa1245540 MtrunA17_Chr7g0266211 32.948 346 149 8 30 294 45 388 2.78e-34 130
Msa1245540 MtrunA17_Chr2g0321411 35.211 284 127 12 27 294 11 253 2.02e-31 119
Msa1245540 MtrunA17_Chr3g0133971 46.980 149 69 4 1 144 1 144 2.82e-30 119
Msa1245540 MtrunA17_Chr3g0133971 63.768 69 22 1 229 297 333 398 2.54e-17 82.0
Msa1245540 MtrunA17_Chr2g0321381 34.035 285 148 8 26 294 24 284 3.52e-29 113
Msa1245540 MtrunA17_Chr5g0424871 32.013 303 153 12 16 273 4 298 4.03e-23 97.4
Msa1245540 MtrunA17_Chr4g0051101 53.521 71 29 1 238 304 117 187 6.35e-13 66.6
Msa1245540 MtrunA17_Chr5g0405951 61.017 59 11 1 251 297 166 224 2.38e-11 63.2
Msa1245540 MtrunA17_Chr1g0201751 62.745 51 19 0 246 296 157 207 7.82e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245540 AT3G56850.1 54.426 305 112 8 23 322 15 297 9.40e-90 270
Msa1245540 AT2G41070.3 48.173 301 98 8 23 320 15 260 1.25e-72 225
Msa1245540 AT2G41070.1 48.173 301 98 8 23 320 15 260 1.25e-72 225
Msa1245540 AT2G41070.2 48.173 301 98 8 23 320 15 260 1.25e-72 225
Msa1245540 AT2G41070.4 48.173 301 98 8 23 320 24 269 1.79e-72 225
Msa1245540 AT2G41070.5 48.921 278 82 8 23 296 15 236 1.42e-65 207
Msa1245540 AT1G49720.1 35.381 407 163 15 1 322 1 392 6.67e-48 166
Msa1245540 AT1G49720.3 35.381 407 163 15 1 322 1 392 6.67e-48 166
Msa1245540 AT1G49720.2 36.828 372 144 14 1 296 1 357 3.09e-47 164
Msa1245540 AT2G36270.1 32.984 382 142 10 23 297 36 410 1.46e-36 136
Msa1245540 AT2G36270.2 32.984 382 142 10 23 297 36 410 1.46e-36 136
Msa1245540 AT2G36270.3 32.984 382 142 10 23 297 36 410 4.89e-36 135
Msa1245540 AT3G44460.1 39.298 285 127 12 26 294 37 291 3.57e-29 114
Msa1245540 AT3G19290.2 47.143 140 55 3 24 144 34 173 5.94e-26 107
Msa1245540 AT3G19290.4 47.143 140 55 3 24 144 34 173 7.59e-26 106
Msa1245540 AT3G19290.4 59.016 61 22 1 236 296 340 397 1.22e-13 71.6
Msa1245540 AT3G19290.1 47.143 140 55 3 24 144 34 173 9.57e-26 106
Msa1245540 AT3G19290.1 59.016 61 22 1 236 296 340 397 1.89e-13 71.2
Msa1245540 AT3G19290.5 47.143 140 55 3 24 144 34 173 9.57e-26 106
Msa1245540 AT3G19290.5 59.016 61 22 1 236 296 340 397 1.89e-13 71.2
Msa1245540 AT3G19290.3 47.143 140 55 3 24 144 34 173 1.01e-25 106
Msa1245540 AT3G19290.3 59.016 61 22 1 236 296 340 397 1.92e-13 70.9
Msa1245540 AT4G34000.3 39.752 161 57 3 24 144 27 187 2.92e-24 102
Msa1245540 AT4G34000.3 65.079 63 21 1 234 296 357 418 4.91e-16 79.0
Msa1245540 AT4G34000.1 39.752 161 57 3 24 144 27 187 3.57e-24 102
Msa1245540 AT4G34000.1 49.495 99 39 3 234 322 357 454 2.83e-16 79.7
Msa1245540 AT4G34000.4 39.752 161 57 3 24 144 27 187 3.57e-24 102
Msa1245540 AT4G34000.4 49.495 99 39 3 234 322 357 454 2.83e-16 79.7
Msa1245540 AT4G34000.2 39.752 161 57 3 24 144 27 187 3.57e-24 102
Msa1245540 AT4G34000.2 49.495 99 39 3 234 322 357 454 2.83e-16 79.7
Msa1245540 AT5G42910.1 29.032 372 166 16 23 319 19 367 4.77e-23 98.6
Msa1245540 AT1G45249.10 41.912 136 61 3 24 144 21 153 9.94e-22 94.7
Msa1245540 AT1G45249.5 41.912 136 61 3 24 144 21 153 9.94e-22 94.7
Msa1245540 AT1G45249.7 34.921 189 90 5 24 190 36 213 1.85e-21 94.7
Msa1245540 AT1G45249.7 51.515 99 28 3 236 322 341 431 2.55e-18 85.5
Msa1245540 AT1G45249.6 34.921 189 90 5 24 190 36 213 1.85e-21 94.7
Msa1245540 AT1G45249.6 51.515 99 28 3 236 322 341 431 2.55e-18 85.5
Msa1245540 AT1G45249.4 34.921 189 90 5 24 190 21 198 2.01e-21 94.4
Msa1245540 AT1G45249.8 34.921 189 90 5 24 190 21 198 2.01e-21 94.4
Msa1245540 AT1G45249.2 34.921 189 90 5 24 190 21 198 2.01e-21 94.4
Msa1245540 AT1G45249.9 34.921 189 90 5 24 190 21 198 2.01e-21 94.4
Msa1245540 AT1G45249.1 34.921 189 90 5 24 190 21 198 2.14e-21 94.4
Msa1245540 AT1G45249.1 51.515 99 28 3 236 322 326 416 1.76e-18 85.9
Msa1245540 AT1G45249.3 34.921 189 90 5 24 190 21 198 3.00e-21 94.0
Msa1245540 AT1G45249.3 46.364 110 28 4 236 322 326 427 1.32e-15 77.4
Msa1245540 AT5G44080.1 33.047 233 105 10 100 320 120 313 2.22e-17 81.6
Msa1245540 AT4G35900.1 50.000 88 39 3 236 322 202 285 2.81e-17 80.9
Msa1245540 AT2G17770.2 48.276 87 42 2 236 322 112 195 1.32e-13 68.9
Msa1245540 AT1G03970.1 30.846 201 85 6 100 297 85 234 1.48e-11 64.3

Find 92 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACAGTGGTAATTGATAAA+TGG 0.173245 8_2:+35696306 Msa1245540:exon
ATTCGACGTAGCTGATATTT+AGG 0.229724 8_2:-35698138 None:intergenic
GATGACATTGGAGGATTTCT+TGG 0.249290 8_2:+35696711 Msa1245540:CDS
