Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257650 | XP_003608732.1 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 1.09e-85 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257650 | sp|Q9FGK0|NDUB8_ARATH | 82.400 | 125 | 22 | 0 | 1 | 125 | 1 | 125 | 4.15e-63 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257650 | G7JIY6 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 5.19e-86 | 255 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0120530 | Msa1257650 | 0.803097 | 4.102302e-49 | -8.615850e-47 |
| Msa1257650 | Msa1257800 | 0.856602 | 2.879330e-62 | -8.615850e-47 |
| Msa1257650 | Msa1446180 | 0.813778 | 2.154596e-51 | -8.615850e-47 |
| Msa1257650 | Msa1458100 | 0.808796 | 2.597674e-50 | -8.615850e-47 |
| Msa0469940 | Msa1257650 | 0.805177 | 1.513888e-49 | -8.615850e-47 |
| Msa0344690 | Msa1257650 | 0.826962 | 2.034009e-54 | -8.615850e-47 |
| Msa1144720 | Msa1257650 | 0.808442 | 3.091543e-50 | -8.615850e-47 |
| Msa0546870 | Msa1257650 | 0.811898 | 5.561615e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257650 | MtrunA17_Chr4g0056331 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 1.00e-89 | 255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257650 | AT5G47570.1 | 82.400 | 125 | 22 | 0 | 1 | 125 | 1 | 125 | 4.22e-64 | 191 |
Find 57 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAATTTATCTAATCTTTA+TGG | 0.045452 | 8_2:+58271886 | Msa1257650:three_prime_UTR |
| TTTCATCATTCTCATGCTTC+TGG | 0.236372 | 8_2:+58271835 | Msa1257650:three_prime_UTR |
| GAGAAACGAACGGGTTTGTT+AGG | 0.253010 | 8_2:-58267129 | None:intergenic |
| CAGGCCAAACGACTTCGTTT+TGG | 0.306817 | 8_2:-58266896 | None:intergenic |
| AGGTAGATCCAAGGCAATAA+TGG | 0.331587 | 8_2:+58271679 | Msa1257650:exon |
| GGCTCTTCGATTCCTGTACT+TGG | 0.344379 | 8_2:-58271792 | None:intergenic |
| TTCAAATCCCATTATTGCCT+TGG | 0.378386 | 8_2:-58271687 | None:intergenic |
| TTGTCATATGGATAAACTTT+GGG | 0.382238 | 8_2:-58271627 | None:intergenic |
| AGATAAATTGAGCAGAATAA+TGG | 0.400505 | 8_2:-58271875 | None:intergenic |
| ATTTCCAAAACGAAGTCGTT+TGG | 0.401582 | 8_2:+58266892 | Msa1257650:five_prime_UTR |
| CTCCGCCTTCGCTCCGGCAT+GGG | 0.408001 | 8_2:+58267081 | Msa1257650:CDS |
| TCTATACAAGGTTCAGGAAA+TGG | 0.408392 | 8_2:-58267279 | None:intergenic |
| ATGCGATCTATACAAGGTTC+AGG | 0.410095 | 8_2:-58267285 | None:intergenic |
| TATTGCCTTGGATCTACCTA+TGG | 0.415342 | 8_2:-58271675 | None:intergenic |
| GAAGCATTGGCGTGGCTTTG+TGG | 0.425668 | 8_2:+58267429 | Msa1257650:CDS |
| AGAAACGAACGGGTTTGTTA+GGG | 0.426104 | 8_2:-58267128 | None:intergenic |
| GGTAGATCCAAGGCAATAAT+GGG | 0.446872 | 8_2:+58271680 | Msa1257650:exon |
| ACACAAAAGTACAAATGAAC+GGG | 0.464595 | 8_2:-58271733 | None:intergenic |
| TTAACTTACAAATGGTGTCT+TGG | 0.464926 | 8_2:-58267508 | None:intergenic |
| ATTGTCATATGGATAAACTT+TGG | 0.466688 | 8_2:-58271628 | None:intergenic |
| AGGAATCGAAGAGCCGAATC+TGG | 0.473800 | 8_2:+58271800 | Msa1257650:three_prime_UTR |
| ATTTCTCTACGCAGAATGCT+TGG | 0.473875 | 8_2:+58272105 | Msa1257650:three_prime_UTR |
| CATGTTAGTTCTTCATTCAC+CGG | 0.487264 | 8_2:-58267243 | None:intergenic |
| GATCGCATTGCTGATACTGT+TGG | 0.491226 | 8_2:+58267300 | Msa1257650:CDS |
| TCACAAATCTTAGGCGGAAA+CGG | 0.493055 | 8_2:+58267030 | Msa1257650:CDS |
| CATCATTCTCATGCTTCTGG+TGG | 0.499841 | 8_2:+58271838 | Msa1257650:three_prime_UTR |
| TTTCTAGCAATCATATTTGG+TGG | 0.500363 | 8_2:-58271975 | None:intergenic |
| ATCGAAGCAATAACCATGGC+AGG | 0.504944 | 8_2:+58266988 | Msa1257650:exon |
| GGAGACCCATGCCGGAGCGA+AGG | 0.516461 | 8_2:-58267086 | None:intergenic |
| TCCGACAGGGAGACCCATGC+CGG | 0.522170 | 8_2:-58267094 | None:intergenic |
| TTGAAATTAGTATGAAGCAT+TGG | 0.528117 | 8_2:+58267416 | Msa1257650:intron |
| CGGTGAATGAAGAACTAACA+TGG | 0.534935 | 8_2:+58267244 | Msa1257650:CDS |
| TCCACTCGCAGATTGTCATA+TGG | 0.536750 | 8_2:-58271639 | None:intergenic |
| GGAGCTTGGTGGTGAACCAT+AGG | 0.538851 | 8_2:+58271659 | Msa1257650:CDS |
| TTCTGGTGGCTATAGTCAGT+TGG | 0.542956 | 8_2:+58271852 | Msa1257650:three_prime_UTR |
| GACAATCTGCGAGTGGAGCT+TGG | 0.545668 | 8_2:+58271645 | Msa1257650:CDS |
| TCCGGCATGGGTCTCCCTGT+CGG | 0.546369 | 8_2:+58267093 | Msa1257650:CDS |
| TCATCCCTCCGCCTTCGCTC+CGG | 0.546790 | 8_2:+58267075 | Msa1257650:CDS |
| ATCTAATCTTTATGGAACTG+AGG | 0.551442 | 8_2:+58271894 | Msa1257650:three_prime_UTR |
| AACACAAAAGTACAAATGAA+CGG | 0.561322 | 8_2:-58271734 | None:intergenic |
| GTTTGTTAATCTACCTGCCA+TGG | 0.570431 | 8_2:-58267001 | None:intergenic |
| CATTGCTGATACTGTTGGAA+AGG | 0.586857 | 8_2:+58267305 | Msa1257650:CDS |
| AACGTAGCATCACAAATCTT+AGG | 0.588126 | 8_2:+58267021 | Msa1257650:CDS |
| TCAGCAATGCGATCTATACA+AGG | 0.598418 | 8_2:-58267291 | None:intergenic |
| CATGCCGGAGCGAAGGCGGA+GGG | 0.600232 | 8_2:-58267079 | None:intergenic |
| GTTTGGGATTATTGGCTGTG+TGG | 0.604221 | 8_2:+58267472 | Msa1257650:CDS |
| GACTTGCTGAAACCAAGTAC+AGG | 0.612858 | 8_2:+58271780 | Msa1257650:three_prime_UTR |
| GAAGAACTAACATGGGACAA+TGG | 0.633770 | 8_2:+58267252 | Msa1257650:CDS |
| GCATTGGCGTGGCTTTGTGG+AGG | 0.638427 | 8_2:+58267432 | Msa1257650:CDS |
| GTGAACCATAGGTAGATCCA+AGG | 0.643233 | 8_2:+58271670 | Msa1257650:exon |
| TCCATATGACAATCTGCGAG+TGG | 0.653196 | 8_2:+58271638 | Msa1257650:CDS |
| ATTAGTATGAAGCATTGGCG+TGG | 0.663186 | 8_2:+58267421 | Msa1257650:intron |
| GGAGGGATGAAGCTACAGAT+CGG | 0.672227 | 8_2:-58267062 | None:intergenic |
| AATCTGCGAGTGGAGCTTGG+TGG | 0.674769 | 8_2:+58271648 | Msa1257650:CDS |
| AAGAATCGAAGCAATAACCA+TGG | 0.678306 | 8_2:+58266984 | Msa1257650:exon |
| GGTGAATGAAGAACTAACAT+GGG | 0.683523 | 8_2:+58267245 | Msa1257650:CDS |
