Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0675410 | PNX78693.1 | 86.087 | 115 | 12 | 1 | 28 | 138 | 202 | 316 | 1.14e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0675410 | A0A2K3LVJ8 | 86.087 | 115 | 12 | 1 | 28 | 138 | 202 | 316 | 5.47e-37 | 137 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0675410 | 0.815159 | 1.066203e-51 | -8.615850e-47 |
| Msa0011170 | Msa0675410 | 0.805795 | 1.123288e-49 | -8.615850e-47 |
| Msa0011960 | Msa0675410 | 0.819206 | 1.311871e-52 | -8.615850e-47 |
| Msa0013050 | Msa0675410 | -0.828088 | 1.092062e-54 | -8.615850e-47 |
| Msa0023000 | Msa0675410 | 0.800518 | 1.388254e-48 | -8.615850e-47 |
| Msa0025730 | Msa0675410 | 0.805873 | 1.081826e-49 | -8.615850e-47 |
| Msa0027260 | Msa0675410 | 0.800710 | 1.268299e-48 | -8.615850e-47 |
| Msa0028660 | Msa0675410 | 0.828855 | 7.129097e-55 | -8.615850e-47 |
| Msa0029270 | Msa0675410 | 0.806519 | 7.907017e-50 | -8.615850e-47 |
| Msa0032090 | Msa0675410 | 0.823536 | 1.313876e-53 | -8.615850e-47 |
| Msa0032430 | Msa0675410 | 0.817108 | 3.912913e-52 | -8.615850e-47 |
| Msa0032580 | Msa0675410 | 0.846994 | 1.531087e-59 | -8.615850e-47 |
| Msa0033110 | Msa0675410 | 0.855547 | 5.865584e-62 | -8.615850e-47 |
| Msa0033260 | Msa0675410 | 0.854469 | 1.205432e-61 | -8.615850e-47 |
| Msa0037540 | Msa0675410 | -0.821190 | 4.605948e-53 | -8.615850e-47 |
| Msa0037570 | Msa0675410 | -0.806677 | 7.323036e-50 | -8.615850e-47 |
| Msa0037590 | Msa0675410 | -0.815080 | 1.110170e-51 | -8.615850e-47 |
| Msa0040690 | Msa0675410 | 0.824467 | 7.944156e-54 | -8.615850e-47 |
| Msa0043660 | Msa0675410 | 0.800657 | 1.300271e-48 | -8.615850e-47 |
| Msa0044540 | Msa0675410 | -0.805670 | 1.193229e-49 | -8.615850e-47 |
| Msa0052770 | Msa0675410 | 0.819680 | 1.022869e-52 | -8.615850e-47 |
| Msa0054750 | Msa0675410 | 0.815479 | 9.051200e-52 | -8.615850e-47 |
| Msa0055180 | Msa0675410 | 0.822643 | 2.122368e-53 | -8.615850e-47 |
| Msa0058300 | Msa0675410 | 0.835967 | 1.232678e-56 | -8.615850e-47 |
| Msa0075960 | Msa0675410 | 0.809324 | 2.002191e-50 | -8.615850e-47 |
| Msa0076320 | Msa0675410 | 0.832964 | 6.999852e-56 | -8.615850e-47 |
| Msa0079380 | Msa0675410 | 0.810200 | 1.297578e-50 | -8.615850e-47 |
| Msa0084380 | Msa0675410 | 0.808805 | 2.585466e-50 | -8.615850e-47 |
| Msa0090360 | Msa0675410 | 0.802293 | 6.008124e-49 | -8.615850e-47 |
| Msa0091410 | Msa0675410 | 0.857995 | 1.115780e-62 | -8.615850e-47 |
| Msa0094470 | Msa0675410 | 0.804275 | 2.336082e-49 | -8.615850e-47 |
| Msa0096030 | Msa0675410 | 0.802181 | 6.336165e-49 | -8.615850e-47 |
| Msa0097780 | Msa0675410 | 0.808701 | 2.722070e-50 | -8.615850e-47 |
| Msa0115270 | Msa0675410 | 0.802913 | 4.477589e-49 | -8.615850e-47 |
| Msa0607050 | Msa0675410 | 0.812848 | 3.447686e-51 | -8.615850e-47 |
| Msa0610430 | Msa0675410 | 0.830605 | 2.672560e-55 | -8.615850e-47 |
| Msa0615440 | Msa0675410 | 0.802226 | 6.203627e-49 | -8.615850e-47 |
| Msa0615490 | Msa0675410 | 0.802559 | 5.297968e-49 | -8.615850e-47 |
| Msa0617640 | Msa0675410 | 0.817507 | 3.182196e-52 | -8.615850e-47 |
| Msa0621490 | Msa0675410 | 0.840034 | 1.108404e-57 | -8.615850e-47 |
| Msa0623790 | Msa0675410 | 0.857878 | 1.209287e-62 | -8.615850e-47 |
| Msa0625720 | Msa0675410 | 0.808860 | 2.517027e-50 | -8.615850e-47 |
