Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345350 | XP_039688223.1 | 95.029 | 342 | 15 | 1 | 1 | 340 | 1 | 342 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345350 | A0A396IKZ4 | 95.029 | 342 | 15 | 1 | 1 | 340 | 1 | 342 | 0.0 | 641 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0345350 | 0.802213 | 6.241697e-49 | -8.615850e-47 |
| Msa0006040 | Msa0345350 | 0.834230 | 3.379806e-56 | -8.615850e-47 |
| Msa0006380 | Msa0345350 | 0.813899 | 2.026522e-51 | -8.615850e-47 |
| Msa0007440 | Msa0345350 | 0.833865 | 4.172157e-56 | -8.615850e-47 |
| Msa0010490 | Msa0345350 | 0.809101 | 2.234707e-50 | -8.615850e-47 |
| Msa0011960 | Msa0345350 | 0.858704 | 6.860172e-63 | -8.615850e-47 |
| Msa0015930 | Msa0345350 | 0.833588 | 4.891519e-56 | -8.615850e-47 |
| Msa0020300 | Msa0345350 | 0.805649 | 1.205576e-49 | -8.615850e-47 |
| Msa0020390 | Msa0345350 | 0.800497 | 1.401873e-48 | -8.615850e-47 |
| Msa0023000 | Msa0345350 | 0.825008 | 5.923818e-54 | -8.615850e-47 |
| Msa0023010 | Msa0345350 | 0.802481 | 5.496104e-49 | -8.615850e-47 |
| Msa0025730 | Msa0345350 | 0.842789 | 2.087020e-58 | -8.615850e-47 |
| Msa0027260 | Msa0345350 | 0.821389 | 4.144896e-53 | -8.615850e-47 |
| Msa0027770 | Msa0345350 | 0.821981 | 3.023346e-53 | -8.615850e-47 |
| Msa0028660 | Msa0345350 | 0.820172 | 7.893945e-53 | -8.615850e-47 |
| Msa0032090 | Msa0345350 | 0.808271 | 3.362561e-50 | -8.615850e-47 |
| Msa0032580 | Msa0345350 | 0.855986 | 4.364403e-62 | -8.615850e-47 |
| Msa0033110 | Msa0345350 | 0.840584 | 7.962858e-58 | -8.615850e-47 |
| Msa0033260 | Msa0345350 | 0.834620 | 2.696918e-56 | -8.615850e-47 |
| Msa0033950 | Msa0345350 | 0.840693 | 7.455493e-58 | -8.615850e-47 |
| Msa0034030 | Msa0345350 | 0.837303 | 5.628763e-57 | -8.615850e-47 |
| Msa0036160 | Msa0345350 | 0.822813 | 1.937277e-53 | -8.615850e-47 |
| Msa0037540 | Msa0345350 | -0.801194 | 1.009931e-48 | -8.615850e-47 |
| Msa0040690 | Msa0345350 | 0.826396 | 2.775645e-54 | -8.615850e-47 |
| Msa0043660 | Msa0345350 | 0.873382 | 1.535064e-67 | -8.615850e-47 |
| Msa0047160 | Msa0345350 | 0.843125 | 1.698472e-58 | -8.615850e-47 |
| Msa0052640 | Msa0345350 | 0.804817 | 1.800816e-49 | -8.615850e-47 |
| Msa0052770 | Msa0345350 | 0.834269 | 3.305163e-56 | -8.615850e-47 |
| Msa0054440 | Msa0345350 | 0.809224 | 2.103599e-50 | -8.615850e-47 |
| Msa0054480 | Msa0345350 | 0.804487 | 2.110255e-49 | -8.615850e-47 |
| Msa0054750 | Msa0345350 | 0.859499 | 3.966292e-63 | -8.615850e-47 |
| Msa0055180 | Msa0345350 | 0.838661 | 2.518926e-57 | -8.615850e-47 |
| Msa0058300 | Msa0345350 | 0.832474 | 9.260628e-56 | -8.615850e-47 |
| Msa0059040 | Msa0345350 | 0.825261 | 5.160769e-54 | -8.615850e-47 |
| Msa0059110 | Msa0345350 | 0.838969 | 2.096104e-57 | -8.615850e-47 |
| Msa0061080 | Msa0345350 | 0.812371 | 4.384857e-51 | -8.615850e-47 |
| Msa0063530 | Msa0345350 | 0.836726 | 7.901771e-57 | -8.615850e-47 |
| Msa0070700 | Msa0345350 | 0.802596 | 5.204578e-49 | -8.615850e-47 |
| Msa0075500 | Msa0345350 | 0.814139 | 1.793415e-51 | -8.615850e-47 |
| Msa0075960 | Msa0345350 | 0.816147 | 6.424770e-52 | -8.615850e-47 |
| Msa0076320 | Msa0345350 | 0.817422 | 3.325876e-52 | -8.615850e-47 |
| Msa0079180 | Msa0345350 | 0.827103 | 1.882192e-54 | -8.615850e-47 |
| Msa0086180 | Msa0345350 | 0.807422 | 5.093015e-50 | -8.615850e-47 |
| Msa0089820 | Msa0345350 | 0.822625 | 2.142627e-53 | -8.615850e-47 |
| Msa0090520 | Msa0345350 | 0.822698 | 2.060729e-53 | -8.615850e-47 |
| Msa0091410 | Msa0345350 | 0.838729 | 2.419027e-57 | -8.615850e-47 |
| Msa0091570 | Msa0345350 | 0.816225 | 6.171709e-52 | -8.615850e-47 |
| Msa0094470 | Msa0345350 | 0.841314 | 5.122712e-58 | -8.615850e-47 |
| Msa0097780 | Msa0345350 | 0.816279 | 6.001214e-52 | -8.615850e-47 |
| Msa0100740 | Msa0345350 | 0.821182 | 4.625445e-53 | -8.615850e-47 |
| Msa0105620 | Msa0345350 | 0.829782 | 4.245589e-55 | -8.615850e-47 |
| Msa0112770 | Msa0345350 | 0.816715 | 4.794782e-52 | -8.615850e-47 |
| Msa0115130 | Msa0345350 | 0.803997 | 2.668534e-49 | -8.615850e-47 |
| Msa0115400 | Msa0345350 | 0.835837 | 1.329734e-56 | -8.615850e-47 |
| Msa0123360 | Msa0345350 | 0.800675 | 1.289620e-48 | -8.615850e-47 |
| Msa0127020 | Msa0345350 | 0.832614 | 8.549459e-56 | -8.615850e-47 |
| Msa0129190 | Msa0345350 | -0.810428 | 1.158649e-50 | -8.615850e-47 |
| Msa0137550 | Msa0345350 | 0.864244 | 1.397540e-64 | -8.615850e-47 |
| Msa0137990 | Msa0345350 | 0.821567 | 3.769352e-53 | -8.615850e-47 |
| Msa0142980 | Msa0345350 | 0.819888 | 9.165324e-53 | -8.615850e-47 |
| Msa0144370 | Msa0345350 | 0.805253 | 1.459759e-49 | -8.615850e-47 |
| Msa0145730 | Msa0345350 | 0.823237 | 1.543148e-53 | -8.615850e-47 |
| Msa0150820 | Msa0345350 | 0.827185 | 1.798970e-54 | -8.615850e-47 |
| Msa0156370 | Msa0345350 | 0.832271 | 1.039982e-55 | -8.615850e-47 |
| Msa0159170 | Msa0345350 | 0.845239 | 4.596785e-59 | -8.615850e-47 |
| Msa0159180 | Msa0345350 | 0.812847 | 3.450876e-51 | -8.615850e-47 |
| Msa0159340 | Msa0345350 | 0.808896 | 2.472218e-50 | -8.615850e-47 |
| Msa0160550 | Msa0345350 | 0.829501 | 4.968062e-55 | -8.615850e-47 |
| Msa0162130 | Msa0345350 | 0.842472 | 2.532845e-58 | -8.615850e-47 |
| Msa0165660 | Msa0345350 | 0.821159 | 4.682438e-53 | -8.615850e-47 |
| Msa0168230 | Msa0345350 | 0.831273 | 1.832371e-55 | -8.615850e-47 |
| Msa0169280 | Msa0345350 | 0.830564 | 2.736169e-55 | -8.615850e-47 |
| Msa0172070 | Msa0345350 | 0.803289 | 3.742799e-49 | -8.615850e-47 |
| Msa0172970 | Msa0345350 | 0.846883 | 1.642001e-59 | -8.615850e-47 |
| Msa0178800 | Msa0345350 | 0.803453 | 3.461646e-49 | -8.615850e-47 |
| Msa0183900 | Msa0345350 | 0.815595 | 8.530300e-52 | -8.615850e-47 |
| Msa0189300 | Msa0345350 | 0.862666 | 4.313143e-64 | -8.615850e-47 |
| Msa0189520 | Msa0345350 | 0.825450 | 4.656259e-54 | -8.615850e-47 |
| Msa0214710 | Msa0345350 | 0.808029 | 3.784599e-50 | -8.615850e-47 |
| Msa0220720 | Msa0345350 | 0.835611 | 1.516834e-56 | -8.615850e-47 |
| Msa0221960 | Msa0345350 | -0.808979 | 2.373006e-50 | -8.615850e-47 |
| Msa0228070 | Msa0345350 | 0.835523 | 1.597202e-56 | -8.615850e-47 |
| Msa0229170 | Msa0345350 | 0.809839 | 1.551296e-50 | -8.615850e-47 |
| Msa0231660 | Msa0345350 | 0.842304 | 2.806216e-58 | -8.615850e-47 |
| Msa0232360 | Msa0345350 | 0.804866 | 1.758762e-49 | -8.615850e-47 |
| Msa0233630 | Msa0345350 | -0.810763 | 9.807413e-51 | -8.615850e-47 |
| Msa0241390 | Msa0345350 | 0.833504 | 5.135380e-56 | -8.615850e-47 |
| Msa0241470 | Msa0345350 | 0.801574 | 8.444820e-49 | -8.615850e-47 |
| Msa0256330 | Msa0345350 | 0.840725 | 7.315617e-58 | -8.615850e-47 |
| Msa0257500 | Msa0345350 | 0.800455 | 1.429647e-48 | -8.615850e-47 |
| Msa0262310 | Msa0345350 | 0.844874 | 5.770268e-59 | -8.615850e-47 |
| Msa0271530 | Msa0345350 | 0.800324 | 1.520651e-48 | -8.615850e-47 |
| Msa0271890 | Msa0345350 | 0.804948 | 1.690818e-49 | -8.615850e-47 |
| Msa0279220 | Msa0345350 | 0.849539 | 3.030381e-60 | -8.615850e-47 |
| Msa0279240 | Msa0345350 | 0.870796 | 1.112836e-66 | -8.615850e-47 |
| Msa0295330 | Msa0345350 | 0.835707 | 1.434446e-56 | -8.615850e-47 |
| Msa0299870 | Msa0345350 | 0.830608 | 2.668360e-55 | -8.615850e-47 |
| Msa0309750 | Msa0345350 | 0.850337 | 1.812845e-60 | -8.615850e-47 |
| Msa0310860 | Msa0345350 | 0.807945 | 3.944121e-50 | -8.615850e-47 |
| Msa0318980 | Msa0345350 | 0.855312 | 6.865897e-62 | -8.615850e-47 |
| Msa0335060 | Msa0345350 | 0.829421 | 5.195435e-55 | -8.615850e-47 |
| Msa0337240 | Msa0345350 | 0.828616 | 8.144840e-55 | -8.615850e-47 |
| Msa0337650 | Msa0345350 | 0.837502 | 5.004563e-57 | -8.615850e-47 |
| Msa0344540 | Msa0345350 | 0.815989 | 6.966557e-52 | -8.615850e-47 |
| Msa0345350 | Msa0345390 | 0.947604 | 4.868306e-106 | -8.615850e-47 |
| Msa0345350 | Msa0351990 | 0.805703 | 1.174677e-49 | -8.615850e-47 |
| Msa0345350 | Msa0357900 | 0.823869 | 1.098245e-53 | -8.615850e-47 |
| Msa0345350 | Msa0358860 | 0.844986 | 5.381571e-59 | -8.615850e-47 |
| Msa0345350 | Msa0366890 | 0.830395 | 3.008650e-55 | -8.615850e-47 |
| Msa0345350 | Msa0383800 | 0.848881 | 4.620131e-60 | -8.615850e-47 |
| Msa0345350 | Msa0385490 | 0.822002 | 2.990083e-53 | -8.615850e-47 |
