AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257800 MtrunA17_Chr4g0056331 98.400 125 2 0 1 125 1 125 4.65e-89 254
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257800 AT5G47570.1 81.600 125 23 0 1 125 1 125 2.46e-63 189

Find 57 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATTTATCTAATCTTTA+TGG 0.045452 8_2:+58686160 Msa1257800:three_prime_UTR
TTTCATCATTCTCATGCTTC+TGG 0.236372 8_2:+58686109 Msa1257800:three_prime_UTR
GAGAAACGAACGGGTTTGTT+AGG 0.253010 8_2:-58681590 None:intergenic
CAGGCCAAACGACTTCGTTT+TGG 0.306817 8_2:-58681352 None:intergenic
GGCTCTTCGATTCCTGTACT+TGG 0.344379 8_2:-58686066 None:intergenic
AGGTAGATCCAAGACAATAA+TGG 0.350759 8_2:+58685954 Msa1257800:exon
TTCAAATCCCATTATTGTCT+TGG 0.359893 8_2:-58685962 None:intergenic
CTCCGCCTCCGCTCCGGCAT+GGG 0.379300 8_2:+58681542 Msa1257800:CDS
TTGTCATATGGATAAACTTT+GGG 0.382238 8_2:-58685902 None:intergenic
GGTAGATCCAAGACAATAAT+GGG 0.398192 8_2:+58685955 Msa1257800:exon
AGATAAATTGAGCAGAATAA+TGG 0.400505 8_2:-58686149 None:intergenic
ATTTCCAAAACGAAGTCGTT+TGG 0.401582 8_2:+58681348 Msa1257800:five_prime_UTR
TCTATACAAGGTTCAGGAAA+TGG 0.408392 8_2:-58681740 None:intergenic
ATGCGATCTATACAAGGTTC+AGG 0.410095 8_2:-58681746 None:intergenic
TATTGTCTTGGATCTACCTA+TGG 0.415342 8_2:-58685950 None:intergenic
GAAGCATTGGCGTGGCTTTG+TGG 0.425668 8_2:+58681896 Msa1257800:CDS
AGAAACGAACGGGTTTGTTA+GGG 0.426104 8_2:-58681589 None:intergenic
CCTCCGCCTCCGCTCCGGCA+TGG 0.434356 8_2:+58681541 Msa1257800:CDS
CCATGCCGGAGCGGAGGCGG+AGG 0.448743 8_2:-58681541 None:intergenic
TTAACTTACAAATGGTGTCT+TGG 0.464926 8_2:-58681975 None:intergenic
ATTGTCATATGGATAAACTT+TGG 0.466688 8_2:-58685903 None:intergenic
AGGAATCGAAGAGCCGAATC+TGG 0.473800 8_2:+58686074 Msa1257800:three_prime_UTR
ATTTCTCTACGCAGAATGCT+TGG 0.473875 8_2:+58686379 Msa1257800:three_prime_UTR
CATGTTAGTTCTTCATTCAC+CGG 0.487264 8_2:-58681704 None:intergenic
GATCGCATTGCTGATACTGT+TGG 0.491226 8_2:+58681761 Msa1257800:CDS
CATCATTCTCATGCTTCTGG+TGG 0.499841 8_2:+58686112 Msa1257800:three_prime_UTR
TTTCTAGCAATCATATTTGG+TGG 0.500363 8_2:-58686249 None:intergenic
ATCGAAGCAATAACCATGGC+AGG 0.504944 8_2:+58681449 Msa1257800:exon
TCATCCCTCCGCCTCCGCTC+CGG 0.507694 8_2:+58681536 Msa1257800:CDS
TCCGACAGGGAGACCCATGC+CGG 0.522170 8_2:-58681555 None:intergenic
TGTTACTGCAATGCAATCAC+AGG 0.524800 8_2:-58681371 None:intergenic
TTGAAATTAGTATGAAGCAT+TGG 0.528117 8_2:+58681883 Msa1257800:intron
CGGTGAATGAAGAACTAACA+TGG 0.534935 8_2:+58681705 Msa1257800:CDS
TCCACTCGCAGATTGTCATA+TGG 0.536750 8_2:-58685914 None:intergenic
GGAGCTTGGTGGTGAACCAT+AGG 0.538851 8_2:+58685934 Msa1257800:CDS
TTCTGGTGGCTATAGTCAGT+TGG 0.542956 8_2:+58686126 Msa1257800:three_prime_UTR
GACAATCTGCGAGTGGAGCT+TGG 0.545668 8_2:+58685920 Msa1257800:CDS
TCCGGCATGGGTCTCCCTGT+CGG 0.546369 8_2:+58681554 Msa1257800:CDS
ATCTAATCTTTATGGAACTG+AGG 0.551442 8_2:+58686168 Msa1257800:three_prime_UTR
GTTTGTTAATCTACCTGCCA+TGG 0.570431 8_2:-58681462 None:intergenic
CATTGCTGATACTGTTGGAA+AGG 0.586857 8_2:+58681766 Msa1257800:CDS
AACGTAGCATCACAAATCTT+AGG 0.588126 8_2:+58681482 Msa1257800:CDS
CAGGGAGACCCATGCCGGAG+CGG 0.594551 8_2:-58681550 None:intergenic
TCAGCAATGCGATCTATACA+AGG 0.598418 8_2:-58681752 None:intergenic
AACACAAAAGTACAAATGAA+CGG 0.601213 8_2:-58686008 None:intergenic
GTTTGGGATTATTGGCTGTG+TGG 0.604221 8_2:+58681939 Msa1257800:CDS
CATGCCGGAGCGGAGGCGGA+GGG 0.607377 8_2:-58681540 None:intergenic
GACTTGCTGAAACCAAGTAC+AGG 0.612858 8_2:+58686054 Msa1257800:three_prime_UTR
GAAGAACTAACATGGGACAA+TGG 0.633770 8_2:+58681713 Msa1257800:CDS
GCATTGGCGTGGCTTTGTGG+AGG 0.638427 8_2:+58681899 Msa1257800:CDS
TCCATATGACAATCTGCGAG+TGG 0.653196 8_2:+58685913 Msa1257800:CDS
GGAGGGATGACGCTACAGAT+CGG 0.657559 8_2:-58681523 None:intergenic
ATTAGTATGAAGCATTGGCG+TGG 0.663186 8_2:+58681888 Msa1257800:intron
AATCTGCGAGTGGAGCTTGG+TGG 0.674769 8_2:+58685923 Msa1257800:CDS
AAGAATCGAAGCAATAACCA+TGG 0.678306 8_2:+58681445 Msa1257800:exon
GGTGAATGAAGAACTAACAT+GGG 0.683523 8_2:+58681706 Msa1257800:CDS
GTAGCATCACAAATCTTAGG+CGG 0.694755 8_2:+58681485 Msa1257800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTCTATTTTACTT+AGG - chr8_2:58682206-58682225 None:intergenic 10.0%
!!! AAATTGTCTTTTTTTTTTTT+AGG + chr8_2:58684163-58684182 Msa1257800:intron 10.0%
!!! AATTTTTATAAATGTTTTCT+AGG + chr8_2:58684810-58684829 Msa1257800:intron 10.0%
!!! ATTTTTATAAATGTTTTCTA+GGG + chr8_2:58684811-58684830 Msa1257800:intron 10.0%
!!! ATTTTTTGATTAATTACTTA+TGG - chr8_2:58685448-58685467 None:intergenic 10.0%