GGCATTGGGCGCACCTCTAA+TGG 0.260601 8_2:+35696981 Msa1245540:CDS
ATCTACAAACCTCTACTTAT+AGG 0.296760 8_2:-35698190 None:intergenic
GATGAAGTTCAAAATCAATT+AGG 0.300260 8_2:+35696430 Msa1245540:CDS
CGAGAGAGACAGACTACTTT+AGG 0.323047 8_2:+35696685 Msa1245540:CDS
AAGGAGTACTCCGGAGGATA+TGG 0.328607 8_2:+35697038 Msa1245540:CDS
CAAAATCAATTAGGTGACTT+AGG 0.335660 8_2:+35696439 Msa1245540:CDS
CGCAGATGCCTGGAAGAAAA+AGG 0.341495 8_2:+35697019 Msa1245540:CDS
AACAGTGGTAATTGATAAAT+GGG 0.344647 8_2:+35696307 Msa1245540:exon
TTTACTTTGTCTCTAGGAAC+AGG 0.370379 8_2:+35696237 None:intergenic
CTGTTTCCGTGCTCTTGAAC+GGG 0.379424 8_2:-35697118 None:intergenic
GGTTTGTAGATATAAGAATC+AGG 0.382447 8_2:+35698202 Msa1245540:three_prime_UTR
GCCTTCATTGTCCGTATTCG+TGG 0.383060 8_2:-35696530 None:intergenic
CAACTTGAGACCCCATTGTC+TGG 0.383672 8_2:-35696333 None:intergenic
TGAGGCTGACACCTGCCTTT+TGG 0.384315 8_2:+35698248 Msa1245540:three_prime_UTR
TCTGACACAGTTCCCATTAG+AGG 0.392785 8_2:-35696994 None:intergenic
ACAGGCTTACACAAATGAAT+TGG 0.394217 8_2:+35697248 Msa1245540:intron
CCGTTCAAGAGCACGGAAAC+AGG 0.394263 8_2:+35697119 Msa1245540:CDS
TCTAGGAACAGGGATCAAAT+TGG 0.411529 8_2:+35696248 None:intergenic
CATTGTCCGTATTCGTGGAC+TGG 0.421785 8_2:-35696525 None:intergenic
AGAAGACTGTGGATGAGGTT+TGG 0.422682 8_2:+35696620 Msa1245540:CDS
TCTACAACGTCAAGCTAGTC+TGG 0.423170 8_2:+35696576 Msa1245540:CDS
TGATATTTAGGTTCGGCAAT+TGG 0.431924 8_2:-35698126 None:intergenic
TCTAGGTTCATACTGCTTAG+TGG 0.432596 8_2:-35696466 None:intergenic
AAAATCAATTAGGTGACTTA+GGG 0.436185 8_2:+35696440 Msa1245540:CDS
TCCGTTTGCAGATAGTCATA+TGG 0.455759 8_2:+35696960 Msa1245540:CDS
TGCAGATAGTCATATGGCAT+TGG 0.456284 8_2:+35696966 Msa1245540:CDS
CAAGTTGGTGGCGATGGTAG+TGG 0.457783 8_2:+35696349 Msa1245540:CDS
AGAAAAGGATGATCAAGAAT+CGG 0.457820 8_2:+35697085 Msa1245540:CDS
GCAGATAGTCATATGGCATT+GGG 0.458700 8_2:+35696967 Msa1245540:CDS
CTGTTGAGAGAAGGCAGAAA+AGG 0.461801 8_2:+35697070 Msa1245540:CDS
GCATTGGGCGCACCTCTAAT+GGG 0.464142 8_2:+35696982 Msa1245540:CDS
CCTGTTTCCGTGCTCTTGAA+CGG 0.468292 8_2:-35697119 None:intergenic
GTGTCAGATACGCAGATGCC+TGG 0.469471 8_2:+35697009 Msa1245540:CDS
AGTATCACAGTTTCTTCCGC+AGG 0.472148 8_2:+35696813 Msa1245540:CDS
TAAATGGGAATCCAGACAAT+GGG 0.473710 8_2:+35696322 Msa1245540:exon
GAGGATTTCTTGGTGAAAGC+AGG 0.483426 8_2:+35696721 Msa1245540:CDS
TTTAGGAGAGATGACATTGG+AGG 0.495208 8_2:+35696702 Msa1245540:CDS
GAATAATAAAACTACAACAT+TGG 0.498720 8_2:-35698328 None:intergenic
TAAAGTTTCACGCCTGGAAG+AGG 0.502778 8_2:+35697275 Msa1245540:CDS
CAGCAAGAAGACTGTGGATG+AGG 0.503492 8_2:+35696615 Msa1245540:CDS
ACGTAGCTGATATTTAGGTT+CGG 0.511389 8_2:-35698133 None:intergenic
GGGTCTCAAGTTGGTGGCGA+TGG 0.515411 8_2:+35696343 Msa1245540:CDS
GCCATATGACTATCTGCAAA+CGG 0.520435 8_2:-35696961 None:intergenic
GAAAAGGATGATCAAGAATC+GGG 0.521274 8_2:+35697086 Msa1245540:CDS
TGTTGTAGATGCTGATATTG+TGG 0.526222 8_2:-35696859 None:intergenic
ATCAGCCGCAGCCGTAGTAT+CGG 0.526511 8_2:-35696779 None:intergenic
AGTGAACCAGTCCACGAATA+CGG 0.529125 8_2:+35696519 Msa1245540:CDS
GCATCTACAACAAAGTTCCA+TGG 0.531471 8_2:+35696870 Msa1245540:CDS
GTCTTCTCCACCATATCCTC+CGG 0.535473 8_2:-35697048 None:intergenic
AGTTTCTTCCGCAGGGTCAG+TGG 0.537083 8_2:+35696821 Msa1245540:CDS
CATATTCCAGAGATACCAAA+AGG 0.538582 8_2:-35698263 None:intergenic
GTTTGTAGATATAAGAATCA+GGG 0.539105 8_2:+35698203 Msa1245540:three_prime_UTR
TGAAATGCTGAGGAAAAGAA+AGG 0.539855 8_2:+35697302 Msa1245540:CDS
CATCTACAACAAAGTTCCAT+GGG 0.551430 8_2:+35696871 Msa1245540:CDS
TTCCAGAGATACCAAAAGGC+AGG 0.552038 8_2:-35698259 None:intergenic
GGGGATTTATATGCCTAGCC+AGG 0.552814 8_2:+35696891 Msa1245540:CDS
GGAGATTAAAGTTTCACGCC+TGG 0.555439 8_2:+35697269 Msa1245540:CDS
AGATGCTGATATTGTGGTTG+CGG 0.557999 8_2:-35696853 None:intergenic
GGCTGTGCTATAACCTGGCT+AGG 0.560978 8_2:-35696904 None:intergenic
CAGACAATGGGGTCTCAAGT+TGG 0.566866 8_2:+35696334 Msa1245540:CDS
TAAAACGAATACCGATACTA+CGG 0.571241 8_2:+35696768 Msa1245540:CDS
TATAGCACAGCCGTTACACA+TGG 0.574412 8_2:+35696915 Msa1245540:CDS
TCCACGAATACGGACAATGA+AGG 0.580287 8_2:+35696529 Msa1245540:CDS
CTGCTGCCCGTTCAAGAGCA+CGG 0.591970 8_2:+35697112 Msa1245540:CDS
TGGAGAAGACTGTTGAGAGA+AGG 0.597925 8_2:+35697061 Msa1245540:CDS
GAGTACTCCGGAGGATATGG+TGG 0.597936 8_2:+35697041 Msa1245540:CDS