| Msa0345350 | Msa0385580 | 0.852427 | 4.650088e-61 | -8.615850e-47 |
| Msa0345350 | Msa0388700 | 0.865034 | 7.908997e-65 | -8.615850e-47 |
| Msa0345350 | Msa0388950 | 0.801510 | 8.704528e-49 | -8.615850e-47 |
| Msa0345350 | Msa0395890 | 0.834072 | 3.701669e-56 | -8.615850e-47 |
| Msa0345350 | Msa0397070 | 0.811187 | 7.937322e-51 | -8.615850e-47 |
| Msa0345350 | Msa0397540 | 0.902468 | 9.396647e-79 | -8.615850e-47 |
| Msa0345350 | Msa0398950 | 0.804868 | 1.757131e-49 | -8.615850e-47 |
| Msa0345350 | Msa0402790 | 0.823632 | 1.247852e-53 | -8.615850e-47 |
| Msa0345350 | Msa0421500 | 0.806667 | 7.359390e-50 | -8.615850e-47 |
| Msa0345350 | Msa0434180 | 0.854227 | 1.416026e-61 | -8.615850e-47 |
| Msa0345350 | Msa0447220 | 0.809727 | 1.640394e-50 | -8.615850e-47 |
| Msa0345350 | Msa0457510 | 0.824744 | 6.838100e-54 | -8.615850e-47 |
| Msa0345350 | Msa0458060 | 0.810949 | 8.937389e-51 | -8.615850e-47 |
| Msa0345350 | Msa0465550 | 0.803609 | 3.212921e-49 | -8.615850e-47 |
| Msa0345350 | Msa0467380 | 0.833689 | 4.617438e-56 | -8.615850e-47 |
| Msa0345350 | Msa0481280 | 0.832302 | 1.021615e-55 | -8.615850e-47 |
| Msa0345350 | Msa0482130 | 0.860678 | 1.747174e-63 | -8.615850e-47 |
| Msa0345350 | Msa0492530 | 0.826056 | 3.343990e-54 | -8.615850e-47 |
| Msa0345350 | Msa0493410 | 0.837453 | 5.153257e-57 | -8.615850e-47 |
| Msa0345350 | Msa0497210 | 0.832775 | 7.799688e-56 | -8.615850e-47 |
| Msa0345350 | Msa0504020 | 0.800144 | 1.654360e-48 | -8.615850e-47 |
| Msa0345350 | Msa0510350 | 0.814493 | 1.497994e-51 | -8.615850e-47 |
| Msa0345350 | Msa0512340 | 0.815844 | 7.504749e-52 | -8.615850e-47 |
| Msa0345350 | Msa0529890 | 0.800217 | 1.598423e-48 | -8.615850e-47 |
| Msa0345350 | Msa0534900 | 0.831738 | 1.407875e-55 | -8.615850e-47 |
| Msa0345350 | Msa0539410 | 0.812462 | 4.188007e-51 | -8.615850e-47 |
| Msa0345350 | Msa0541360 | 0.807256 | 5.524350e-50 | -8.615850e-47 |
| Msa0345350 | Msa0542090 | 0.860292 | 2.286595e-63 | -8.615850e-47 |
| Msa0345350 | Msa0542130 | 0.858345 | 8.781380e-63 | -8.615850e-47 |
| Msa0345350 | Msa0548240 | 0.836380 | 9.681273e-57 | -8.615850e-47 |
| Msa0345350 | Msa0550120 | 0.801378 | 9.260865e-49 | -8.615850e-47 |
| Msa0345350 | Msa0554290 | 0.814228 | 1.714150e-51 | -8.615850e-47 |
| Msa0345350 | Msa0555450 | 0.836180 | 1.088526e-56 | -8.615850e-47 |
| Msa0345350 | Msa0556060 | 0.810969 | 8.848029e-51 | -8.615850e-47 |
| Msa0345350 | Msa0566100 | 0.813061 | 3.096859e-51 | -8.615850e-47 |
| Msa0345350 | Msa0581280 | 0.825406 | 4.768804e-54 | -8.615850e-47 |
| Msa0345350 | Msa0588260 | 0.827822 | 1.265226e-54 | -8.615850e-47 |
| Msa0345350 | Msa0592440 | 0.834801 | 2.428773e-56 | -8.615850e-47 |
| Msa0345350 | Msa0602390 | 0.800846 | 1.190136e-48 | -8.615850e-47 |
| Msa0345350 | Msa0605000 | 0.831540 | 1.575581e-55 | -8.615850e-47 |
| Msa0345350 | Msa0605650 | 0.820770 | 5.755583e-53 | -8.615850e-47 |
| Msa0345350 | Msa0608500 | 0.811295 | 7.521435e-51 | -8.615850e-47 |
| Msa0345350 | Msa0610430 | 0.827181 | 1.802971e-54 | -8.615850e-47 |
| Msa0345350 | Msa0615440 | 0.813997 | 1.928044e-51 | -8.615850e-47 |
| Msa0345350 | Msa0615490 | 0.817554 | 3.105682e-52 | -8.615850e-47 |
| Msa0345350 | Msa0617640 | 0.822027 | 2.950641e-53 | -8.615850e-47 |
| Msa0345350 | Msa0620890 | 0.826236 | 3.030041e-54 | -8.615850e-47 |
| Msa0345350 | Msa0621640 | 0.807822 | 4.190254e-50 | -8.615850e-47 |
| Msa0345350 | Msa0623790 | 0.804334 | 2.271034e-49 | -8.615850e-47 |
| Msa0345350 | Msa0625680 | 0.809774 | 1.602228e-50 | -8.615850e-47 |
| Msa0345350 | Msa0631350 | 0.823489 | 1.347450e-53 | -8.615850e-47 |
| Msa0345350 | Msa0634890 | 0.819424 | 1.170042e-52 | -8.615850e-47 |
| Msa0345350 | Msa0635550 | 0.805036 | 1.620639e-49 | -8.615850e-47 |
| Msa0345350 | Msa0643560 | 0.814552 | 1.453996e-51 | -8.615850e-47 |
| Msa0345350 | Msa0646580 | 0.806904 | 6.559389e-50 | -8.615850e-47 |
| Msa0345350 | Msa0647500 | 0.810671 | 1.026348e-50 | -8.615850e-47 |
| Msa0345350 | Msa0648780 | 0.825431 | 4.705659e-54 | -8.615850e-47 |
| Msa0345350 | Msa0649490 | 0.814312 | 1.642322e-51 | -8.615850e-47 |
| Msa0345350 | Msa0660490 | 0.858816 | 6.351658e-63 | -8.615850e-47 |
| Msa0345350 | Msa0661210 | 0.832444 | 9.419759e-56 | -8.615850e-47 |
| Msa0345350 | Msa0672550 | 0.815758 | 7.847174e-52 | -8.615850e-47 |
| Msa0345350 | Msa0675410 | 0.818078 | 2.364467e-52 | -8.615850e-47 |
| Msa0345350 | Msa0683600 | 0.801795 | 7.606238e-49 | -8.615850e-47 |
| Msa0345350 | Msa0685140 | 0.848804 | 4.854209e-60 | -8.615850e-47 |
| Msa0345350 | Msa0688960 | 0.809816 | 1.569767e-50 | -8.615850e-47 |
| Msa0345350 | Msa0689260 | 0.862780 | 3.977471e-64 | -8.615850e-47 |
| Msa0345350 | Msa0692830 | 0.867397 | 1.410820e-65 | -8.615850e-47 |
| Msa0345350 | Msa0692950 | 0.853062 | 3.061677e-61 | -8.615850e-47 |
| Msa0345350 | Msa0698490 | 0.817230 | 3.673114e-52 | -8.615850e-47 |
| Msa0345350 | Msa0698540 | 0.848689 | 5.223685e-60 | -8.615850e-47 |
| Msa0345350 | Msa0698660 | 0.814792 | 1.286531e-51 | -8.615850e-47 |
| Msa0345350 | Msa0698800 | 0.803717 | 3.051774e-49 | -8.615850e-47 |
| Msa0345350 | Msa0709500 | 0.811125 | 8.184626e-51 | -8.615850e-47 |
| Msa0345350 | Msa0711780 | 0.854073 | 1.569169e-61 | -8.615850e-47 |
| Msa0345350 | Msa0715650 | 0.833988 | 3.885698e-56 | -8.615850e-47 |
| Msa0345350 | Msa0715700 | 0.835015 | 2.145107e-56 | -8.615850e-47 |
| Msa0345350 | Msa0719420 | 0.848370 | 6.400783e-60 | -8.615850e-47 |
| Msa0345350 | Msa0722020 | 0.807414 | 5.114368e-50 | -8.615850e-47 |
| Msa0345350 | Msa0741230 | 0.840666 | 7.579351e-58 | -8.615850e-47 |
| Msa0345350 | Msa0748170 | 0.816226 | 6.169145e-52 | -8.615850e-47 |
| Msa0345350 | Msa0763330 | 0.809817 | 1.568814e-50 | -8.615850e-47 |
| Msa0345350 | Msa0771720 | 0.804708 | 1.897104e-49 | -8.615850e-47 |
| Msa0345350 | Msa0772480 | 0.858468 | 8.072556e-63 | -8.615850e-47 |
| Msa0345350 | Msa0784860 | 0.831694 | 1.443581e-55 | -8.615850e-47 |
| Msa0345350 | Msa0788850 | 0.829013 | 6.528272e-55 | -8.615850e-47 |
| Msa0345350 | Msa0789680 | 0.853038 | 3.112467e-61 | -8.615850e-47 |
| Msa0345350 | Msa0790660 | -0.813936 | 1.988143e-51 | -8.615850e-47 |
| Msa0345350 | Msa0790850 | 0.812911 | 3.340158e-51 | -8.615850e-47 |
| Msa0345350 | Msa0793380 | 0.827179 | 1.804771e-54 | -8.615850e-47 |
| Msa0345350 | Msa0794670 | 0.853858 | 1.809141e-61 | -8.615850e-47 |
| Msa0345350 | Msa0798440 | 0.857530 | 1.533343e-62 | -8.615850e-47 |
| Msa0345350 | Msa0802410 | 0.865749 | 4.711224e-65 | -8.615850e-47 |
| Msa0345350 | Msa0804230 | 0.827949 | 1.179161e-54 | -8.615850e-47 |
| Msa0345350 | Msa0808270 | 0.813934 | 1.990590e-51 | -8.615850e-47 |
| Msa0345350 | Msa0817730 | 0.809416 | 1.913230e-50 | -8.615850e-47 |
| Msa0345350 | Msa0818750 | 0.821353 | 4.223905e-53 | -8.615850e-47 |
| Msa0345350 | Msa0830040 | 0.805205 | 1.493783e-49 | -8.615850e-47 |
| Msa0345350 | Msa0830540 | 0.868582 | 5.867318e-66 | -8.615850e-47 |
| Msa0345350 | Msa0842830 | 0.800784 | 1.225150e-48 | -8.615850e-47 |
| Msa0345350 | Msa0849030 | 0.828412 | 9.122034e-55 | -8.615850e-47 |
| Msa0345350 | Msa0858180 | 0.812318 | 4.504136e-51 | -8.615850e-47 |
| Msa0345350 | Msa0861860 | 0.842568 | 2.388888e-58 | -8.615850e-47 |
| Msa0345350 | Msa0867730 | 0.811940 | 5.444091e-51 | -8.615850e-47 |
| Msa0345350 | Msa0868700 | 0.814027 | 1.898947e-51 | -8.615850e-47 |
| Msa0345350 | Msa0876810 | 0.828194 | 1.029618e-54 | -8.615850e-47 |
| Msa0345350 | Msa0887250 | 0.876451 | 1.381477e-68 | -8.615850e-47 |
| Msa0345350 | Msa0900110 | 0.838697 | 2.465948e-57 | -8.615850e-47 |
| Msa0345350 | Msa0909110 | 0.805891 | 1.072375e-49 | -8.615850e-47 |
| Msa0345350 | Msa0927260 | 0.814153 | 1.780626e-51 | -8.615850e-47 |
| Msa0345350 | Msa0945440 | 0.844650 | 6.631067e-59 | -8.615850e-47 |
| Msa0345350 | Msa0945990 | 0.829063 | 6.346597e-55 | -8.615850e-47 |
| Msa0345350 | Msa0956410 | 0.810572 | 1.078474e-50 | -8.615850e-47 |
| Msa0345350 | Msa0964060 | 0.801345 | 9.409439e-49 | -8.615850e-47 |
| Msa0345350 | Msa0966010 | 0.828736 | 7.614938e-55 | -8.615850e-47 |
| Msa0345350 | Msa0969630 | 0.804277 | 2.333072e-49 | -8.615850e-47 |
| Msa0345350 | Msa0971020 | 0.811420 | 7.065007e-51 | -8.615850e-47 |