| Msa0636070 | Msa0675410 | 0.945714 | 1.818938e-104 | -8.615850e-47 |
| Msa0641670 | Msa0675410 | 0.831767 | 1.385183e-55 | -8.615850e-47 |
| Msa0643560 | Msa0675410 | 0.870221 | 1.719441e-66 | -8.615850e-47 |
| Msa0647500 | Msa0675410 | 0.825907 | 3.627837e-54 | -8.615850e-47 |
| Msa0649490 | Msa0675410 | 0.808332 | 3.262815e-50 | -8.615850e-47 |
| Msa0661190 | Msa0675410 | -0.839243 | 1.780672e-57 | -8.615850e-47 |
| Msa0663390 | Msa0675410 | 0.825815 | 3.816189e-54 | -8.615850e-47 |
| Msa0675410 | Msa0688390 | 0.812356 | 4.417643e-51 | -8.615850e-47 |
| Msa0675410 | Msa0688960 | 0.965737 | 5.403417e-125 | -8.615850e-47 |
| Msa0675410 | Msa0689260 | 0.804468 | 2.129140e-49 | -8.615850e-47 |
| Msa0675410 | Msa0690150 | 0.806487 | 8.030844e-50 | -8.615850e-47 |
| Msa0675410 | Msa0691900 | 0.821542 | 3.820601e-53 | -8.615850e-47 |
| Msa0675410 | Msa0692830 | 0.826683 | 2.371307e-54 | -8.615850e-47 |
| Msa0675410 | Msa0692950 | 0.828248 | 9.988109e-55 | -8.615850e-47 |
| Msa0675410 | Msa0698490 | 0.808577 | 2.893122e-50 | -8.615850e-47 |
| Msa0675410 | Msa0698540 | 0.832049 | 1.179547e-55 | -8.615850e-47 |
| Msa0675410 | Msa0698660 | 0.808281 | 3.345510e-50 | -8.615850e-47 |
| Msa0675410 | Msa0701920 | 0.809274 | 2.051429e-50 | -8.615850e-47 |
| Msa0675410 | Msa0709400 | 0.814986 | 1.164997e-51 | -8.615850e-47 |
| Msa0675410 | Msa0711780 | 0.824435 | 8.082505e-54 | -8.615850e-47 |
| Msa0675410 | Msa0716840 | 0.841919 | 3.547614e-58 | -8.615850e-47 |
| Msa0675410 | Msa0743950 | 0.807924 | 3.985636e-50 | -8.615850e-47 |
| Msa0675410 | Msa0769920 | 0.804031 | 2.625507e-49 | -8.615850e-47 |
| Msa0675410 | Msa0770200 | 0.801279 | 9.706704e-49 | -8.615850e-47 |
| Msa0675410 | Msa0780810 | 0.809313 | 2.012938e-50 | -8.615850e-47 |
| Msa0675410 | Msa0784860 | 0.808162 | 3.545843e-50 | -8.615850e-47 |
| Msa0675410 | Msa0788850 | 0.841537 | 4.474272e-58 | -8.615850e-47 |
| Msa0675410 | Msa0793800 | 0.802822 | 4.673872e-49 | -8.615850e-47 |
| Msa0675410 | Msa0794670 | 0.827309 | 1.679912e-54 | -8.615850e-47 |
| Msa0675410 | Msa0796700 | 0.819496 | 1.126734e-52 | -8.615850e-47 |
| Msa0675410 | Msa0804230 | 0.800771 | 1.232355e-48 | -8.615850e-47 |
| Msa0675410 | Msa0808080 | 0.816333 | 5.837223e-52 | -8.615850e-47 |
| Msa0675410 | Msa0808270 | 0.849668 | 2.789027e-60 | -8.615850e-47 |
| Msa0675410 | Msa0813720 | 0.807957 | 3.921958e-50 | -8.615850e-47 |
| Msa0675410 | Msa0830540 | 0.814077 | 1.851090e-51 | -8.615850e-47 |
| Msa0675410 | Msa0833460 | 0.800082 | 1.702991e-48 | -8.615850e-47 |
| Msa0675410 | Msa0847770 | 0.826744 | 2.293639e-54 | -8.615850e-47 |
| Msa0675410 | Msa0849030 | 0.814110 | 1.820383e-51 | -8.615850e-47 |
| Msa0675410 | Msa0864250 | 0.806015 | 1.010063e-49 | -8.615850e-47 |
| Msa0675410 | Msa0871270 | 0.821754 | 3.412703e-53 | -8.615850e-47 |
| Msa0675410 | Msa0876200 | 0.800329 | 1.517138e-48 | -8.615850e-47 |
| Msa0675410 | Msa0878500 | 0.827714 | 1.343477e-54 | -8.615850e-47 |
| Msa0675410 | Msa0900110 | 0.820800 | 5.663704e-53 | -8.615850e-47 |
| Msa0675410 | Msa0926850 | 0.806497 | 7.992632e-50 | -8.615850e-47 |
| Msa0675410 | Msa0927260 | 0.813352 | 2.673225e-51 | -8.615850e-47 |
| Msa0675410 | Msa0938220 | 0.817150 | 3.827541e-52 | -8.615850e-47 |