TACTTTAGGAGAGATGACAT+TGG 0.608207 8_2:+35696699 Msa1245540:CDS
GCACCTGACCCCATGTGTAA+CGG 0.611183 8_2:-35696925 None:intergenic
TTACTTTGTCTCTAGGAACA+GGG 0.611259 8_2:+35696238 None:intergenic
GTGGCGATGGTAGTGGAAGA+CGG 0.613582 8_2:+35696356 Msa1245540:CDS
GTATCACAGTTTCTTCCGCA+GGG 0.617029 8_2:+35696814 Msa1245540:CDS
ATAAATGGGAATCCAGACAA+TGG 0.617138 8_2:+35696321 Msa1245540:exon
ATCTGTGTACCTATAAGTAG+AGG 0.617878 8_2:+35698181 Msa1245540:three_prime_UTR
TAGGTACACAGATCTCAGAA+TGG 0.634421 8_2:-35698171 None:intergenic
AAGAGGAAAATGAAATGCTG+AGG 0.635284 8_2:+35697292 Msa1245540:CDS
ACAATGGGGTCTCAAGTTGG+TGG 0.636877 8_2:+35696337 Msa1245540:CDS
GAATACCGATACTACGGCTG+CGG 0.642404 8_2:+35696774 Msa1245540:CDS
TACTGTAACCACTGACCCTG+CGG 0.642687 8_2:-35696829 None:intergenic
GCTAGGCATATAAATCCCCA+TGG 0.652039 8_2:-35696887 None:intergenic
TAGCACAGCCGTTACACATG+GGG 0.656286 8_2:+35696917 Msa1245540:CDS
CACAACTCCACTCTCTTGTG+CGG 0.662375 8_2:+35696380 Msa1245540:CDS
ATAGCACAGCCGTTACACAT+GGG 0.668336 8_2:+35696916 Msa1245540:CDS
GGCTGCGGCTGATTCAAATG+TGG 0.674319 8_2:+35696789 Msa1245540:CDS
ATGAAGTGAATTGTTAACAG+TGG 0.684459 8_2:+35696292 Msa1245540:five_prime_UTR
TGCGTTCAGCAAGAAGACTG+TGG 0.706291 8_2:+35696609 Msa1245540:CDS
ATTACTGAAGAACTTAACAG+AGG 0.708305 8_2:-35698300 None:intergenic
AAATGGGAATCCAGACAATG+GGG 0.713303 8_2:+35696323 Msa1245540:exon
ATCTACAACAAAGTTCCATG+GGG 0.739377 8_2:+35696872 Msa1245540:CDS
CCAACAAAAGAAAGACAACG+AGG 0.748926 8_2:+35696651 Msa1245540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATCTGATAATATATAAG+AGG - chr8_2:35698051-35698070 None:intergenic 15.0%
!! ATAATCTGATAATATATAAG+AGG - chr8_2:35698051-35698070 None:intergenic 15.0%
!!! TAAGTTATTATTCAGGTTTA+GGG - chr8_2:35697223-35697242 None:intergenic 20.0%
!!! TTAAGTTATTATTCAGGTTT+AGG - chr8_2:35697224-35697243 None:intergenic 20.0%
!!! GTTTGTTTAAGTTATTATTC+AGG - chr8_2:35697230-35697249 None:intergenic 20.0%
!! GAATAATAACTTAAACAAAC+AGG + chr8_2:35697230-35697249 Msa1245540:intron 20.0%
!! TATAAGAGTTAAAGAGAAAA+AGG - chr8_2:35697568-35697587 None:intergenic 20.0%
!!! TAGTTAGTGGATAATTTATT+AGG + chr8_2:35697666-35697685 Msa1245540:intron 20.0%
!!! ATGTTTGTTTTCTTGATATT+AGG + chr8_2:35697887-35697906 Msa1245540:intron 20.0%
!!! GATAGAGATTTTATATAGTA+TGG - chr8_2:35697940-35697959 None:intergenic 20.0%
!!! ATTTTTACCTGTTAAAATCA+TGG + chr8_2:35697984-35698003 Msa1245540:intron 20.0%
!!! TTTTTACCTGTTAAAATCAT+GGG + chr8_2:35697985-35698004 Msa1245540:intron 20.0%
!!! TAAGTTATTATTCAGGTTTA+GGG - chr8_2:35697223-35697242 None:intergenic 20.0%
!!! TTAAGTTATTATTCAGGTTT+AGG - chr8_2:35697224-35697243 None:intergenic 20.0%
!!! GTTTGTTTAAGTTATTATTC+AGG - chr8_2:35697230-35697249 None:intergenic 20.0%
!! GAATAATAACTTAAACAAAC+AGG + chr8_2:35697230-35697249 Msa1245540:intron 20.0%
!! TATAAGAGTTAAAGAGAAAA+AGG - chr8_2:35697568-35697587 None:intergenic 20.0%
!!! TAGTTAGTGGATAATTTATT+AGG + chr8_2:35697666-35697685 Msa1245540:intron 20.0%
!!! ATGTTTGTTTTCTTGATATT+AGG + chr8_2:35697887-35697906 Msa1245540:intron 20.0%
!!! GATAGAGATTTTATATAGTA+TGG - chr8_2:35697940-35697959 None:intergenic 20.0%
!!! ATTTTTACCTGTTAAAATCA+TGG + chr8_2:35697984-35698003 Msa1245540:intron 20.0%
!!! TTTTTACCTGTTAAAATCAT+GGG + chr8_2:35697985-35698004 Msa1245540:intron 20.0%
! TAACAGTGGTAATTGATAAA+TGG + chr8_2:35696306-35696325 Msa1245540:exon 25.0%
! AACAGTGGTAATTGATAAAT+GGG + chr8_2:35696307-35696326 Msa1245540:exon 25.0%
! GATGAAGTTCAAAATCAATT+AGG + chr8_2:35696430-35696449 Msa1245540:CDS 25.0%
! AAAATCAATTAGGTGACTTA+GGG + chr8_2:35696440-35696459 Msa1245540:CDS 25.0%
! CAAAAACCAACCAAATAATT+AGG - chr8_2:35697188-35697207 None:intergenic 25.0%
! TTATAATTTCAGCACAAGAT+AGG + chr8_2:35697429-35697448 Msa1245540:intron 25.0%
! GTGTTAGATTTGAATGAAAT+AGG + chr8_2:35697595-35697614 Msa1245540:intron 25.0%
! TTTCTTGATATTAGGTGATT+TGG + chr8_2:35697895-35697914 Msa1245540:intron 25.0%
! TAAGTTAGCATGTATAAAAG+AGG - chr8_2:35698020-35698039 None:intergenic 25.0%
! GTTTGTAGATATAAGAATCA+GGG + chr8_2:35698203-35698222 Msa1245540:three_prime_UTR 25.0%
!! TTTTCTTGTAGTTTAATGTG+AGG + chr8_2:35698230-35698249 Msa1245540:three_prime_UTR 25.0%
! TAACAGTGGTAATTGATAAA+TGG + chr8_2:35696306-35696325 Msa1245540:exon 25.0%
! AACAGTGGTAATTGATAAAT+GGG + chr8_2:35696307-35696326 Msa1245540:exon 25.0%