| GTAGCATCACAAATCTTAGG+CGG | 0.694755 | 8_2:+58267024 | Msa1257650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATTCTATTTTACTT+AGG | - | chr8_2:58267739-58267758 | None:intergenic | 10.0% |
| !!! | ATTGTCTTTTTTTTTTTTTT+AGG | + | chr8_2:58269910-58269929 | Msa1257650:intron | 10.0% |
| !!! | AAGTTTTATAAATATTTTCT+AGG | + | chr8_2:58270557-58270576 | Msa1257650:intron | 10.0% |
| !!! | AGTTTTATAAATATTTTCTA+GGG | + | chr8_2:58270558-58270577 | Msa1257650:intron | 10.0% |
| !!! | ATTTTTTGATTAATTACTTA+TGG | - | chr8_2:58271173-58271192 | Msa1257660:intron | 10.0% |
| !! | ATTAATCAAAAAATTTAACA+TGG | + | chr8_2:58271179-58271198 | Msa1257650:intron | 10.0% |
| !! | AATTGAAATGAAAATTGAAT+AGG | - | chr8_2:58267164-58267183 | None:intergenic | 15.0% |
| !!! | TTCATTAATAAAACTTTTTG+AGG | - | chr8_2:58267672-58267691 | None:intergenic | 15.0% |
| !! | TTAAATTCAGTGTTATAAAA+TGG | - | chr8_2:58268051-58268070 | None:intergenic | 15.0% |
| !! | TATCAATAAAGTGTAAAATA+AGG | + | chr8_2:58268331-58268350 | Msa1257650:intron | 15.0% |
| !!! | TTTTTAATTTGTTCACTATT+TGG | + | chr8_2:58268754-58268773 | Msa1257650:intron | 15.0% |
| !! | AGAATAAATAAATATGCAAA+TGG | - | chr8_2:58269272-58269291 | None:intergenic | 15.0% |
| !! | ATTTATTTATTCTAAGTAGT+AGG | + | chr8_2:58269279-58269298 | Msa1257650:intron | 15.0% |
| !! | AAATTCTATTATTGATGTTT+AGG | + | chr8_2:58269851-58269870 | Msa1257650:intron | 15.0% |
| !!! | TTTTTAGGATAATTATGTTA+AGG | + | chr8_2:58269925-58269944 | Msa1257650:intron | 15.0% |
| !! | TTATTCTATGTTTATGTATT+TGG | + | chr8_2:58270613-58270632 | Msa1257650:intron | 15.0% |
| !! | TATTCTATGTTTATGTATTT+GGG | + | chr8_2:58270614-58270633 | Msa1257650:intron | 15.0% |
| !! | TAGATATAATAATCATACAT+GGG | - | chr8_2:58271117-58271136 | Msa1257660:intron | 15.0% |
| !! | TTAGATATAATAATCATACA+TGG | - | chr8_2:58271118-58271137 | Msa1257660:intron | 15.0% |
| !! | GTATGATTATTATATCTAAA+AGG | + | chr8_2:58271119-58271138 | Msa1257650:intron | 15.0% |
| !!! | ATAATGTTTGCTTTTATATA+TGG | + | chr8_2:58271222-58271241 | Msa1257650:intron | 15.0% |
| !!! | TTTTAAGTGTATATTGTTTA+TGG | + | chr8_2:58271388-58271407 | Msa1257650:intron | 15.0% |
| !!! | TTTTTATATTATTTTGTGTC+AGG | + | chr8_2:58271602-58271621 | Msa1257650:intron | 15.0% |
| !! | AAACAGAAATTGAAAAAAGA+AGG | + | chr8_2:58266952-58266971 | Msa1257650:five_prime_UTR | 20.0% |
| !! | AATGAAAATTGAATAGGATA+GGG | - | chr8_2:58267158-58267177 | None:intergenic | 20.0% |
| !! | AAATGAAAATTGAATAGGAT+AGG | - | chr8_2:58267159-58267178 | None:intergenic | 20.0% |
| !! | ATCCTAAATTTAAATCCATA+TGG | - | chr8_2:58267344-58267363 | None:intergenic | 20.0% |
| !! | ATATTCTATTTAGATCCTAT+GGG | + | chr8_2:58267584-58267603 | Msa1257650:intron | 20.0% |
| !! | TATAAAAGTTATCAAAGTCA+TGG | + | chr8_2:58267770-58267789 | Msa1257650:intron | 20.0% |
| !! | ATAAAGTGTAAAATAAGGAT+TGG | + | chr8_2:58268336-58268355 | Msa1257650:intron | 20.0% |
| !! | AATTTCTACTTGATTATTCA+GGG | - | chr8_2:58268939-58268958 | None:intergenic | 20.0% |
| !! | AAATTTCTACTTGATTATTC+AGG | - | chr8_2:58268940-58268959 | None:intergenic | 20.0% |
| !!! | CTTGTTTCATGTTTTATTTT+AGG | - | chr8_2:58269017-58269036 | None:intergenic | 20.0% |
| !! | AAACAATAGACATGTAAAAT+AGG | + | chr8_2:58269123-58269142 | Msa1257650:intron | 20.0% |
| !!! | TATAATTTTGTCTCTTTGAT+GGG | + | chr8_2:58269968-58269987 | Msa1257650:intron | 20.0% |
| !!! | AATATATTTTTACAATTCCC+AGG | - | chr8_2:58270206-58270225 | None:intergenic | 20.0% |
| !! | AGCATTAATTGCAAAATATT+TGG | - | chr8_2:58271576-58271595 | None:intergenic | 20.0% |
| !! | AAAAAGAAATAAACCAGATT+CGG | - | chr8_2:58271816-58271835 | None:intergenic | 20.0% |
| !! | CTCAATTTATCTAATCTTTA+TGG | + | chr8_2:58271886-58271905 | Msa1257650:three_prime_UTR | 20.0% |
| !!! | ATTTTTCTAGCAATCATATT+TGG | - | chr8_2:58271981-58272000 | None:intergenic | 20.0% |
| ! | CACCATATGGATTTAAATTT+AGG | + | chr8_2:58267339-58267358 | Msa1257650:intron | 25.0% |
| ! | TTGAAATTAGTATGAAGCAT+TGG | + | chr8_2:58267416-58267435 | Msa1257650:intron | 25.0% |
| ! | CATATTCTATTTAGATCCTA+TGG | + | chr8_2:58267583-58267602 | Msa1257650:intron | 25.0% |
| !!! | TTCCTTTTACTTTTGGTATA+TGG | - | chr8_2:58267812-58267831 | None:intergenic | 25.0% |
| !! | CATCATTTTCCTTTTACTTT+TGG | - | chr8_2:58267819-58267838 | None:intergenic | 25.0% |
| ! | CAAAAGTAAAAGGAAAATGA+TGG | + | chr8_2:58267817-58267836 | Msa1257650:intron | 25.0% |
| !! | AAATGATGGAGTTAAAAAAG+AGG | + | chr8_2:58267831-58267850 | Msa1257650:intron | 25.0% |
| !! | AATGATGGAGTTAAAAAAGA+GGG | + | chr8_2:58267832-58267851 | Msa1257650:intron | 25.0% |
| ! | AATTCAGTGTTATAAAATGG+CGG | - | chr8_2:58268048-58268067 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTCACTATTTGG+TGG | + | chr8_2:58268757-58268776 | Msa1257650:intron | 25.0% |
| ! | ATTTCTACTTGATTATTCAG+GGG | - | chr8_2:58268938-58268957 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTAGGATTAGTC+AGG | - | chr8_2:58269007-58269026 | None:intergenic | 25.0% |
| ! | TTATGCTGTAGAACTTAAAT+TGG | + | chr8_2:58269349-58269368 | Msa1257650:intron | 25.0% |
| !!! | ACTGAACATACACTTTTTTT+GGG | + | chr8_2:58269718-58269737 | Msa1257650:intron | 25.0% |
| !!! | TTTTTTATTAATTCCCACCA+CGG | - | chr8_2:58269831-58269850 | None:intergenic | 25.0% |
| !! | CTATAATTTTGTCTCTTTGA+TGG | + | chr8_2:58269967-58269986 | Msa1257650:intron | 25.0% |
| ! | CATTAATACATTTCTTACCT+GGG | - | chr8_2:58270090-58270109 | None:intergenic | 25.0% |
| ! | ATAGTATAGTTGAAACTTGA+AGG | + | chr8_2:58270302-58270321 | Msa1257650:intron | 25.0% |
| ! | TAGTATAGTTGAAACTTGAA+GGG | + | chr8_2:58270303-58270322 | Msa1257650:intron | 25.0% |
| !! | TTTATTCTGATAGGTTTTCT+GGG | + | chr8_2:58270326-58270345 | Msa1257650:intron | 25.0% |
| !!! | AATTCAAAACTTGTTTTGCA+GGG | - | chr8_2:58270411-58270430 | Msa1257660:intron | 25.0% |