| Msa0675410 | Msa0944190 | 0.843399 | 1.435018e-58 | -8.615850e-47 |
| Msa0675410 | Msa0945970 | 0.841455 | 4.701941e-58 | -8.615850e-47 |
| Msa0675410 | Msa0947660 | 0.816262 | 6.054018e-52 | -8.615850e-47 |
| Msa0675410 | Msa0969810 | 0.813754 | 2.180747e-51 | -8.615850e-47 |
| Msa0675410 | Msa0974070 | 0.800889 | 1.166320e-48 | -8.615850e-47 |
| Msa0675410 | Msa0981060 | 0.821292 | 4.363134e-53 | -8.615850e-47 |
| Msa0675410 | Msa0999430 | 0.802137 | 6.471523e-49 | -8.615850e-47 |
| Msa0675410 | Msa0999970 | 0.849955 | 2.319263e-60 | -8.615850e-47 |
| Msa0675410 | Msa1003620 | 0.811533 | 6.674405e-51 | -8.615850e-47 |
| Msa0675410 | Msa1011680 | 0.800606 | 1.332218e-48 | -8.615850e-47 |
| Msa0675410 | Msa1012830 | 0.832073 | 1.163550e-55 | -8.615850e-47 |
| Msa0675410 | Msa1014540 | 0.807147 | 5.827220e-50 | -8.615850e-47 |
| Msa0675410 | Msa1030620 | 0.839010 | 2.046332e-57 | -8.615850e-47 |
| Msa0675410 | Msa1037420 | 0.859613 | 3.664517e-63 | -8.615850e-47 |
| Msa0675410 | Msa1041850 | 0.805466 | 1.316788e-49 | -8.615850e-47 |
| Msa0675410 | Msa1046020 | 0.838241 | 3.232796e-57 | -8.615850e-47 |
| Msa0675410 | Msa1046060 | 0.841361 | 4.977794e-58 | -8.615850e-47 |
| Msa0675410 | Msa1046460 | 0.808009 | 3.823181e-50 | -8.615850e-47 |
| Msa0675410 | Msa1051200 | 0.826373 | 2.810838e-54 | -8.615850e-47 |
| Msa0675410 | Msa1077030 | 0.813771 | 2.161799e-51 | -8.615850e-47 |
| Msa0675410 | Msa1080290 | 0.810900 | 9.156345e-51 | -8.615850e-47 |
| Msa0675410 | Msa1087710 | 0.823887 | 1.087412e-53 | -8.615850e-47 |
| Msa0675410 | Msa1088640 | 0.804939 | 1.698124e-49 | -8.615850e-47 |
| Msa0675410 | Msa1091100 | 0.829645 | 4.583570e-55 | -8.615850e-47 |
| Msa0675410 | Msa1104140 | 0.811065 | 8.435375e-51 | -8.615850e-47 |
| Msa0675410 | Msa1106700 | 0.809238 | 2.088425e-50 | -8.615850e-47 |
| Msa0675410 | Msa1115080 | 0.805040 | 1.617362e-49 | -8.615850e-47 |
| Msa0675410 | Msa1121440 | 0.816993 | 4.152782e-52 | -8.615850e-47 |
| Msa0675410 | Msa1123810 | 0.857642 | 1.420155e-62 | -8.615850e-47 |
| Msa0675410 | Msa1124960 | 0.816472 | 5.433165e-52 | -8.615850e-47 |
| Msa0675410 | Msa1128060 | 0.824411 | 8.189240e-54 | -8.615850e-47 |
| Msa0675410 | Msa1134090 | 0.824331 | 8.553215e-54 | -8.615850e-47 |
| Msa0675410 | Msa1136540 | 0.803284 | 3.751946e-49 | -8.615850e-47 |
| Msa0675410 | Msa1137700 | 0.811354 | 7.300279e-51 | -8.615850e-47 |
| Msa0675410 | Msa1162270 | 0.812754 | 3.615624e-51 | -8.615850e-47 |
| Msa0675410 | Msa1167340 | 0.818542 | 1.856160e-52 | -8.615850e-47 |
| Msa0675410 | Msa1171870 | 0.810015 | 1.421961e-50 | -8.615850e-47 |
| Msa0675410 | Msa1173140 | 0.820099 | 8.203274e-53 | -8.615850e-47 |
| Msa0675410 | Msa1181250 | 0.810188 | 1.305317e-50 | -8.615850e-47 |
| Msa0675410 | Msa1181330 | 0.803079 | 4.136955e-49 | -8.615850e-47 |
| Msa0675410 | Msa1203250 | 0.806925 | 6.492821e-50 | -8.615850e-47 |
| Msa0675410 | Msa1206670 | 0.813061 | 3.096850e-51 | -8.615850e-47 |
| Msa0675410 | Msa1208880 | 0.811131 | 8.163459e-51 | -8.615850e-47 |
| Msa0675410 | Msa1210020 | 0.820791 | 5.691475e-53 | -8.615850e-47 |
| Msa0675410 | Msa1211890 | 0.810202 | 1.296107e-50 | -8.615850e-47 |
| Msa0675410 | Msa1231840 | 0.816003 | 6.917181e-52 | -8.615850e-47 |