!! ATTAATCAAAAAATTTAACA+TGG + chr8_2:58685454-58685473 Msa1257800:intron 10.0%
!! AATTGAAATGAAAATTGAAT+AGG - chr8_2:58681625-58681644 None:intergenic 15.0%
!!! TTCATTAATAAAACTTTTTG+AGG - chr8_2:58682139-58682158 None:intergenic 15.0%
!!! TTAAATTCAGTGTTATTAAA+TGG - chr8_2:58682518-58682537 None:intergenic 15.0%
!! TATCAATAAAGTGTAAAATA+AGG + chr8_2:58682809-58682828 Msa1257800:intron 15.0%
!!! TTTTTAATTTGTTCACTATT+TGG + chr8_2:58683046-58683065 Msa1257800:intron 15.0%
!! AGAATAAATAAATATGCAAA+TGG - chr8_2:58683526-58683545 None:intergenic 15.0%
!! ATTTATTTATTCTAAGTAGT+AGG + chr8_2:58683533-58683552 Msa1257800:intron 15.0%
!! AAATTCTATTATTGATGTTT+AGG + chr8_2:58684106-58684125 Msa1257800:intron 15.0%
!!! TTTTTAGGATAATTATGTTA+AGG + chr8_2:58684178-58684197 Msa1257800:intron 15.0%
!! TTATTCTATGTTTATGTATT+TGG + chr8_2:58684866-58684885 Msa1257800:intron 15.0%
!! TATTCTATGTTTATGTATTT+GGG + chr8_2:58684867-58684886 Msa1257800:intron 15.0%
!!! ATAATGTTTGCTTTTATATA+CGG + chr8_2:58685497-58685516 Msa1257800:intron 15.0%
!!! TTTTAAGTGTATATTGTTTA+TGG + chr8_2:58685663-58685682 Msa1257800:intron 15.0%
!!! TTTTTATATTATTTTGTGTC+AGG + chr8_2:58685877-58685896 Msa1257800:intron 15.0%
!! AAACAGAAATTGAAAAAAGA+AGG + chr8_2:58681413-58681432 Msa1257800:five_prime_UTR 20.0%
!! AATGAAAATTGAATAGGATA+GGG - chr8_2:58681619-58681638 None:intergenic 20.0%
!! AAATGAAAATTGAATAGGAT+AGG - chr8_2:58681620-58681639 None:intergenic 20.0%
!! AATTTAAATCCATATGGATA+TGG - chr8_2:58681805-58681824 None:intergenic 20.0%
!! ATCCATATGGATTTAAATTT+AGG + chr8_2:58681806-58681825 Msa1257800:intron 20.0%
!! ATCCTAAATTTAAATCCATA+TGG - chr8_2:58681811-58681830 None:intergenic 20.0%
!! ATATTCTATTTAGATCCTAT+GGG + chr8_2:58682051-58682070 Msa1257800:intron 20.0%
!! TATAAAAGTTATCAAAGTCA+TGG + chr8_2:58682237-58682256 Msa1257800:intron 20.0%
!! ATAAAGTGTAAAATAAGGAT+TGG + chr8_2:58682814-58682833 Msa1257800:intron 20.0%
!!! ATTTGTTACTTGATTATTCA+GGG - chr8_2:58683231-58683250 None:intergenic 20.0%
!!! AATTTGTTACTTGATTATTC+AGG - chr8_2:58683232-58683251 None:intergenic 20.0%
!! ACTAATCCTAAAATAAAACA+TGG + chr8_2:58683301-58683320 Msa1257800:intron 20.0%
!!! TATAATTTTGTCTCTTTGAT+GGG + chr8_2:58684221-58684240 Msa1257800:intron 20.0%
!!! AATATATTTTTACAATTCCC+AGG - chr8_2:58684459-58684478 None:intergenic 20.0%
!! TAGATATAATAATCATGCAT+GGG - chr8_2:58685392-58685411 None:intergenic 20.0%
!! TTAGATATAATAATCATGCA+TGG - chr8_2:58685393-58685412 None:intergenic 20.0%
!! GCATGATTATTATATCTAAA+AGG + chr8_2:58685394-58685413 Msa1257800:intron 20.0%
!! AGCATTAATTGCAAAATATT+TGG - chr8_2:58685851-58685870 None:intergenic 20.0%
!! AAAAAGAAATAAACCAGATT+CGG - chr8_2:58686090-58686109 None:intergenic 20.0%
!! CTCAATTTATCTAATCTTTA+TGG + chr8_2:58686160-58686179 Msa1257800:three_prime_UTR 20.0%
!!! ATTTTTCTAGCAATCATATT+TGG - chr8_2:58686255-58686274 None:intergenic 20.0%
! TTGAAATTAGTATGAAGCAT+TGG + chr8_2:58681883-58681902 Msa1257800:intron 25.0%
! CATATTCTATTTAGATCCTA+TGG + chr8_2:58682050-58682069 Msa1257800:intron 25.0%
!!! TTCCTTTTACTTTTGGTATA+TGG - chr8_2:58682279-58682298 None:intergenic 25.0%
!! CATCATTTTCCTTTTACTTT+TGG - chr8_2:58682286-58682305 None:intergenic 25.0%
! CAAAAGTAAAAGGAAAATGA+TGG + chr8_2:58682284-58682303 Msa1257800:intron 25.0%
!! AAATGATGGAGTTAAAAAAG+AGG + chr8_2:58682298-58682317 Msa1257800:intron 25.0%
!! AATGATGGAGTTAAAAAAGA+GGG + chr8_2:58682299-58682318 Msa1257800:intron 25.0%
!! AATTCAGTGTTATTAAATGG+CGG - chr8_2:58682515-58682534 None:intergenic 25.0%
!!! TTAATTTGTTCACTATTTGG+TGG + chr8_2:58683049-58683068 Msa1257800:intron 25.0%
!! TTTGTTACTTGATTATTCAG+GGG - chr8_2:58683230-58683249 None:intergenic 25.0%
!!! GTTTTATTTTAGGATTAGTC+AGG - chr8_2:58683300-58683319 None:intergenic 25.0%
!!! CTTGTTCCATGTTTTATTTT+AGG - chr8_2:58683310-58683329 None:intergenic 25.0%
! AAACAGCAGACATATAAAAT+AGG + chr8_2:58683416-58683435 Msa1257800:intron 25.0%
! ATCTTAATTCTTAACGTAGA+AGG + chr8_2:58683441-58683460 Msa1257800:intron 25.0%
! TTTCATTTCTTGTGTATGAT+AGG - chr8_2:58683477-58683496 None:intergenic 25.0%
!!! ACTGAACATACACTTTTTTT+GGG + chr8_2:58683972-58683991 Msa1257800:intron 25.0%
!!! TTTTTTATTAATTCCCACCA+CGG - chr8_2:58684085-58684104 None:intergenic 25.0%
!! CTATAATTTTGTCTCTTTGA+TGG + chr8_2:58684220-58684239 Msa1257800:intron 25.0%
! CATTAATACATTTCTTACCT+GGG - chr8_2:58684343-58684362 None:intergenic 25.0%
! ATAGTATAGTTGAAACTTGA+AGG + chr8_2:58684555-58684574 Msa1257800:intron 25.0%
! TAGTATAGTTGAAACTTGAA+GGG + chr8_2:58684556-58684575 Msa1257800:intron 25.0%