| !!! | TGCAAAACAAGTTTTGAATT+GGG | + | chr8_2:58270411-58270430 | Msa1257650:intron | 25.0% |
| !! | TATGTTTATGTATTTGGGTT+TGG | + | chr8_2:58270619-58270638 | Msa1257650:intron | 25.0% |
| !! | AGTAACTAAGAAATTTTGTC+AGG | - | chr8_2:58270746-58270765 | Msa1257660:intron | 25.0% |
| !!! | CAGGTTTGGTAAATTATTTT+TGG | - | chr8_2:58270846-58270865 | Msa1257660:intron | 25.0% |
| ! | GTCGATAATATTTAAATGCA+AGG | - | chr8_2:58270940-58270959 | Msa1257660:intron | 25.0% |
| ! | TTGTCATATGGATAAACTTT+GGG | - | chr8_2:58271630-58271649 | None:intergenic | 25.0% |
| ! | ATTGTCATATGGATAAACTT+TGG | - | chr8_2:58271631-58271650 | None:intergenic | 25.0% |
| !! | AACACAAAAGTACAAATGAA+CGG | - | chr8_2:58271737-58271756 | None:intergenic | 25.0% |
| ! | AGATAAATTGAGCAGAATAA+TGG | - | chr8_2:58271878-58271897 | None:intergenic | 25.0% |
| !! | TGAAAAGTTCTTTTAATGCT+TGG | + | chr8_2:58272052-58272071 | Msa1257650:three_prime_UTR | 25.0% |
| !! | GAAAAGTTCTTTTAATGCTT+GGG | + | chr8_2:58272053-58272072 | Msa1257650:three_prime_UTR | 25.0% |
| ! | TAACCTCAATTTTCGAATTC+TGG | + | chr8_2:58267203-58267222 | Msa1257650:intron | 30.0% |
| !! | GGTAACTATTTTTCACCATA+TGG | + | chr8_2:58267326-58267345 | Msa1257650:intron | 30.0% |
| TTAACTTACAAATGGTGTCT+TGG | - | chr8_2:58267511-58267530 | None:intergenic | 30.0% | |
| AGAGCAAGTTAACTTACAAA+TGG | - | chr8_2:58267519-58267538 | None:intergenic | 30.0% | |
| TATGACAACACACAACAAAA+TGG | - | chr8_2:58267567-58267586 | None:intergenic | 30.0% | |
| TTGTTATCATTCTCTGATAG+TGG | + | chr8_2:58267626-58267645 | Msa1257650:intron | 30.0% | |
| TGCCATATACCAAAAGTAAA+AGG | + | chr8_2:58267807-58267826 | Msa1257650:intron | 30.0% | |
| TCCATAAGCAAATATGTGAA+GGG | - | chr8_2:58267983-58268002 | None:intergenic | 30.0% | |
| !! | TATTGGTTGGTTTGAAACAA+AGG | + | chr8_2:58268222-58268241 | Msa1257650:intron | 30.0% |
| GTTTCAAACTCTTATGTTTC+TGG | + | chr8_2:58268291-58268310 | Msa1257650:intron | 30.0% | |
| ! | TATTGATATCCCTCGATTTT+AGG | - | chr8_2:58268319-58268338 | None:intergenic | 30.0% |
| ATTGGAAAACTCAGATAGTA+GGG | + | chr8_2:58268354-58268373 | Msa1257650:intron | 30.0% | |
| ! | TGAGATAACAGACTAGTTAA+TGG | - | chr8_2:58268671-58268690 | None:intergenic | 30.0% |
| ! | TAACTAGTCTGTTATCTCAT+AGG | + | chr8_2:58268672-58268691 | Msa1257650:intron | 30.0% |
| !! | TAGAATGGATTGAGGAATAA+GGG | + | chr8_2:58268825-58268844 | Msa1257650:intron | 30.0% |
| GAAAGTGAGCTATTAAGATA+AGG | + | chr8_2:58268872-58268891 | Msa1257650:intron | 30.0% | |
| AGAAAATCAAATGCATCTCA+AGG | + | chr8_2:58269062-58269081 | Msa1257650:intron | 30.0% | |
| ATCTTAATTCTGAACGTAGA+AGG | + | chr8_2:58269148-58269167 | Msa1257650:intron | 30.0% | |
| AACAAACTCTTGTGTATGAT+AGG | - | chr8_2:58269184-58269203 | None:intergenic | 30.0% | |
| TTAGAATAAGAGTTTCAAGC+TGG | + | chr8_2:58269202-58269221 | Msa1257650:intron | 30.0% | |
| TAGAATAAGAGTTTCAAGCT+GGG | + | chr8_2:58269203-58269222 | Msa1257650:intron | 30.0% | |
| TTAACAACCAATGGTTGAAA+TGG | - | chr8_2:58269412-58269431 | None:intergenic | 30.0% | |
| !!! | CACTGAACATACACTTTTTT+TGG | + | chr8_2:58269717-58269736 | Msa1257650:intron | 30.0% |
| TGAGTAATTACTTCCCAATT+TGG | + | chr8_2:58269758-58269777 | Msa1257650:intron | 30.0% | |
| GAGTAATTACTTCCCAATTT+GGG | + | chr8_2:58269759-58269778 | Msa1257650:intron | 30.0% | |
| ! | ATAAAAAGAGTGTAGGTTGT+AGG | - | chr8_2:58270004-58270023 | None:intergenic | 30.0% |
| ! | TTTGGGTATAAAAAGAGTGT+AGG | - | chr8_2:58270011-58270030 | None:intergenic | 30.0% |
| ATGGTTGTCAAACTTCATTT+GGG | - | chr8_2:58270028-58270047 | None:intergenic | 30.0% | |
| GCATTAATACATTTCTTACC+TGG | - | chr8_2:58270091-58270110 | None:intergenic | 30.0% | |
| CAAAACAAAATATCTGCCTT+TGG | - | chr8_2:58270266-58270285 | Msa1257660:CDS | 30.0% | |
| !!! | AGGCAGATATTTTGTTTTGT+CGG | + | chr8_2:58270267-58270286 | Msa1257650:intron | 30.0% |
| ! | GTTTATTCTGATAGGTTTTC+TGG | + | chr8_2:58270325-58270344 | Msa1257650:intron | 30.0% |
| !!! | CAATTCAAAACTTGTTTTGC+AGG | - | chr8_2:58270412-58270431 | Msa1257660:intron | 30.0% |
| !!! | CTGCAAAACAAGTTTTGAAT+TGG | + | chr8_2:58270410-58270429 | Msa1257650:intron | 30.0% |
| !!! | ACAAGTTTTGAATTGGGATA+AGG | + | chr8_2:58270417-58270436 | Msa1257650:intron | 30.0% |
| TTCATAATTCGATAGCCATA+TGG | - | chr8_2:58270590-58270609 | Msa1257660:intron | 30.0% | |
| ! | TTATGTATTTGGGTTTGGTT+AGG | + | chr8_2:58270624-58270643 | Msa1257650:intron | 30.0% |
| AAAGAAAATAAACCTGTCAC+AGG | + | chr8_2:58270678-58270697 | Msa1257650:intron | 30.0% | |
| ! | AGAAATTTTGTCAGGTTTTG+TGG | - | chr8_2:58270738-58270757 | Msa1257660:intron | 30.0% |
| ATAATTTACCAAACCTGAAC+TGG | + | chr8_2:58270849-58270868 | Msa1257650:intron | 30.0% | |
| TATTATCGACAACTACCATA+TGG | + | chr8_2:58270950-58270969 | Msa1257650:intron | 30.0% | |
| GACATCTAAATTTATGTTGC+AGG | - | chr8_2:58271074-58271093 | Msa1257660:intron | 30.0% | |
| TATCTAAAAGGTTTGATGCT+TGG | + | chr8_2:58271131-58271150 | Msa1257650:intron | 30.0% | |
| AATTTAACATGGACATGTGT+TGG | + | chr8_2:58271190-58271209 | Msa1257650:intron | 30.0% | |
| ! | TGCTTTTATATATGGTGTGT+TGG | + | chr8_2:58271230-58271249 | Msa1257650:intron | 30.0% |
| TATCTGAAGGTAAAGATTTG+CGG | - | chr8_2:58271322-58271341 | Msa1257660:intron | 30.0% | |
| GTATAAGCATGAGTTCAATT+GGG | - | chr8_2:58271474-58271493 | None:intergenic | 30.0% | |
| AGTATAAGCATGAGTTCAAT+TGG | - | chr8_2:58271475-58271494 | None:intergenic | 30.0% | |
| TGTAAAGCTTCAAAACATGA+AGG | - | chr8_2:58271536-58271555 | None:intergenic | 30.0% | |
| ! | ACACAAAAGTACAAATGAAC+GGG | - | chr8_2:58271736-58271755 | None:intergenic | 30.0% |
| ATCTAATCTTTATGGAACTG+AGG | + | chr8_2:58271894-58271913 | Msa1257650:three_prime_UTR | 30.0% | |