| Msa0675410 | Msa1245540 | 0.807407 | 5.132511e-50 | -8.615850e-47 |
| Msa0675410 | Msa1253020 | 0.823328 | 1.469665e-53 | -8.615850e-47 |
| Msa0675410 | Msa1254730 | 0.817812 | 2.715244e-52 | -8.615850e-47 |
| Msa0675410 | Msa1256250 | 0.810146 | 1.332697e-50 | -8.615850e-47 |
| Msa0675410 | Msa1275360 | 0.811396 | 7.150688e-51 | -8.615850e-47 |
| Msa0675410 | Msa1280320 | 0.800153 | 1.647218e-48 | -8.615850e-47 |
| Msa0675410 | Msa1287460 | 0.826933 | 2.066744e-54 | -8.615850e-47 |
| Msa0675410 | Msa1291890 | 0.805979 | 1.027510e-49 | -8.615850e-47 |
| Msa0675410 | Msa1294820 | 0.809012 | 2.334583e-50 | -8.615850e-47 |
| Msa0675410 | Msa1298510 | 0.803912 | 2.779167e-49 | -8.615850e-47 |
| Msa0675410 | Msa1306430 | 0.809282 | 2.043345e-50 | -8.615850e-47 |
| Msa0675410 | Msa1306560 | 0.816865 | 4.436544e-52 | -8.615850e-47 |
| Msa0675410 | Msa1306860 | 0.809895 | 1.509480e-50 | -8.615850e-47 |
| Msa0675410 | Msa1332040 | -0.812286 | 4.576130e-51 | -8.615850e-47 |
| Msa0675410 | Msa1340470 | 0.802301 | 5.986379e-49 | -8.615850e-47 |
| Msa0675410 | Msa1353330 | 0.805684 | 1.185061e-49 | -8.615850e-47 |
| Msa0675410 | Msa1353980 | 0.802203 | 6.271444e-49 | -8.615850e-47 |
| Msa0675410 | Msa1358250 | 0.808050 | 3.746387e-50 | -8.615850e-47 |
| Msa0675410 | Msa1361520 | 0.830782 | 2.418381e-55 | -8.615850e-47 |
| Msa0675410 | Msa1374120 | 0.816662 | 4.926108e-52 | -8.615850e-47 |
| Msa0675410 | Msa1375380 | 0.820695 | 5.986194e-53 | -8.615850e-47 |
| Msa0675410 | Msa1382620 | 0.800310 | 1.530361e-48 | -8.615850e-47 |
| Msa0675410 | Msa1385770 | 0.883629 | 3.817420e-71 | -8.615850e-47 |
| Msa0675410 | Msa1386780 | 0.836525 | 8.892342e-57 | -8.615850e-47 |
| Msa0675410 | Msa1389800 | 0.806755 | 7.051065e-50 | -8.615850e-47 |
| Msa0675410 | Msa1391410 | 0.841089 | 5.871740e-58 | -8.615850e-47 |
| Msa0675410 | Msa1392780 | 0.808976 | 2.377243e-50 | -8.615850e-47 |
| Msa0675410 | Msa1394290 | 0.825904 | 3.634897e-54 | -8.615850e-47 |
| Msa0675410 | Msa1394500 | 0.810918 | 9.074417e-51 | -8.615850e-47 |
| Msa0675410 | Msa1400580 | 0.809030 | 2.314572e-50 | -8.615850e-47 |
| Msa0675410 | Msa1403340 | 0.820129 | 8.072021e-53 | -8.615850e-47 |
| Msa0675410 | Msa1409240 | 0.883079 | 6.074591e-71 | -8.615850e-47 |
| Msa0675410 | Msa1410100 | 0.802398 | 5.717421e-49 | -8.615850e-47 |
| Msa0675410 | Msa1419800 | -0.810513 | 1.110506e-50 | -8.615850e-47 |
| Msa0675410 | Msa1420990 | 0.823751 | 1.170152e-53 | -8.615850e-47 |
| Msa0675410 | Msa1426030 | 0.833130 | 6.362241e-56 | -8.615850e-47 |
| Msa0675410 | Msa1432420 | 0.853719 | 1.984421e-61 | -8.615850e-47 |
| Msa0675410 | Msa1433390 | 0.804253 | 2.360938e-49 | -8.615850e-47 |
| Msa0675410 | Msa1434140 | 0.875792 | 2.330655e-68 | -8.615850e-47 |
| Msa0675410 | Msa1439550 | 0.809313 | 2.012300e-50 | -8.615850e-47 |
| Msa0675410 | Msa1443850 | 0.800256 | 1.569245e-48 | -8.615850e-47 |
| Msa0675410 | Msa1444310 | 0.806053 | 9.914345e-50 | -8.615850e-47 |
| Msa0675410 | Msa1451550 | 0.802612 | 5.164312e-49 | -8.615850e-47 |
| Msa0675410 | Msa1452240 | 0.802003 | 6.894046e-49 | -8.615850e-47 |
| Msa0675410 | Msa1453780 | -0.824154 | 9.413782e-54 | -8.615850e-47 |
| Msa0675410 | Msa1454480 | 0.824926 | 6.192544e-54 | -8.615850e-47 |