! GATGAAGTTCAAAATCAATT+AGG + chr8_2:35696430-35696449 Msa1245540:CDS 25.0%
! AAAATCAATTAGGTGACTTA+GGG + chr8_2:35696440-35696459 Msa1245540:CDS 25.0%
! CAAAAACCAACCAAATAATT+AGG - chr8_2:35697188-35697207 None:intergenic 25.0%
! TTATAATTTCAGCACAAGAT+AGG + chr8_2:35697429-35697448 Msa1245540:intron 25.0%
! GTGTTAGATTTGAATGAAAT+AGG + chr8_2:35697595-35697614 Msa1245540:intron 25.0%
! TTTCTTGATATTAGGTGATT+TGG + chr8_2:35697895-35697914 Msa1245540:intron 25.0%
! TAAGTTAGCATGTATAAAAG+AGG - chr8_2:35698020-35698039 None:intergenic 25.0%
! GTTTGTAGATATAAGAATCA+GGG + chr8_2:35698203-35698222 Msa1245540:three_prime_UTR 25.0%
!! TTTTCTTGTAGTTTAATGTG+AGG + chr8_2:35698230-35698249 Msa1245540:three_prime_UTR 25.0%
ATGAAGTGAATTGTTAACAG+TGG + chr8_2:35696292-35696311 Msa1245540:five_prime_UTR 30.0%
CAAAATCAATTAGGTGACTT+AGG + chr8_2:35696439-35696458 Msa1245540:CDS 30.0%
TAAAACGAATACCGATACTA+CGG + chr8_2:35696768-35696787 Msa1245540:CDS 30.0%
AGAAAAGGATGATCAAGAAT+CGG + chr8_2:35697085-35697104 Msa1245540:CDS 30.0%
ACTCGTAAGTCCTAATTATT+TGG + chr8_2:35697175-35697194 Msa1245540:intron 30.0%
GTAAGTCCTAATTATTTGGT+TGG + chr8_2:35697179-35697198 Msa1245540:intron 30.0%
ATGTACAAACTACTCAATCT+GGG - chr8_2:35697402-35697421 None:intergenic 30.0%
AATGTACAAACTACTCAATC+TGG - chr8_2:35697403-35697422 None:intergenic 30.0%
! TTGAGTAGTTTGTACATTTG+TGG + chr8_2:35697405-35697424 Msa1245540:intron 30.0%
! ATACAATTCTCTGCATTTTC+TGG + chr8_2:35697475-35697494 Msa1245540:intron 30.0%
!! AATCTTTACTTGGTGTATCA+GGG - chr8_2:35697647-35697666 None:intergenic 30.0%
!! TAATCTTTACTTGGTGTATC+AGG - chr8_2:35697648-35697667 None:intergenic 30.0%
! ACCAAGTAAAGATTAGTTAG+TGG + chr8_2:35697653-35697672 Msa1245540:intron 30.0%
TCCACTAACTAATCTTTACT+TGG - chr8_2:35697657-35697676 None:intergenic 30.0%
TTAACAGGTAAAAATGACCA+TGG - chr8_2:35697979-35697998 None:intergenic 30.0%
!! TTTGTTCCCATGATTTTAAC+AGG - chr8_2:35697994-35698013 None:intergenic 30.0%
ATCTACAAACCTCTACTTAT+AGG - chr8_2:35698193-35698212 None:intergenic 30.0%
GGTTTGTAGATATAAGAATC+AGG + chr8_2:35698202-35698221 Msa1245540:three_prime_UTR 30.0%
ATTACTGAAGAACTTAACAG+AGG - chr8_2:35698303-35698322 None:intergenic 30.0%
AGTAATTATAGCCAATGTTG+AGG + chr8_2:35698317-35698336 Msa1245540:three_prime_UTR 30.0%
ATGAAGTGAATTGTTAACAG+TGG + chr8_2:35696292-35696311 Msa1245540:five_prime_UTR 30.0%
CAAAATCAATTAGGTGACTT+AGG + chr8_2:35696439-35696458 Msa1245540:CDS 30.0%
TAAAACGAATACCGATACTA+CGG + chr8_2:35696768-35696787 Msa1245540:CDS 30.0%
AGAAAAGGATGATCAAGAAT+CGG + chr8_2:35697085-35697104 Msa1245540:CDS 30.0%
ACTCGTAAGTCCTAATTATT+TGG + chr8_2:35697175-35697194 Msa1245540:intron 30.0%
GTAAGTCCTAATTATTTGGT+TGG + chr8_2:35697179-35697198 Msa1245540:intron 30.0%
ATGTACAAACTACTCAATCT+GGG - chr8_2:35697402-35697421 None:intergenic 30.0%
AATGTACAAACTACTCAATC+TGG - chr8_2:35697403-35697422 None:intergenic 30.0%
! TTGAGTAGTTTGTACATTTG+TGG + chr8_2:35697405-35697424 Msa1245540:intron 30.0%
! ATACAATTCTCTGCATTTTC+TGG + chr8_2:35697475-35697494 Msa1245540:intron 30.0%
!! AATCTTTACTTGGTGTATCA+GGG - chr8_2:35697647-35697666 None:intergenic 30.0%
!! TAATCTTTACTTGGTGTATC+AGG - chr8_2:35697648-35697667 None:intergenic 30.0%
! ACCAAGTAAAGATTAGTTAG+TGG + chr8_2:35697653-35697672 Msa1245540:intron 30.0%
TCCACTAACTAATCTTTACT+TGG - chr8_2:35697657-35697676 None:intergenic 30.0%
TTAACAGGTAAAAATGACCA+TGG - chr8_2:35697979-35697998 None:intergenic 30.0%
!! TTTGTTCCCATGATTTTAAC+AGG - chr8_2:35697994-35698013 None:intergenic 30.0%
ATCTACAAACCTCTACTTAT+AGG - chr8_2:35698193-35698212 None:intergenic 30.0%
GGTTTGTAGATATAAGAATC+AGG + chr8_2:35698202-35698221 Msa1245540:three_prime_UTR 30.0%
ATTACTGAAGAACTTAACAG+AGG - chr8_2:35698303-35698322 None:intergenic 30.0%
ATAAATGGGAATCCAGACAA+TGG + chr8_2:35696321-35696340 Msa1245540:exon 35.0%
TAAATGGGAATCCAGACAAT+GGG + chr8_2:35696322-35696341 Msa1245540:exon 35.0%
! ACGAGCTTCTGAAAAATGTA+TGG + chr8_2:35696488-35696507 Msa1245540:CDS 35.0%
! TACTTTAGGAGAGATGACAT+TGG + chr8_2:35696699-35696718 Msa1245540:CDS 35.0%
TGTTGTAGATGCTGATATTG+TGG - chr8_2:35696862-35696881 None:intergenic 35.0%
CATCTACAACAAAGTTCCAT+GGG + chr8_2:35696871-35696890 Msa1245540:CDS 35.0%
ATCTACAACAAAGTTCCATG+GGG + chr8_2:35696872-35696891 Msa1245540:CDS 35.0%
GAAAAGGATGATCAAGAATC+GGG + chr8_2:35697086-35697105 Msa1245540:CDS 35.0%