| !! | ATCATATTTGGTGGTTTTTC+TGG | - | chr8_2:58271969-58271988 | None:intergenic | 30.0% |
| ! | TTTCTAGCAATCATATTTGG+TGG | - | chr8_2:58271978-58271997 | None:intergenic | 30.0% |
| ATTTCCAAAACGAAGTCGTT+TGG | + | chr8_2:58266892-58266911 | Msa1257650:five_prime_UTR | 35.0% | |
| ! | GTTTTTGTTACTGCAATCAC+AGG | - | chr8_2:58266918-58266937 | None:intergenic | 35.0% |
| AAGAATCGAAGCAATAACCA+TGG | + | chr8_2:58266984-58267003 | Msa1257650:exon | 35.0% | |
| AACGTAGCATCACAAATCTT+AGG | + | chr8_2:58267021-58267040 | Msa1257650:CDS | 35.0% | |
| TCACCAGAATTCGAAAATTG+AGG | - | chr8_2:58267209-58267228 | None:intergenic | 35.0% | |
| ! | CATGTTAGTTCTTCATTCAC+CGG | - | chr8_2:58267246-58267265 | None:intergenic | 35.0% |
| GGTGAATGAAGAACTAACAT+GGG | + | chr8_2:58267245-58267264 | Msa1257650:CDS | 35.0% | |
| TCTATACAAGGTTCAGGAAA+TGG | - | chr8_2:58267282-58267301 | None:intergenic | 35.0% | |
| !!! | CTCTCTCGATTTTTTGGATT+TGG | + | chr8_2:58267539-58267558 | Msa1257650:intron | 35.0% |
| CCATAAGCAAATATGTGAAG+GGG | - | chr8_2:58267982-58268001 | None:intergenic | 35.0% | |
| CTCCATAAGCAAATATGTGA+AGG | - | chr8_2:58267984-58268003 | None:intergenic | 35.0% | |
| CTTCACATATTTGCTTATGG+AGG | + | chr8_2:58267982-58268001 | Msa1257650:intron | 35.0% | |
| AGTAGTGTTCCACAAGTAAT+AGG | + | chr8_2:58268114-58268133 | Msa1257650:intron | 35.0% | |
| AGTAATAGGTGTGCTGAAAA+AGG | + | chr8_2:58268128-58268147 | Msa1257650:intron | 35.0% | |
| GTAATAGGTGTGCTGAAAAA+GGG | + | chr8_2:58268129-58268148 | Msa1257650:intron | 35.0% | |
| TAATAGGTGTGCTGAAAAAG+GGG | + | chr8_2:58268130-58268149 | Msa1257650:intron | 35.0% | |
| AATGAATGAACAGAGACCTT+TGG | + | chr8_2:58268154-58268173 | Msa1257650:intron | 35.0% | |
| ATGAGTAGTTGGTTATTGGT+TGG | + | chr8_2:58268209-58268228 | Msa1257650:intron | 35.0% | |
| ACAAAGGATGAGTGAATGAT+TGG | + | chr8_2:58268260-58268279 | Msa1257650:intron | 35.0% | |
| CAAAGGATGAGTGAATGATT+GGG | + | chr8_2:58268261-58268280 | Msa1257650:intron | 35.0% | |
| GATTGGAAAACTCAGATAGT+AGG | + | chr8_2:58268353-58268372 | Msa1257650:intron | 35.0% | |
| TTGGAAAACTCAGATAGTAG+GGG | + | chr8_2:58268355-58268374 | Msa1257650:intron | 35.0% | |
| ! | CGAGATAACAGACTAGTTAA+TGG | - | chr8_2:58268496-58268515 | None:intergenic | 35.0% |
| ! | TAACTAGTCTGTTATCTCGT+AGG | + | chr8_2:58268497-58268516 | Msa1257650:intron | 35.0% |
| TAGTCTGTTATCTCATAGGT+GGG | + | chr8_2:58268676-58268695 | Msa1257650:intron | 35.0% | |
| !! | ATGATTGTTGTTTCGAGTGA+GGG | + | chr8_2:58268796-58268815 | Msa1257650:intron | 35.0% |
| !! | GTAGAATGGATTGAGGAATA+AGG | + | chr8_2:58268824-58268843 | Msa1257650:intron | 35.0% |
| ! | CAAATTCCTAGGTTTTACCT+AGG | + | chr8_2:58269089-58269108 | Msa1257650:intron | 35.0% |
| AGAATAAGAGTTTCAAGCTG+GGG | + | chr8_2:58269204-58269223 | Msa1257650:intron | 35.0% | |
| AAGTTCTACAGCATAAACTC+AGG | - | chr8_2:58269345-58269364 | None:intergenic | 35.0% | |
| TCAACTACCATTTCAACCAT+TGG | + | chr8_2:58269402-58269421 | Msa1257650:intron | 35.0% | |
| ATCACACTCTTAACAACCAA+TGG | - | chr8_2:58269421-58269440 | None:intergenic | 35.0% | |
| TGTAAATGTGCATGTTGTTG+CGG | - | chr8_2:58269637-58269656 | None:intergenic | 35.0% | |
| !!! | ACACTTTTTTTGGGACAATG+TGG | + | chr8_2:58269727-58269746 | Msa1257650:intron | 35.0% |
| !!! | CACTTTTTTTGGGACAATGT+GGG | + | chr8_2:58269728-58269747 | Msa1257650:intron | 35.0% |
| AGATGAGAAGTTCCCAAATT+GGG | - | chr8_2:58269774-58269793 | None:intergenic | 35.0% | |
| TAGATGAGAAGTTCCCAAAT+TGG | - | chr8_2:58269775-58269794 | None:intergenic | 35.0% | |
| CATGGTTGTCAAACTTCATT+TGG | - | chr8_2:58270029-58270048 | None:intergenic | 35.0% | |
| !! | CACGTTGTTATTTGGAATCA+TGG | - | chr8_2:58270047-58270066 | None:intergenic | 35.0% |
| ! | TTAAGGGACACGTTGTTATT+TGG | - | chr8_2:58270055-58270074 | None:intergenic | 35.0% |
| CTTGAAGGGTTTATTCTGAT+AGG | + | chr8_2:58270317-58270336 | Msa1257650:intron | 35.0% | |
| AACTACATCATAACTGCCAT+CGG | + | chr8_2:58270487-58270506 | Msa1257650:intron | 35.0% | |
| CACATCTTCAATGTGAAGTA+CGG | - | chr8_2:58270515-58270534 | Msa1257660:intron | 35.0% | |
| CTTCACATTGAAGATGTGAT+TGG | + | chr8_2:58270517-58270536 | Msa1257650:intron | 35.0% | |
| ! | TTTCTAGGGAATAAGCCATA+TGG | + | chr8_2:58270572-58270591 | Msa1257650:intron | 35.0% |
| !! | AGCATTGACTTTAAGAGTCA+GGG | + | chr8_2:58270702-58270721 | Msa1257650:intron | 35.0% |
| !! | TTGTCAGGTTTTGTGGATTT+CGG | - | chr8_2:58270731-58270750 | Msa1257660:intron | 35.0% |
| !!! | TTATTTTTGGCAGCCTGAAA+TGG | - | chr8_2:58270833-58270852 | Msa1257660:intron | 35.0% |
| TTGCAATGAACACTACCATA+TGG | - | chr8_2:58270968-58270987 | Msa1257660:CDS | 35.0% | |
| TGTTCAATTCAGTAACAAGC+TGG | + | chr8_2:58270991-58271010 | Msa1257650:intron | 35.0% | |
| ! | TATATGGTGTGTTGGCAATT+TGG | + | chr8_2:58271238-58271257 | Msa1257650:intron | 35.0% |
| ! | AGAATGAACAACAAGTACTG+AGG | - | chr8_2:58271272-58271291 | Msa1257660:intron | 35.0% |
| !! | CAGTACTTGTTGTTCATTCT+TGG | + | chr8_2:58271272-58271291 | Msa1257650:intron | 35.0% |
| ACTAGACTAGGATTATCTGA+AGG | - | chr8_2:58271335-58271354 | Msa1257660:intron | 35.0% | |
| ! | AGATAATCCTAGTCTAGTTC+TGG | + | chr8_2:58271337-58271356 | Msa1257650:intron | 35.0% |
| CAACCATTGTATGGCAATAT+CGG | + | chr8_2:58271365-58271384 | Msa1257650:intron | 35.0% | |
| AAACCGATATTGCCATACAA+TGG | - | chr8_2:58271371-58271390 | Msa1257660:intron | 35.0% | |
| ATGAGTTCAATTGGGAATCA+TGG | - | chr8_2:58271466-58271485 | None:intergenic | 35.0% | |
| TTCAAATCCCATTATTGCCT+TGG | - | chr8_2:58271690-58271709 | None:intergenic | 35.0% | |
| TTTCATCATTCTCATGCTTC+TGG | + | chr8_2:58271835-58271854 | Msa1257650:three_prime_UTR | 35.0% | |
