Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276040 | XP_039684558.1 | 61.039 | 77 | 29 | 1 | 1 | 76 | 150 | 226 | 1.26e-17 | 90.5 |
| Msa1276040 | XP_039684558.1 | 74.211 | 190 | 48 | 1 | 73 | 262 | 1 | 189 | 7.59e-92 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276040 | A0A396GDW0 | 61.039 | 77 | 29 | 1 | 1 | 76 | 150 | 226 | 6.03e-18 | 90.5 |
| Msa1276040 | A0A396GDW0 | 74.211 | 190 | 48 | 1 | 73 | 262 | 1 | 189 | 3.63e-92 | 281 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657970 | Msa1276040 | 0.804281 | 2.329295e-49 | -8.615850e-47 |
| Msa0157810 | Msa1276040 | 0.809405 | 1.923406e-50 | -8.615850e-47 |
| Msa0231000 | Msa1276040 | 0.800561 | 1.360448e-48 | -8.615850e-47 |
| Msa1276040 | Msa1314280 | 0.802214 | 6.237697e-49 | -8.615850e-47 |
| Msa1276040 | Msa1423990 | 0.809982 | 1.445220e-50 | -8.615850e-47 |
| Msa0458700 | Msa1276040 | 0.805926 | 1.054519e-49 | -8.615850e-47 |
| Msa0885280 | Msa1276040 | 0.807094 | 5.978357e-50 | -8.615850e-47 |
| Msa0957860 | Msa1276040 | 0.810511 | 1.111782e-50 | -8.615850e-47 |
| Msa0957960 | Msa1276040 | 0.810767 | 9.785658e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276040 | MtrunA17_Chr8g0343301 | 74.211 | 190 | 48 | 1 | 73 | 262 | 1 | 189 | 6.99e-96 | 281 |
| Msa1276040 | MtrunA17_Chr8g0343301 | 61.039 | 77 | 29 | 1 | 1 | 76 | 150 | 226 | 1.16e-21 | 90.5 |
| Msa1276040 | MtrunA17_Chr8g0343351 | 93.750 | 144 | 9 | 0 | 119 | 262 | 1 | 144 | 4.65e-87 | 257 |
| Msa1276040 | MtrunA17_Chr8g0343351 | 68.116 | 69 | 22 | 0 | 1 | 69 | 105 | 173 | 1.49e-23 | 94.4 |
| Msa1276040 | MtrunA17_Chr8g0343221 | 65.263 | 190 | 65 | 1 | 73 | 262 | 1 | 189 | 1.21e-76 | 232 |
| Msa1276040 | MtrunA17_Chr8g0343221 | 59.091 | 88 | 30 | 1 | 1 | 88 | 150 | 231 | 2.88e-25 | 100 |
| Msa1276040 | MtrunA17_Chr8g0343361 | 54.124 | 194 | 71 | 3 | 73 | 249 | 1 | 193 | 4.30e-63 | 198 |
| Msa1276040 | MtrunA17_Chr8g0343361 | 44.928 | 69 | 38 | 0 | 1 | 69 | 167 | 235 | 3.56e-11 | 61.6 |
| Msa1276040 | MtrunA17_Chr8g0343261 | 51.546 | 194 | 76 | 3 | 73 | 249 | 1 | 193 | 5.55e-60 | 190 |
| Msa1276040 | MtrunA17_Chr8g0343231 | 69.863 | 146 | 41 | 3 | 119 | 262 | 1 | 145 | 3.21e-56 | 177 |
| Msa1276040 | MtrunA17_Chr8g0343311 | 49.468 | 188 | 83 | 3 | 73 | 249 | 1 | 187 | 4.90e-56 | 181 |
| Msa1276040 | MtrunA17_Chr8g0343211 | 48.447 | 161 | 64 | 4 | 119 | 261 | 1 | 160 | 1.05e-37 | 130 |
| Msa1276040 | MtrunA17_Chr8g0343191 | 51.351 | 148 | 54 | 3 | 119 | 249 | 1 | 147 | 1.72e-37 | 130 |