| Msa0675410 | Msa1457920 | 0.831630 | 1.496704e-55 | -8.615850e-47 |
| Msa0675410 | Msa1466540 | 0.804630 | 1.969584e-49 | -8.615850e-47 |
| Msa0127050 | Msa0675410 | 0.824078 | 9.808490e-54 | -8.615850e-47 |
| Msa0129190 | Msa0675410 | -0.827611 | 1.421955e-54 | -8.615850e-47 |
| Msa0135380 | Msa0675410 | 0.805538 | 1.272107e-49 | -8.615850e-47 |
| Msa0136070 | Msa0675410 | 0.841235 | 5.372929e-58 | -8.615850e-47 |
| Msa0136100 | Msa0675410 | 0.811837 | 5.732107e-51 | -8.615850e-47 |
| Msa0137550 | Msa0675410 | 0.801647 | 8.156960e-49 | -8.615850e-47 |
| Msa0138630 | Msa0675410 | 0.805844 | 1.097128e-49 | -8.615850e-47 |
| Msa0140650 | Msa0675410 | 0.819698 | 1.013321e-52 | -8.615850e-47 |
| Msa0142980 | Msa0675410 | 0.802472 | 5.519003e-49 | -8.615850e-47 |
| Msa0145440 | Msa0675410 | 0.810067 | 1.386135e-50 | -8.615850e-47 |
| Msa0145730 | Msa0675410 | 0.826282 | 2.955781e-54 | -8.615850e-47 |
| Msa0150300 | Msa0675410 | 0.809330 | 1.995899e-50 | -8.615850e-47 |
| Msa0150820 | Msa0675410 | 0.810600 | 1.063457e-50 | -8.615850e-47 |
| Msa0159340 | Msa0675410 | 0.822336 | 2.501574e-53 | -8.615850e-47 |
| Msa0160550 | Msa0675410 | 0.843650 | 1.229532e-58 | -8.615850e-47 |
| Msa0162130 | Msa0675410 | 0.800604 | 1.333446e-48 | -8.615850e-47 |
| Msa0165660 | Msa0675410 | 0.808700 | 2.723219e-50 | -8.615850e-47 |
| Msa0169310 | Msa0675410 | 0.807162 | 5.783777e-50 | -8.615850e-47 |
| Msa0171540 | Msa0675410 | 0.806075 | 9.810857e-50 | -8.615850e-47 |
| Msa0172070 | Msa0675410 | 0.824213 | 9.119467e-54 | -8.615850e-47 |
| Msa0172970 | Msa0675410 | 0.842689 | 2.218588e-58 | -8.615850e-47 |
| Msa0184040 | Msa0675410 | 0.802840 | 4.634194e-49 | -8.615850e-47 |
| Msa0184780 | Msa0675410 | 0.832579 | 8.723085e-56 | -8.615850e-47 |
| Msa0189300 | Msa0675410 | 0.807572 | 4.735142e-50 | -8.615850e-47 |
| Msa0192510 | Msa0675410 | 0.815427 | 9.295215e-52 | -8.615850e-47 |
| Msa0193120 | Msa0675410 | 0.819980 | 8.733513e-53 | -8.615850e-47 |
| Msa0207670 | Msa0675410 | 0.808536 | 2.951727e-50 | -8.615850e-47 |
| Msa0208220 | Msa0675410 | 0.801521 | 8.658811e-49 | -8.615850e-47 |
| Msa0208350 | Msa0675410 | 0.805253 | 1.459349e-49 | -8.615850e-47 |
| Msa0209350 | Msa0675410 | 0.821250 | 4.461761e-53 | -8.615850e-47 |
| Msa0211150 | Msa0675410 | 0.809353 | 1.973410e-50 | -8.615850e-47 |
| Msa0220720 | Msa0675410 | 0.811714 | 6.099083e-51 | -8.615850e-47 |
| Msa0228070 | Msa0675410 | 0.810269 | 1.253531e-50 | -8.615850e-47 |
| Msa0229380 | Msa0675410 | 0.811388 | 7.177325e-51 | -8.615850e-47 |
| Msa0366890 | Msa0675410 | 0.822777 | 1.975480e-53 | -8.615850e-47 |
| Msa0369050 | Msa0675410 | 0.828067 | 1.104483e-54 | -8.615850e-47 |
| Msa0369220 | Msa0675410 | 0.817435 | 3.303256e-52 | -8.615850e-47 |
| Msa0372340 | Msa0675410 | 0.803135 | 4.027903e-49 | -8.615850e-47 |
| Msa0383500 | Msa0675410 | 0.803455 | 3.457201e-49 | -8.615850e-47 |
| Msa0383800 | Msa0675410 | 0.860292 | 2.285901e-63 | -8.615850e-47 |
| Msa0385580 | Msa0675410 | 0.849559 | 2.991439e-60 | -8.615850e-47 |
| Msa0397540 | Msa0675410 | 0.810196 | 1.299802e-50 | -8.615850e-47 |
| Msa0402650 | Msa0675410 | 0.803951 | 2.728563e-49 | -8.615850e-47 |
| Msa0402790 | Msa0675410 | 0.808740 | 2.669982e-50 | -8.615850e-47 |
| Msa0434180 | Msa0675410 | 0.818812 | 1.612566e-52 | -8.615850e-47 |