| ! | GTTTGTTAATCTACCTGCCA+TGG | - | chr8_2:58267004-58267023 | None:intergenic | 40.0% |
| GTAGCATCACAAATCTTAGG+CGG | + | chr8_2:58267024-58267043 | Msa1257650:CDS | 40.0% | |
| TCACAAATCTTAGGCGGAAA+CGG | + | chr8_2:58267030-58267049 | Msa1257650:CDS | 40.0% | |
| !! | AGAAACGAACGGGTTTGTTA+GGG | - | chr8_2:58267131-58267150 | None:intergenic | 40.0% |
| ATAGGGTAAGAGAAACGAAC+GGG | - | chr8_2:58267141-58267160 | None:intergenic | 40.0% | |
| GATAGGGTAAGAGAAACGAA+CGG | - | chr8_2:58267142-58267161 | None:intergenic | 40.0% | |
| !!! | GGTGATGTTTTTTCAGCTTC+CGG | + | chr8_2:58267224-58267243 | Msa1257650:intron | 40.0% |
| CGGTGAATGAAGAACTAACA+TGG | + | chr8_2:58267244-58267263 | Msa1257650:CDS | 40.0% | |
| GAAGAACTAACATGGGACAA+TGG | + | chr8_2:58267252-58267271 | Msa1257650:CDS | 40.0% | |
| ATGCGATCTATACAAGGTTC+AGG | - | chr8_2:58267288-58267307 | None:intergenic | 40.0% | |
| TCAGCAATGCGATCTATACA+AGG | - | chr8_2:58267294-58267313 | None:intergenic | 40.0% | |
| CATTGCTGATACTGTTGGAA+AGG | + | chr8_2:58267305-58267324 | Msa1257650:CDS | 40.0% | |
| !! | ATTAGTATGAAGCATTGGCG+TGG | + | chr8_2:58267421-58267440 | Msa1257650:intron | 40.0% |
| !! | TTTTGCGGGTTTGGGATTAT+TGG | + | chr8_2:58267464-58267483 | Msa1257650:CDS | 40.0% |
| !!! | TGCTCTCTCTCTCGATTTTT+TGG | + | chr8_2:58267533-58267552 | Msa1257650:intron | 40.0% |
| !! | TCATTCTCTGATAGTGGCAT+TGG | + | chr8_2:58267632-58267651 | Msa1257650:intron | 40.0% |
| TTATCAAAGTCATGGCCTGA+AGG | + | chr8_2:58267778-58267797 | Msa1257650:intron | 40.0% | |
| TATATGGCAATTGTGCCTTC+AGG | - | chr8_2:58267796-58267815 | None:intergenic | 40.0% | |
| !! | CATTCTGGCGTTGACAATAT+TGG | - | chr8_2:58267902-58267921 | None:intergenic | 40.0% |
| ! | CATGCTTATATGGCAGGTTT+TGG | - | chr8_2:58267926-58267945 | None:intergenic | 40.0% |
| CAATAGCATGCTTATATGGC+AGG | - | chr8_2:58267932-58267951 | None:intergenic | 40.0% | |
| GCCATATAAGCATGCTATTG+CGG | + | chr8_2:58267932-58267951 | Msa1257650:intron | 40.0% | |
| CCCCTTCACATATTTGCTTA+TGG | + | chr8_2:58267979-58267998 | Msa1257650:intron | 40.0% | |
| TTAACAGAGACATGTGTGAG+TGG | + | chr8_2:58268067-58268086 | Msa1257650:intron | 40.0% | |
| ATGTGTGAGTGGAGGTTTAT+GGG | + | chr8_2:58268078-58268097 | Msa1257650:intron | 40.0% | |
| TTCAGCACACCTATTACTTG+TGG | - | chr8_2:58268126-58268145 | None:intergenic | 40.0% | |
| AATAGGTGTGCTGAAAAAGG+GGG | + | chr8_2:58268131-58268150 | Msa1257650:intron | 40.0% | |
| GCTGATGAGTAGTTGGTTAT+TGG | + | chr8_2:58268205-58268224 | Msa1257650:intron | 40.0% | |
| ! | TTTCTGGTGCCTAAAATCGA+GGG | + | chr8_2:58268307-58268326 | Msa1257650:intron | 40.0% |
| ! | AATTTTGCGCTACAATGCGA+TGG | + | chr8_2:58268404-58268423 | Msa1257650:intron | 40.0% |
| !! | AGCACTATAGTGGATTCCAT+GGG | + | chr8_2:58268468-58268487 | Msa1257650:intron | 40.0% |
| TAGTCTGTTATCTCGTAGGT+GGG | + | chr8_2:58268501-58268520 | Msa1257650:intron | 40.0% | |
| CTATGAGTGTGCATCAAACA+AGG | - | chr8_2:58268530-58268549 | None:intergenic | 40.0% | |
| !! | AGCACTATAGTGGATTCCAT+GGG | + | chr8_2:58268468-58268487 | Msa1257650:intron | 40.0% |
| CTAGTCTGTTATCTCATAGG+TGG | + | chr8_2:58268675-58268694 | Msa1257650:intron | 40.0% | |
| AGTCTGTTATCTCATAGGTG+GGG | + | chr8_2:58268677-58268696 | Msa1257650:intron | 40.0% | |
| CTATGAGTGTGCATCAAACA+AGG | - | chr8_2:58268530-58268549 | None:intergenic | 40.0% | |
| !! | CATGATTGTTGTTTCGAGTG+AGG | + | chr8_2:58268795-58268814 | Msa1257650:intron | 40.0% |
| !! | GGAAAAGGTAGAATGGATTG+AGG | + | chr8_2:58268817-58268836 | Msa1257650:intron | 40.0% |
| TGGATTGAGGAATAAGGGTT+TGG | + | chr8_2:58268830-58268849 | Msa1257650:intron | 40.0% | |
| GGATTGAGGAATAAGGGTTT+GGG | + | chr8_2:58268831-58268850 | Msa1257650:intron | 40.0% | |
| GATTGAGGAATAAGGGTTTG+GGG | + | chr8_2:58268832-58268851 | Msa1257650:intron | 40.0% | |
| ATTGAGGAATAAGGGTTTGG+GGG | + | chr8_2:58268833-58268852 | Msa1257650:intron | 40.0% | |
| CTCAAGGTTGTCAAATTCCT+AGG | + | chr8_2:58269078-58269097 | Msa1257650:intron | 40.0% | |
| !! | TTGTTTTTCCAGTCAGTCCT+AGG | - | chr8_2:58269109-58269128 | None:intergenic | 40.0% |
| ! | AATTTTTATGCCGCTCCCAA+TGG | - | chr8_2:58269485-58269504 | None:intergenic | 40.0% |
| AGCGGCATAAAAATTGTGAG+AGG | + | chr8_2:58269490-58269509 | Msa1257650:intron | 40.0% | |
| GCATAAAAATTGTGAGAGGC+CGG | + | chr8_2:58269494-58269513 | Msa1257650:intron | 40.0% | |
| GTAAATGTGCATGTTGTTGC+GGG | - | chr8_2:58269636-58269655 | None:intergenic | 40.0% | |
| CAACATGCACATTTACAACC+CGG | + | chr8_2:58269640-58269659 | Msa1257650:intron | 40.0% | |
| AATCAAAAACGTGTGGAACC+GGG | - | chr8_2:58269661-58269680 | None:intergenic | 40.0% | |
| GAATCAAAAACGTGTGGAAC+CGG | - | chr8_2:58269662-58269681 | None:intergenic | 40.0% | |
| !! | GGTTCCACACGTTTTTGATT+CGG | + | chr8_2:58269661-58269680 | Msa1257650:intron | 40.0% |
| ACTTCCGAATCAAAAACGTG+TGG | - | chr8_2:58269668-58269687 | None:intergenic | 40.0% | |
| !!! | TTTTGATTCGGAAGTTGACC+CGG | + | chr8_2:58269673-58269692 | Msa1257650:intron | 40.0% |
| TCTTTGCAGTTATCATTCCG+TGG | + | chr8_2:58269811-58269830 | Msa1257650:intron | 40.0% | |
| AATACATTTCTTACCTGGGC+TGG | - | chr8_2:58270086-58270105 | None:intergenic | 40.0% | |
| ! | TTGCAATTCTCTGGCTTACA+GGG | - | chr8_2:58270133-58270152 | None:intergenic | 40.0% |
| TAAGTAGCAGCTCTACAATC+CGG | + | chr8_2:58270173-58270192 | Msa1257650:intron | 40.0% | |
| TTGCAATACGTAGCAACCAA+AGG | + | chr8_2:58270247-58270266 | Msa1257650:intron | 40.0% | |
| GGGATAAGGATCATTCAAGA+TGG | + | chr8_2:58270431-58270450 | Msa1257650:intron | 40.0% | |
| !! | CAGCATTGACTTTAAGAGTC+AGG | + | chr8_2:58270701-58270720 | Msa1257650:intron | 40.0% |
| GTATGTCATCAGACCATTTC+AGG | + | chr8_2:58270817-58270836 | Msa1257650:intron | 40.0% | |