| Msa0345350 | Msa0987370 | 0.847860 | 8.851596e-60 | -8.615850e-47 |
| Msa0345350 | Msa0989540 | 0.854679 | 1.048243e-61 | -8.615850e-47 |
| Msa0345350 | Msa0999970 | 0.832546 | 8.889560e-56 | -8.615850e-47 |
| Msa0345350 | Msa1006840 | 0.822848 | 1.901415e-53 | -8.615850e-47 |
| Msa0345350 | Msa1008720 | 0.807993 | 3.852716e-50 | -8.615850e-47 |
| Msa0345350 | Msa1009820 | 0.847778 | 9.321602e-60 | -8.615850e-47 |
| Msa0345350 | Msa1012830 | 0.821571 | 3.761783e-53 | -8.615850e-47 |
| Msa0345350 | Msa1021520 | 0.827346 | 1.646073e-54 | -8.615850e-47 |
| Msa0345350 | Msa1030620 | 0.849515 | 3.077135e-60 | -8.615850e-47 |
| Msa0345350 | Msa1037420 | 0.830482 | 2.864974e-55 | -8.615850e-47 |
| Msa0345350 | Msa1051200 | 0.856871 | 2.400079e-62 | -8.615850e-47 |
| Msa0345350 | Msa1060260 | 0.828013 | 1.138017e-54 | -8.615850e-47 |
| Msa0345350 | Msa1063510 | 0.821583 | 3.737318e-53 | -8.615850e-47 |
| Msa0345350 | Msa1064250 | 0.803803 | 2.928481e-49 | -8.615850e-47 |
| Msa0345350 | Msa1077030 | 0.835230 | 1.894105e-56 | -8.615850e-47 |
| Msa0345350 | Msa1081930 | 0.828175 | 1.040612e-54 | -8.615850e-47 |
| Msa0345350 | Msa1084470 | 0.830633 | 2.630690e-55 | -8.615850e-47 |
| Msa0345350 | Msa1087710 | 0.839094 | 1.945883e-57 | -8.615850e-47 |
| Msa0345350 | Msa1091940 | 0.852306 | 5.033192e-61 | -8.615850e-47 |
| Msa0345350 | Msa1104140 | 0.809948 | 1.470275e-50 | -8.615850e-47 |
| Msa0345350 | Msa1109680 | 0.838303 | 3.114917e-57 | -8.615850e-47 |
| Msa0345350 | Msa1115080 | 0.811407 | 7.111164e-51 | -8.615850e-47 |
| Msa0345350 | Msa1133230 | 0.804454 | 2.143689e-49 | -8.615850e-47 |
| Msa0345350 | Msa1133250 | 0.802055 | 6.727705e-49 | -8.615850e-47 |
| Msa0345350 | Msa1137700 | 0.871344 | 7.341408e-67 | -8.615850e-47 |
| Msa0345350 | Msa1138880 | 0.847020 | 1.505945e-59 | -8.615850e-47 |
| Msa0345350 | Msa1144040 | 0.823410 | 1.406086e-53 | -8.615850e-47 |
| Msa0345350 | Msa1160590 | 0.874689 | 5.550739e-68 | -8.615850e-47 |
| Msa0345350 | Msa1171360 | 0.809799 | 1.582599e-50 | -8.615850e-47 |
| Msa0345350 | Msa1172400 | 0.825889 | 3.665056e-54 | -8.615850e-47 |
| Msa0345350 | Msa1173140 | 0.832876 | 7.359460e-56 | -8.615850e-47 |
| Msa0345350 | Msa1180500 | 0.833457 | 5.275831e-56 | -8.615850e-47 |
| Msa0345350 | Msa1181250 | 0.909766 | 3.959477e-82 | -8.615850e-47 |
| Msa0345350 | Msa1181330 | 0.908504 | 1.590968e-81 | -8.615850e-47 |
| Msa0345350 | Msa1181910 | 0.827996 | 1.149103e-54 | -8.615850e-47 |
| Msa0345350 | Msa1208880 | 0.817006 | 4.123555e-52 | -8.615850e-47 |
| Msa0345350 | Msa1209200 | 0.825740 | 3.974743e-54 | -8.615850e-47 |
| Msa0345350 | Msa1209260 | 0.849379 | 3.359119e-60 | -8.615850e-47 |
| Msa0345350 | Msa1209760 | 0.835211 | 1.915253e-56 | -8.615850e-47 |
| Msa0345350 | Msa1217470 | 0.806519 | 7.906741e-50 | -8.615850e-47 |
| Msa0345350 | Msa1218500 | 0.803438 | 3.486702e-49 | -8.615850e-47 |
| Msa0345350 | Msa1219170 | 0.804033 | 2.622929e-49 | -8.615850e-47 |
| Msa0345350 | Msa1224810 | 0.841294 | 5.183906e-58 | -8.615850e-47 |
| Msa0345350 | Msa1231840 | 0.855218 | 7.312718e-62 | -8.615850e-47 |
| Msa0345350 | Msa1237630 | 0.824914 | 6.234437e-54 | -8.615850e-47 |
| Msa0345350 | Msa1237940 | 0.816860 | 4.446913e-52 | -8.615850e-47 |
| Msa0345350 | Msa1245540 | 0.803636 | 3.172181e-49 | -8.615850e-47 |
| Msa0345350 | Msa1245930 | 0.819230 | 1.295373e-52 | -8.615850e-47 |
| Msa0345350 | Msa1250790 | 0.807527 | 4.838800e-50 | -8.615850e-47 |
| Msa0345350 | Msa1253800 | 0.820669 | 6.068993e-53 | -8.615850e-47 |
| Msa0345350 | Msa1254730 | 0.833287 | 5.815873e-56 | -8.615850e-47 |
| Msa0345350 | Msa1259060 | 0.820918 | 5.321892e-53 | -8.615850e-47 |
| Msa0345350 | Msa1260130 | 0.808727 | 2.686424e-50 | -8.615850e-47 |
| Msa0345350 | Msa1265630 | 0.842096 | 3.185048e-58 | -8.615850e-47 |
| Msa0345350 | Msa1274560 | 0.814459 | 1.524164e-51 | -8.615850e-47 |
| Msa0345350 | Msa1280320 | 0.825061 | 5.755682e-54 | -8.615850e-47 |
| Msa0345350 | Msa1287460 | 0.811982 | 5.331072e-51 | -8.615850e-47 |
| Msa0345350 | Msa1294820 | 0.810741 | 9.913734e-51 | -8.615850e-47 |
| Msa0345350 | Msa1302380 | 0.806851 | 6.728358e-50 | -8.615850e-47 |
| Msa0345350 | Msa1302850 | 0.815307 | 9.885250e-52 | -8.615850e-47 |
| Msa0345350 | Msa1306920 | 0.807894 | 4.044556e-50 | -8.615850e-47 |
| Msa0345350 | Msa1312520 | 0.840736 | 7.263626e-58 | -8.615850e-47 |
| Msa0345350 | Msa1313140 | 0.801429 | 9.042284e-49 | -8.615850e-47 |
| Msa0345350 | Msa1327510 | 0.803163 | 3.974260e-49 | -8.615850e-47 |
| Msa0345350 | Msa1332590 | 0.847335 | 1.234208e-59 | -8.615850e-47 |
| Msa0345350 | Msa1351540 | 0.813296 | 2.749890e-51 | -8.615850e-47 |
| Msa0345350 | Msa1358250 | 0.863397 | 2.563638e-64 | -8.615850e-47 |
| Msa0345350 | Msa1359630 | 0.834701 | 2.573942e-56 | -8.615850e-47 |
| Msa0345350 | Msa1360140 | 0.816601 | 5.085045e-52 | -8.615850e-47 |
| Msa0345350 | Msa1368060 | 0.804984 | 1.661348e-49 | -8.615850e-47 |
| Msa0345350 | Msa1385770 | 0.808477 | 3.038797e-50 | -8.615850e-47 |
| Msa0345350 | Msa1386780 | 0.823249 | 1.533467e-53 | -8.615850e-47 |
| Msa0345350 | Msa1388860 | 0.805080 | 1.586500e-49 | -8.615850e-47 |
| Msa0345350 | Msa1389800 | 0.810593 | 1.067325e-50 | -8.615850e-47 |
| Msa0345350 | Msa1392780 | 0.880722 | 4.342241e-70 | -8.615850e-47 |
| Msa0345350 | Msa1394290 | 0.866310 | 3.131496e-65 | -8.615850e-47 |
| Msa0345350 | Msa1394500 | 0.802939 | 4.421174e-49 | -8.615850e-47 |
| Msa0345350 | Msa1400220 | 0.842191 | 3.006567e-58 | -8.615850e-47 |
| Msa0345350 | Msa1400580 | 0.829601 | 4.698682e-55 | -8.615850e-47 |
| Msa0345350 | Msa1403340 | 0.827347 | 1.644929e-54 | -8.615850e-47 |
| Msa0345350 | Msa1403420 | 0.802975 | 4.346331e-49 | -8.615850e-47 |
| Msa0345350 | Msa1409240 | 0.808085 | 3.682955e-50 | -8.615850e-47 |
| Msa0345350 | Msa1411750 | 0.800809 | 1.210745e-48 | -8.615850e-47 |
| Msa0345350 | Msa1419870 | 0.863040 | 3.305620e-64 | -8.615850e-47 |
| Msa0345350 | Msa1432420 | 0.841076 | 5.916024e-58 | -8.615850e-47 |
| Msa0345350 | Msa1435390 | 0.821915 | 3.131926e-53 | -8.615850e-47 |
| Msa0345350 | Msa1436520 | 0.836627 | 8.376938e-57 | -8.615850e-47 |
| Msa0345350 | Msa1439550 | 0.837498 | 5.015974e-57 | -8.615850e-47 |
| Msa0345350 | Msa1440930 | 0.832813 | 7.629410e-56 | -8.615850e-47 |
| Msa0345350 | Msa1444310 | 0.829286 | 5.604995e-55 | -8.615850e-47 |
| Msa0345350 | Msa1454480 | 0.832936 | 7.110978e-56 | -8.615850e-47 |
| Msa0345350 | Msa1454680 | 0.810727 | 9.981184e-51 | -8.615850e-47 |
| Msa0345350 | Msa1457920 | 0.870486 | 1.407152e-66 | -8.615850e-47 |
| Msa0345350 | Msa1465960 | 0.822709 | 2.049417e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345350 | MtrunA17_Chr3g0085271 | 95.029 | 342 | 15 | 1 | 1 | 340 | 1 | 342 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0345350 | AT5G48240.1 | 47.385 | 325 | 137 | 8 | 16 | 339 | 18 | 309 | 6.40e-79 | 244 |
| Msa0345350 | AT5G48240.3 | 42.391 | 368 | 139 | 8 | 16 | 339 | 18 | 356 | 3.11e-72 | 228 |
| Msa0345350 | AT5G48240.2 | 44.898 | 294 | 120 | 7 | 16 | 308 | 18 | 270 | 1.67e-60 | 196 |
Find 110 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATAGTAATAGACTATTTA+TGG | 0.119328 | 3_1:-4547857 | Msa0345350:three_prime_UTR |
| TGTCACACCTGCTAATTATT+TGG | 0.128361 | 3_1:-4550534 | Msa0345350:CDS |
| CGCTGAAAAGAAGGCTTCTT+TGG | 0.194609 | 3_1:+4549137 | None:intergenic |
| TCCGATGAAGATTAAGGTTT+TGG | 0.216920 | 3_1:-4548114 | Msa0345350:exon |
| ATTTATTATCCAATTGTATT+AGG | 0.249954 | 3_1:-4547891 | Msa0345350:three_prime_UTR |
| TCAGTGAACAAATTCAAAAT+TGG | 0.269250 | 3_1:+4547946 | None:intergenic |
| ATAAAAGTTCCGCATCAAAA+TGG | 0.296914 | 3_1:+4547788 | None:intergenic |
| CTACCAAACTTCCTCTTTCC+CGG | 0.300063 | 3_1:+4551356 | None:intergenic |
| TGTGGTGGCTTCATCACTTT+TGG | 0.308341 | 3_1:+4551302 | None:intergenic |
| CTTCATCGGAACTGCTATCT+TGG | 0.315922 | 3_1:+4548127 | None:intergenic |
| GTGAAGGTTGTAAAGCATTC+AGG | 0.319257 | 3_1:-4550947 | Msa0345350:CDS |
| TTGAATTATAAAACAATTCA+TGG | 0.322795 | 3_1:-4551414 | Msa0345350:exon |
| AGCAGTTCCGATGAAGATTA+AGG | 0.322931 | 3_1:-4548120 | Msa0345350:exon |