| Msa0440750 | Msa0675410 | 0.801130 | 1.041272e-48 | -8.615850e-47 |
| Msa0442190 | Msa0675410 | 0.830602 | 2.678125e-55 | -8.615850e-47 |
| Msa0442200 | Msa0675410 | 0.801251 | 9.835079e-49 | -8.615850e-47 |
| Msa0458060 | Msa0675410 | 0.800380 | 1.480878e-48 | -8.615850e-47 |
| Msa0471440 | Msa0675410 | 0.806771 | 6.996158e-50 | -8.615850e-47 |
| Msa0479970 | Msa0675410 | 0.813538 | 2.433405e-51 | -8.615850e-47 |
| Msa0481530 | Msa0675410 | 0.817094 | 3.940158e-52 | -8.615850e-47 |
| Msa0241390 | Msa0675410 | 0.851471 | 8.686020e-61 | -8.615850e-47 |
| Msa0242410 | Msa0675410 | 0.810930 | 9.020363e-51 | -8.615850e-47 |
| Msa0260680 | Msa0675410 | 0.842135 | 3.110171e-58 | -8.615850e-47 |
| Msa0262310 | Msa0675410 | 0.817099 | 3.931151e-52 | -8.615850e-47 |
| Msa0264150 | Msa0675410 | 0.802773 | 4.785321e-49 | -8.615850e-47 |
| Msa0279220 | Msa0675410 | 0.814044 | 1.882495e-51 | -8.615850e-47 |
| Msa0279240 | Msa0675410 | 0.843265 | 1.558577e-58 | -8.615850e-47 |
| Msa0279700 | Msa0675410 | 0.805952 | 1.041219e-49 | -8.615850e-47 |
| Msa0280090 | Msa0675410 | 0.824686 | 7.057434e-54 | -8.615850e-47 |
| Msa0298700 | Msa0675410 | 0.812637 | 3.836112e-51 | -8.615850e-47 |
| Msa0299870 | Msa0675410 | 0.821893 | 3.169415e-53 | -8.615850e-47 |
| Msa0309770 | Msa0675410 | 0.843122 | 1.701603e-58 | -8.615850e-47 |
| Msa0315440 | Msa0675410 | -0.803415 | 3.524066e-49 | -8.615850e-47 |
| Msa0318980 | Msa0675410 | 0.847034 | 1.492451e-59 | -8.615850e-47 |
| Msa0333030 | Msa0675410 | 0.814931 | 1.197863e-51 | -8.615850e-47 |
| Msa0337240 | Msa0675410 | 0.815738 | 7.926029e-52 | -8.615850e-47 |
| Msa0337650 | Msa0675410 | 0.802925 | 4.450691e-49 | -8.615850e-47 |
| Msa0340380 | Msa0675410 | 0.817785 | 2.753284e-52 | -8.615850e-47 |
| Msa0345350 | Msa0675410 | 0.818078 | 2.364467e-52 | -8.615850e-47 |
| Msa0488020 | Msa0675410 | 0.800492 | 1.404973e-48 | -8.615850e-47 |
| Msa0493410 | Msa0675410 | 0.801646 | 8.160106e-49 | -8.615850e-47 |
| Msa0502880 | Msa0675410 | 0.845102 | 5.006298e-59 | -8.615850e-47 |
| Msa0504020 | Msa0675410 | 0.806773 | 6.991019e-50 | -8.615850e-47 |
| Msa0508590 | Msa0675410 | 0.811856 | 5.677443e-51 | -8.615850e-47 |
| Msa0508630 | Msa0675410 | 0.803874 | 2.830270e-49 | -8.615850e-47 |
| Msa0508870 | Msa0675410 | 0.805920 | 1.057387e-49 | -8.615850e-47 |
| Msa0510350 | Msa0675410 | 0.850105 | 2.105785e-60 | -8.615850e-47 |
| Msa0511310 | Msa0675410 | 0.800175 | 1.630639e-48 | -8.615850e-47 |
| Msa0521500 | Msa0675410 | 0.806117 | 9.613584e-50 | -8.615850e-47 |
| Msa0529890 | Msa0675410 | 0.809492 | 1.842462e-50 | -8.615850e-47 |
| Msa0541360 | Msa0675410 | 0.962642 | 4.030495e-121 | -8.615850e-47 |
| Msa0541410 | Msa0675410 | 0.974016 | 2.032077e-137 | -8.615850e-47 |
| Msa0548240 | Msa0675410 | 0.822545 | 2.236896e-53 | -8.615850e-47 |
| Msa0555450 | Msa0675410 | 0.814810 | 1.274484e-51 | -8.615850e-47 |
| Msa0556060 | Msa0675410 | 0.806418 | 8.304135e-50 | -8.615850e-47 |
| Msa0585560 | Msa0675410 | 0.815099 | 1.099371e-51 | -8.615850e-47 |
| Msa0598720 | Msa0675410 | 0.811423 | 7.053097e-51 | -8.615850e-47 |
| Msa0598810 | Msa0675410 | 0.808599 | 2.862048e-50 | -8.615850e-47 |