!! TTTATTCTGATAGGTTTTCT+GGG + chr8_2:58684579-58684598 Msa1257800:intron 25.0%
!!! AATTCAAAACTTGTTTTGCA+GGG - chr8_2:58684664-58684683 None:intergenic 25.0%
!!! TGCAAAACAAGTTTTGAATT+GGG + chr8_2:58684664-58684683 Msa1257800:intron 25.0%
!! TATGTTTATGTATTTGGGTT+TGG + chr8_2:58684872-58684891 Msa1257800:intron 25.0%
!! AGTAACTAAGAAATTTTGTC+AGG - chr8_2:58684999-58685018 None:intergenic 25.0%
!!! CAGGTTTGGTAAATTATTTT+TGG - chr8_2:58685121-58685140 None:intergenic 25.0%
! GTCGATAATATTTAAATGCA+AGG - chr8_2:58685215-58685234 None:intergenic 25.0%
! TTGTCATATGGATAAACTTT+GGG - chr8_2:58685905-58685924 None:intergenic 25.0%
! ATTGTCATATGGATAAACTT+TGG - chr8_2:58685906-58685925 None:intergenic 25.0%
!! AACACAAAAGTACAAATGAA+CGG - chr8_2:58686011-58686030 None:intergenic 25.0%
! AGATAAATTGAGCAGAATAA+TGG - chr8_2:58686152-58686171 None:intergenic 25.0%
!! TGAAAAGTTCTTTTAATGCT+TGG + chr8_2:58686326-58686345 Msa1257800:three_prime_UTR 25.0%
!! GAAAAGTTCTTTTAATGCTT+GGG + chr8_2:58686327-58686346 Msa1257800:three_prime_UTR 25.0%
! TAACCTCAATTTTCGAATTC+TGG + chr8_2:58681664-58681683 Msa1257800:intron 30.0%
! TACTTTTCACCATATCCATA+TGG + chr8_2:58681793-58681812 Msa1257800:intron 30.0%
TTAACTTACAAATGGTGTCT+TGG - chr8_2:58681978-58681997 None:intergenic 30.0%
AGAGCAAGTTAACTTACAAA+TGG - chr8_2:58681986-58682005 None:intergenic 30.0%
TATGACAACACACAACAAAA+TGG - chr8_2:58682034-58682053 None:intergenic 30.0%
TTGTTATCATTCTCTGATAG+TGG + chr8_2:58682093-58682112 Msa1257800:intron 30.0%
TGCCATATACCAAAAGTAAA+AGG + chr8_2:58682274-58682293 Msa1257800:intron 30.0%
TCCATAAGCAAATATGTGAA+GGG - chr8_2:58682450-58682469 None:intergenic 30.0%
!! TATTGGTTGGTTTGAAACAA+AGG + chr8_2:58682689-58682708 Msa1257800:intron 30.0%
TATGATTGAGTGAATGTTTC+TGG + chr8_2:58682769-58682788 Msa1257800:intron 30.0%
! TATTGATATCCCTCGATTTT+AGG - chr8_2:58682797-58682816 None:intergenic 30.0%
ATTGGAAAACTCAGATAGTA+GGG + chr8_2:58682832-58682851 Msa1257800:intron 30.0%
!! TAGAATGGATTGAGGAATAA+GGG + chr8_2:58683117-58683136 Msa1257800:intron 30.0%
AGAAAATCAAATGCATCTCA+AGG + chr8_2:58683355-58683374 Msa1257800:intron 30.0%
AAGTTCTACAGCATAAAATC+AGG - chr8_2:58683599-58683618 None:intergenic 30.0%
TTAACAACCAATGGTTGAAA+TGG - chr8_2:58683666-58683685 None:intergenic 30.0%
!!! CACTGAACATACACTTTTTT+TGG + chr8_2:58683971-58683990 Msa1257800:intron 30.0%
TGAGTAATTACTTCCCAATT+TGG + chr8_2:58684012-58684031 Msa1257800:intron 30.0%
GAGTAATTACTTCCCAATTT+GGG + chr8_2:58684013-58684032 Msa1257800:intron 30.0%
! ATAAAAAGAGTGTAGGTTGT+AGG - chr8_2:58684257-58684276 None:intergenic 30.0%
! TTTGGGTATAAAAAGAGTGT+AGG - chr8_2:58684264-58684283 None:intergenic 30.0%
ATGGTTGTCAAACTTCATTT+GGG - chr8_2:58684281-58684300 None:intergenic 30.0%
!! CACATTGTTATTTGGAATCA+TGG - chr8_2:58684300-58684319 None:intergenic 30.0%
! TTAAGGGACACATTGTTATT+TGG - chr8_2:58684308-58684327 None:intergenic 30.0%
GCATTAATACATTTCTTACC+TGG - chr8_2:58684344-58684363 None:intergenic 30.0%
CAAAACAAAATATCTGCCTT+TGG - chr8_2:58684519-58684538 None:intergenic 30.0%
!!! AGGCAGATATTTTGTTTTGT+CGG + chr8_2:58684520-58684539 Msa1257800:intron 30.0%
! GTTTATTCTGATAGGTTTTC+TGG + chr8_2:58684578-58684597 Msa1257800:intron 30.0%
!!! CAATTCAAAACTTGTTTTGC+AGG - chr8_2:58684665-58684684 None:intergenic 30.0%
!!! CTGCAAAACAAGTTTTGAAT+TGG + chr8_2:58684663-58684682 Msa1257800:intron 30.0%
!!! ACAAGTTTTGAATTGGGATA+AGG + chr8_2:58684670-58684689 Msa1257800:intron 30.0%
AACTACATCATAATTGCCAT+CGG + chr8_2:58684740-58684759 Msa1257800:intron 30.0%
TTCATAATTCGATAGCCATA+TGG - chr8_2:58684843-58684862 None:intergenic 30.0%
! TTATGTATTTGGGTTTGGTT+AGG + chr8_2:58684877-58684896 Msa1257800:intron 30.0%
AAAGAAAATAAACCTGTCAC+AGG + chr8_2:58684931-58684950 Msa1257800:intron 30.0%
! AGAAATTTTGTCAGGTTTTG+TGG - chr8_2:58684991-58685010 None:intergenic 30.0%
ATAATTTACCAAACCTGAAC+TGG + chr8_2:58685124-58685143 Msa1257800:intron 30.0%
TATTATCGACAACTACCATA+TGG + chr8_2:58685225-58685244 Msa1257800:intron 30.0%
GACATCTAAATTTATGTTGC+AGG - chr8_2:58685349-58685368 None:intergenic 30.0%
TATCTAAAAGGTTTGATGCT+TGG + chr8_2:58685406-58685425 Msa1257800:intron 30.0%
AATTTAACATGGACATGTGT+TGG + chr8_2:58685465-58685484 Msa1257800:intron 30.0%
AGAATGAACAACAATTACTG+AGG - chr8_2:58685547-58685566 None:intergenic 30.0%
! CAGTAATTGTTGTTCATTCT+TGG + chr8_2:58685547-58685566 Msa1257800:intron 30.0%
TATCTGAAGGTAAAGATTTG+CGG - chr8_2:58685597-58685616 None:intergenic 30.0%
GTATAAGCATGAGTTCAATT+GGG - chr8_2:58685749-58685768 None:intergenic 30.0%
AGTATAAGCATGAGTTCAAT+TGG - chr8_2:58685750-58685769 None:intergenic 30.0%