ACAGGCTTACACAAATGAAT+TGG + chr8_2:35697248-35697267 Msa1245540:intron 35.0%
AAGAGGAAAATGAAATGCTG+AGG + chr8_2:35697292-35697311 Msa1245540:CDS 35.0%
TGAAATGCTGAGGAAAAGAA+AGG + chr8_2:35697302-35697321 Msa1245540:CDS 35.0%
TGTACAAACTACTCAATCTG+GGG - chr8_2:35697401-35697420 None:intergenic 35.0%
! TCTCTGCATTTTCTGGATTA+AGG + chr8_2:35697482-35697501 Msa1245540:intron 35.0%
!!! GTTAGTTCTGACACAACTTT+TGG + chr8_2:35697804-35697823 Msa1245540:intron 35.0%
! TTAGGTGATTTGGAAGATCT+TGG + chr8_2:35697905-35697924 Msa1245540:intron 35.0%
CTATATGCACATTGTATCCA+TGG + chr8_2:35697959-35697978 Msa1245540:intron 35.0%
AATATTTGTCCTCAACATGC+AGG + chr8_2:35698077-35698096 Msa1245540:intron 35.0%
! TGATATTTAGGTTCGGCAAT+TGG - chr8_2:35698129-35698148 None:intergenic 35.0%
! ACGTAGCTGATATTTAGGTT+CGG - chr8_2:35698136-35698155 None:intergenic 35.0%
ATTCGACGTAGCTGATATTT+AGG - chr8_2:35698141-35698160 None:intergenic 35.0%
ATCTGTGTACCTATAAGTAG+AGG + chr8_2:35698181-35698200 Msa1245540:three_prime_UTR 35.0%
CATATTCCAGAGATACCAAA+AGG - chr8_2:35698266-35698285 None:intergenic 35.0%
ATAAATGGGAATCCAGACAA+TGG + chr8_2:35696321-35696340 Msa1245540:exon 35.0%
TAAATGGGAATCCAGACAAT+GGG + chr8_2:35696322-35696341 Msa1245540:exon 35.0%
! ACGAGCTTCTGAAAAATGTA+TGG + chr8_2:35696488-35696507 Msa1245540:CDS 35.0%
! TACTTTAGGAGAGATGACAT+TGG + chr8_2:35696699-35696718 Msa1245540:CDS 35.0%
TGTTGTAGATGCTGATATTG+TGG - chr8_2:35696862-35696881 None:intergenic 35.0%
CATCTACAACAAAGTTCCAT+GGG + chr8_2:35696871-35696890 Msa1245540:CDS 35.0%
ATCTACAACAAAGTTCCATG+GGG + chr8_2:35696872-35696891 Msa1245540:CDS 35.0%
GAAAAGGATGATCAAGAATC+GGG + chr8_2:35697086-35697105 Msa1245540:CDS 35.0%
ACAGGCTTACACAAATGAAT+TGG + chr8_2:35697248-35697267 Msa1245540:intron 35.0%
AAGAGGAAAATGAAATGCTG+AGG + chr8_2:35697292-35697311 Msa1245540:CDS 35.0%
TGAAATGCTGAGGAAAAGAA+AGG + chr8_2:35697302-35697321 Msa1245540:CDS 35.0%
TGTACAAACTACTCAATCTG+GGG - chr8_2:35697401-35697420 None:intergenic 35.0%
! TCTCTGCATTTTCTGGATTA+AGG + chr8_2:35697482-35697501 Msa1245540:intron 35.0%
!!! GTTAGTTCTGACACAACTTT+TGG + chr8_2:35697804-35697823 Msa1245540:intron 35.0%
! TTAGGTGATTTGGAAGATCT+TGG + chr8_2:35697905-35697924 Msa1245540:intron 35.0%
CTATATGCACATTGTATCCA+TGG + chr8_2:35697959-35697978 Msa1245540:intron 35.0%
AATATTTGTCCTCAACATGC+AGG + chr8_2:35698077-35698096 Msa1245540:intron 35.0%
! TGATATTTAGGTTCGGCAAT+TGG - chr8_2:35698129-35698148 None:intergenic 35.0%
! ACGTAGCTGATATTTAGGTT+CGG - chr8_2:35698136-35698155 None:intergenic 35.0%
ATTCGACGTAGCTGATATTT+AGG - chr8_2:35698141-35698160 None:intergenic 35.0%
ATCTGTGTACCTATAAGTAG+AGG + chr8_2:35698181-35698200 Msa1245540:three_prime_UTR 35.0%
CATATTCCAGAGATACCAAA+AGG - chr8_2:35698266-35698285 None:intergenic 35.0%
AAATGGGAATCCAGACAATG+GGG + chr8_2:35696323-35696342 Msa1245540:exon 40.0%
TCTAGGTTCATACTGCTTAG+TGG - chr8_2:35696469-35696488 None:intergenic 40.0%
!! CATTTTTCAGAAGCTCGTCT+AGG - chr8_2:35696486-35696505 None:intergenic 40.0%
! CCTCGTTGTCTTTCTTTTGT+TGG - chr8_2:35696654-35696673 None:intergenic 40.0%
CCAACAAAAGAAAGACAACG+AGG + chr8_2:35696651-35696670 Msa1245540:CDS 40.0%
TTTAGGAGAGATGACATTGG+AGG + chr8_2:35696702-35696721 Msa1245540:CDS 40.0%
GATGACATTGGAGGATTTCT+TGG + chr8_2:35696711-35696730 Msa1245540:CDS 40.0%
AGATGCTGATATTGTGGTTG+CGG - chr8_2:35696856-35696875 None:intergenic 40.0%
GCATCTACAACAAAGTTCCA+TGG + chr8_2:35696870-35696889 Msa1245540:CDS 40.0%
TCCGTTTGCAGATAGTCATA+TGG + chr8_2:35696960-35696979 Msa1245540:CDS 40.0%
GCCATATGACTATCTGCAAA+CGG - chr8_2:35696964-35696983 None:intergenic 40.0%
TGCAGATAGTCATATGGCAT+TGG + chr8_2:35696966-35696985 Msa1245540:CDS 40.0%
GCAGATAGTCATATGGCATT+GGG + chr8_2:35696967-35696986 Msa1245540:CDS 40.0%
!! TGGAAGAAAAAGGAGTACTC+CGG + chr8_2:35697029-35697048 Msa1245540:CDS 40.0%
! GCATTTCATTTTCCTCTTCC+AGG - chr8_2:35697290-35697309 None:intergenic 40.0%
TCTGGGGAATGAAAGGAATT+AGG - chr8_2:35697385-35697404 None:intergenic 40.0%
TACTCAATCTGGGGAATGAA+AGG - chr8_2:35697392-35697411 None:intergenic 40.0%
AATGCAAATGACACATGCTC+AGG - chr8_2:35697539-35697558 None:intergenic 40.0%
TTGGTGTATCAGGGATATCA+GGG - chr8_2:35697638-35697657 None:intergenic 40.0%
TTACGTAAACGATGCAGCAT+AGG - chr8_2:35697709-35697728 None:intergenic 40.0%