| ACAATCAGCAGCTATGTTTC+AGG | - | chr8_2:58271020-58271039 | Msa1257660:CDS | 40.0% | |
| TGATTGTATCCAACTTTGCC+TGG | + | chr8_2:58271033-58271052 | Msa1257650:intron | 40.0% | |
| GTAATTCTACCAGGCAAAGT+TGG | - | chr8_2:58271045-58271064 | Msa1257660:intron | 40.0% | |
| AGGTCAGTTGTAATTCTACC+AGG | - | chr8_2:58271054-58271073 | Msa1257660:intron | 40.0% | |
| TGAGAAACCAGAACTAGACT+AGG | - | chr8_2:58271347-58271366 | Msa1257660:intron | 40.0% | |
| CTGGTTTCTCAACCATTGTA+TGG | + | chr8_2:58271356-58271375 | Msa1257650:intron | 40.0% | |
| AGGTTATATGGACCATGACA+AGG | - | chr8_2:58271443-58271462 | Msa1257660:intron | 40.0% | |
| TGGGAATCATGGAGGTTATA+TGG | - | chr8_2:58271455-58271474 | None:intergenic | 40.0% | |
| AGTTCAATTGGGAATCATGG+AGG | - | chr8_2:58271463-58271482 | None:intergenic | 40.0% | |
| TATTGCCTTGGATCTACCTA+TGG | - | chr8_2:58271678-58271697 | None:intergenic | 40.0% | |
| AGGTAGATCCAAGGCAATAA+TGG | + | chr8_2:58271679-58271698 | Msa1257650:exon | 40.0% | |
| GGTAGATCCAAGGCAATAAT+GGG | + | chr8_2:58271680-58271699 | Msa1257650:exon | 40.0% | |
| ATCGAAGCAATAACCATGGC+AGG | + | chr8_2:58266988-58267007 | Msa1257650:exon | 45.0% | |
| ! | GAGAAACGAACGGGTTTGTT+AGG | - | chr8_2:58267132-58267151 | None:intergenic | 45.0% |
| GATCGCATTGCTGATACTGT+TGG | + | chr8_2:58267300-58267319 | Msa1257650:CDS | 45.0% | |
| !! | TGGAGGATTGAGCTGTTTTG+CGG | + | chr8_2:58267449-58267468 | Msa1257650:CDS | 45.0% |
| !! | ATTGAGCTGTTTTGCGGGTT+TGG | + | chr8_2:58267455-58267474 | Msa1257650:CDS | 45.0% |
| !! | TTGAGCTGTTTTGCGGGTTT+GGG | + | chr8_2:58267456-58267475 | Msa1257650:CDS | 45.0% |
| ! | GTTTGGGATTATTGGCTGTG+TGG | + | chr8_2:58267472-58267491 | Msa1257650:CDS | 45.0% |
| TCCTATGGGTGCATTGTCTA+TGG | + | chr8_2:58267598-58267617 | Msa1257650:intron | 45.0% | |
| ACCATAGACAATGCACCCAT+AGG | - | chr8_2:58267602-58267621 | None:intergenic | 45.0% | |
| !!! | ATGGCAGGTTTTGGACATTC+TGG | - | chr8_2:58267917-58267936 | None:intergenic | 45.0% |
| GCCGCAATAGCATGCTTATA+TGG | - | chr8_2:58267936-58267955 | None:intergenic | 45.0% | |
| ATGGAGGAATGTCATGGTGA+TGG | - | chr8_2:58268023-58268042 | None:intergenic | 45.0% | |
| ATCACCATGACATTCCTCCA+TGG | + | chr8_2:58268022-58268041 | Msa1257650:intron | 45.0% | |
| TTATAAAATGGCGGCCATGG+AGG | - | chr8_2:58268039-58268058 | None:intergenic | 45.0% | |
| GTGTTATAAAATGGCGGCCA+TGG | - | chr8_2:58268042-58268061 | None:intergenic | 45.0% | |
| CATGTGTGAGTGGAGGTTTA+TGG | + | chr8_2:58268077-58268096 | Msa1257650:intron | 45.0% | |
| GAATGAACAGAGACCTTTGG+TGG | + | chr8_2:58268157-58268176 | Msa1257650:intron | 45.0% | |
| ! | CAAGCAGTGTTTTCCACCAA+AGG | - | chr8_2:58268173-58268192 | None:intergenic | 45.0% |
| CTTTGGTGGAAAACACTGCT+TGG | + | chr8_2:58268171-58268190 | Msa1257650:intron | 45.0% | |
| AAGCGATGCTGATGAGTAGT+TGG | + | chr8_2:58268198-58268217 | Msa1257650:intron | 45.0% | |
| TGAGTGAATGATTGGGTCGA+AGG | + | chr8_2:58268268-58268287 | Msa1257650:intron | 45.0% | |
| GAGTGAATGATTGGGTCGAA+GGG | + | chr8_2:58268269-58268288 | Msa1257650:intron | 45.0% | |
| !! | GTTTCTGGTGCCTAAAATCG+AGG | + | chr8_2:58268306-58268325 | Msa1257650:intron | 45.0% |
| ATGCGATGGACACCTTACAT+TGG | + | chr8_2:58268418-58268437 | Msa1257650:intron | 45.0% | |
| TTTCCACTCCAGCACTATAG+TGG | + | chr8_2:58268458-58268477 | Msa1257650:intron | 45.0% | |
| ! | AATCCACTATAGTGCTGGAG+TGG | - | chr8_2:58268464-58268483 | None:intergenic | 45.0% |
| CATGGAATCCACTATAGTGC+TGG | - | chr8_2:58268469-58268488 | None:intergenic | 45.0% | |
| !! | CAGCACTATAGTGGATTCCA+TGG | + | chr8_2:58268467-58268486 | Msa1257650:intron | 45.0% |
| ! | AGACTAGTTAATGGCACCCA+TGG | - | chr8_2:58268487-58268506 | None:intergenic | 45.0% |
| CTAGTCTGTTATCTCGTAGG+TGG | + | chr8_2:58268500-58268519 | Msa1257650:intron | 45.0% | |
| AGTCTGTTATCTCGTAGGTG+GGG | + | chr8_2:58268502-58268521 | Msa1257650:intron | 45.0% | |
| ATCGCATTGTAGCGCAAACA+AGG | - | chr8_2:58268580-58268599 | None:intergenic | 45.0% | |
| TTGTTTGCGCTACAATGCGA+TGG | + | chr8_2:58268579-58268598 | Msa1257650:intron | 45.0% | |
| TTTCCACTCCAGCACTATAG+TGG | + | chr8_2:58268458-58268477 | Msa1257650:intron | 45.0% | |
| ! | AATCCACTATAGTGCTGGAG+TGG | - | chr8_2:58268464-58268483 | None:intergenic | 45.0% |
| CATGGAATCCACTATAGTGC+TGG | - | chr8_2:58268469-58268488 | None:intergenic | 45.0% | |
| !! | CAGCACTATAGTGGATTCCA+TGG | + | chr8_2:58268467-58268486 | Msa1257650:intron | 45.0% |
| ! | AGACTAGTTAATGGCACCCA+TGG | - | chr8_2:58268487-58268506 | None:intergenic | 45.0% |
| ! | GTTGTTTCGAGTGAGGGAAA+AGG | + | chr8_2:58268802-58268821 | Msa1257650:intron | 45.0% |
| GAGTGAGGGAAAAGGTAGAA+TGG | + | chr8_2:58268810-58268829 | Msa1257650:intron | 45.0% | |
| GTCAGTCCTAGGTAAAACCT+AGG | - | chr8_2:58269098-58269117 | None:intergenic | 45.0% | |
| ! | AGGTTTTACCTAGGACTGAC+TGG | + | chr8_2:58269098-58269117 | Msa1257650:intron | 45.0% |
| GTCGTAATCATGCCTCACAA+TGG | + | chr8_2:58269317-58269336 | Msa1257650:intron | 45.0% | |
| !! | TAAACTCAGGTGCCATTGTG+AGG | - | chr8_2:58269332-58269351 | None:intergenic | 45.0% |
| ! | ACGTGTTTTTCTCCCTCCAT+TGG | + | chr8_2:58269466-58269485 | Msa1257650:intron | 45.0% |
| ! | CGTGTTTTTCTCCCTCCATT+GGG | + | chr8_2:58269467-58269486 | Msa1257650:intron | 45.0% |
| AGAGGAAGATCGTGGAATTG+AGG | + | chr8_2:58269531-58269550 | Msa1257650:intron | 45.0% | |
| GAGGAAGATCGTGGAATTGA+GGG | + | chr8_2:58269532-58269551 | Msa1257650:intron | 45.0% | |
| TCCCTCTTTGCAATGAGAAC+CGG | - | chr8_2:58269695-58269714 | None:intergenic | 45.0% | |
| TTGCAGTTATCATTCCGTGG+TGG | + | chr8_2:58269814-58269833 | Msa1257650:intron | 45.0% | |
| TGCAGTTATCATTCCGTGGT+GGG | + | chr8_2:58269815-58269834 | Msa1257650:intron | 45.0% | |