GTAAAGCTTCAAAACATGAA+GGG - chr8_2:58685811-58685830 None:intergenic 30.0%
TGTAAAGCTTCAAAACATGA+AGG - chr8_2:58685812-58685831 None:intergenic 30.0%
TTCAAATCCCATTATTGTCT+TGG - chr8_2:58685965-58685984 None:intergenic 30.0%
ATCTAATCTTTATGGAACTG+AGG + chr8_2:58686168-58686187 Msa1257800:three_prime_UTR 30.0%
!! ATCATATTTGGTGGTTTTTC+TGG - chr8_2:58686243-58686262 None:intergenic 30.0%
! TTTCTAGCAATCATATTTGG+TGG - chr8_2:58686252-58686271 None:intergenic 30.0%
ATTTCCAAAACGAAGTCGTT+TGG + chr8_2:58681348-58681367 Msa1257800:five_prime_UTR 35.0%
AAGAATCGAAGCAATAACCA+TGG + chr8_2:58681445-58681464 Msa1257800:exon 35.0%
AACGTAGCATCACAAATCTT+AGG + chr8_2:58681482-58681501 Msa1257800:CDS 35.0%
TCACCAGAATTCGAAAATTG+AGG - chr8_2:58681670-58681689 None:intergenic 35.0%
! CATGTTAGTTCTTCATTCAC+CGG - chr8_2:58681707-58681726 None:intergenic 35.0%
GGTGAATGAAGAACTAACAT+GGG + chr8_2:58681706-58681725 Msa1257800:CDS 35.0%
TCTATACAAGGTTCAGGAAA+TGG - chr8_2:58681743-58681762 None:intergenic 35.0%
!!! CTCTCTCGATTTTTTGGATT+TGG + chr8_2:58682006-58682025 Msa1257800:intron 35.0%
TTATCAAAGTCATGGCCTAA+AGG + chr8_2:58682245-58682264 Msa1257800:intron 35.0%
TATATGGCAATTGTGCCTTT+AGG - chr8_2:58682263-58682282 None:intergenic 35.0%
CCATAAGCAAATATGTGAAG+GGG - chr8_2:58682449-58682468 None:intergenic 35.0%
CTCCATAAGCAAATATGTGA+AGG - chr8_2:58682451-58682470 None:intergenic 35.0%
CTTCACATATTTGCTTATGG+AGG + chr8_2:58682449-58682468 Msa1257800:intron 35.0%
TTAACAGAGACATGTGTGAT+TGG + chr8_2:58682534-58682553 Msa1257800:intron 35.0%
ATGTGTGATTGGAGGTTTAT+GGG + chr8_2:58682545-58682564 Msa1257800:intron 35.0%
AGTAGTGTTCCACAAGTAAT+AGG + chr8_2:58682581-58682600 Msa1257800:intron 35.0%
AATGAATGAACAGAGACCTT+TGG + chr8_2:58682621-58682640 Msa1257800:intron 35.0%
ATGAGTAGTTGGTTATTGGT+TGG + chr8_2:58682676-58682695 Msa1257800:intron 35.0%
ACAAAGGATGAGTGAATGAT+TGG + chr8_2:58682727-58682746 Msa1257800:intron 35.0%
CAAAGGATGAGTGAATGATT+GGG + chr8_2:58682728-58682747 Msa1257800:intron 35.0%
GATTGGAAAACTCAGATAGT+AGG + chr8_2:58682831-58682850 Msa1257800:intron 35.0%
TTGGAAAACTCAGATAGTAG+GGG + chr8_2:58682833-58682852 Msa1257800:intron 35.0%
! CGAGATAACAGACTAGTTAA+TGG - chr8_2:58682974-58682993 None:intergenic 35.0%
! TAACTAGTCTGTTATCTCGT+AGG + chr8_2:58682975-58682994 Msa1257800:intron 35.0%
!! ATGATTGTTGTTTCGAGTGA+GGG + chr8_2:58683088-58683107 Msa1257800:intron 35.0%
!! GTAGAATGGATTGAGGAATA+AGG + chr8_2:58683116-58683135 Msa1257800:intron 35.0%
GAAAGCGAGCTATTAAGATA+AGG + chr8_2:58683164-58683183 Msa1257800:intron 35.0%
! CTCAAGGTTTTCAAATTCCT+AGG + chr8_2:58683371-58683390 Msa1257800:intron 35.0%
! CAAATTCCTAGGTTTTACCT+AGG + chr8_2:58683382-58683401 Msa1257800:intron 35.0%
TCAACTACCATTTCAACCAT+TGG + chr8_2:58683656-58683675 Msa1257800:intron 35.0%
ATCACAGTCTTAACAACCAA+TGG - chr8_2:58683675-58683694 None:intergenic 35.0%
! AATTTTTATGCCGTTCCCAA+TGG - chr8_2:58683739-58683758 None:intergenic 35.0%
AACGGCATAAAAATTGTGAG+AGG + chr8_2:58683744-58683763 Msa1257800:intron 35.0%
TGTAAATGTGCATGTTGTTG+CGG - chr8_2:58683891-58683910 None:intergenic 35.0%
!!! ACACTTTTTTTGGGACAATG+TGG + chr8_2:58683981-58684000 Msa1257800:intron 35.0%
!!! CACTTTTTTTGGGACAATGT+GGG + chr8_2:58683982-58684001 Msa1257800:intron 35.0%
AGATGAGAAGTTCCCAAATT+GGG - chr8_2:58684028-58684047 None:intergenic 35.0%
TAGATGAGAAGTTCCCAAAT+TGG - chr8_2:58684029-58684048 None:intergenic 35.0%
CATGGTTGTCAAACTTCATT+TGG - chr8_2:58684282-58684301 None:intergenic 35.0%
CTTGAAGGGTTTATTCTGAT+AGG + chr8_2:58684570-58684589 Msa1257800:intron 35.0%
CACATCTTCAATGTGAAGTA+CGG - chr8_2:58684768-58684787 None:intergenic 35.0%
CTTCACATTGAAGATGTGAT+TGG + chr8_2:58684770-58684789 Msa1257800:intron 35.0%
! TTTCTAGGGAATAAGCCATA+TGG + chr8_2:58684825-58684844 Msa1257800:intron 35.0%
!! AGCATTGACTTTAAGAGTCA+GGG + chr8_2:58684955-58684974 Msa1257800:intron 35.0%
!! TTGTCAGGTTTTGTGGATTT+CGG - chr8_2:58684984-58685003 None:intergenic 35.0%
!!! AATTATTTTTGGCAGCCTGA+AGG - chr8_2:58685110-58685129 None:intergenic 35.0%
TTGCAATGAACACTACCATA+TGG - chr8_2:58685243-58685262 None:intergenic 35.0%
TGTTCAATTCAGTAACAAGC+TGG + chr8_2:58685266-58685285 Msa1257800:intron 35.0%
! TGCTTTTATATACGGTGTGT+TGG + chr8_2:58685505-58685524 Msa1257800:intron 35.0%
CAACCATTGTATGGCAATAT+CGG + chr8_2:58685640-58685659 Msa1257800:intron 35.0%
AAACCGATATTGCCATACAA+TGG - chr8_2:58685646-58685665 None:intergenic 35.0%
ATGAGTTCAATTGGGAATCA+TGG - chr8_2:58685741-58685760 None:intergenic 35.0%
TATTGTCTTGGATCTACCTA+TGG - chr8_2:58685953-58685972 None:intergenic 35.0%