| Msa0602390 | Msa0675410 | 0.816590 | 5.114308e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0675410 | MtrunA17_Chr4g0018731 | 78.846 | 104 | 16 | 2 | 27 | 126 | 71 | 172 | 5.57e-27 | 99.4 |
| Msa0675410 | MtrunA17_Chr1g0168301 | 81.897 | 116 | 17 | 1 | 27 | 138 | 210 | 325 | 3.21e-19 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 34 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGTGTTTAAGACTAAC+AGG | 0.286414 | 4_4:-24051750 | Msa0675410:CDS |
| ATCATCAACTGACAGTGATT+CGG | 0.382705 | 4_4:-24051512 | Msa0675410:CDS |
| AAAGGAGGAGGAGGGAGCAC+AGG | 0.386258 | 4_4:-24051699 | Msa0675410:CDS |
| TCATCAACTGACAGTGATTC+GGG | 0.386672 | 4_4:-24051511 | Msa0675410:CDS |
| GATTCGGGTGATGGATATAA+TGG | 0.404972 | 4_4:-24051496 | Msa0675410:CDS |
| ACCATGGAGATGATGATTAG+AGG | 0.412561 | 4_4:-24051423 | None:intergenic |
| TGGATATAATGGTTCAAGTA+AGG | 0.433386 | 4_4:-24051485 | Msa0675410:CDS |
| CTATATTCATCACTATCATC+TGG | 0.440092 | 4_4:+24051655 | None:intergenic |
| GCTAGTGATTCAGATGGTTC+CGG | 0.468678 | 4_4:-24051724 | Msa0675410:CDS |
| ACTGACAGTGATTCGGGTGA+TGG | 0.486358 | 4_4:-24051505 | Msa0675410:CDS |
| CTCCCTCCTCCTCCTTTCAC+CGG | 0.487250 | 4_4:+24051705 | None:intergenic |
| GTAGGAAAGAGAAGAGGAGA+AGG | 0.494224 | 4_4:-24051615 | Msa0675410:CDS |
| ACAAAGATGCTGACCGAAAG+AGG | 0.498522 | 4_4:-24051796 | Msa0675410:CDS |
| ATTCAGATGGTTCCGGTGAA+AGG | 0.502557 | 4_4:-24051717 | Msa0675410:CDS |
| TCCTCTAATCATCATCTCCA+TGG | 0.523954 | 4_4:+24051422 | None:intergenic |
| GTTCCGGTGAAAGGAGGAGG+AGG | 0.525308 | 4_4:-24051708 | Msa0675410:CDS |
| ATGAATATAGACACAAGAAA+AGG | 0.532593 | 4_4:-24051642 | Msa0675410:CDS |
| GGATATAATGGTTCAAGTAA+GGG | 0.549938 | 4_4:-24051484 | Msa0675410:CDS |
| ATGGTTCCGGTGAAAGGAGG+AGG | 0.558346 | 4_4:-24051711 | Msa0675410:CDS |
| TAATGGTTCAAGTAAGGGTA+GGG | 0.560844 | 4_4:-24051479 | Msa0675410:CDS |
| GACACAAGAAAAGGAAGAGT+AGG | 0.567421 | 4_4:-24051633 | Msa0675410:CDS |
| TTCTGATTCTGAAACATCTG+AGG | 0.573778 | 4_4:-24051575 | Msa0675410:CDS |
| AGAGAGGTAGAGAAAAGAGA+AGG | 0.579127 | 4_4:-24051769 | Msa0675410:CDS |
| ATAATGGTTCAAGTAAGGGT+AGG | 0.582111 | 4_4:-24051480 | Msa0675410:CDS |
| GGAAGAGTAGGAAAGAGAAG+AGG | 0.590104 | 4_4:-24051621 | Msa0675410:CDS |
| GGGAGCACAGGAGAAGCATG+AGG | 0.590249 | 4_4:-24051687 | Msa0675410:CDS |
| AAGAGGAGGAGACGCCACCA+TGG | 0.594257 | 4_4:-24051439 | Msa0675410:CDS |
| CAGATGGTTCCGGTGAAAGG+AGG | 0.617536 | 4_4:-24051714 | Msa0675410:CDS |
| CATCTGAGGATTCTACTTCG+CGG | 0.617958 | 4_4:-24051561 | Msa0675410:CDS |
| AGGGAAGCTAGTGATTCAGA+TGG | 0.649064 | 4_4:-24051730 | Msa0675410:CDS |
| GGAGCACAGGAGAAGCATGA+GGG | 0.656858 | 4_4:-24051686 | Msa0675410:CDS |
| TTCCGGTGAAAGGAGGAGGA+GGG | 0.666380 | 4_4:-24051707 | Msa0675410:CDS |
| AGGAGTGTTTAAGACTAACA+GGG | 0.683554 | 4_4:-24051749 | Msa0675410:CDS |
| TCTAATCATCATCTCCATGG+TGG | 0.691101 | 4_4:+24051425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCAAAAAATCAGAAAAG+AGG | - | chr4_4:24051790-24051809 | Msa0675410:CDS | 20.0% |
| ! | ATGAATATAGACACAAGAAA+AGG | - | chr4_4:24051604-24051623 | Msa0675410:CDS | 25.0% |
| CTATATTCATCACTATCATC+TGG | + | chr4_4:24051594-24051613 | None:intergenic | 30.0% | |
| TGGATATAATGGTTCAAGTA+AGG | - | chr4_4:24051761-24051780 | Msa0675410:CDS | 30.0% | |