| Msa1276040 | MtrunA17_Chr7g0235131 | 44.681 | 141 | 70 | 2 | 114 | 251 | 13 | 148 | 2.59e-32 | 117 |
| Msa1276040 | MtrunA17_Chr1g0182721 | 33.880 | 183 | 101 | 7 | 73 | 245 | 29 | 201 | 4.00e-22 | 92.4 |
| Msa1276040 | MtrunA17_Chr7g0262731 | 36.170 | 141 | 80 | 3 | 111 | 249 | 424 | 556 | 2.41e-19 | 87.0 |
| Msa1276040 | MtrunA17_Chr7g0254671 | 35.556 | 135 | 80 | 2 | 110 | 243 | 28 | 156 | 7.47e-19 | 82.4 |
| Msa1276040 | MtrunA17_Chr8g0343241 | 55.405 | 74 | 33 | 0 | 174 | 247 | 4 | 77 | 3.42e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276040 | AT3G13950.1 | 30.282 | 142 | 86 | 2 | 110 | 246 | 24 | 157 | 7.72e-15 | 71.6 |
Find 54 sgRNAs with CRISPR-Local
Find 544 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACACTGCGTATTATTATT+TGG | 0.053800 | 8_3:+10466334 | Msa1276040:CDS |
| TTACAAAGTTGCTTAAAATT+TGG | 0.132850 | 8_3:+10466280 | Msa1276040:CDS |
| CACACTGCGTATTATTATTT+GGG | 0.201281 | 8_3:+10466335 | Msa1276040:CDS |
| ATACCGAATAGCAATATTAA+TGG | 0.266714 | 8_3:+10476062 | Msa1276040:CDS |
| ACCTTTCTCCAACCTTTCTT+TGG | 0.296921 | 8_3:-10475631 | None:intergenic |
| TGGTTACCCCAGATCCTGTC+TGG | 0.315673 | 8_3:+10476082 | Msa1276040:CDS |
| ACCTTTCTTTGGTTCGTCAT+TGG | 0.323590 | 8_3:-10475620 | None:intergenic |
| TTATCTCCATCGTCTTTAAT+AGG | 0.335574 | 8_3:-10475796 | None:intergenic |
| AGGAAGTGAGAATAGTCTTC+AGG | 0.346217 | 8_3:-10475901 | None:intergenic |
| TTCTTTGGTTCGTCATTGGT+TGG | 0.355017 | 8_3:-10475616 | None:intergenic |
| TCTTTGGTTCGTCATTGGTT+GGG | 0.357553 | 8_3:-10475615 | None:intergenic |
| GCATCATCCCAAACAGGATC+TGG | 0.359385 | 8_3:-10466246 | None:intergenic |
| TTATCACCCCAGACAGGATC+TGG | 0.370204 | 8_3:-10476090 | None:intergenic |
| TGGTTACCCCAGATCCTGTT+TGG | 0.380833 | 8_3:+10466238 | Msa1276040:CDS |
| GTGGTATTCGTTTGAGTCAT+AGG | 0.402992 | 8_3:+10475980 | Msa1276040:CDS |
| TAACCATTAATATTGCTATT+CGG | 0.415211 | 8_3:-10476065 | None:intergenic |
| CTTTGGTTCGTCATTGGTTG+GGG | 0.416447 | 8_3:-10475614 | None:intergenic |
| AACATATTGTGTTCCAGAAA+AGG | 0.437742 | 8_3:-10475921 | None:intergenic |
| GGTTACCCCAGATCCTGTTT+GGG | 0.449719 | 8_3:+10466239 | Msa1276040:CDS |
| AGCAACAATAACGTTTCAAA+TGG | 0.467865 | 8_3:+10475747 | Msa1276040:CDS |
| CCCTCAGCATCATCCCAAAC+AGG | 0.472772 | 8_3:-10466252 | None:intergenic |
| GGAAGTGAGAATAGTCTTCA+GGG | 0.477791 | 8_3:-10475900 | None:intergenic |
| TGAGGACTTGAAGCTATGTC+CGG | 0.479790 | 8_3:+10475852 | Msa1276040:CDS |
| GATAATACAGCATGTTCTAA+AGG | 0.484905 | 8_3:+10475826 | Msa1276040:CDS |