| ! | GTTGCAATTCTCTGGCTTAC+AGG | - | chr8_2:58270134-58270153 | None:intergenic | 45.0% |
| GACTGGATGTTGCAATTCTC+TGG | - | chr8_2:58270142-58270161 | None:intergenic | 45.0% | |
| ! | GGATTGTAGAGCTGCTACTT+AGG | - | chr8_2:58270174-58270193 | None:intergenic | 45.0% |
| TACAATCCGGACATTGACCT+GGG | + | chr8_2:58270186-58270205 | Msa1257650:intron | 45.0% | |
| ACAATTCCCAGGTCAATGTC+CGG | - | chr8_2:58270195-58270214 | None:intergenic | 45.0% | |
| ! | TAGGTTTTCTGGGTTTCAGC+TGG | + | chr8_2:58270336-58270355 | Msa1257650:intron | 45.0% |
| ! | AGGTTTTCTGGGTTTCAGCT+GGG | + | chr8_2:58270337-58270356 | Msa1257650:intron | 45.0% |
| CCTAGCTGATGCACAAAATC+TGG | - | chr8_2:58270369-58270388 | Msa1257660:CDS | 45.0% | |
| ! | CCAGATTTTGTGCATCAGCT+AGG | + | chr8_2:58270366-58270385 | Msa1257650:intron | 45.0% |
| TGTGCATCAGCTAGGATTGT+TGG | + | chr8_2:58270374-58270393 | Msa1257650:intron | 45.0% | |
| GTGCATCAGCTAGGATTGTT+GGG | + | chr8_2:58270375-58270394 | Msa1257650:intron | 45.0% | |
| AATGTGAAGTACGGATCCGA+TGG | - | chr8_2:58270506-58270525 | Msa1257660:intron | 45.0% | |
| ! | TCTTTTCGACCAAAGCGAGA+AGG | - | chr8_2:58270663-58270682 | Msa1257660:intron | 45.0% |
| GCTATCATTCAATCGAGCCA+GGG | - | chr8_2:58270896-58270915 | Msa1257660:intron | 45.0% | |
| TGCTATCATTCAATCGAGCC+AGG | - | chr8_2:58270897-58270916 | Msa1257660:intron | 45.0% | |
| TGCTCCTTGTATCCTTGTCA+TGG | + | chr8_2:58271428-58271447 | Msa1257650:intron | 45.0% | |
| TGGACCATGACAAGGATACA+AGG | - | chr8_2:58271435-58271454 | Msa1257660:intron | 45.0% | |
| TCCATATGACAATCTGCGAG+TGG | + | chr8_2:58271638-58271657 | Msa1257650:CDS | 45.0% | |
| TCCACTCGCAGATTGTCATA+TGG | - | chr8_2:58271642-58271661 | None:intergenic | 45.0% | |
| GTGAACCATAGGTAGATCCA+AGG | + | chr8_2:58271670-58271689 | Msa1257650:exon | 45.0% | |
| !! | GACTTGCTGAAACCAAGTAC+AGG | + | chr8_2:58271780-58271799 | Msa1257650:three_prime_UTR | 45.0% |
| CATCATTCTCATGCTTCTGG+TGG | + | chr8_2:58271838-58271857 | Msa1257650:three_prime_UTR | 45.0% | |
| TTCTGGTGGCTATAGTCAGT+TGG | + | chr8_2:58271852-58271871 | Msa1257650:three_prime_UTR | 45.0% | |
| ! | CAGGCCAAACGACTTCGTTT+TGG | - | chr8_2:58266899-58266918 | None:intergenic | 50.0% |
| GGAGGGATGAAGCTACAGAT+CGG | - | chr8_2:58267065-58267084 | None:intergenic | 50.0% | |
| ! | GGACGTAGTGTTTTCCGACA+GGG | - | chr8_2:58267110-58267129 | None:intergenic | 50.0% |
| !! | GGAGGATTGAGCTGTTTTGC+GGG | + | chr8_2:58267450-58267469 | Msa1257650:CDS | 50.0% |
| !! | GAGGAATGTCATGGTGATGG+TGG | - | chr8_2:58268020-58268039 | None:intergenic | 50.0% |
| ACAGAGACATGTGTGAGTGG+AGG | + | chr8_2:58268070-58268089 | Msa1257650:intron | 50.0% | |
| GTCAGCTCAGCTTAGCACAA+AGG | + | chr8_2:58268244-58268263 | Msa1257650:intron | 50.0% | |
| ! | TGGACACCTTACATTGGCCT+TGG | + | chr8_2:58268424-58268443 | Msa1257650:intron | 50.0% |
| !! | GGACACCTTACATTGGCCTT+GGG | + | chr8_2:58268425-58268444 | Msa1257650:intron | 50.0% |
| !! | ACCTTACATTGGCCTTGGGT+AGG | + | chr8_2:58268429-58268448 | Msa1257650:intron | 50.0% |
| ACCTACCCAAGGCCAATGTA+AGG | - | chr8_2:58268433-58268452 | None:intergenic | 50.0% | |
| !! | TACATTGGCCTTGGGTAGGT+TGG | + | chr8_2:58268433-58268452 | Msa1257650:intron | 50.0% |
| !! | ACATTGGCCTTGGGTAGGTT+GGG | + | chr8_2:58268434-58268453 | Msa1257650:intron | 50.0% |
| ATAAGGGTTTGGGGGAGTGA+AGG | + | chr8_2:58268841-58268860 | Msa1257650:intron | 50.0% | |
| ! | TTTTCTCCCTCCATTGGGAG+CGG | + | chr8_2:58269472-58269491 | Msa1257650:intron | 50.0% |
| TTTATGCCGCTCCCAATGGA+GGG | - | chr8_2:58269481-58269500 | None:intergenic | 50.0% | |
| ! | TTTTATGCCGCTCCCAATGG+AGG | - | chr8_2:58269482-58269501 | None:intergenic | 50.0% |
| AGCAATGCTTTCTCTCGTGC+TGG | + | chr8_2:58269555-58269574 | Msa1257650:intron | 50.0% | |
| CGGGTCAAAACTGTTCACTC+GGG | - | chr8_2:58269617-58269636 | None:intergenic | 50.0% | |
| GCGGGTCAAAACTGTTCACT+CGG | - | chr8_2:58269618-58269637 | None:intergenic | 50.0% | |
| ACCCGGTTCTCATTGCAAAG+AGG | + | chr8_2:58269690-58269709 | Msa1257650:intron | 50.0% | |
| CCCTCTTTGCAATGAGAACC+GGG | - | chr8_2:58269694-58269713 | None:intergenic | 50.0% | |
| CCCGGTTCTCATTGCAAAGA+GGG | + | chr8_2:58269691-58269710 | Msa1257650:intron | 50.0% | |
| !! | TGGGCTGGTGGATGCTTTAA+GGG | - | chr8_2:58270071-58270090 | None:intergenic | 50.0% |
| ! | ACATTTCTTACCTGGGCTGG+TGG | - | chr8_2:58270083-58270102 | None:intergenic | 50.0% |
| ! | AGAGCTGCTACTTAGGTGCT+GGG | - | chr8_2:58270167-58270186 | None:intergenic | 50.0% |
| ! | TAGAGCTGCTACTTAGGTGC+TGG | - | chr8_2:58270168-58270187 | None:intergenic | 50.0% |
| CTACAATCCGGACATTGACC+TGG | + | chr8_2:58270185-58270204 | Msa1257650:intron | 50.0% | |
| ! | GGTTTGGTTAGGTCTGCTCT+AGG | + | chr8_2:58270635-58270654 | Msa1257650:intron | 50.0% |
| AAGTCAATGCTGCCTGTGAC+AGG | - | chr8_2:58270693-58270712 | Msa1257660:intron | 50.0% | |
| GGATTTAACGTAGCTGGGTC+AGG | - | chr8_2:58270875-58270894 | Msa1257660:intron | 50.0% | |
| ACCCAGCTACGTTAAATCCC+TGG | + | chr8_2:58270876-58270895 | Msa1257650:intron | 50.0% | |
| GCCAGGGATTTAACGTAGCT+GGG | - | chr8_2:58270880-58270899 | Msa1257660:intron | 50.0% | |
| AGCCAGGGATTTAACGTAGC+TGG | - | chr8_2:58270881-58270900 | Msa1257660:intron | 50.0% | |
| AGATTTGCGGCATGATCGAC+TGG | - | chr8_2:58271309-58271328 | Msa1257660:intron | 50.0% | |
| GGCTCTTCGATTCCTGTACT+TGG | - | chr8_2:58271795-58271814 | None:intergenic | 50.0% | |
| AGGAATCGAAGAGCCGAATC+TGG | + | chr8_2:58271800-58271819 | Msa1257650:three_prime_UTR | 50.0% | |
| ! | GGGACGTAGTGTTTTCCGAC+AGG | - | chr8_2:58267111-58267130 | None:intergenic | 55.0% |
| !! | GAAGCATTGGCGTGGCTTTG+TGG | + | chr8_2:58267429-58267448 | Msa1257650:CDS | 55.0% |
| AAGCATGCTATTGCGGCCGT+TGG | + | chr8_2:58267939-58267958 | Msa1257650:intron | 55.0% | |