TAGGTACACAGATCTCAGAA+TGG - chr8_2:35698174-35698193 None:intergenic 40.0%
AAATGGGAATCCAGACAATG+GGG + chr8_2:35696323-35696342 Msa1245540:exon 40.0%
TCTAGGTTCATACTGCTTAG+TGG - chr8_2:35696469-35696488 None:intergenic 40.0%
!! CATTTTTCAGAAGCTCGTCT+AGG - chr8_2:35696486-35696505 None:intergenic 40.0%
! CCTCGTTGTCTTTCTTTTGT+TGG - chr8_2:35696654-35696673 None:intergenic 40.0%
CCAACAAAAGAAAGACAACG+AGG + chr8_2:35696651-35696670 Msa1245540:CDS 40.0%
TTTAGGAGAGATGACATTGG+AGG + chr8_2:35696702-35696721 Msa1245540:CDS 40.0%
GATGACATTGGAGGATTTCT+TGG + chr8_2:35696711-35696730 Msa1245540:CDS 40.0%
AGATGCTGATATTGTGGTTG+CGG - chr8_2:35696856-35696875 None:intergenic 40.0%
GCATCTACAACAAAGTTCCA+TGG + chr8_2:35696870-35696889 Msa1245540:CDS 40.0%
TCCGTTTGCAGATAGTCATA+TGG + chr8_2:35696960-35696979 Msa1245540:CDS 40.0%
GCCATATGACTATCTGCAAA+CGG - chr8_2:35696964-35696983 None:intergenic 40.0%
TGCAGATAGTCATATGGCAT+TGG + chr8_2:35696966-35696985 Msa1245540:CDS 40.0%
GCAGATAGTCATATGGCATT+GGG + chr8_2:35696967-35696986 Msa1245540:CDS 40.0%
!! TGGAAGAAAAAGGAGTACTC+CGG + chr8_2:35697029-35697048 Msa1245540:CDS 40.0%
! GCATTTCATTTTCCTCTTCC+AGG - chr8_2:35697290-35697309 None:intergenic 40.0%
TCTGGGGAATGAAAGGAATT+AGG - chr8_2:35697385-35697404 None:intergenic 40.0%
TACTCAATCTGGGGAATGAA+AGG - chr8_2:35697392-35697411 None:intergenic 40.0%
AATGCAAATGACACATGCTC+AGG - chr8_2:35697539-35697558 None:intergenic 40.0%
TTGGTGTATCAGGGATATCA+GGG - chr8_2:35697638-35697657 None:intergenic 40.0%
TTACGTAAACGATGCAGCAT+AGG - chr8_2:35697709-35697728 None:intergenic 40.0%
TAGGTACACAGATCTCAGAA+TGG - chr8_2:35698174-35698193 None:intergenic 40.0%
! AATTTTGCCGCACAAGAGAG+TGG - chr8_2:35696390-35696409 None:intergenic 45.0%
AGTGAACCAGTCCACGAATA+CGG + chr8_2:35696519-35696538 Msa1245540:CDS 45.0%
TCCACGAATACGGACAATGA+AGG + chr8_2:35696529-35696548 Msa1245540:CDS 45.0%
TCTACAACGTCAAGCTAGTC+TGG + chr8_2:35696576-35696595 Msa1245540:CDS 45.0%
AGAAGACTGTGGATGAGGTT+TGG + chr8_2:35696620-35696639 Msa1245540:CDS 45.0%
CGAGAGAGACAGACTACTTT+AGG + chr8_2:35696685-35696704 Msa1245540:CDS 45.0%
GAGGATTTCTTGGTGAAAGC+AGG + chr8_2:35696721-35696740 Msa1245540:CDS 45.0%
AGTATCACAGTTTCTTCCGC+AGG + chr8_2:35696813-35696832 Msa1245540:CDS 45.0%
GTATCACAGTTTCTTCCGCA+GGG + chr8_2:35696814-35696833 Msa1245540:CDS 45.0%
GCTAGGCATATAAATCCCCA+TGG - chr8_2:35696890-35696909 None:intergenic 45.0%
TATAGCACAGCCGTTACACA+TGG + chr8_2:35696915-35696934 Msa1245540:CDS 45.0%
ATAGCACAGCCGTTACACAT+GGG + chr8_2:35696916-35696935 Msa1245540:CDS 45.0%
TCTGACACAGTTCCCATTAG+AGG - chr8_2:35696997-35697016 None:intergenic 45.0%
!! GGAGTACTCCTTTTTCTTCC+AGG - chr8_2:35697030-35697049 None:intergenic 45.0%
!! AAGAAAAAGGAGTACTCCGG+AGG + chr8_2:35697032-35697051 Msa1245540:CDS 45.0%
TGGAGAAGACTGTTGAGAGA+AGG + chr8_2:35697061-35697080 Msa1245540:CDS 45.0%
CTGTTGAGAGAAGGCAGAAA+AGG + chr8_2:35697070-35697089 Msa1245540:CDS 45.0%
GGAGATTAAAGTTTCACGCC+TGG + chr8_2:35697269-35697288 Msa1245540:CDS 45.0%
TAAAGTTTCACGCCTGGAAG+AGG + chr8_2:35697275-35697294 Msa1245540:CDS 45.0%
AGGGATATCAGGGTGATCAA+TGG - chr8_2:35697628-35697647 None:intergenic 45.0%
! CTTGGTGTATCAGGGATATC+AGG - chr8_2:35697639-35697658 None:intergenic 45.0%
TTCCAGAGATACCAAAAGGC+AGG - chr8_2:35698262-35698281 None:intergenic 45.0%
! AATTTTGCCGCACAAGAGAG+TGG - chr8_2:35696390-35696409 None:intergenic 45.0%
AGTGAACCAGTCCACGAATA+CGG + chr8_2:35696519-35696538 Msa1245540:CDS 45.0%
TCCACGAATACGGACAATGA+AGG + chr8_2:35696529-35696548 Msa1245540:CDS 45.0%
TCTACAACGTCAAGCTAGTC+TGG + chr8_2:35696576-35696595 Msa1245540:CDS 45.0%
AGAAGACTGTGGATGAGGTT+TGG + chr8_2:35696620-35696639 Msa1245540:CDS 45.0%
CGAGAGAGACAGACTACTTT+AGG + chr8_2:35696685-35696704 Msa1245540:CDS 45.0%
GAGGATTTCTTGGTGAAAGC+AGG + chr8_2:35696721-35696740 Msa1245540:CDS 45.0%
AGTATCACAGTTTCTTCCGC+AGG + chr8_2:35696813-35696832 Msa1245540:CDS 45.0%
GTATCACAGTTTCTTCCGCA+GGG + chr8_2:35696814-35696833 Msa1245540:CDS 45.0%
GCTAGGCATATAAATCCCCA+TGG - chr8_2:35696890-35696909 None:intergenic 45.0%
TATAGCACAGCCGTTACACA+TGG + chr8_2:35696915-35696934 Msa1245540:CDS 45.0%
ATAGCACAGCCGTTACACAT+GGG + chr8_2:35696916-35696935 Msa1245540:CDS 45.0%
TCTGACACAGTTCCCATTAG+AGG - chr8_2:35696997-35697016 None:intergenic 45.0%
!! GGAGTACTCCTTTTTCTTCC+AGG - chr8_2:35697030-35697049 None:intergenic 45.0%