AGGTAGATCCAAGACAATAA+TGG + chr8_2:58685954-58685973 Msa1257800:exon 35.0%
GGTAGATCCAAGACAATAAT+GGG + chr8_2:58685955-58685974 Msa1257800:exon 35.0%
TTTCATCATTCTCATGCTTC+TGG + chr8_2:58686109-58686128 Msa1257800:three_prime_UTR 35.0%
TGTTACTGCAATGCAATCAC+AGG - chr8_2:58681374-58681393 None:intergenic 40.0%
! GTTTGTTAATCTACCTGCCA+TGG - chr8_2:58681465-58681484 None:intergenic 40.0%
GTAGCATCACAAATCTTAGG+CGG + chr8_2:58681485-58681504 Msa1257800:CDS 40.0%
!! AGAAACGAACGGGTTTGTTA+GGG - chr8_2:58681592-58681611 None:intergenic 40.0%
ATAGGGTAAGAGAAACGAAC+GGG - chr8_2:58681602-58681621 None:intergenic 40.0%
GATAGGGTAAGAGAAACGAA+CGG - chr8_2:58681603-58681622 None:intergenic 40.0%
!!! GGTGATGTTTTTTCAGCTTC+CGG + chr8_2:58681685-58681704 Msa1257800:intron 40.0%
CGGTGAATGAAGAACTAACA+TGG + chr8_2:58681705-58681724 Msa1257800:CDS 40.0%
GAAGAACTAACATGGGACAA+TGG + chr8_2:58681713-58681732 Msa1257800:CDS 40.0%
ATGCGATCTATACAAGGTTC+AGG - chr8_2:58681749-58681768 None:intergenic 40.0%
TCAGCAATGCGATCTATACA+AGG - chr8_2:58681755-58681774 None:intergenic 40.0%
CATTGCTGATACTGTTGGAA+AGG + chr8_2:58681766-58681785 Msa1257800:CDS 40.0%
!! ATTAGTATGAAGCATTGGCG+TGG + chr8_2:58681888-58681907 Msa1257800:intron 40.0%
!! TTTTGCGGGTTTGGGATTAT+TGG + chr8_2:58681931-58681950 Msa1257800:CDS 40.0%
!!! TGCTCTCTCTCTCGATTTTT+TGG + chr8_2:58682000-58682019 Msa1257800:intron 40.0%
!! TCATTCTCTGATAGTGGCAT+TGG + chr8_2:58682099-58682118 Msa1257800:intron 40.0%
!! CATTCTGGCGTTGACAATAT+TGG - chr8_2:58682369-58682388 None:intergenic 40.0%
! ATGGCAGGTTTTTGACATTC+TGG - chr8_2:58682384-58682403 None:intergenic 40.0%
CAATAGCATGCTTATATGGC+AGG - chr8_2:58682399-58682418 None:intergenic 40.0%
GCCATATAAGCATGCTATTG+CGG + chr8_2:58682399-58682418 Msa1257800:intron 40.0%
CCCCTTCACATATTTGCTTA+TGG + chr8_2:58682446-58682465 Msa1257800:intron 40.0%
CATGTGTGATTGGAGGTTTA+TGG + chr8_2:58682544-58682563 Msa1257800:intron 40.0%
TTCAGCACACCTATTACTTG+TGG - chr8_2:58682593-58682612 None:intergenic 40.0%
AGTAATAGGTGTGCTGAAAC+AGG + chr8_2:58682595-58682614 Msa1257800:intron 40.0%
GTAATAGGTGTGCTGAAACA+GGG + chr8_2:58682596-58682615 Msa1257800:intron 40.0%
TAATAGGTGTGCTGAAACAG+GGG + chr8_2:58682597-58682616 Msa1257800:intron 40.0%
GCTGATGAGTAGTTGGTTAT+TGG + chr8_2:58682672-58682691 Msa1257800:intron 40.0%
! TTTCTGGTGCCTAAAATCGA+GGG + chr8_2:58682785-58682804 Msa1257800:intron 40.0%
!! AGCACTATAGTGGATTCCAT+GGG + chr8_2:58682946-58682965 Msa1257800:intron 40.0%
TAGTCTGTTATCTCGTAGGT+GGG + chr8_2:58682979-58682998 Msa1257800:intron 40.0%
!! CATGATTGTTGTTTCGAGTG+AGG + chr8_2:58683087-58683106 Msa1257800:intron 40.0%
!! GGAAAAGGTAGAATGGATTG+AGG + chr8_2:58683109-58683128 Msa1257800:intron 40.0%
TGGATTGAGGAATAAGGGTT+TGG + chr8_2:58683122-58683141 Msa1257800:intron 40.0%
GGATTGAGGAATAAGGGTTT+GGG + chr8_2:58683123-58683142 Msa1257800:intron 40.0%
GATTGAGGAATAAGGGTTTG+GGG + chr8_2:58683124-58683143 Msa1257800:intron 40.0%
ATTGAGGAATAAGGGTTTGG+GGG + chr8_2:58683125-58683144 Msa1257800:intron 40.0%
!! TAAAATCAGGTGCCATTGTG+AGG - chr8_2:58683586-58683605 None:intergenic 40.0%
GCATAAAAATTGTGAGAGGC+CGG + chr8_2:58683748-58683767 Msa1257800:intron 40.0%
GTAAATGTGCATGTTGTTGC+GGG - chr8_2:58683890-58683909 None:intergenic 40.0%
CAACATGCACATTTACAACC+CGG + chr8_2:58683894-58683913 Msa1257800:intron 40.0%
AATCAAAAACGTGTGGAACC+GGG - chr8_2:58683915-58683934 None:intergenic 40.0%
GAATCAAAAACGTGTGGAAC+CGG - chr8_2:58683916-58683935 None:intergenic 40.0%
!! GGTTCCACACGTTTTTGATT+CGG + chr8_2:58683915-58683934 Msa1257800:intron 40.0%
ACTTCCGAATCAAAAACGTG+TGG - chr8_2:58683922-58683941 None:intergenic 40.0%
!!! TTTTGATTCGGAAGTTGACC+CGG + chr8_2:58683927-58683946 Msa1257800:intron 40.0%
TCTTTGCAGATATCATTCCG+TGG + chr8_2:58684065-58684084 Msa1257800:intron 40.0%
AATACATTTCTTACCTGGGC+TGG - chr8_2:58684339-58684358 None:intergenic 40.0%
! TTGCAATTCTCTGGCTTACA+GGG - chr8_2:58684386-58684405 None:intergenic 40.0%
! AGATTGTAGAGCTGCTACTT+AGG - chr8_2:58684427-58684446 None:intergenic 40.0%
TAAGTAGCAGCTCTACAATC+TGG + chr8_2:58684426-58684445 Msa1257800:intron 40.0%
TACAATCTGGACATTGACCT+GGG + chr8_2:58684439-58684458 Msa1257800:intron 40.0%
TTGCAATACGTAGCAACCAA+AGG + chr8_2:58684500-58684519 Msa1257800:intron 40.0%
GGGATAAGGATCATTCAAGA+TGG + chr8_2:58684684-58684703 Msa1257800:intron 40.0%
!! CAGCATTGACTTTAAGAGTC+AGG + chr8_2:58684954-58684973 Msa1257800:intron 40.0%
!! GTTGGTTTGAATCAGGTTGA+TGG - chr8_2:58685086-58685105 None:intergenic 40.0%
!! TGAAGGAGTTGGTTTGAATC+AGG - chr8_2:58685093-58685112 None:intergenic 40.0%