| CATCATCCCAAACAGGATCT+GGG | 0.491065 | 8_3:-10466245 | None:intergenic |
| AAGTTGCTTAAAATTTGGAT+TGG | 0.496440 | 8_3:+10466285 | Msa1276040:CDS |
| AGCATGTTCTAAAGGTTATG+AGG | 0.503146 | 8_3:+10475834 | Msa1276040:CDS |
| ACCAAAGAAAGGTTGGAGAA+AGG | 0.503713 | 8_3:+10475630 | Msa1276040:CDS |
| GGTTACCCCAGATCCTGTCT+GGG | 0.508011 | 8_3:+10476083 | Msa1276040:CDS |
| TCCTGTCTGGGGTGATAATG+AGG | 0.519092 | 8_3:+10476095 | Msa1276040:CDS |
| TGAGTCATAGGTTTAGTATG+TGG | 0.529830 | 8_3:+10475992 | Msa1276040:CDS |
| TCCTGTTTGGGATGATGCTG+AGG | 0.534190 | 8_3:+10466251 | Msa1276040:CDS |
| TTTAATAGGCCTAACGCCAC+CGG | 0.537214 | 8_3:-10475782 | None:intergenic |
| ACACTGCGTATTATTATTTG+GGG | 0.542002 | 8_3:+10466336 | Msa1276040:CDS |
| ACCAATGACGAACCAAAGAA+AGG | 0.542566 | 8_3:+10475619 | Msa1276040:CDS |
| TATCACCCCAGACAGGATCT+GGG | 0.544206 | 8_3:-10476089 | None:intergenic |
| ATGACGAACCAAAGAAAGGT+TGG | 0.557249 | 8_3:+10475623 | Msa1276040:CDS |
| CCTGTTTGGGATGATGCTGA+GGG | 0.567207 | 8_3:+10466252 | Msa1276040:CDS |
| ACCTCATTATCACCCCAGAC+AGG | 0.593150 | 8_3:-10476096 | None:intergenic |
| TTAATAGGCCTAACGCCACC+GGG | 0.596372 | 8_3:-10475781 | None:intergenic |
| GAGGACTTGAAGCTATGTCC+GGG | 0.599303 | 8_3:+10475853 | Msa1276040:CDS |
| AACAATCAAGTGGATAGTCA+TGG | 0.609374 | 8_3:+10475577 | Msa1276040:CDS |
| GAGTGGTTGGATCAAATGAG+AGG | 0.610628 | 8_3:+10475697 | Msa1276040:CDS |
| ATGGCTAAGACAGCATTACC+CGG | 0.613591 | 8_3:-10475871 | None:intergenic |
| ACAGACAATGAACAATCAAG+TGG | 0.632140 | 8_3:+10475567 | Msa1276040:CDS |
| AGTGGTTGGATCAAATGAGA+GGG | 0.637995 | 8_3:+10475698 | Msa1276040:CDS |
| ATCATCCCAAACAGGATCTG+GGG | 0.642014 | 8_3:-10466244 | None:intergenic |
| CAAATGGCTATAAATCCGCC+CGG | 0.646692 | 8_3:+10475763 | Msa1276040:CDS |
| ATCACCCCAGACAGGATCTG+GGG | 0.669371 | 8_3:-10476088 | None:intergenic |
| ATAGTCTTCAGGGTATACAA+TGG | 0.682742 | 8_3:-10475890 | None:intergenic |
| GTTAGGCCTATTAAAGACGA+TGG | 0.688519 | 8_3:+10475790 | Msa1276040:CDS |
| GTTACCCCAGATCCTGTCTG+GGG | 0.708353 | 8_3:+10476084 | Msa1276040:CDS |
| ATGGCTATAAATCCGCCCGG+TGG | 0.749586 | 8_3:+10475766 | Msa1276040:CDS |
| ATAGGCCTAACGCCACCGGG+CGG | 0.772586 | 8_3:-10475778 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr8_3:10467537-10467556 | Msa1276040:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr8_3:10467538-10467557 | Msa1276040:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr8_3:10467538-10467557 | Msa1276040:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr8_3:10467537-10467556 | Msa1276040:intron | 0.0% |