| !! | CATTGGCCTTGGGTAGGTTG+GGG | + | chr8_2:58268435-58268454 | Msa1257650:intron | 55.0% |
| TGGAAACCCCAACCTACCCA+AGG | - | chr8_2:58268444-58268463 | None:intergenic | 55.0% | |
| ATGCGATGGACCCCTTACAC+TGG | + | chr8_2:58268593-58268612 | Msa1257650:intron | 55.0% | |
| CTACCCAAGGCCAGTGTAAG+GGG | - | chr8_2:58268606-58268625 | None:intergenic | 55.0% | |
| CCTACCCAAGGCCAGTGTAA+GGG | - | chr8_2:58268607-58268626 | None:intergenic | 55.0% | |
| ACCTACCCAAGGCCAGTGTA+AGG | - | chr8_2:58268608-58268627 | None:intergenic | 55.0% | |
| !! | TACACTGGCCTTGGGTAGGT+TGG | + | chr8_2:58268608-58268627 | Msa1257650:intron | 55.0% |
| !! | ACACTGGCCTTGGGTAGGTT+GGG | + | chr8_2:58268609-58268628 | Msa1257650:intron | 55.0% |
| TGGAAACCCCAACCTACCCA+AGG | - | chr8_2:58268444-58268463 | None:intergenic | 55.0% | |
| TCTTGCCCCGATTTCTCACG+TGG | + | chr8_2:58269588-58269607 | Msa1257650:intron | 55.0% | |
| GGTCACCACGTGAGAAATCG+GGG | - | chr8_2:58269596-58269615 | None:intergenic | 55.0% | |
| GGGTCACCACGTGAGAAATC+GGG | - | chr8_2:58269597-58269616 | None:intergenic | 55.0% | |
| CGGGTCACCACGTGAGAAAT+CGG | - | chr8_2:58269598-58269617 | None:intergenic | 55.0% | |
| !! | CTGGGCTGGTGGATGCTTTA+AGG | - | chr8_2:58270072-58270091 | None:intergenic | 55.0% |
| ! | CTTAAAGCATCCACCAGCCC+AGG | + | chr8_2:58270070-58270089 | Msa1257650:intron | 55.0% |
| ! | ATGCAGCACTGAGAAGCGCA+AGG | + | chr8_2:58270107-58270126 | Msa1257650:intron | 55.0% |
| !! | TACTTAGGTGCTGGGAGGAC+TGG | - | chr8_2:58270159-58270178 | None:intergenic | 55.0% |
| CTCTAGGCACCTTCTCGCTT+TGG | + | chr8_2:58270651-58270670 | Msa1257650:intron | 55.0% | |
| TTGCGGCATGATCGACTGGA+TGG | - | chr8_2:58271305-58271324 | Msa1257660:intron | 55.0% | |
| GACAATCTGCGAGTGGAGCT+TGG | + | chr8_2:58271645-58271664 | Msa1257650:CDS | 55.0% | |
| AATCTGCGAGTGGAGCTTGG+TGG | + | chr8_2:58271648-58271667 | Msa1257650:CDS | 55.0% | |
| !! | GGAGCTTGGTGGTGAACCAT+AGG | + | chr8_2:58271659-58271678 | Msa1257650:CDS | 55.0% |
| !! | GCATTGGCGTGGCTTTGTGG+AGG | + | chr8_2:58267432-58267451 | Msa1257650:CDS | 60.0% |
| GGCCGTTGGCACCATCATGA+CGG | + | chr8_2:58267953-58267972 | Msa1257650:intron | 60.0% | |
| GCCGTTGGCACCATCATGAC+GGG | + | chr8_2:58267954-58267973 | Msa1257650:intron | 60.0% | |
| ! | GCCCGTCATGATGGTGCCAA+CGG | - | chr8_2:58267958-58267977 | None:intergenic | 60.0% |
| !! | TGAAGGGGTGCCCGTCATGA+TGG | - | chr8_2:58267967-58267986 | None:intergenic | 60.0% |
| GCGGCCATGGAGGAATGTCA+TGG | - | chr8_2:58268029-58268048 | None:intergenic | 60.0% | |
| ! | TGGACCCCTTACACTGGCCT+TGG | + | chr8_2:58268599-58268618 | Msa1257650:intron | 60.0% |
| !! | GGACCCCTTACACTGGCCTT+GGG | + | chr8_2:58268600-58268619 | Msa1257650:intron | 60.0% |
| !! | CCCTTACACTGGCCTTGGGT+AGG | + | chr8_2:58268604-58268623 | Msa1257650:intron | 60.0% |
| !! | CACTGGCCTTGGGTAGGTTG+GGG | + | chr8_2:58268610-58268629 | Msa1257650:intron | 60.0% |
| !! | GCTGCTACTTAGGTGCTGGG+AGG | - | chr8_2:58270164-58270183 | None:intergenic | 60.0% |
| ! | GGGTCAGGCCAGTTCAGGTT+TGG | - | chr8_2:58270860-58270879 | Msa1257660:intron | 60.0% |
| TAGCTGGGTCAGGCCAGTTC+AGG | - | chr8_2:58270865-58270884 | Msa1257660:intron | 60.0% | |
| TCATCCCTCCGCCTTCGCTC+CGG | + | chr8_2:58267075-58267094 | Msa1257650:CDS | 65.0% | |
| TCCGGCATGGGTCTCCCTGT+CGG | + | chr8_2:58267093-58267112 | Msa1257650:CDS | 65.0% | |
| TCCGACAGGGAGACCCATGC+CGG | - | chr8_2:58267097-58267116 | None:intergenic | 65.0% | |
| GAGCGCGCAGAGGAAGATCG+TGG | + | chr8_2:58269523-58269542 | Msa1257650:intron | 65.0% | |
| CATGCCGGAGCGAAGGCGGA+GGG | - | chr8_2:58267082-58267101 | None:intergenic | 70.0% | |
| CTCCGCCTTCGCTCCGGCAT+GGG | + | chr8_2:58267081-58267100 | Msa1257650:CDS | 70.0% | |
| GACCCATGCCGGAGCGAAGG+CGG | - | chr8_2:58267086-58267105 | None:intergenic | 70.0% | |
| GGAGACCCATGCCGGAGCGA+AGG | - | chr8_2:58267089-58267108 | None:intergenic | 70.0% | |
| CCTCTGCGCGCTCACTGCTC+CGG | - | chr8_2:58269516-58269535 | None:intergenic | 70.0% | |
| CCATGCCGGAGCGAAGGCGG+AGG | - | chr8_2:58267083-58267102 | None:intergenic | 75.0% | |
| CCTCCGCCTTCGCTCCGGCA+TGG | + | chr8_2:58267080-58267099 | Msa1257650:CDS | 75.0% | |
| CCGGAGCAGTGAGCGCGCAG+AGG | + | chr8_2:58269513-58269532 | Msa1257650:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58266889 | 58272125 | 58266889 | ID=Msa1257650;Name=Msa1257650 |
| chr8_2 | mRNA | 58266889 | 58272125 | 58266889 | ID=Msa1257650-mRNA-1;Parent=Msa1257650;Name=Msa1257650-mRNA-1;_AED=0.09;_eAED=0.09;_QI=114|1|1|1|0.66|0.75|4|445|125 |
| chr8_2 | exon | 58266889 | 58267140 | 58266889 | ID=Msa1257650-mRNA-1:exon:18049;Parent=Msa1257650-mRNA-1 |
| chr8_2 | exon | 58267240 | 58267326 | 58267240 | ID=Msa1257650-mRNA-1:exon:18050;Parent=Msa1257650-mRNA-1 |
| chr8_2 | exon | 58267426 | 58267521 | 58267426 | ID=Msa1257650-mRNA-1:exon:18051;Parent=Msa1257650-mRNA-1 |
| chr8_2 | exon | 58271624 | 58272125 | 58271624 | ID=Msa1257650-mRNA-1:exon:18052;Parent=Msa1257650-mRNA-1 |
| chr8_2 | five_prime_UTR | 58266889 | 58267002 | 58266889 | ID=Msa1257650-mRNA-1:five_prime_utr;Parent=Msa1257650-mRNA-1 |
| chr8_2 | CDS | 58267003 | 58267140 | 58267003 | ID=Msa1257650-mRNA-1:cds;Parent=Msa1257650-mRNA-1 |
| chr8_2 | CDS | 58267240 | 58267326 | 58267240 | ID=Msa1257650-mRNA-1:cds;Parent=Msa1257650-mRNA-1 |
| chr8_2 | CDS | 58267426 | 58267521 | 58267426 | ID=Msa1257650-mRNA-1:cds;Parent=Msa1257650-mRNA-1 |
| chr8_2 | CDS | 58271624 | 58271680 | 58271624 | ID=Msa1257650-mRNA-1:cds;Parent=Msa1257650-mRNA-1 |
| chr8_2 | three_prime_UTR | 58271681 | 58272125 | 58271681 | ID=Msa1257650-mRNA-1:three_prime_utr;Parent=Msa1257650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