TGATTCAAACCAACTCCTTC+AGG + chr8_2:58685092-58685111 Msa1257800:intron 40.0%
ACAATCAGCAGCTATGTTTC+AGG - chr8_2:58685295-58685314 None:intergenic 40.0%
TGATTGTATCCAACTTTCCC+TGG + chr8_2:58685308-58685327 Msa1257800:intron 40.0%
GTAATTCTACCAGGGAAAGT+TGG - chr8_2:58685320-58685339 None:intergenic 40.0%
GGTCAGTTGTAATTCTACCA+GGG - chr8_2:58685328-58685347 None:intergenic 40.0%
AGGTCAGTTGTAATTCTACC+AGG - chr8_2:58685329-58685348 None:intergenic 40.0%
! TATACGGTGTGTTGGCAATT+TGG + chr8_2:58685513-58685532 Msa1257800:intron 40.0%
ACTCGACTAGGATTATCTGA+AGG - chr8_2:58685610-58685629 None:intergenic 40.0%
AGATAATCCTAGTCGAGTTC+TGG + chr8_2:58685612-58685631 Msa1257800:intron 40.0%
CTGGTTTCTCAACCATTGTA+TGG + chr8_2:58685631-58685650 Msa1257800:intron 40.0%
AGGTTATATGGACCATGACA+AGG - chr8_2:58685718-58685737 None:intergenic 40.0%
TGGGAATCATGGAGGTTATA+TGG - chr8_2:58685730-58685749 None:intergenic 40.0%
AGTTCAATTGGGAATCATGG+AGG - chr8_2:58685738-58685757 None:intergenic 40.0%
ATCGAAGCAATAACCATGGC+AGG + chr8_2:58681449-58681468 Msa1257800:exon 45.0%
! GAGAAACGAACGGGTTTGTT+AGG - chr8_2:58681593-58681612 None:intergenic 45.0%
GATCGCATTGCTGATACTGT+TGG + chr8_2:58681761-58681780 Msa1257800:CDS 45.0%
!! TGGAGGATTGAGCTGTTTTG+CGG + chr8_2:58681916-58681935 Msa1257800:CDS 45.0%
!! ATTGAGCTGTTTTGCGGGTT+TGG + chr8_2:58681922-58681941 Msa1257800:CDS 45.0%
!! TTGAGCTGTTTTGCGGGTTT+GGG + chr8_2:58681923-58681942 Msa1257800:CDS 45.0%
! GTTTGGGATTATTGGCTGTG+TGG + chr8_2:58681939-58681958 Msa1257800:CDS 45.0%
TCCTATGGGTGCATTGTCTA+TGG + chr8_2:58682065-58682084 Msa1257800:intron 45.0%
ACCATAGACAATGCACCCAT+AGG - chr8_2:58682069-58682088 None:intergenic 45.0%
GCCGCAATAGCATGCTTATA+TGG - chr8_2:58682403-58682422 None:intergenic 45.0%
ATGGAGGAATGTCATGGTGA+TGG - chr8_2:58682490-58682509 None:intergenic 45.0%
ATCACCATGACATTCCTCCA+TGG + chr8_2:58682489-58682508 Msa1257800:intron 45.0%
TTATTAAATGGCGGCCATGG+AGG - chr8_2:58682506-58682525 None:intergenic 45.0%
! GTGTTATTAAATGGCGGCCA+TGG - chr8_2:58682509-58682528 None:intergenic 45.0%
ACAGAGACATGTGTGATTGG+AGG + chr8_2:58682537-58682556 Msa1257800:intron 45.0%
AATAGGTGTGCTGAAACAGG+GGG + chr8_2:58682598-58682617 Msa1257800:intron 45.0%
GAATGAACAGAGACCTTTGG+TGG + chr8_2:58682624-58682643 Msa1257800:intron 45.0%
! CAAGCAGTGTTTTCCACCAA+AGG - chr8_2:58682640-58682659 None:intergenic 45.0%
CTTTGGTGGAAAACACTGCT+TGG + chr8_2:58682638-58682657 Msa1257800:intron 45.0%
AAGCGATGCTGATGAGTAGT+TGG + chr8_2:58682665-58682684 Msa1257800:intron 45.0%
!! GTTTCTGGTGCCTAAAATCG+AGG + chr8_2:58682784-58682803 Msa1257800:intron 45.0%
! AATTTTGCGCTACAACGCGA+TGG + chr8_2:58682882-58682901 Msa1257800:intron 45.0%
TTTCCACTCCAGCACTATAG+TGG + chr8_2:58682936-58682955 Msa1257800:intron 45.0%
! AATCCACTATAGTGCTGGAG+TGG - chr8_2:58682942-58682961 None:intergenic 45.0%
CATGGAATCCACTATAGTGC+TGG - chr8_2:58682947-58682966 None:intergenic 45.0%
!! CAGCACTATAGTGGATTCCA+TGG + chr8_2:58682945-58682964 Msa1257800:intron 45.0%
! AGACTAGTTAATGGCACCCA+TGG - chr8_2:58682965-58682984 None:intergenic 45.0%
CTAGTCTGTTATCTCGTAGG+TGG + chr8_2:58682978-58682997 Msa1257800:intron 45.0%
AGTCTGTTATCTCGTAGGTG+GGG + chr8_2:58682980-58682999 Msa1257800:intron 45.0%
! GTTGTTTCGAGTGAGGGAAA+AGG + chr8_2:58683094-58683113 Msa1257800:intron 45.0%
GAGTGAGGGAAAAGGTAGAA+TGG + chr8_2:58683102-58683121 Msa1257800:intron 45.0%
GTCAGTCCTAGGTAAAACCT+AGG - chr8_2:58683391-58683410 None:intergenic 45.0%
! AGGTTTTACCTAGGACTGAC+TGG + chr8_2:58683391-58683410 Msa1257800:intron 45.0%
!! CTGTTTTTCCAGTCAGTCCT+AGG - chr8_2:58683402-58683421 None:intergenic 45.0%
GTCGTAATCATGCCTCACAA+TGG + chr8_2:58683571-58683590 Msa1257800:intron 45.0%
! ACGTGTTTTTCTCCCTCCAT+TGG + chr8_2:58683720-58683739 Msa1257800:intron 45.0%
! CGTGTTTTTCTCCCTCCATT+GGG + chr8_2:58683721-58683740 Msa1257800:intron 45.0%
! TTTTCTCCCTCCATTGGGAA+CGG + chr8_2:58683726-58683745 Msa1257800:intron 45.0%
TTTATGCCGTTCCCAATGGA+GGG - chr8_2:58683735-58683754 None:intergenic 45.0%
! TTTTATGCCGTTCCCAATGG+AGG - chr8_2:58683736-58683755 None:intergenic 45.0%
!! AGAAGAAGATGGTGGAATCG+AGG + chr8_2:58683785-58683804 Msa1257800:intron 45.0%
!! GAAGAAGATGGTGGAATCGA+GGG + chr8_2:58683786-58683805 Msa1257800:intron 45.0%
TCCCTCTTTGCAATGAGAAC+CGG - chr8_2:58683949-58683968 None:intergenic 45.0%
TTGCAGATATCATTCCGTGG+TGG + chr8_2:58684068-58684087 Msa1257800:intron 45.0%
TGCAGATATCATTCCGTGGT+GGG + chr8_2:58684069-58684088 Msa1257800:intron 45.0%
! GTTGCAATTCTCTGGCTTAC+AGG - chr8_2:58684387-58684406 None:intergenic 45.0%