| !! | TATATATATATATATAACTC+TGG | - | chr8_3:10467533-10467552 | None:intergenic | 10.0% |
| !! | TTATATATATATATATAGCT+AGG | + | chr8_3:10468022-10468041 | Msa1276040:intron | 10.0% |
| !!! | ATCAAATTAATTTTAACTAT+TGG | + | chr8_3:10468093-10468112 | Msa1276040:intron | 10.0% |
| !!! | TGTATTTTTTTTTTTATGAA+AGG | + | chr8_3:10468469-10468488 | Msa1276040:intron | 10.0% |
| !! | ATAAAAAAATTAATTAGATG+CGG | - | chr8_3:10469602-10469621 | None:intergenic | 10.0% |
| !! | AATAAATAATTATATACAGA+AGG | + | chr8_3:10470244-10470263 | Msa1276040:intron | 10.0% |
| !!! | TTATTTTTTTTTGTTTTTGA+AGG | - | chr8_3:10471237-10471256 | None:intergenic | 10.0% |
| !! | TTCAAAAACAAAAAAAAATA+AGG | + | chr8_3:10471236-10471255 | Msa1276040:intron | 10.0% |
| !!! | TAATTTTATAAAGATACTTT+TGG | - | chr8_3:10472491-10472510 | None:intergenic | 10.0% |
| !!! | TTTTAAAGAATATATAAACA+GGG | - | chr8_3:10474428-10474447 | None:intergenic | 10.0% |
| !!! | TTTTTAAAGAATATATAAAC+AGG | - | chr8_3:10474429-10474448 | None:intergenic | 10.0% |
| !! | AAATTTATTCATATTGAAAT+TGG | - | chr8_3:10474698-10474717 | None:intergenic | 10.0% |
| !!! | TAATAATTTTCTGATTTATT+CGG | - | chr8_3:10475240-10475259 | None:intergenic | 10.0% |
| !!! | TTTCCTTAATTATTTTAGTT+TGG | + | chr8_3:10466738-10466757 | Msa1276040:intron | 15.0% |
| !!! | TTCCTTAATTATTTTAGTTT+GGG | + | chr8_3:10466739-10466758 | Msa1276040:intron | 15.0% |
| !!! | ATCCTTTATTATGAATTTTT+TGG | + | chr8_3:10467288-10467307 | Msa1276040:intron | 15.0% |
| !! | ATCCAAAAAATTCATAATAA+AGG | - | chr8_3:10467293-10467312 | None:intergenic | 15.0% |
| !!! | TTATTATGAATTTTTTGGAT+AGG | + | chr8_3:10467293-10467312 | Msa1276040:intron | 15.0% |
| !!! | TATTATGAATTTTTTGGATA+GGG | + | chr8_3:10467294-10467313 | Msa1276040:intron | 15.0% |
| !! | TTGTTTATAATAGAAAAACA+TGG | + | chr8_3:10467912-10467931 | Msa1276040:intron | 15.0% |
| !! | TGTTTATAATAGAAAAACAT+GGG | + | chr8_3:10467913-10467932 | Msa1276040:intron | 15.0% |
| !! | AATATTTATCCATTAAAATC+CGG | - | chr8_3:10468231-10468250 | None:intergenic | 15.0% |
| !!! | GATTTTAATGGATAAATATT+AGG | + | chr8_3:10468231-10468250 | Msa1276040:intron | 15.0% |
| !! | AATTTCTTGATAAAATCTAA+GGG | - | chr8_3:10468382-10468401 | None:intergenic | 15.0% |
| !! | TAATTTCTTGATAAAATCTA+AGG | - | chr8_3:10468383-10468402 | None:intergenic | 15.0% |
| !! | ATAAATAAGATTGAAATCTA+AGG | + | chr8_3:10468495-10468514 | Msa1276040:intron | 15.0% |