!! AAGAAAAAGGAGTACTCCGG+AGG + chr8_2:35697032-35697051 Msa1245540:CDS 45.0%
TGGAGAAGACTGTTGAGAGA+AGG + chr8_2:35697061-35697080 Msa1245540:CDS 45.0%
CTGTTGAGAGAAGGCAGAAA+AGG + chr8_2:35697070-35697089 Msa1245540:CDS 45.0%
GGAGATTAAAGTTTCACGCC+TGG + chr8_2:35697269-35697288 Msa1245540:CDS 45.0%
TAAAGTTTCACGCCTGGAAG+AGG + chr8_2:35697275-35697294 Msa1245540:CDS 45.0%
AGGGATATCAGGGTGATCAA+TGG - chr8_2:35697628-35697647 None:intergenic 45.0%
! CTTGGTGTATCAGGGATATC+AGG - chr8_2:35697639-35697658 None:intergenic 45.0%
TTCCAGAGATACCAAAAGGC+AGG - chr8_2:35698262-35698281 None:intergenic 45.0%
CAACTTGAGACCCCATTGTC+TGG - chr8_2:35696336-35696355 None:intergenic 50.0%
CAGACAATGGGGTCTCAAGT+TGG + chr8_2:35696334-35696353 Msa1245540:CDS 50.0%
!! ACAATGGGGTCTCAAGTTGG+TGG + chr8_2:35696337-35696356 Msa1245540:CDS 50.0%
CACAACTCCACTCTCTTGTG+CGG + chr8_2:35696380-35696399 Msa1245540:CDS 50.0%
CATTGTCCGTATTCGTGGAC+TGG - chr8_2:35696528-35696547 None:intergenic 50.0%
GCCTTCATTGTCCGTATTCG+TGG - chr8_2:35696533-35696552 None:intergenic 50.0%
TGCGTTCAGCAAGAAGACTG+TGG + chr8_2:35696609-35696628 Msa1245540:CDS 50.0%
CAGCAAGAAGACTGTGGATG+AGG + chr8_2:35696615-35696634 Msa1245540:CDS 50.0%
GAATACCGATACTACGGCTG+CGG + chr8_2:35696774-35696793 Msa1245540:CDS 50.0%
TACTGTAACCACTGACCCTG+CGG - chr8_2:35696832-35696851 None:intergenic 50.0%
GGGGATTTATATGCCTAGCC+AGG + chr8_2:35696891-35696910 Msa1245540:CDS 50.0%
GTAACGGCTGTGCTATAACC+TGG - chr8_2:35696912-35696931 None:intergenic 50.0%
TAGCACAGCCGTTACACATG+GGG + chr8_2:35696917-35696936 Msa1245540:CDS 50.0%
CGCAGATGCCTGGAAGAAAA+AGG + chr8_2:35697019-35697038 Msa1245540:CDS 50.0%
!! AAGGAGTACTCCGGAGGATA+TGG + chr8_2:35697038-35697057 Msa1245540:CDS 50.0%
GTCTTCTCCACCATATCCTC+CGG - chr8_2:35697051-35697070 None:intergenic 50.0%
CTGTTTCCGTGCTCTTGAAC+GGG - chr8_2:35697121-35697140 None:intergenic 50.0%
CCTGTTTCCGTGCTCTTGAA+CGG - chr8_2:35697122-35697141 None:intergenic 50.0%
! TCTCTAGCTCCTGCATGTTG+AGG - chr8_2:35698089-35698108 None:intergenic 50.0%
! CACCTGCCTTTTGGTATCTC+TGG + chr8_2:35698257-35698276 Msa1245540:three_prime_UTR 50.0%
CAACTTGAGACCCCATTGTC+TGG - chr8_2:35696336-35696355 None:intergenic 50.0%
CAGACAATGGGGTCTCAAGT+TGG + chr8_2:35696334-35696353 Msa1245540:CDS 50.0%
!! ACAATGGGGTCTCAAGTTGG+TGG + chr8_2:35696337-35696356 Msa1245540:CDS 50.0%
CACAACTCCACTCTCTTGTG+CGG + chr8_2:35696380-35696399 Msa1245540:CDS 50.0%
CATTGTCCGTATTCGTGGAC+TGG - chr8_2:35696528-35696547 None:intergenic 50.0%
GCCTTCATTGTCCGTATTCG+TGG - chr8_2:35696533-35696552 None:intergenic 50.0%
TGCGTTCAGCAAGAAGACTG+TGG + chr8_2:35696609-35696628 Msa1245540:CDS 50.0%
CAGCAAGAAGACTGTGGATG+AGG + chr8_2:35696615-35696634 Msa1245540:CDS 50.0%
GAATACCGATACTACGGCTG+CGG + chr8_2:35696774-35696793 Msa1245540:CDS 50.0%
TACTGTAACCACTGACCCTG+CGG - chr8_2:35696832-35696851 None:intergenic 50.0%
GGGGATTTATATGCCTAGCC+AGG + chr8_2:35696891-35696910 Msa1245540:CDS 50.0%
GTAACGGCTGTGCTATAACC+TGG - chr8_2:35696912-35696931 None:intergenic 50.0%
TAGCACAGCCGTTACACATG+GGG + chr8_2:35696917-35696936 Msa1245540:CDS 50.0%
CGCAGATGCCTGGAAGAAAA+AGG + chr8_2:35697019-35697038 Msa1245540:CDS 50.0%
!! AAGGAGTACTCCGGAGGATA+TGG + chr8_2:35697038-35697057 Msa1245540:CDS 50.0%
GTCTTCTCCACCATATCCTC+CGG - chr8_2:35697051-35697070 None:intergenic 50.0%
CTGTTTCCGTGCTCTTGAAC+GGG - chr8_2:35697121-35697140 None:intergenic 50.0%
CCTGTTTCCGTGCTCTTGAA+CGG - chr8_2:35697122-35697141 None:intergenic 50.0%
! TCTCTAGCTCCTGCATGTTG+AGG - chr8_2:35698089-35698108 None:intergenic 50.0%
! CACCTGCCTTTTGGTATCTC+TGG + chr8_2:35698257-35698276 Msa1245540:three_prime_UTR 50.0%
!! CAAGTTGGTGGCGATGGTAG+TGG + chr8_2:35696349-35696368 Msa1245540:CDS 55.0%
!! GTGGCGATGGTAGTGGAAGA+CGG + chr8_2:35696356-35696375 Msa1245540:CDS 55.0%
ATCAGCCGCAGCCGTAGTAT+CGG - chr8_2:35696782-35696801 None:intergenic 55.0%
! GGCTGCGGCTGATTCAAATG+TGG + chr8_2:35696789-35696808 Msa1245540:CDS 55.0%
AGTTTCTTCCGCAGGGTCAG+TGG + chr8_2:35696821-35696840 Msa1245540:CDS 55.0%
GGCTGTGCTATAACCTGGCT+AGG - chr8_2:35696907-35696926 None:intergenic 55.0%
GCACCTGACCCCATGTGTAA+CGG - chr8_2:35696928-35696947 None:intergenic 55.0%
GCATTGGGCGCACCTCTAAT+GGG + chr8_2:35696982-35697001 Msa1245540:CDS 55.0%
GTGTCAGATACGCAGATGCC+TGG + chr8_2:35697009-35697028 Msa1245540:CDS 55.0%