GACTGGATGTTGCAATTCTC+TGG - chr8_2:58684395-58684414 None:intergenic 45.0%
CTACAATCTGGACATTGACC+TGG + chr8_2:58684438-58684457 Msa1257800:intron 45.0%
! TAGGTTTTCTGGGTTTCAGC+TGG + chr8_2:58684589-58684608 Msa1257800:intron 45.0%
! AGGTTTTCTGGGTTTCAGCT+GGG + chr8_2:58684590-58684609 Msa1257800:intron 45.0%
CCTAGCTGATGCACAAAATC+TGG - chr8_2:58684622-58684641 None:intergenic 45.0%
! CCAGATTTTGTGCATCAGCT+AGG + chr8_2:58684619-58684638 Msa1257800:intron 45.0%
TGTGCATCAGCTAGGATTGT+TGG + chr8_2:58684627-58684646 Msa1257800:intron 45.0%
GTGCATCAGCTAGGATTGTT+GGG + chr8_2:58684628-58684647 Msa1257800:intron 45.0%
AATGTGAAGTACGGATCCGA+TGG - chr8_2:58684759-58684778 None:intergenic 45.0%
! TCTTTTCGACCAAAGCGAGA+AGG - chr8_2:58684916-58684935 None:intergenic 45.0%
GCTATCATTCAATCGAGCCA+GGG - chr8_2:58685171-58685190 None:intergenic 45.0%
TGCTATCATTCAATCGAGCC+AGG - chr8_2:58685172-58685191 None:intergenic 45.0%
TGAGAAACCAGAACTCGACT+AGG - chr8_2:58685622-58685641 None:intergenic 45.0%
TGCTCCTTGTATCCTTGTCA+TGG + chr8_2:58685703-58685722 Msa1257800:intron 45.0%
TGGACCATGACAAGGATACA+AGG - chr8_2:58685710-58685729 None:intergenic 45.0%
TCCATATGACAATCTGCGAG+TGG + chr8_2:58685913-58685932 Msa1257800:CDS 45.0%
TCCACTCGCAGATTGTCATA+TGG - chr8_2:58685917-58685936 None:intergenic 45.0%
!! GACTTGCTGAAACCAAGTAC+AGG + chr8_2:58686054-58686073 Msa1257800:three_prime_UTR 45.0%
CATCATTCTCATGCTTCTGG+TGG + chr8_2:58686112-58686131 Msa1257800:three_prime_UTR 45.0%
TTCTGGTGGCTATAGTCAGT+TGG + chr8_2:58686126-58686145 Msa1257800:three_prime_UTR 45.0%
! CAGGCCAAACGACTTCGTTT+TGG - chr8_2:58681355-58681374 None:intergenic 50.0%
! GGACGTAGTGTTTTCCGACA+GGG - chr8_2:58681571-58681590 None:intergenic 50.0%
!! GGAGGATTGAGCTGTTTTGC+GGG + chr8_2:58681917-58681936 Msa1257800:CDS 50.0%
!! GAGGAATGTCATGGTGATGG+TGG - chr8_2:58682487-58682506 None:intergenic 50.0%
GTCAGCTCAGCTTAGCACAA+AGG + chr8_2:58682711-58682730 Msa1257800:intron 50.0%
ACGCGATGGACACCTTACAT+TGG + chr8_2:58682896-58682915 Msa1257800:intron 50.0%
! TGGACACCTTACATTGGCCT+TGG + chr8_2:58682902-58682921 Msa1257800:intron 50.0%
!! GGACACCTTACATTGGCCTT+GGG + chr8_2:58682903-58682922 Msa1257800:intron 50.0%
!! ACCTTACATTGGCCTTGGGT+AGG + chr8_2:58682907-58682926 Msa1257800:intron 50.0%
ATAAGGGTTTGGGGGAGTGA+AGG + chr8_2:58683133-58683152 Msa1257800:intron 50.0%
AGCAATGCTTTCTCTCGTGC+TGG + chr8_2:58683809-58683828 Msa1257800:intron 50.0%
TCTCTCCCCGATTTCTCATG+TGG + chr8_2:58683842-58683861 Msa1257800:intron 50.0%
GGTCACCACATGAGAAATCG+GGG - chr8_2:58683850-58683869 None:intergenic 50.0%
GGGTCACCACATGAGAAATC+GGG - chr8_2:58683851-58683870 None:intergenic 50.0%
CGGGTCACCACATGAGAAAT+CGG - chr8_2:58683852-58683871 None:intergenic 50.0%
CGGGTCAAAACTGTTCACTC+GGG - chr8_2:58683871-58683890 None:intergenic 50.0%
GCGGGTCAAAACTGTTCACT+CGG - chr8_2:58683872-58683891 None:intergenic 50.0%
ACCCGGTTCTCATTGCAAAG+AGG + chr8_2:58683944-58683963 Msa1257800:intron 50.0%
CCCTCTTTGCAATGAGAACC+GGG - chr8_2:58683948-58683967 None:intergenic 50.0%
CCCGGTTCTCATTGCAAAGA+GGG + chr8_2:58683945-58683964 Msa1257800:intron 50.0%
!! TGGGCTGGTGGATGCTTTAA+GGG - chr8_2:58684324-58684343 None:intergenic 50.0%
! ACATTTCTTACCTGGGCTGG+TGG - chr8_2:58684336-58684355 None:intergenic 50.0%
! AGAGCTGCTACTTAGGTGCT+GGG - chr8_2:58684420-58684439 None:intergenic 50.0%
! TAGAGCTGCTACTTAGGTGC+TGG - chr8_2:58684421-58684440 None:intergenic 50.0%
! GGTTTGGTTAGGTCTGCTCT+AGG + chr8_2:58684888-58684907 Msa1257800:intron 50.0%
AAGTCAATGCTGCCTGTGAC+AGG - chr8_2:58684946-58684965 None:intergenic 50.0%
! TTTTGGCAGCCTGAAGGAGT+TGG - chr8_2:58685104-58685123 None:intergenic 50.0%
GGATTTAACGTAGCTGGGTC+AGG - chr8_2:58685150-58685169 None:intergenic 50.0%
ACCCAGCTACGTTAAATCCC+TGG + chr8_2:58685151-58685170 Msa1257800:intron 50.0%
GCCAGGGATTTAACGTAGCT+GGG - chr8_2:58685155-58685174 None:intergenic 50.0%
AGCCAGGGATTTAACGTAGC+TGG - chr8_2:58685156-58685175 None:intergenic 50.0%
AGATTTGCGGCATGATCGAC+TGG - chr8_2:58685584-58685603 None:intergenic 50.0%
GGCTCTTCGATTCCTGTACT+TGG - chr8_2:58686069-58686088 None:intergenic 50.0%
AGGAATCGAAGAGCCGAATC+TGG + chr8_2:58686074-58686093 Msa1257800:three_prime_UTR 50.0%
GGAGGGATGACGCTACAGAT+CGG - chr8_2:58681526-58681545 None:intergenic 55.0%
! GGGACGTAGTGTTTTCCGAC+AGG - chr8_2:58681572-58681591 None:intergenic 55.0%
!! GAAGCATTGGCGTGGCTTTG+TGG + chr8_2:58681896-58681915 Msa1257800:CDS 55.0%
AAGCATGCTATTGCGGCCGT+TGG + chr8_2:58682406-58682425 Msa1257800:intron 55.0%