| CTTCTTTATAATACTCTTGA+AGG | 0.329380 | 3_1:+4550920 | None:intergenic |
| GAGAGGATGAACAACCTTCT+TGG | 0.339326 | 3_1:-4548323 | Msa0345350:CDS |
| CTTTGCATCCCTGTTCTTTG+AGG | 0.339480 | 3_1:+4550170 | None:intergenic |
| TCACTGAATTTAGTAATTCC+TGG | 0.358866 | 3_1:+4550966 | None:intergenic |
| ATTATTTCGTCGTAGGGTAT+TGG | 0.363471 | 3_1:-4547751 | Msa0345350:three_prime_UTR |
| GGCTGGACCCCTCAAAGAAC+AGG | 0.375162 | 3_1:-4550179 | Msa0345350:CDS |
| TTCTGCTACCCCTTCATCTT+CGG | 0.376152 | 3_1:+4551073 | None:intergenic |
| TTTGCATCCCTGTTCTTTGA+GGG | 0.379386 | 3_1:+4550171 | None:intergenic |
| ATGGCTGATTGGCTGGCCTT+TGG | 0.383693 | 3_1:-4547979 | Msa0345350:three_prime_UTR |
| GAGCCGGGAAAGAGGAAGTT+TGG | 0.384673 | 3_1:-4551359 | Msa0345350:CDS |
| TTCATCATGTTCAATAACTT+TGG | 0.386200 | 3_1:+4547922 | None:intergenic |
| GCTGACAAGTTCGAGAATAA+AGG | 0.387185 | 3_1:-4548277 | Msa0345350:CDS |
| CGTGTTTCTAGTGGGATAAT+TGG | 0.389432 | 3_1:-4548070 | Msa0345350:three_prime_UTR |
| CTTGTTACAGCTAGCAGAAA+AGG | 0.390626 | 3_1:-4550561 | Msa0345350:intron |
| TCCCTTGTTTGTGCTTGCAT+TGG | 0.391353 | 3_1:+4548344 | None:intergenic |
| AATCATATTCCTAATACAAT+TGG | 0.407003 | 3_1:+4547882 | None:intergenic |
| TGTAAAGTTTCTTCATTTGT+TGG | 0.412234 | 3_1:+4551255 | None:intergenic |
| ACGGCGGAAGTGACAGCGGC+TGG | 0.419525 | 3_1:+4553219 | None:intergenic |
| AGTAACGTAATGAGCAGAAA+TGG | 0.420863 | 3_1:+4548026 | None:intergenic |
| AAACTTGATGGCTGATTGGC+TGG | 0.426019 | 3_1:-4547986 | Msa0345350:three_prime_UTR |
| GGAGACAGAGCGCAAGATCA+AGG | 0.426021 | 3_1:-4550741 | Msa0345350:CDS |
| CTCATTACGTTACTAAAGAA+TGG | 0.426920 | 3_1:-4548017 | Msa0345350:three_prime_UTR |
| GAGACAACTGCCCCTGCTAC+TGG | 0.429501 | 3_1:-4551191 | Msa0345350:CDS |
| GGAGAAACTTGATGGCTGAT+TGG | 0.433716 | 3_1:-4547990 | Msa0345350:three_prime_UTR |
| CTTATAAGTGTAGCGACAAA+AGG | 0.434006 | 3_1:-4550494 | Msa0345350:CDS |
| AGAGGATGAACAACCTTCTT+GGG | 0.435774 | 3_1:-4548322 | Msa0345350:CDS |
| ACGTTACTAAAGAATGGAAT+TGG | 0.440530 | 3_1:-4548011 | Msa0345350:three_prime_UTR |
| TAAAAGTTCCGCATCAAAAT+GGG | 0.444794 | 3_1:+4547789 | None:intergenic |
| GCGTTAGGGAAGCCAGCTAT+TGG | 0.445925 | 3_1:-4549117 | Msa0345350:CDS |
| TTCATCGGAACTGCTATCTT+GGG | 0.454720 | 3_1:+4548128 | None:intergenic |
| ATCACCTTTGCACCAATAGC+TGG | 0.456798 | 3_1:+4549105 | None:intergenic |
| CAAGTTCGAGAATAAAGGAT+TGG | 0.462911 | 3_1:-4548272 | Msa0345350:CDS |
| CCGAAAAGTAATCGAAAGCT+TGG | 0.464465 | 3_1:-4547826 | Msa0345350:three_prime_UTR |
| ATGGAAGTGAGCCGGGAAAG+AGG | 0.474815 | 3_1:-4551367 | Msa0345350:CDS |
| CTTCTAGTACTCCCAGTAGC+AGG | 0.475505 | 3_1:+4551179 | None:intergenic |
| TCCAAAACCTTAATCTTCAT+CGG | 0.476889 | 3_1:+4548113 | None:intergenic |
| GAGTGTTTCTGATGAGTTGT+TGG | 0.478230 | 3_1:-4550898 | Msa0345350:intron |
| ATGGAATTGGAGAAACTTGA+TGG | 0.484582 | 3_1:-4547998 | Msa0345350:three_prime_UTR |
| CTTCCCTAACGCTGAAAAGA+AGG | 0.488467 | 3_1:+4549128 | None:intergenic |
| AAAGCTCAAGTTGCTCAGAA+AGG | 0.489370 | 3_1:-4550201 | Msa0345350:CDS |
| TTCTTGTGATCTGACAATAC+TGG | 0.489621 | 3_1:+4550791 | None:intergenic |
| TTTAGTATTATTTCGTCGTA+GGG | 0.489691 | 3_1:-4547757 | Msa0345350:three_prime_UTR |
| TGAACAAATTCAAAATTGGT+TGG | 0.491540 | 3_1:+4547950 | None:intergenic |
| AATTGGTTGGTTTATACCAA+AGG | 0.494286 | 3_1:+4547963 | None:intergenic |
| ATTTAGTATTATTTCGTCGT+AGG | 0.496791 | 3_1:-4547758 | Msa0345350:three_prime_UTR |
| AAGCTCAAGTTGCTCAGAAA+GGG | 0.498953 | 3_1:-4550200 | Msa0345350:CDS |
| AGCATATAATTATCGCGTAA+TGG | 0.502059 | 3_1:+4548297 | None:intergenic |
| GAAGTGACAGCGGCTGGGAA+AGG | 0.502170 | 3_1:+4553225 | None:intergenic |
| AAGTTCGAGAATAAAGGATT+GGG | 0.504352 | 3_1:-4548271 | Msa0345350:CDS |
| GTTGAGCATGGAAGTGAGCC+GGG | 0.505266 | 3_1:-4551374 | Msa0345350:CDS |
| TATAGAAAAGCTCGCGGAAG+AGG | 0.510403 | 3_1:-4550762 | Msa0345350:CDS |
| CTCAAAGAACAGGGATGCAA+AGG | 0.511691 | 3_1:-4550169 | Msa0345350:CDS |
| GAAGATCTATCCGAAGATGA+AGG | 0.518592 | 3_1:-4551083 | Msa0345350:CDS |
| TTGCATCCCTGTTCTTTGAG+GGG | 0.522520 | 3_1:+4550172 | None:intergenic |
| GAGGAGGATGAGATTCAGCC+AGG | 0.523349 | 3_1:-4550984 | Msa0345350:CDS |
| GGTTGAGCATGGAAGTGAGC+CGG | 0.523486 | 3_1:-4551375 | Msa0345350:CDS |
| TTGTTACAGCTAGCAGAAAA+GGG | 0.523614 | 3_1:-4550560 | Msa0345350:intron |
| TTCTAGTACTCCCAGTAGCA+GGG | 0.533288 | 3_1:+4551180 | None:intergenic |
| AGACAACTGCCCCTGCTACT+GGG | 0.534405 | 3_1:-4551190 | Msa0345350:CDS |
| GGCCAATGCAAGCACAAACA+AGG | 0.534686 | 3_1:-4548346 | Msa0345350:CDS |
| GAAGAAAGGTTACCAGATGA+TGG | 0.535508 | 3_1:+4553144 | None:intergenic |
| TGCGCGTCCAAATAATTAGC+AGG | 0.542869 | 3_1:+4550527 | None:intergenic |
| GAGACAGAGCGCAAGATCAA+GGG | 0.544740 | 3_1:-4550740 | Msa0345350:CDS |
| TCAAGTTGCTCAGAAAGGGC+TGG | 0.553946 | 3_1:-4550196 | Msa0345350:CDS |
| AAGATCTATCCGAAGATGAA+GGG | 0.556404 | 3_1:-4551082 | Msa0345350:CDS |
| ACTTTCTTCTGTCCGTGTGG+TGG | 0.558848 | 3_1:+4551287 | None:intergenic |
| CAGCATCAGCGTGTTTCTAG+TGG | 0.559433 | 3_1:-4548079 | Msa0345350:three_prime_UTR |
| GAAACACAAGTGGTTGAGCA+TGG | 0.561474 | 3_1:-4551386 | Msa0345350:CDS |
| CTCTGAGGATGAAGATGATG+AGG | 0.568128 | 3_1:-4551003 | Msa0345350:CDS |
| CGGGAAAGAGGAAGTTTGGT+AGG | 0.576418 | 3_1:-4551355 | Msa0345350:CDS |
| TCGCGTAATGGAGCCCAAGA+AGG | 0.580268 | 3_1:+4548309 | None:intergenic |
| TCAAAGAACAGGGATGCAAA+GGG | 0.580392 | 3_1:-4550168 | Msa0345350:intron |
| GGAATTACTAAATTCAGTGA+AGG | 0.581563 | 3_1:-4550963 | Msa0345350:CDS |
| CGGCGGAAGTGACAGCGGCT+GGG | 0.582939 | 3_1:+4553220 | None:intergenic |
| GAAGCCAGCTATTGGTGCAA+AGG | 0.585865 | 3_1:-4549109 | Msa0345350:intron |
| CAGTTATCACAAACTCTCAA+CGG | 0.590260 | 3_1:-4553187 | Msa0345350:five_prime_UTR |
| GAAGATGAAGGGGTAGCAGA+AGG | 0.603387 | 3_1:-4551071 | Msa0345350:CDS |
| AGCATCAGCGTGTTTCTAGT+GGG | 0.603770 | 3_1:-4548078 | Msa0345350:three_prime_UTR |
| GCCAATGCAAGCACAAACAA+GGG | 0.604219 | 3_1:-4548345 | Msa0345350:CDS |
| TGCAAGCACAAACAAGGGAG+AGG | 0.605005 | 3_1:-4548340 | Msa0345350:CDS |
| TTAACTTTCTTCTGTCCGTG+TGG | 0.619849 | 3_1:+4551284 | None:intergenic |
| ATAAGTGTAGCGACAAAAGG+AGG | 0.628567 | 3_1:-4550491 | Msa0345350:intron |
| GTGATAACTGTAGAGATGAA+CGG | 0.638571 | 3_1:+4553200 | None:intergenic |
| GTGGCATCTATGAAGACTAG+AGG | 0.647773 | 3_1:-4551155 | Msa0345350:CDS |
| AGATCTATCCGAAGATGAAG+GGG | 0.651704 | 3_1:-4551081 | Msa0345350:CDS |
| AGGAAGTTTGGTAGGAACCA+AGG | 0.652606 | 3_1:-4551347 | Msa0345350:CDS |
| ATGAACGGCGGAAGTGACAG+CGG | 0.654528 | 3_1:+4553215 | None:intergenic |
| TAAGAAAGTTAATTTCTCTG+AGG | 0.655143 | 3_1:-4551018 | Msa0345350:CDS |
| TCTAGTACTCCCAGTAGCAG+GGG | 0.660080 | 3_1:+4551181 | None:intergenic |
| TGAGGATGAAGATGATGAGG+AGG | 0.663150 | 3_1:-4551000 | Msa0345350:CDS |
| TACTGGGAGTACTAGAAGTG+TGG | 0.666406 | 3_1:-4551174 | Msa0345350:CDS |
| CATGGCTGAAGAAACACAAG+TGG | 0.666963 | 3_1:-4551396 | Msa0345350:CDS |
| GCTGGACCCCTCAAAGAACA+GGG | 0.672553 | 3_1:-4550178 | Msa0345350:CDS |
| AAAGTGATGAAGCCACCACA+CGG | 0.690683 | 3_1:-4551299 | Msa0345350:CDS |
| TCTTGTTATAGAAAAGCTCG+CGG | 0.691844 | 3_1:-4550768 | Msa0345350:CDS |
| AGGTTGTAAAGCATTCAGGA+TGG | 0.710807 | 3_1:-4550943 | Msa0345350:CDS |
| ATAACTGTAGAGATGAACGG+CGG | 0.780829 | 3_1:+4553203 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATGAAATTAAGAAA+GGG | + | chr3_1:4547825-4547844 | None:intergenic | 10.0% |
| !! | TTATTAGAGAAATAAAAAAT+TGG | - | chr3_1:4550099-4550118 | Msa0345350:intron | 10.0% |
| !!! | AAGTTTTCTATTTTAAAAAT+AGG | + | chr3_1:4551165-4551184 | None:intergenic | 10.0% |
| !! | ATTAATTATCTAAAAAACAT+TGG | + | chr3_1:4551401-4551420 | None:intergenic | 10.0% |
| !! | AATATATGAAATTAAGAAAG+GGG | + | chr3_1:4547824-4547843 | None:intergenic | 15.0% |
| !! | GAAATATATGAAATTAAGAA+AGG | + | chr3_1:4547826-4547845 | None:intergenic | 15.0% |
| !!! | TTTTATTCTGGTTTTTTTTT+TGG | - | chr3_1:4547876-4547895 | Msa0345350:three_prime_UTR | 15.0% |
| !! | AAATTGAGATTAAAAATGAT+AGG | + | chr3_1:4548237-4548256 | None:intergenic | 15.0% |
| !! | TTGAATTATAAAACAATTCA+TGG | - | chr3_1:4549528-4549547 | Msa0345350:intron | 15.0% |
| !!! | TTTCTTTTTCTTTTAAATAG+AGG | - | chr3_1:4550482-4550501 | Msa0345350:intron | 15.0% |