GAGTACTCCGGAGGATATGG+TGG + chr8_2:35697041-35697060 Msa1245540:CDS 55.0%
! CCGTTCAAGAGCACGGAAAC+AGG + chr8_2:35697119-35697138 Msa1245540:CDS 55.0%
! TGAGGCTGACACCTGCCTTT+TGG + chr8_2:35698248-35698267 Msa1245540:three_prime_UTR 55.0%
!! CAAGTTGGTGGCGATGGTAG+TGG + chr8_2:35696349-35696368 Msa1245540:CDS 55.0%
!! GTGGCGATGGTAGTGGAAGA+CGG + chr8_2:35696356-35696375 Msa1245540:CDS 55.0%
ATCAGCCGCAGCCGTAGTAT+CGG - chr8_2:35696782-35696801 None:intergenic 55.0%
! GGCTGCGGCTGATTCAAATG+TGG + chr8_2:35696789-35696808 Msa1245540:CDS 55.0%
AGTTTCTTCCGCAGGGTCAG+TGG + chr8_2:35696821-35696840 Msa1245540:CDS 55.0%
GGCTGTGCTATAACCTGGCT+AGG - chr8_2:35696907-35696926 None:intergenic 55.0%
GCACCTGACCCCATGTGTAA+CGG - chr8_2:35696928-35696947 None:intergenic 55.0%
GCATTGGGCGCACCTCTAAT+GGG + chr8_2:35696982-35697001 Msa1245540:CDS 55.0%
GTGTCAGATACGCAGATGCC+TGG + chr8_2:35697009-35697028 Msa1245540:CDS 55.0%
GAGTACTCCGGAGGATATGG+TGG + chr8_2:35697041-35697060 Msa1245540:CDS 55.0%
! CCGTTCAAGAGCACGGAAAC+AGG + chr8_2:35697119-35697138 Msa1245540:CDS 55.0%
! TGAGGCTGACACCTGCCTTT+TGG + chr8_2:35698248-35698267 Msa1245540:three_prime_UTR 55.0%
!! GGGTCTCAAGTTGGTGGCGA+TGG + chr8_2:35696343-35696362 Msa1245540:CDS 60.0%
CAGCCGTTACACATGGGGTC+AGG + chr8_2:35696922-35696941 Msa1245540:CDS 60.0%
CATGGGGTCAGGTGCTTCGA+TGG + chr8_2:35696933-35696952 Msa1245540:CDS 60.0%
! GGCATTGGGCGCACCTCTAA+TGG + chr8_2:35696981-35697000 Msa1245540:CDS 60.0%
CTGCTGCCCGTTCAAGAGCA+CGG + chr8_2:35697112-35697131 Msa1245540:CDS 60.0%
!! GGGTCTCAAGTTGGTGGCGA+TGG + chr8_2:35696343-35696362 Msa1245540:CDS 60.0%
CAGCCGTTACACATGGGGTC+AGG + chr8_2:35696922-35696941 Msa1245540:CDS 60.0%
CATGGGGTCAGGTGCTTCGA+TGG + chr8_2:35696933-35696952 Msa1245540:CDS 60.0%
! GGCATTGGGCGCACCTCTAA+TGG + chr8_2:35696981-35697000 Msa1245540:CDS 60.0%
CTGCTGCCCGTTCAAGAGCA+CGG + chr8_2:35697112-35697131 Msa1245540:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 35696251 35698336 35696251 ID=Msa1245540;Name=Msa1245540
chr8_2 mRNA 35696251 35698336 35696251 ID=Msa1245540-mRNA-1;Parent=Msa1245540;Name=Msa1245540-mRNA-1;_AED=0.04;_eAED=0.04;_QI=74|1|1|1|1|1|3|157|322
chr8_2 exon 35696251 35697140 35696251 ID=Msa1245540-mRNA-1:exon:11313;Parent=Msa1245540-mRNA-1
chr8_2 exon 35697252 35697323 35697252 ID=Msa1245540-mRNA-1:exon:11314;Parent=Msa1245540-mRNA-1
chr8_2 exon 35698099 35698336 35698099 ID=Msa1245540-mRNA-1:exon:11315;Parent=Msa1245540-mRNA-1
chr8_2 five_prime_UTR 35696251 35696324 35696251 ID=Msa1245540-mRNA-1:five_prime_utr;Parent=Msa1245540-mRNA-1
chr8_2 CDS 35696325 35697140 35696325 ID=Msa1245540-mRNA-1:cds;Parent=Msa1245540-mRNA-1
chr8_2 CDS 35697252 35697323 35697252 ID=Msa1245540-mRNA-1:cds;Parent=Msa1245540-mRNA-1
chr8_2 CDS 35698099 35698179 35698099 ID=Msa1245540-mRNA-1:cds;Parent=Msa1245540-mRNA-1
chr8_2 three_prime_UTR 35698180 35698336 35698180 ID=Msa1245540-mRNA-1:three_prime_utr;Parent=Msa1245540-mRNA-1
Gene Sequence

>Msa1245540

ATGGGAATCCAGACAATGGGGTCTCAAGTTGGTGGCGATGGTAGTGGAAGACGGTCACAACTCCACTCTCTTGTGCGGCAAAATTCAGTGTACAGTCTCACACTTGATGAAGTTCAAAATCAATTAGGTGACTTAGGGAAGCCACTAAGCAGTATGAACCTAGACGAGCTTCTGAAAAATGTATGGACTGTTGAAGTGAACCAGTCCACGAATACGGACAATGAAGGCACAACACAGTCTAGTGAAGCTTCTCTACAACGTCAAGCTAGTCTGGCACTAAAAGCTGCGTTCAGCAAGAAGACTGTGGATGAGGTTTGGAGAGATATCCAACAAAAGAAAGACAACGAGGAAAAGAAGTCACGAGAGAGACAGACTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCTAATAAAACGAATACCGATACTACGGCTGCGGCTGATTCAAATGTGGCAGTATCACAGTTTCTTCCGCAGGGTCAGTGGTTACAGTATCCGCAACCACAATATCAGCATCTACAACAAAGTTCCATGGGGATTTATATGCCTAGCCAGGTTATAGCACAGCCGTTACACATGGGGTCAGGTGCTTCGATGGAGATTCCGTTTGCAGATAGTCATATGGCATTGGGCGCACCTCTAATGGGAACTGTGTCAGATACGCAGATGCCTGGAAGAAAAAGGAGTACTCCGGAGGATATGGTGGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCACGGAAACAGGCTTACACAAATGAATTGGAGATTAAAGTTTCACGCCTGGAAGAGGAAAATGAAATGCTGAGGAAAAGAAAGGAGCTAGAGAATATGTTGCTATGTACTCCAATTGCCGAACCTAAATATCAGCTACGTCGAATAGCATCTTGTCCATTCTGA
Protein sequence

>Msa1245540

MGIQTMGSQVGGDGSGRRSQLHSLVRQNSVYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTNTDNEGTTQSSEASLQRQASLALKAAFSKKTVDEVWRDIQQKKDNEEKKSRERQTTLGEMTLEDFLVKAGIVAEASSNKTNTDTTAAADSNVAVSQFLPQGQWLQYPQPQYQHLQQSSMGIYMPSQVIAQPLHMGSGASMEIPFADSHMALGAPLMGTVSDTQMPGRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRKELENMLLCTPIAEPKYQLRRIASCPF*