GCCTACCCAAGGCCAATGTA+AGG - chr8_2:58682911-58682930 None:intergenic 55.0%
!! TACATTGGCCTTGGGTAGGC+TGG + chr8_2:58682911-58682930 Msa1257800:intron 55.0%
!! ACATTGGCCTTGGGTAGGCT+GGG + chr8_2:58682912-58682931 Msa1257800:intron 55.0%
AGTGAGCGCGCAGAAGAAGA+TGG + chr8_2:58683774-58683793 Msa1257800:intron 55.0%
!! CTGGGCTGGTGGATGCTTTA+AGG - chr8_2:58684325-58684344 None:intergenic 55.0%
! CTTAAAGCATCCACCAGCCC+AGG + chr8_2:58684323-58684342 Msa1257800:intron 55.0%
! ATGCAGCACTGAGAAGCGCA+AGG + chr8_2:58684360-58684379 Msa1257800:intron 55.0%
!! TACTTAGGTGCTGGGAGGAC+TGG - chr8_2:58684412-58684431 None:intergenic 55.0%
CTCTAGGCACCTTCTCGCTT+TGG + chr8_2:58684904-58684923 Msa1257800:intron 55.0%
TTGCGGCATGATCGACTGGA+TGG - chr8_2:58685580-58685599 None:intergenic 55.0%
GACAATCTGCGAGTGGAGCT+TGG + chr8_2:58685920-58685939 Msa1257800:CDS 55.0%
AATCTGCGAGTGGAGCTTGG+TGG + chr8_2:58685923-58685942 Msa1257800:CDS 55.0%
!! GGAGCTTGGTGGTGAACCAT+AGG + chr8_2:58685934-58685953 Msa1257800:CDS 55.0%
!! GCATTGGCGTGGCTTTGTGG+AGG + chr8_2:58681899-58681918 Msa1257800:CDS 60.0%
GGCCGTTGGCACCATCATGA+CGG + chr8_2:58682420-58682439 Msa1257800:intron 60.0%
GCCGTTGGCACCATCATGAC+GGG + chr8_2:58682421-58682440 Msa1257800:intron 60.0%
! GCCCGTCATGATGGTGCCAA+CGG - chr8_2:58682425-58682444 None:intergenic 60.0%
!! TGAAGGGGTGCCCGTCATGA+TGG - chr8_2:58682434-58682453 None:intergenic 60.0%
GCGGCCATGGAGGAATGTCA+TGG - chr8_2:58682496-58682515 None:intergenic 60.0%
!! CATTGGCCTTGGGTAGGCTG+GGG + chr8_2:58682913-58682932 Msa1257800:intron 60.0%
TGGAAACCCCAGCCTACCCA+AGG - chr8_2:58682922-58682941 None:intergenic 60.0%
GAGCGCGCAGAAGAAGATGG+TGG + chr8_2:58683777-58683796 Msa1257800:intron 60.0%
!! GCTGCTACTTAGGTGCTGGG+AGG - chr8_2:58684417-58684436 None:intergenic 60.0%
! GGGTCAGGCCAGTTCAGGTT+TGG - chr8_2:58685135-58685154 None:intergenic 60.0%
TAGCTGGGTCAGGCCAGTTC+AGG - chr8_2:58685140-58685159 None:intergenic 60.0%
TCCGGCATGGGTCTCCCTGT+CGG + chr8_2:58681554-58681573 Msa1257800:CDS 65.0%
TCCGACAGGGAGACCCATGC+CGG - chr8_2:58681558-58681577 None:intergenic 65.0%
CTTCTGCGCGCTCACTGCTC+CGG - chr8_2:58683770-58683789 None:intergenic 65.0%
TCATCCCTCCGCCTCCGCTC+CGG + chr8_2:58681536-58681555 Msa1257800:CDS 70.0%
CAGGGAGACCCATGCCGGAG+CGG - chr8_2:58681553-58681572 None:intergenic 70.0%
CATGCCGGAGCGGAGGCGGA+GGG - chr8_2:58681543-58681562 None:intergenic 75.0%
CTCCGCCTCCGCTCCGGCAT+GGG + chr8_2:58681542-58681561 Msa1257800:CDS 75.0%
GACCCATGCCGGAGCGGAGG+CGG - chr8_2:58681547-58681566 None:intergenic 75.0%
GGAGACCCATGCCGGAGCGG+AGG - chr8_2:58681550-58681569 None:intergenic 75.0%
! CCATGCCGGAGCGGAGGCGG+AGG - chr8_2:58681544-58681563 None:intergenic 80.0%
! CCTCCGCCTCCGCTCCGGCA+TGG + chr8_2:58681541-58681560 Msa1257800:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 58681345 58686399 58681345 ID=Msa1257800;Name=Msa1257800
chr8_2 mRNA 58681345 58686399 58681345 ID=Msa1257800-mRNA-1;Parent=Msa1257800;Name=Msa1257800-mRNA-1;_AED=0.09;_eAED=0.09;_QI=119|1|1|1|0.66|0.75|4|444|125
chr8_2 exon 58681345 58681601 58681345 ID=Msa1257800-mRNA-1:exon:18160;Parent=Msa1257800-mRNA-1
chr8_2 exon 58681701 58681787 58681701 ID=Msa1257800-mRNA-1:exon:18161;Parent=Msa1257800-mRNA-1
chr8_2 exon 58681893 58681988 58681893 ID=Msa1257800-mRNA-1:exon:18162;Parent=Msa1257800-mRNA-1
chr8_2 exon 58685899 58686399 58685899 ID=Msa1257800-mRNA-1:exon:18163;Parent=Msa1257800-mRNA-1
chr8_2 five_prime_UTR 58681345 58681463 58681345 ID=Msa1257800-mRNA-1:five_prime_utr;Parent=Msa1257800-mRNA-1
chr8_2 CDS 58681464 58681601 58681464 ID=Msa1257800-mRNA-1:cds;Parent=Msa1257800-mRNA-1
chr8_2 CDS 58681701 58681787 58681701 ID=Msa1257800-mRNA-1:cds;Parent=Msa1257800-mRNA-1
chr8_2 CDS 58681893 58681988 58681893 ID=Msa1257800-mRNA-1:cds;Parent=Msa1257800-mRNA-1
chr8_2 CDS 58685899 58685955 58685899 ID=Msa1257800-mRNA-1:cds;Parent=Msa1257800-mRNA-1
chr8_2 three_prime_UTR 58685956 58686399 58685956 ID=Msa1257800-mRNA-1:three_prime_utr;Parent=Msa1257800-mRNA-1
Gene Sequence

>Msa1257800

ATGGCAGGTAGATTAACAAACGTAGCATCACAAATCTTAGGCGGAAACAGCGTCGTTCACCGATCTGTAGCGTCATCCCTCCGCCTCCGCTCCGGCATGGGTCTCCCTGTCGGAAAACACTACGTCCCTAACAAACCCCTTCCGGTGAATGAAGAACTAACATGGGACAATGGTACTCCATTTCCTGAACCTTGTATAGATCGCATTGCTGATACTGTTGGAAAGTATGAAGCATTGGCGTGGCTTTGTGGAGGATTGAGCTGTTTTGCGGGTTTGGGATTATTGGCTGTGTGGAATGATAAAGCTTCCAAGACACCATTTGCACCCAAAGTTTATCCATATGACAATCTGCGAGTGGAGCTTGGTGGTGAACCATAG

Protein sequence

>Msa1257800

MAGRLTNVASQILGGNSVVHRSVASSLRLRSGMGLPVGKHYVPNKPLPVNEELTWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLSCFAGLGLLAVWNDKASKTPFAPKVYPYDNLRVELGGEP*