| !! | GATTATCATTATTAAATTGA+AGG | - | chr3_1:4550691-4550710 | Msa0345350:intron | 15.0% |
| !! | TTCTTTAATAATAAAACTTG+AGG | - | chr3_1:4551118-4551137 | Msa0345350:CDS | 15.0% |
| !!! | CTTTAAAAAAAATGAATTGA+AGG | + | chr3_1:4551317-4551336 | None:intergenic | 15.0% |
| !!! | TCAATTCATTTTTTTTAAAG+AGG | - | chr3_1:4551317-4551336 | Msa0345350:CDS | 15.0% |
| !! | CAACAATTAAATACTTAAAT+AGG | + | chr3_1:4551596-4551615 | None:intergenic | 15.0% |
| !! | TTTAATTGTTGAAAAATAAG+AGG | - | chr3_1:4551605-4551624 | Msa0345350:intron | 15.0% |
| !! | TTAATTGTTGAAAAATAAGA+GGG | - | chr3_1:4551606-4551625 | Msa0345350:intron | 15.0% |
| !! | AATAAATAGAGTAAATGATT+TGG | + | chr3_1:4552000-4552019 | None:intergenic | 15.0% |
| !!! | TAACTTTAAAATAAACTTAC+TGG | + | chr3_1:4552708-4552727 | None:intergenic | 15.0% |
| !! | ATTTATTATCCAATTGTATT+AGG | - | chr3_1:4553051-4553070 | Msa0345350:intron | 15.0% |
| !! | ATATATGAAATTAAGAAAGG+GGG | + | chr3_1:4547823-4547842 | None:intergenic | 20.0% |
| !!! | TTCATATATTTCACCAATTT+TGG | - | chr3_1:4547834-4547853 | Msa0345350:three_prime_UTR | 20.0% |
| !!! | CTCATCTTTTTTTTTTATTC+TGG | - | chr3_1:4547864-4547883 | Msa0345350:three_prime_UTR | 20.0% |
| !! | GTGTTTAATGTATATTTGAT+TGG | - | chr3_1:4547898-4547917 | Msa0345350:three_prime_UTR | 20.0% |
| !!! | ATTTTGATTTTATTGGAATG+TGG | - | chr3_1:4547980-4547999 | Msa0345350:three_prime_UTR | 20.0% |
| !! | TTTCATACTTATAAGTTCAT+AGG | - | chr3_1:4548378-4548397 | Msa0345350:intron | 20.0% |
| !!! | TTTTTATAAAACTTGGTATC+CGG | + | chr3_1:4548669-4548688 | None:intergenic | 20.0% |
| !! | AAATATTGAAAACCTTAATG+TGG | - | chr3_1:4548717-4548736 | Msa0345350:intron | 20.0% |
| !!! | TGGTCTTAAAAAAATGTTTA+CGG | + | chr3_1:4548758-4548777 | None:intergenic | 20.0% |
| !!! | ATTGTTATTACCATCTTTTA+GGG | - | chr3_1:4548780-4548799 | Msa0345350:intron | 20.0% |
| !! | ATTGTTTAAGGAATTAAAAG+AGG | - | chr3_1:4548963-4548982 | Msa0345350:intron | 20.0% |
| !!! | ATTTGTGAATTTTGTTAAGA+AGG | - | chr3_1:4549074-4549093 | Msa0345350:intron | 20.0% |
| !!! | TTTGTGAATTTTGTTAAGAA+GGG | - | chr3_1:4549075-4549094 | Msa0345350:intron | 20.0% |
| !! | ATCTATATGATGATAAGTTT+AGG | + | chr3_1:4549147-4549166 | None:intergenic | 20.0% |
| !! | ATCAGTTAAATTAGTAAGTA+AGG | - | chr3_1:4549199-4549218 | Msa0345350:intron | 20.0% |
| !! | TGAAAATTGAATTCGTATTT+CGG | + | chr3_1:4549330-4549349 | None:intergenic | 20.0% |
| !!! | CATAAATTTTAGTGCTAATT+GGG | + | chr3_1:4550291-4550310 | None:intergenic | 20.0% |
| !!! | ACATAAATTTTAGTGCTAAT+TGG | + | chr3_1:4550292-4550311 | None:intergenic | 20.0% |
| !! | TAGACCAAAATATTATCTAT+CGG | - | chr3_1:4550328-4550347 | Msa0345350:intron | 20.0% |
| !! | AAACAAAATTTGCAAATGTT+AGG | + | chr3_1:4550635-4550654 | None:intergenic | 20.0% |
| !!! | TTTCAGTTTATCTTTTATAC+AGG | - | chr3_1:4550916-4550935 | Msa0345350:CDS | 20.0% |
| !!! | TTCAGTTTATCTTTTATACA+GGG | - | chr3_1:4550917-4550936 | Msa0345350:CDS | 20.0% |
| !! | TACTTATTAAGGTGATTATA+GGG | + | chr3_1:4551209-4551228 | None:intergenic | 20.0% |
| !! | TTACTTATTAAGGTGATTAT+AGG | + | chr3_1:4551210-4551229 | None:intergenic | 20.0% |
| !! | CAAATTAGATAGTAAGAATT+GGG | + | chr3_1:4551757-4551776 | None:intergenic | 20.0% |
| !! | ACAAATTAGATAGTAAGAAT+TGG | + | chr3_1:4551758-4551777 | None:intergenic | 20.0% |
| !!! | TCTGTTGATAATAACTAATT+AGG | - | chr3_1:4551906-4551925 | Msa0345350:intron | 20.0% |
| !!! | CATTCAACTTATATACATTT+TGG | + | chr3_1:4551970-4551989 | None:intergenic | 20.0% |
| !!! | TCTTTCATTTTTCGAATAAA+GGG | + | chr3_1:4552057-4552076 | None:intergenic | 20.0% |
| !!! | TTCTTTCATTTTTCGAATAA+AGG | + | chr3_1:4552058-4552077 | None:intergenic | 20.0% |
| !! | TGCATTTAAATTCAGAAAAT+CGG | + | chr3_1:4552129-4552148 | None:intergenic | 20.0% |
| !!! | ACAATAGAACAATTTTAAAG+TGG | + | chr3_1:4552286-4552305 | None:intergenic | 20.0% |
| !! | AATCATATTCCTAATACAAT+TGG | + | chr3_1:4553063-4553082 | None:intergenic | 20.0% |
| !! | CTATAGTAATAGACTATTTA+TGG | - | chr3_1:4553085-4553104 | Msa0345350:intron | 20.0% |
| !!! | GTTTTAGATTGTAATCATTC+AGG | + | chr3_1:4548050-4548069 | None:intergenic | 25.0% |
| !! | AATCTCAATTTTACCTTTGT+AGG | - | chr3_1:4548246-4548265 | Msa0345350:intron | 25.0% |
| ! | AAAATCAATTAAGCCTACAA+AGG | + | chr3_1:4548262-4548281 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAAACTGCAGCT+AGG | - | chr3_1:4548694-4548713 | Msa0345350:intron | 25.0% |
| ! | AAAGATGGTAATAACAATCA+TGG | + | chr3_1:4548778-4548797 | None:intergenic | 25.0% |
| !!! | GATTGTTATTACCATCTTTT+AGG | - | chr3_1:4548779-4548798 | Msa0345350:intron | 25.0% |
| ! | TTCCTTAAACAATGTTCTTA+GGG | + | chr3_1:4548956-4548975 | None:intergenic | 25.0% |
| ! | ATTCCTTAAACAATGTTCTT+AGG | + | chr3_1:4548957-4548976 | None:intergenic | 25.0% |
| ! | GTTAAATTAGTAAGTAAGGT+AGG | - | chr3_1:4549203-4549222 | Msa0345350:intron | 25.0% |
| !!! | TTCAACAACGTAAGTTTTAT+TGG | + | chr3_1:4549297-4549316 | None:intergenic | 25.0% |
| ! | TTAGCAGAAAAATATAGACT+CGG | + | chr3_1:4549380-4549399 | None:intergenic | 25.0% |
| !! | GTTTCTTACTTGACTTTTTA+CGG | + | chr3_1:4549621-4549640 | None:intergenic | 25.0% |
| ! | TGTAAAGTTTCTTCATTTGT+TGG | + | chr3_1:4549690-4549709 | None:intergenic | 25.0% |
| ! | TAAGAAAGTTAATTTCTCTG+AGG | - | chr3_1:4549924-4549943 | Msa0345350:intron | 25.0% |
| ! | CTTCTTTATAATACTCTTGA+AGG | + | chr3_1:4550025-4550044 | None:intergenic | 25.0% |
| ! | TAAACTTGAACAACTCTATA+GGG | - | chr3_1:4550127-4550146 | Msa0345350:intron | 25.0% |
| !!! | ATATTTTGGTCTACGATAAT+TGG | + | chr3_1:4550321-4550340 | None:intergenic | 25.0% |
| ! | AGACCAAAATATTATCTATC+GGG | - | chr3_1:4550329-4550348 | Msa0345350:intron | 25.0% |
| !! | TTACCCGATAGATAATATTT+TGG | + | chr3_1:4550335-4550354 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGGAATCTCATT+TGG | - | chr3_1:4550883-4550902 | Msa0345350:intron | 25.0% |
| ! | AAGAAAAAGGAATCTCATTT+GGG | - | chr3_1:4550884-4550903 | Msa0345350:intron | 25.0% |
| ! | AAATAGAAAACTTAAGAGTC+AGG | - | chr3_1:4551172-4551191 | Msa0345350:CDS | 25.0% |
| ! | TGAGAGAAGTTTACTTATTA+AGG | + | chr3_1:4551220-4551239 | None:intergenic | 25.0% |
| ! | ACGATGTGTTAAAAAAAATG+TGG | + | chr3_1:4551262-4551281 | None:intergenic | 25.0% |
| ! | GTTTACTGAGGTTTAAAAAA+AGG | + | chr3_1:4551362-4551381 | None:intergenic | 25.0% |
| ! | AAAATCAGTGTTATCAATAG+AGG | + | chr3_1:4551493-4551512 | None:intergenic | 25.0% |
| !!! | ATATGATGTTCTAAGAATGA+GGG | - | chr3_1:4551552-4551571 | Msa0345350:intron | 25.0% |
| !!! | GCAAACATTTTGAGTATATT+AGG | + | chr3_1:4551735-4551754 | None:intergenic | 25.0% |
| ! | ACCTCTAAATTAATGTGATA+TGG | - | chr3_1:4552218-4552237 | Msa0345350:intron | 25.0% |
| ! | TCCATATCACATTAATTTAG+AGG | + | chr3_1:4552222-4552241 | None:intergenic | 25.0% |
| !! | TCCAAGCAATTTGATAATTA+GGG | + | chr3_1:4552564-4552583 | None:intergenic | 25.0% |
| !! | ATCCAAGCAATTTGATAATT+AGG | + | chr3_1:4552565-4552584 | None:intergenic | 25.0% |
| ! | ATTATCAAATTGCTTGGATT+TGG | - | chr3_1:4552566-4552585 | Msa0345350:intron | 25.0% |
| !!! | TAAGGTTTTGGAAATTGAAA+AGG | - | chr3_1:4552840-4552859 | Msa0345350:intron | 25.0% |
| ! | TGAACAAATTCAAAATTGGT+TGG | + | chr3_1:4552995-4553014 | None:intergenic | 25.0% |
| ! | TCAGTGAACAAATTCAAAAT+TGG | + | chr3_1:4552999-4553018 | None:intergenic | 25.0% |
| ! | TTCATCATGTTCAATAACTT+TGG | + | chr3_1:4553023-4553042 | None:intergenic | 25.0% |
| !!! | TTTAATTTCCCATTTTGATG+CGG | - | chr3_1:4553145-4553164 | Msa0345350:intron | 25.0% |
| ! | ATTTAGTATTATTTCGTCGT+AGG | - | chr3_1:4553184-4553203 | Msa0345350:five_prime_UTR | 25.0% |
| ! | TTTAGTATTATTTCGTCGTA+GGG | - | chr3_1:4553185-4553204 | Msa0345350:five_prime_UTR | 25.0% |
| AAGCTATAAGCTCAAATTTG+TGG | + | chr3_1:4548105-4548124 | None:intergenic | 30.0% | |
| TTGACTAAAAAAGACCTGTT+CGG | - | chr3_1:4548142-4548161 | Msa0345350:CDS | 30.0% | |
| TATTGAAAACCTTAATGTGG+TGG | - | chr3_1:4548720-4548739 | Msa0345350:intron | 30.0% | |
| ACAAGAGAATCAAATTGAAC+AGG | + | chr3_1:4548902-4548921 | None:intergenic | 30.0% | |
| TTTGTTAAGAAGGGAGAAAA+TGG | - | chr3_1:4549084-4549103 | Msa0345350:intron | 30.0% | |