| !! | TAAATAAGATTGAAATCTAA+GGG | + | chr8_3:10468496-10468515 | Msa1276040:intron | 15.0% |
| !! | GTATATTATAGAAAAAATCA+AGG | + | chr8_3:10469622-10469641 | Msa1276040:intron | 15.0% |
| !!! | AATTATTTATTTTTGGTCTT+TGG | - | chr8_3:10470235-10470254 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAATAACTAACA+TGG | + | chr8_3:10470305-10470324 | Msa1276040:intron | 15.0% |
| !!! | TTTTTTCTTTTTGTATAGTT+TGG | + | chr8_3:10470450-10470469 | Msa1276040:intron | 15.0% |
| !!! | AAAATTTCTCATTCATTTTA+GGG | - | chr8_3:10471968-10471987 | None:intergenic | 15.0% |
| !!! | TAAAATTTCTCATTCATTTT+AGG | - | chr8_3:10471969-10471988 | None:intergenic | 15.0% |
| !! | ACATTGAATAATAAATGTAT+AGG | + | chr8_3:10472298-10472317 | Msa1276040:intron | 15.0% |
| !!! | TACTTTTTCTTTGTAAATTT+TGG | - | chr8_3:10472580-10472599 | None:intergenic | 15.0% |
| !! | ATATGATAGATTTGATATAT+TGG | - | chr8_3:10473040-10473059 | None:intergenic | 15.0% |
| !! | AAAAATTGTCAAGATTATAA+CGG | - | chr8_3:10474159-10474178 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACATTTAGTGA+CGG | + | chr8_3:10474296-10474315 | Msa1276040:intron | 15.0% |
| !!! | TTTTTTTTTTCCAAATTTTG+AGG | + | chr8_3:10474346-10474365 | Msa1276040:intron | 15.0% |
| !! | TTACAAAGTTGCTTAAAATT+TGG | + | chr8_3:10466280-10466299 | Msa1276040:CDS | 20.0% |
| !! | TACCCAAACTAAAATAATTA+AGG | - | chr8_3:10466744-10466763 | None:intergenic | 20.0% |
| !!! | AATTATTTTAGTTTGGGTAT+TGG | + | chr8_3:10466745-10466764 | Msa1276040:intron | 20.0% |
| !! | AGAGAGATACAAATATATTT+GGG | - | chr8_3:10466780-10466799 | None:intergenic | 20.0% |
| !! | AAGAGAGATACAAATATATT+TGG | - | chr8_3:10466781-10466800 | None:intergenic | 20.0% |
| !! | AGAACTAAATTAAAATGCAA+AGG | + | chr8_3:10466914-10466933 | Msa1276040:intron | 20.0% |
| !! | GAACTAAATTAAAATGCAAA+GGG | + | chr8_3:10466915-10466934 | Msa1276040:intron | 20.0% |
| !!! | TTATATTGATATCTGGATTT+TGG | + | chr8_3:10467143-10467162 | Msa1276040:intron | 20.0% |
| !!! | TTTAACTTAAGTGAAATTTG+TGG | + | chr8_3:10467499-10467518 | Msa1276040:intron | 20.0% |
| !! | AAAGTTTAATAGAGACAAAA+GGG | - | chr8_3:10467849-10467868 | None:intergenic | 20.0% |
| !! | TAAAGTTTAATAGAGACAAA+AGG | - | chr8_3:10467850-10467869 | None:intergenic | 20.0% |
| !! | AGAACTCTAATATAATTCTT+AGG | + | chr8_3:10468727-10468746 | Msa1276040:intron | 20.0% |
| !! | ATTGAATCTGTATAATACAT+AGG | - | chr8_3:10469154-10469173 | None:intergenic | 20.0% |
| !! | ATCATGCATATTATGAAAAA+CGG | + | chr8_3:10469309-10469328 | Msa1276040:intron | 20.0% |