| GGATATAATGGTTCAAGTAA+GGG | - | chr4_4:24051762-24051781 | Msa0675410:CDS | 30.0% | |
| TCAAAAAATCAGAAAAGAGG+AGG | - | chr4_4:24051793-24051812 | Msa0675410:CDS | 30.0% | |
| ! | TACCTCTCTTTTTCCTCTTT+CGG | + | chr4_4:24051466-24051485 | None:intergenic | 35.0% |
| !! | AAGGAGTGTTTAAGACTAAC+AGG | - | chr4_4:24051496-24051515 | Msa0675410:CDS | 35.0% |
| !! | AGGAGTGTTTAAGACTAACA+GGG | - | chr4_4:24051497-24051516 | Msa0675410:CDS | 35.0% |
| !! | TTCTGATTCTGAAACATCTG+AGG | - | chr4_4:24051671-24051690 | Msa0675410:CDS | 35.0% |
| ATCATCAACTGACAGTGATT+CGG | - | chr4_4:24051734-24051753 | Msa0675410:CDS | 35.0% | |
| ATAATGGTTCAAGTAAGGGT+AGG | - | chr4_4:24051766-24051785 | Msa0675410:CDS | 35.0% | |
| TAATGGTTCAAGTAAGGGTA+GGG | - | chr4_4:24051767-24051786 | Msa0675410:CDS | 35.0% | |
| AGAGAGGTAGAGAAAAGAGA+AGG | - | chr4_4:24051477-24051496 | Msa0675410:CDS | 40.0% | |
| GACACAAGAAAAGGAAGAGT+AGG | - | chr4_4:24051613-24051632 | Msa0675410:CDS | 40.0% | |
| TCATCAACTGACAGTGATTC+GGG | - | chr4_4:24051735-24051754 | Msa0675410:CDS | 40.0% | |
| !! | GATTCGGGTGATGGATATAA+TGG | - | chr4_4:24051750-24051769 | Msa0675410:CDS | 40.0% |
| ACAAAGATGCTGACCGAAAG+AGG | - | chr4_4:24051450-24051469 | Msa0675410:CDS | 45.0% | |
| GACCGAAAGAGGAAAAAGAG+AGG | - | chr4_4:24051461-24051480 | Msa0675410:CDS | 45.0% | |
| AGGGAAGCTAGTGATTCAGA+TGG | - | chr4_4:24051516-24051535 | Msa0675410:CDS | 45.0% | |
| GCTAGTGATTCAGATGGTTC+CGG | - | chr4_4:24051522-24051541 | Msa0675410:CDS | 45.0% | |
| ATTCAGATGGTTCCGGTGAA+AGG | - | chr4_4:24051529-24051548 | Msa0675410:CDS | 45.0% | |
| GGAAGAGTAGGAAAGAGAAG+AGG | - | chr4_4:24051625-24051644 | Msa0675410:CDS | 45.0% | |
| GTAGGAAAGAGAAGAGGAGA+AGG | - | chr4_4:24051631-24051650 | Msa0675410:CDS | 45.0% | |
| CATCTGAGGATTCTACTTCG+CGG | - | chr4_4:24051685-24051704 | Msa0675410:CDS | 45.0% | |
| ! | ACTGACAGTGATTCGGGTGA+TGG | - | chr4_4:24051741-24051760 | Msa0675410:CDS | 50.0% |
| CAGATGGTTCCGGTGAAAGG+AGG | - | chr4_4:24051532-24051551 | Msa0675410:CDS | 55.0% | |
| ATGGTTCCGGTGAAAGGAGG+AGG | - | chr4_4:24051535-24051554 | Msa0675410:CDS | 55.0% | |
| TTCCGGTGAAAGGAGGAGGA+GGG | - | chr4_4:24051539-24051558 | Msa0675410:CDS | 55.0% | |
| ! | GGAGCACAGGAGAAGCATGA+GGG | - | chr4_4:24051560-24051579 | Msa0675410:CDS | 55.0% |
| GTTCCGGTGAAAGGAGGAGG+AGG | - | chr4_4:24051538-24051557 | Msa0675410:CDS | 60.0% | |
| CTCCCTCCTCCTCCTTTCAC+CGG | + | chr4_4:24051544-24051563 | None:intergenic | 60.0% | |
| ! | AAAGGAGGAGGAGGGAGCAC+AGG | - | chr4_4:24051547-24051566 | Msa0675410:CDS | 60.0% |
| ! | GGGAGCACAGGAGAAGCATG+AGG | - | chr4_4:24051559-24051578 | Msa0675410:CDS | 60.0% |
| AAGAGGAGGAGACGCCACCA+TGG | - | chr4_4:24051807-24051826 | Msa0675410:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 24051426 | 24051842 | 24051426 | ID=Msa0675410;Name=Msa0675410 |
| chr4_4 | mRNA | 24051426 | 24051842 | 24051426 | ID=Msa0675410-mRNA-1;Parent=Msa0675410;Name=Msa0675410-mRNA-1;_AED=0.39;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|138 |
| chr4_4 | exon | 24051426 | 24051842 | 24051426 | ID=Msa0675410-mRNA-1:exon:6708;Parent=Msa0675410-mRNA-1 |
| chr4_4 | CDS | 24051426 | 24051842 | 24051426 | ID=Msa0675410-mRNA-1:cds;Parent=Msa0675410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