| TTGTTAAGAAGGGAGAAAAT+GGG | - | chr3_1:4549085-4549104 | Msa0345350:intron | 30.0% | |
| TAAGGTAGGTAAAGTTTGTA+GGG | - | chr3_1:4549217-4549236 | Msa0345350:intron | 30.0% | |
| TAGCAGAAAAATATAGACTC+GGG | + | chr3_1:4549379-4549398 | None:intergenic | 30.0% | |
| TATATGTCACATATGAAGAC+AGG | + | chr3_1:4549506-4549525 | None:intergenic | 30.0% | |
| TGTCTTCATATGTGACATAT+AGG | - | chr3_1:4549505-4549524 | Msa0345350:intron | 30.0% | |
| TCACTGAATTTAGTAATTCC+TGG | + | chr3_1:4549979-4549998 | None:intergenic | 30.0% | |
| GGAATTACTAAATTCAGTGA+AGG | - | chr3_1:4549979-4549998 | Msa0345350:intron | 30.0% | |
| CTAAACTTGAACAACTCTAT+AGG | - | chr3_1:4550126-4550145 | Msa0345350:intron | 30.0% | |
| GCAACAGTTAAATAAGTAAG+AGG | + | chr3_1:4550549-4550568 | None:intergenic | 30.0% | |
| ACCATCTCAAGTAAAGAAAA+AGG | - | chr3_1:4550871-4550890 | Msa0345350:intron | 30.0% | |
| ! | TCCTTTTTCTTTACTTGAGA+TGG | + | chr3_1:4550875-4550894 | None:intergenic | 30.0% |
| AGAAAAAGGAATCTCATTTG+GGG | - | chr3_1:4550885-4550904 | Msa0345350:intron | 30.0% | |
| ! | GGGAAATTTAACAACTGTTT+TGG | - | chr3_1:4550937-4550956 | Msa0345350:CDS | 30.0% |
| CTGCATAATAAAGTTTACTG+AGG | + | chr3_1:4551374-4551393 | None:intergenic | 30.0% | |
| !! | GATATGATGTTCTAAGAATG+AGG | - | chr3_1:4551551-4551570 | Msa0345350:intron | 30.0% |
| !! | TATGATGTTCTAAGAATGAG+GGG | - | chr3_1:4551553-4551572 | Msa0345350:intron | 30.0% |
| TGTTGAAAAATAAGAGGGTT+TGG | - | chr3_1:4551611-4551630 | Msa0345350:intron | 30.0% | |
| !!! | ACCTATCTGTTCTATTTTTG+TGG | - | chr3_1:4551707-4551726 | Msa0345350:intron | 30.0% |
| ACCACAAAAATAGAACAGAT+AGG | + | chr3_1:4551711-4551730 | None:intergenic | 30.0% | |
| CTTAATTCTGTTGAAGAACA+AGG | - | chr3_1:4551940-4551959 | Msa0345350:intron | 30.0% | |
| TCCCTAATTATCAAATTGCT+TGG | - | chr3_1:4552560-4552579 | Msa0345350:intron | 30.0% | |
| AGCATATAATTATCGCGTAA+TGG | + | chr3_1:4552648-4552667 | None:intergenic | 30.0% | |
| AAGTTCGAGAATAAAGGATT+GGG | - | chr3_1:4552671-4552690 | Msa0345350:intron | 30.0% | |
| TCCAAAACCTTAATCTTCAT+CGG | + | chr3_1:4552832-4552851 | None:intergenic | 30.0% | |
| CTCATTACGTTACTAAAGAA+TGG | - | chr3_1:4552925-4552944 | Msa0345350:intron | 30.0% | |
| ACGTTACTAAAGAATGGAAT+TGG | - | chr3_1:4552931-4552950 | Msa0345350:intron | 30.0% | |
| !! | AATTGGTTGGTTTATACCAA+AGG | + | chr3_1:4552982-4553001 | None:intergenic | 30.0% |
| TAAAAGTTCCGCATCAAAAT+GGG | + | chr3_1:4553156-4553175 | None:intergenic | 30.0% | |
| ATAAAAGTTCCGCATCAAAA+TGG | + | chr3_1:4553157-4553176 | None:intergenic | 30.0% | |
| GTGATAACTGTAGAGATGAA+CGG | + | chr3_1:4547745-4547764 | None:intergenic | 35.0% | |
| CAGTTATCACAAACTCTCAA+CGG | - | chr3_1:4547755-4547774 | Msa0345350:three_prime_UTR | 35.0% | |
| !! | CCAGATGATGGAAAAAGAAA+CGG | + | chr3_1:4547789-4547808 | None:intergenic | 35.0% |
| AATTAAGAAAGGGGGAAGAA+AGG | + | chr3_1:4547815-4547834 | None:intergenic | 35.0% | |
| GATGAGAACAGTACCAAAAT+TGG | + | chr3_1:4547850-4547869 | None:intergenic | 35.0% | |
| GGTTTAAATCGCTGTTGTAA+TGG | - | chr3_1:4548423-4548442 | Msa0345350:intron | 35.0% | |
| TTAAATCGCTGTTGTAATGG+CGG | - | chr3_1:4548426-4548445 | Msa0345350:intron | 35.0% | |
| AAGGAATTGTTAGCATCATG+AGG | + | chr3_1:4548552-4548571 | None:intergenic | 35.0% | |
| GATGCTAACAATTCCTTTGT+CGG | - | chr3_1:4548555-4548574 | Msa0345350:intron | 35.0% | |
| ATGCTAACAATTCCTTTGTC+GGG | - | chr3_1:4548556-4548575 | Msa0345350:intron | 35.0% | |
| ! | GATTTGCTTTGGCTTCAATT+GGG | - | chr3_1:4548593-4548612 | Msa0345350:intron | 35.0% |
| !! | CTCTGGATTAGTTAGTTCTT+AGG | - | chr3_1:4548643-4548662 | Msa0345350:intron | 35.0% |
| ! | AATGTTTACGGCAACAGTTT+TGG | + | chr3_1:4548746-4548765 | None:intergenic | 35.0% |
| ATTCAATCATGTGACTCCTT+GGG | - | chr3_1:4548870-4548889 | Msa0345350:intron | 35.0% | |
| TGCCCTAAGAACATTGTTTA+AGG | - | chr3_1:4548951-4548970 | Msa0345350:intron | 35.0% | |
| !! | GAAAATGGGATTTTAGCAGT+TGG | - | chr3_1:4549099-4549118 | Msa0345350:intron | 35.0% |
| !! | GGATTTTAGCAGTTGGAATT+TGG | - | chr3_1:4549106-4549125 | Msa0345350:intron | 35.0% |
| GTAAGGTAGGTAAAGTTTGT+AGG | - | chr3_1:4549216-4549235 | Msa0345350:intron | 35.0% | |
| AAGGTAGGTAAAGTTTGTAG+GGG | - | chr3_1:4549218-4549237 | Msa0345350:intron | 35.0% | |
| AGCAGAAAAATATAGACTCG+GGG | + | chr3_1:4549378-4549397 | None:intergenic | 35.0% | |
| TTTCACCAAAAATAAGCACG+TGG | - | chr3_1:4549819-4549838 | Msa0345350:intron | 35.0% | |
| AAGATCTATCCGAAGATGAA+GGG | - | chr3_1:4549860-4549879 | Msa0345350:intron | 35.0% | |
| TTCTTGTGATCTGACAATAC+TGG | + | chr3_1:4550154-4550173 | None:intergenic | 35.0% | |
| ! | TCTTGTTATAGAAAAGCTCG+CGG | - | chr3_1:4550174-4550193 | Msa0345350:CDS | 35.0% |
| GACAAAAAAGGAAAAGCTGA+TGG | - | chr3_1:4550228-4550247 | Msa0345350:intron | 35.0% | |
| TTGTTACAGCTAGCAGAAAA+GGG | - | chr3_1:4550382-4550401 | Msa0345350:intron | 35.0% | |
| TGTCACACCTGCTAATTATT+TGG | - | chr3_1:4550408-4550427 | Msa0345350:intron | 35.0% | |
| CTTATAAGTGTAGCGACAAA+AGG | - | chr3_1:4550448-4550467 | Msa0345350:intron | 35.0% | |
| TTTAACTGTTGCTGTGAACA+TGG | - | chr3_1:4550557-4550576 | Msa0345350:intron | 35.0% | |
| CTACTTCTGATTTCTTTCAG+TGG | - | chr3_1:4550581-4550600 | Msa0345350:intron | 35.0% | |
| ACAAAGAGAGGAGGAAAATT+TGG | + | chr3_1:4550661-4550680 | None:intergenic | 35.0% | |
| !! | GTTTTATACACACTTGTTGC+AGG | - | chr3_1:4550713-4550732 | Msa0345350:intron | 35.0% |
| CTGTCAGTGTTATCAAATAG+TGG | - | chr3_1:4550982-4551001 | Msa0345350:CDS | 35.0% | |
| TATAGATGCTACAACCACTA+TGG | + | chr3_1:4551082-4551101 | None:intergenic | 35.0% | |
| ATAGTGGTTGTAGCATCTAT+AGG | - | chr3_1:4551081-4551100 | Msa0345350:CDS | 35.0% | |
| TAGTGGTTGTAGCATCTATA+GGG | - | chr3_1:4551082-4551101 | Msa0345350:CDS | 35.0% | |
| AAAAAAAATGTGGCAGAGCA+TGG | + | chr3_1:4551252-4551271 | None:intergenic | 35.0% | |
| !! | TAGAGGATAGTGGAAAATAG+TGG | + | chr3_1:4551476-4551495 | None:intergenic | 35.0% |
| GTGTTATCAATAGAGGATAG+TGG | + | chr3_1:4551486-4551505 | None:intergenic | 35.0% | |
| TCACAAACAAATCTTCAGCA+TGG | + | chr3_1:4551533-4551552 | None:intergenic | 35.0% | |
| ! | TCGTTCAGTCAGTTTTTCAT+TGG | - | chr3_1:4551875-4551894 | Msa0345350:intron | 35.0% |
| GTTCTTCAACAGAATTAAGC+AGG | + | chr3_1:4551939-4551958 | None:intergenic | 35.0% | |
| AGCATTTACTTACAGACACT+TGG | - | chr3_1:4552028-4552047 | Msa0345350:intron | 35.0% | |
| GCATTTACTTACAGACACTT+GGG | - | chr3_1:4552029-4552048 | Msa0345350:intron | 35.0% | |
| TGTTCAAAGTTCATCCAGTT+TGG | + | chr3_1:4552327-4552346 | None:intergenic | 35.0% | |
| ! | TTTGATAATTAGGGACACGA+TGG | + | chr3_1:4552555-4552574 | None:intergenic | 35.0% |
| CAAGTTCGAGAATAAAGGAT+TGG | - | chr3_1:4552670-4552689 | Msa0345350:intron | 35.0% | |
| ! | TCCGATGAAGATTAAGGTTT+TGG | - | chr3_1:4552828-4552847 | Msa0345350:intron | 35.0% |
| AGTAACGTAATGAGCAGAAA+TGG | + | chr3_1:4552919-4552938 | None:intergenic | 35.0% | |
| ATGGAATTGGAGAAACTTGA+TGG | - | chr3_1:4552944-4552963 | Msa0345350:intron | 35.0% | |
| !! | CCAAGCTTTCGATTACTTTT+CGG | + | chr3_1:4553119-4553138 | None:intergenic | 35.0% |
| ATTATTTCGTCGTAGGGTAT+TGG | - | chr3_1:4553191-4553210 | Msa0345350:five_prime_UTR | 35.0% | |
| ATAACTGTAGAGATGAACGG+CGG | + | chr3_1:4547742-4547761 | None:intergenic | 40.0% | |
| ! | CCGTTTCTTTTTCCATCATC+TGG | - | chr3_1:4547786-4547805 | Msa0345350:three_prime_UTR | 40.0% |
| GAAGAAAGGTTACCAGATGA+TGG | + | chr3_1:4547801-4547820 | None:intergenic | 40.0% | |
| ! | ATAAGCTCGTGAGAAAGTGT+CGG | + | chr3_1:4548171-4548190 | None:intergenic | 40.0% |
| CACGAGCTTATAGCTTATAG+AGG | - | chr3_1:4548180-4548199 | Msa0345350:intron | 40.0% | |
| CTGTGTGTTTGTCATCATTG+AGG | - | chr3_1:4548402-4548421 | Msa0345350:intron | 40.0% | |
| ! | TGTGTTCCTCTCAAGGTATT+AGG | - | chr3_1:4548519-4548538 | Msa0345350:intron | 40.0% |
| TTCGAACCTAATACCTTGAG+AGG | + | chr3_1:4548528-4548547 | None:intergenic | 40.0% | |
| AAGCAAATCCCTATATGGAC+TGG | + | chr3_1:4548582-4548601 | None:intergenic | 40.0% | |
| ! | GTCCATATAGGGATTTGCTT+TGG | - | chr3_1:4548582-4548601 | Msa0345350:intron | 40.0% |
| AGCCAAAGCAAATCCCTATA+TGG | + | chr3_1:4548587-4548606 | None:intergenic | 40.0% | |
| ! | GGATTTGCTTTGGCTTCAAT+TGG | - | chr3_1:4548592-4548611 | Msa0345350:intron | 40.0% |
| !! | GGATTAGTTAGTTCTTAGGC+CGG | - | chr3_1:4548647-4548666 | Msa0345350:intron | 40.0% |
| ! | GTCAAAGCATCCCTAAAAGA+TGG | + | chr3_1:4548793-4548812 | None:intergenic | 40.0% |
| GATTCAATCATGTGACTCCT+TGG | - | chr3_1:4548869-4548888 | Msa0345350:intron | 40.0% | |
| GGGAGGTTTAGAGAAAAACA+AGG | - | chr3_1:4549238-4549257 | Msa0345350:intron | 40.0% | |
| ! | TACTTGACTTTTTACGGCCT+TGG | + | chr3_1:4549615-4549634 | None:intergenic | 40.0% |
| TTAACTTTCTTCTGTCCGTG+TGG | + | chr3_1:4549661-4549680 | None:intergenic | 40.0% | |
| !! | TTCCTCCACGTGCTTATTTT+TGG | + | chr3_1:4549827-4549846 | None:intergenic | 40.0% |
| GAAGATCTATCCGAAGATGA+AGG | - | chr3_1:4549859-4549878 | Msa0345350:intron | 40.0% | |
| AGATCTATCCGAAGATGAAG+GGG | - | chr3_1:4549861-4549880 | Msa0345350:intron | 40.0% | |
| ! | GTGAAGGTTGTAAAGCATTC+AGG | - | chr3_1:4549995-4550014 | Msa0345350:intron | 40.0% |
| ! | AGGTTGTAAAGCATTCAGGA+TGG | - | chr3_1:4549999-4550018 | Msa0345350:intron | 40.0% |
| ! | GAGTGTTTCTGATGAGTTGT+TGG | - | chr3_1:4550044-4550063 | Msa0345350:intron | 40.0% |
| ! | TGATGAGTTGTTGGTAAGCT+AGG | - | chr3_1:4550053-4550072 | Msa0345350:intron | 40.0% |
| GATCAAGGGAGAGACAAAAA+AGG | - | chr3_1:4550216-4550235 | Msa0345350:intron | 40.0% | |
| CTTGTTACAGCTAGCAGAAA+AGG | - | chr3_1:4550381-4550400 | Msa0345350:intron | 40.0% | |
| ATAAGTGTAGCGACAAAAGG+AGG | - | chr3_1:4550451-4550470 | Msa0345350:intron | 40.0% | |
| TCATACAAAGCGACAAAGAG+AGG | + | chr3_1:4550673-4550692 | None:intergenic | 40.0% | |
| ! | AAAGCTCAAGTTGCTCAGAA+AGG | - | chr3_1:4550741-4550760 | Msa0345350:CDS | 40.0% |
| ! | AAGCTCAAGTTGCTCAGAAA+GGG | - | chr3_1:4550742-4550761 | Msa0345350:CDS | 40.0% |
| TTTGCATCCCTGTTCTTTGA+GGG | + | chr3_1:4550774-4550793 | None:intergenic | 40.0% | |
| TCAAAGAACAGGGATGCAAA+GGG | - | chr3_1:4550774-4550793 | Msa0345350:CDS | 40.0% | |
| !! | TTTTAAAGAGGCAGCATGTG+AGG | - | chr3_1:4551329-4551348 | Msa0345350:CDS | 40.0% |
| GTGGAATAGCATACCATTGT+AGG | + | chr3_1:4551457-4551476 | None:intergenic | 40.0% | |
| ! | AAATAAGAGGGTTTGGAACC+TGG | - | chr3_1:4551618-4551637 | Msa0345350:intron | 40.0% |
| ! | AATAAGAGGGTTTGGAACCT+GGG | - | chr3_1:4551619-4551638 | Msa0345350:intron | 40.0% |
| ! | AAGCCTTCTTTTCAGCGTTA+GGG | - | chr3_1:4551811-4551830 | Msa0345350:intron | 40.0% |
| AACAGAATTAAGCAGGACTC+GGG | + | chr3_1:4551932-4551951 | None:intergenic | 40.0% | |
| CAACAGAATTAAGCAGGACT+CGG | + | chr3_1:4551933-4551952 | None:intergenic | 40.0% | |
| GCTTAGACAAATTGCCAAAC+TGG | - | chr3_1:4552310-4552329 | Msa0345350:intron | 40.0% | |
| TTGCTTGGATTTGGATATGC+AGG | - | chr3_1:4552575-4552594 | Msa0345350:intron | 40.0% | |
| AGAGGATGAACAACCTTCTT+GGG | - | chr3_1:4552620-4552639 | Msa0345350:intron | 40.0% | |
| GCTGACAAGTTCGAGAATAA+AGG | - | chr3_1:4552665-4552684 | Msa0345350:intron | 40.0% | |
| TGAGCAACATGATGAGTACA+AGG | + | chr3_1:4552753-4552772 | None:intergenic | 40.0% | |
| TTCATCGGAACTGCTATCTT+GGG | + | chr3_1:4552817-4552836 | None:intergenic | 40.0% | |
| AGCAGTTCCGATGAAGATTA+AGG | - | chr3_1:4552822-4552841 | Msa0345350:intron | 40.0% | |
| !! | CGTGTTTCTAGTGGGATAAT+TGG | - | chr3_1:4552872-4552891 | Msa0345350:intron | 40.0% |
| CCGAAAAGTAATCGAAAGCT+TGG | - | chr3_1:4553116-4553135 | Msa0345350:intron | 40.0% | |
| TCCTTGATATTGTAACCCCC+AGG | - | chr3_1:4548460-4548479 | Msa0345350:intron | 45.0% | |
| CCTTGATATTGTAACCCCCA+GGG | - | chr3_1:4548461-4548480 | Msa0345350:intron | 45.0% | |
| CTTGATATTGTAACCCCCAG+GGG | - | chr3_1:4548462-4548481 | Msa0345350:intron | 45.0% | |
| GTAGTGTAGGCTTGAGACAT+GGG | - | chr3_1:4548494-4548513 | Msa0345350:intron | 45.0% | |
| !! | CAGTTTTGGCCACCACATTA+AGG | + | chr3_1:4548732-4548751 | None:intergenic | 45.0% |
| !! | ACCGTTCTACTAGTTTGCTG+TGG | - | chr3_1:4549021-4549040 | Msa0345350:intron | 45.0% |
| GCCACAGCAAACTAGTAGAA+CGG | + | chr3_1:4549025-4549044 | None:intergenic | 45.0% | |
| GTAGGTAAAGTTTGTAGGGG+AGG | - | chr3_1:4549221-4549240 | Msa0345350:intron | 45.0% | |
| CATGGCTGAAGAAACACAAG+TGG | - | chr3_1:4549546-4549565 | Msa0345350:intron | 45.0% | |
| GAAACACAAGTGGTTGAGCA+TGG | - | chr3_1:4549556-4549575 | Msa0345350:intron | 45.0% | |
| CTACCAAACTTCCTCTTTCC+CGG | + | chr3_1:4549589-4549608 | None:intergenic | 45.0% | |
| AGGAAGTTTGGTAGGAACCA+AGG | - | chr3_1:4549595-4549614 | Msa0345350:intron | 45.0% | |
| ! | TGTGGTGGCTTCATCACTTT+TGG | + | chr3_1:4549643-4549662 | None:intergenic | 45.0% |
| AAAGTGATGAAGCCACCACA+CGG | - | chr3_1:4549643-4549662 | Msa0345350:intron | 45.0% | |
| TTCTAGTACTCCCAGTAGCA+GGG | + | chr3_1:4549765-4549784 | None:intergenic | 45.0% | |
| !! | TACTGGGAGTACTAGAAGTG+TGG | - | chr3_1:4549768-4549787 | Msa0345350:intron | 45.0% |
| GTGGCATCTATGAAGACTAG+AGG | - | chr3_1:4549787-4549806 | Msa0345350:intron | 45.0% | |
| CACCAAAAATAAGCACGTGG+AGG | - | chr3_1:4549822-4549841 | Msa0345350:intron | 45.0% | |
| TTCTGCTACCCCTTCATCTT+CGG | + | chr3_1:4549872-4549891 | None:intergenic | 45.0% | |
| ! | CTCTGAGGATGAAGATGATG+AGG | - | chr3_1:4549939-4549958 | Msa0345350:intron | 45.0% |
| TGAGGATGAAGATGATGAGG+AGG | - | chr3_1:4549942-4549961 | Msa0345350:intron | 45.0% | |
| TATAGAAAAGCTCGCGGAAG+AGG | - | chr3_1:4550180-4550199 | Msa0345350:CDS | 45.0% | |
| TATCTATCGGGTAAGCAGTC+TGG | - | chr3_1:4550341-4550360 | Msa0345350:intron | 45.0% | |
| TGCGCGTCCAAATAATTAGC+AGG | + | chr3_1:4550418-4550437 | None:intergenic | 45.0% | |
| TACAAAGCGACAAAGAGAGG+AGG | + | chr3_1:4550670-4550689 | None:intergenic | 45.0% | |
| TTGCATCCCTGTTCTTTGAG+GGG | + | chr3_1:4550773-4550792 | None:intergenic | 45.0% | |
| CTTTGCATCCCTGTTCTTTG+AGG | + | chr3_1:4550775-4550794 | None:intergenic | 45.0% | |
| CTCAAAGAACAGGGATGCAA+AGG | - | chr3_1:4550773-4550792 | Msa0345350:CDS | 45.0% | |
| TGAGCTGCATACAACCTCTT+TGG | - | chr3_1:4551048-4551067 | Msa0345350:CDS | 45.0% | |
| GAGCTGCATACAACCTCTTT+GGG | - | chr3_1:4551049-4551068 | Msa0345350:CDS | 45.0% | |
| ATACAACCTCTTTGGGCCTT+TGG | - | chr3_1:4551056-4551075 | Msa0345350:CDS | 45.0% | |
| ATCCTCCTCACTGGAAATAG+AGG | + | chr3_1:4551291-4551310 | None:intergenic | 45.0% | |
| AAATAGCAGACGCAGCATAG+TGG | + | chr3_1:4551433-4551452 | None:intergenic | 45.0% | |
| ! | CGTCTGCTATTTGCCTACAA+TGG | - | chr3_1:4551441-4551460 | Msa0345350:intron | 45.0% |
| ! | TGGTTCTATTTGGAGGAGCA+TGG | + | chr3_1:4551646-4551665 | None:intergenic | 45.0% |
| ! | ACAGGGATGGTTCTATTTGG+AGG | + | chr3_1:4551653-4551672 | None:intergenic | 45.0% |
| ! | CTGACAGGGATGGTTCTATT+TGG | + | chr3_1:4551656-4551675 | None:intergenic | 45.0% |
| TGAAACCGAGAACTCTGACA+GGG | + | chr3_1:4551670-4551689 | None:intergenic | 45.0% | |
| CGCTGAAAAGAAGGCTTCTT+TGG | + | chr3_1:4551808-4551827 | None:intergenic | 45.0% | |
| ! | GAAGCCTTCTTTTCAGCGTT+AGG | - | chr3_1:4551810-4551829 | Msa0345350:intron | 45.0% |
| CTTCCCTAACGCTGAAAAGA+AGG | + | chr3_1:4551817-4551836 | None:intergenic | 45.0% | |
| ATCACCTTTGCACCAATAGC+TGG | + | chr3_1:4551840-4551859 | None:intergenic | 45.0% | |
| GCCAATGCAAGCACAAACAA+GGG | - | chr3_1:4552597-4552616 | Msa0345350:intron | 45.0% | |
| ! | TCCCTTGTTTGTGCTTGCAT+TGG | + | chr3_1:4552601-4552620 | None:intergenic | 45.0% |
| GAGAGGATGAACAACCTTCT+TGG | - | chr3_1:4552619-4552638 | Msa0345350:intron | 45.0% | |
| CATGATGAGTACAAGGTAGC+TGG | + | chr3_1:4552746-4552765 | None:intergenic | 45.0% | |
| TCATCATGTTGCTCAACTGC+AGG | - | chr3_1:4552758-4552777 | Msa0345350:intron | 45.0% | |
| CATCATGTTGCTCAACTGCA+GGG | - | chr3_1:4552759-4552778 | Msa0345350:intron | 45.0% | |
| CTTCATCGGAACTGCTATCT+TGG | + | chr3_1:4552818-4552837 | None:intergenic | 45.0% | |
| !! | AGCATCAGCGTGTTTCTAGT+GGG | - | chr3_1:4552864-4552883 | Msa0345350:intron | 45.0% |
| ! | GGAGAAACTTGATGGCTGAT+TGG | - | chr3_1:4552952-4552971 | Msa0345350:intron | 45.0% |
| ! | AAACTTGATGGCTGATTGGC+TGG | - | chr3_1:4552956-4552975 | Msa0345350:intron | 45.0% |
| !!! | TTTATTTATTTTGATTTTAT+TGG | - | chr3_1:4547973-4547992 | Msa0345350:three_prime_UTR | 5.0% |
| !!! | TTTTTTTTTTTTATAAAACT+TGG | + | chr3_1:4548676-4548695 | None:intergenic | 5.0% |
| !!! | ATATTATTTTCTTTTTTATT+AGG | - | chr3_1:4552256-4552275 | Msa0345350:intron | 5.0% |
| !! | GAAAGTGTCGGTTACCGAAC+AGG | + | chr3_1:4548159-4548178 | None:intergenic | 50.0% |
| CCCTGGGGGTTACAATATCA+AGG | + | chr3_1:4548464-4548483 | None:intergenic | 50.0% | |
| TATTGTAACCCCCAGGGGTT+TGG | - | chr3_1:4548467-4548486 | Msa0345350:intron | 50.0% | |
| GGTAGTGTAGGCTTGAGACA+TGG | - | chr3_1:4548493-4548512 | Msa0345350:intron | 50.0% | |
| ! | ATGGGAGTGTGTTCCTCTCA+AGG | - | chr3_1:4548512-4548531 | Msa0345350:intron | 50.0% |
| !! | TATATGGACTGGCCCGACAA+AGG | + | chr3_1:4548571-4548590 | None:intergenic | 50.0% |
| TTTGTCGGGCCAGTCCATAT+AGG | - | chr3_1:4548570-4548589 | Msa0345350:intron | 50.0% | |
| TTGTCGGGCCAGTCCATATA+GGG | - | chr3_1:4548571-4548590 | Msa0345350:intron | 50.0% | |
| TCATGTGACTCCTTGGGTCA+TGG | - | chr3_1:4548876-4548895 | Msa0345350:intron | 50.0% | |
| ATTGAACAGGCCATGACCCA+AGG | + | chr3_1:4548889-4548908 | None:intergenic | 50.0% | |
| CGGGAAAGAGGAAGTTTGGT+AGG | - | chr3_1:4549587-4549606 | Msa0345350:intron | 50.0% | |
| ACTTTCTTCTGTCCGTGTGG+TGG | + | chr3_1:4549658-4549677 | None:intergenic | 50.0% | |
| TCTAGTACTCCCAGTAGCAG+GGG | + | chr3_1:4549764-4549783 | None:intergenic | 50.0% | |
| CTTCTAGTACTCCCAGTAGC+AGG | + | chr3_1:4549766-4549785 | None:intergenic | 50.0% | |
| GAAGATGAAGGGGTAGCAGA+AGG | - | chr3_1:4549871-4549890 | Msa0345350:intron | 50.0% | |
| GAGACAGAGCGCAAGATCAA+GGG | - | chr3_1:4550202-4550221 | Msa0345350:CDS | 50.0% | |
| ! | TCAAGTTGCTCAGAAAGGGC+TGG | - | chr3_1:4550746-4550765 | Msa0345350:CDS | 50.0% |
| GCTACAACCACTATGGCCAA+AGG | + | chr3_1:4551075-4551094 | None:intergenic | 50.0% | |
| CTCACTGGAAATAGAGGAGG+AGG | + | chr3_1:4551285-4551304 | None:intergenic | 50.0% | |
| CTCCTCCTCTATTTCCAGTG+AGG | - | chr3_1:4551283-4551302 | Msa0345350:CDS | 50.0% | |
| CTCCTCACTGGAAATAGAGG+AGG | + | chr3_1:4551288-4551307 | None:intergenic | 50.0% | |
| CTCCTCTATTTCCAGTGAGG+AGG | - | chr3_1:4551286-4551305 | Msa0345350:CDS | 50.0% | |
| TGAAGGATCATCCTCCTCAC+TGG | + | chr3_1:4551300-4551319 | None:intergenic | 50.0% | |
| ACCATCCCTGTCAGAGTTCT+CGG | - | chr3_1:4551662-4551681 | Msa0345350:intron | 50.0% | |
| GTGAAACCGAGAACTCTGAC+AGG | + | chr3_1:4551671-4551690 | None:intergenic | 50.0% | |
| GAAGCCAGCTATTGGTGCAA+AGG | - | chr3_1:4551833-4551852 | Msa0345350:intron | 50.0% | |
| GGCCAATGCAAGCACAAACA+AGG | - | chr3_1:4552596-4552615 | Msa0345350:intron | 50.0% | |
| TGCAAGCACAAACAAGGGAG+AGG | - | chr3_1:4552602-4552621 | Msa0345350:intron | 50.0% | |
| !! | CAGCATCAGCGTGTTTCTAG+TGG | - | chr3_1:4552863-4552882 | Msa0345350:intron | 50.0% |
| ATGAACGGCGGAAGTGACAG+CGG | + | chr3_1:4547730-4547749 | None:intergenic | 55.0% | |
| CTTCAATTGGGCCCTGCTAG+TGG | - | chr3_1:4548605-4548624 | Msa0345350:intron | 55.0% | |
| AATTGGGCCCTGCTAGTGGA+CGG | - | chr3_1:4548609-4548628 | Msa0345350:intron | 55.0% | |
| AATCCCACCGTCCACTAGCA+GGG | + | chr3_1:4548619-4548638 | None:intergenic | 55.0% | |
| GGTTGAGCATGGAAGTGAGC+CGG | - | chr3_1:4549567-4549586 | Msa0345350:intron | 55.0% | |
| GTTGAGCATGGAAGTGAGCC+GGG | - | chr3_1:4549568-4549587 | Msa0345350:intron | 55.0% | |
| ATGGAAGTGAGCCGGGAAAG+AGG | - | chr3_1:4549575-4549594 | Msa0345350:intron | 55.0% | |
| GAGCCGGGAAAGAGGAAGTT+TGG | - | chr3_1:4549583-4549602 | Msa0345350:intron | 55.0% | |
| AGACAACTGCCCCTGCTACT+GGG | - | chr3_1:4549752-4549771 | Msa0345350:intron | 55.0% | |
| GAGGAGGATGAGATTCAGCC+AGG | - | chr3_1:4549958-4549977 | Msa0345350:intron | 55.0% | |
| GGAGACAGAGCGCAAGATCA+AGG | - | chr3_1:4550201-4550220 | Msa0345350:CDS | 55.0% | |
| GCTGGACCCCTCAAAGAACA+GGG | - | chr3_1:4550764-4550783 | Msa0345350:CDS | 55.0% | |
| CTATGGCCAAAGGCCCAAAG+AGG | + | chr3_1:4551065-4551084 | None:intergenic | 55.0% | |
| CTTTGGGCCTTTGGCCATAG+TGG | - | chr3_1:4551065-4551084 | Msa0345350:CDS | 55.0% | |
| ! | ATTTGGAGGAGCATGGTCCC+AGG | + | chr3_1:4551639-4551658 | None:intergenic | 55.0% |
| ACCGAGAACTCTGACAGGGA+TGG | + | chr3_1:4551666-4551685 | None:intergenic | 55.0% | |
| GCGTTAGGGAAGCCAGCTAT+TGG | - | chr3_1:4551825-4551844 | Msa0345350:intron | 55.0% | |
| ! | TCGCGTAATGGAGCCCAAGA+AGG | + | chr3_1:4552636-4552655 | None:intergenic | 55.0% |
| !! | ATGGCTGATTGGCTGGCCTT+TGG | - | chr3_1:4552963-4552982 | Msa0345350:intron | 55.0% |
| GAAGTGACAGCGGCTGGGAA+AGG | + | chr3_1:4547720-4547739 | None:intergenic | 60.0% | |
| ACTACCACGCCAAACCCCTG+GGG | + | chr3_1:4548479-4548498 | None:intergenic | 60.0% | |
| CACTACCACGCCAAACCCCT+GGG | + | chr3_1:4548480-4548499 | None:intergenic | 60.0% | |
| ACACTACCACGCCAAACCCC+TGG | + | chr3_1:4548481-4548500 | None:intergenic | 60.0% | |
| ! | GGGGTTTGGCGTGGTAGTGT+AGG | - | chr3_1:4548481-4548500 | Msa0345350:intron | 60.0% |
| CAATCCCACCGTCCACTAGC+AGG | + | chr3_1:4548620-4548639 | None:intergenic | 60.0% | |
| ! | CTGCTAGTGGACGGTGGGAT+TGG | - | chr3_1:4548618-4548637 | Msa0345350:intron | 60.0% |
| !! | GGACGGTGGGATTGGTTCTC+TGG | - | chr3_1:4548626-4548645 | Msa0345350:intron | 60.0% |
| GAGACAACTGCCCCTGCTAC+TGG | - | chr3_1:4549751-4549770 | Msa0345350:intron | 60.0% | |
| GGCTGGACCCCTCAAAGAAC+AGG | - | chr3_1:4550763-4550782 | Msa0345350:CDS | 60.0% | |
| TAACCCCCAGGGGTTTGGCG+TGG | - | chr3_1:4548472-4548491 | Msa0345350:intron | 65.0% | |
| CTACCACGCCAAACCCCTGG+GGG | + | chr3_1:4548478-4548497 | None:intergenic | 65.0% | |
| CGGCGGAAGTGACAGCGGCT+GGG | + | chr3_1:4547725-4547744 | None:intergenic | 70.0% | |
| ACGGCGGAAGTGACAGCGGC+TGG | + | chr3_1:4547726-4547745 | None:intergenic | 70.0% | |
| ! | TGGGCCCTGCTAGTGGACGG+TGG | - | chr3_1:4548612-4548631 | Msa0345350:intron | 70.0% |
| ! | GGGCCCTGCTAGTGGACGGT+GGG | - | chr3_1:4548613-4548632 | Msa0345350:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 4547701 | 4553263 | 4547701 | ID=Msa0345350;Name=Msa0345350 |
| chr3_1 | mRNA | 4547701 | 4553263 | 4547701 | ID=Msa0345350-mRNA-1;Parent=Msa0345350;Name=Msa0345350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=127|1|1|1|0.87|0.77|9|421|340 |
| chr3_1 | exon | 4547701 | 4548184 | 4547701 | ID=Msa0345350-mRNA-1:exon:1455;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4548257 | 4548367 | 4548257 | ID=Msa0345350-mRNA-1:exon:1454;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4549110 | 4549174 | 4549110 | ID=Msa0345350-mRNA-1:exon:1453;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4550169 | 4550229 | 4550169 | ID=Msa0345350-mRNA-1:exon:1452;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4550344 | 4550363 | 4550344 | ID=Msa0345350-mRNA-1:exon:1451;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4550492 | 4550573 | 4550492 | ID=Msa0345350-mRNA-1:exon:1450;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4550715 | 4550816 | 4550715 | ID=Msa0345350-mRNA-1:exon:1449;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4550899 | 4551437 | 4550899 | ID=Msa0345350-mRNA-1:exon:1448;Parent=Msa0345350-mRNA-1 |
| chr3_1 | exon | 4553157 | 4553263 | 4553157 | ID=Msa0345350-mRNA-1:exon:1447;Parent=Msa0345350-mRNA-1 |
| chr3_1 | five_prime_UTR | 4553157 | 4553263 | 4553157 | ID=Msa0345350-mRNA-1:five_prime_utr;Parent=Msa0345350-mRNA-1 |
| chr3_1 | five_prime_UTR | 4551418 | 4551437 | 4551418 | ID=Msa0345350-mRNA-1:five_prime_utr;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4550899 | 4551417 | 4550899 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4550715 | 4550816 | 4550715 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4550492 | 4550573 | 4550492 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4550344 | 4550363 | 4550344 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4550169 | 4550229 | 4550169 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4549110 | 4549174 | 4549110 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4548257 | 4548367 | 4548257 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | CDS | 4548122 | 4548184 | 4548122 | ID=Msa0345350-mRNA-1:cds;Parent=Msa0345350-mRNA-1 |
| chr3_1 | three_prime_UTR | 4547701 | 4548121 | 4547701 | ID=Msa0345350-mRNA-1:three_prime_utr;Parent=Msa0345350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