| !! | TACATAACAAATATGCATTA+TGG | + | chr8_3:10469351-10469370 | Msa1276040:intron | 20.0% |
| !! | TACTAATATTCTAATATCCT+TGG | - | chr8_3:10469472-10469491 | None:intergenic | 20.0% |
| !! | AGGATATTAGAATATTAGTA+AGG | + | chr8_3:10469472-10469491 | Msa1276040:intron | 20.0% |
| !! | AATCTATTTATTGACAACTT+TGG | + | chr8_3:10469831-10469850 | Msa1276040:intron | 20.0% |
| !! | AATAAGAAGAGAGAAAAATA+AGG | - | chr8_3:10469863-10469882 | None:intergenic | 20.0% |
| !!! | TTATTTTTCTCTCTTCTTAT+TGG | + | chr8_3:10469862-10469881 | Msa1276040:intron | 20.0% |
| !!! | GAAGATTAGTTAAACAAATT+TGG | + | chr8_3:10470113-10470132 | Msa1276040:intron | 20.0% |
| !!! | TAAACAAATTTGGTTTTAAC+AGG | + | chr8_3:10470123-10470142 | Msa1276040:intron | 20.0% |
| !!! | ACACATTTTTATAACTAACA+TGG | + | chr8_3:10470274-10470293 | Msa1276040:intron | 20.0% |
| !!! | TTTTTCCAAGATTCAAATAT+GGG | - | chr8_3:10470369-10470388 | None:intergenic | 20.0% |
| !!! | TTTTTTCCAAGATTCAAATA+TGG | - | chr8_3:10470370-10470389 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCCTTCTTGTTT+TGG | - | chr8_3:10470511-10470530 | None:intergenic | 20.0% |
| !!! | CTAGATAAATTTTTTCTTTG+TGG | + | chr8_3:10470646-10470665 | Msa1276040:intron | 20.0% |
| !!! | CTTTATGGTTGTTAAAATTT+TGG | - | chr8_3:10470872-10470891 | None:intergenic | 20.0% |
| !! | AAAAATATTGCATGAAACAT+GGG | - | chr8_3:10470955-10470974 | None:intergenic | 20.0% |
| !! | AAAAAATATTGCATGAAACA+TGG | - | chr8_3:10470956-10470975 | None:intergenic | 20.0% |
| !!! | TAAAATGACTTAAGTTTGTT+TGG | + | chr8_3:10471013-10471032 | Msa1276040:intron | 20.0% |
| !!! | AAAATGACTTAAGTTTGTTT+GGG | + | chr8_3:10471014-10471033 | Msa1276040:intron | 20.0% |
| !! | GAAACTTTATATAAAAAACG+TGG | + | chr8_3:10471108-10471127 | Msa1276040:intron | 20.0% |
| !! | CCTTTATATTTCATGATATA+AGG | - | chr8_3:10471206-10471225 | None:intergenic | 20.0% |
| !! | CCTTATATCATGAAATATAA+AGG | + | chr8_3:10471203-10471222 | Msa1276040:intron | 20.0% |
| !! | ATTTATTTAGTGTTAAAGCA+TGG | + | chr8_3:10471266-10471285 | Msa1276040:intron | 20.0% |
| !! | TTTATTTAGTGTTAAAGCAT+GGG | + | chr8_3:10471267-10471286 | Msa1276040:intron | 20.0% |
| !!! | TTGTTTTGCTTTCTTTTTAA+TGG | + | chr8_3:10471331-10471350 | Msa1276040:intron | 20.0% |
| !!! | TAAACTTTTTTGTTTGTCAA+AGG | + | chr8_3:10471384-10471403 | Msa1276040:intron | 20.0% |
| !!! | AAACTTTTTTGTTTGTCAAA+GGG | + | chr8_3:10471385-10471404 | Msa1276040:intron | 20.0% |
| !! | TCAAAAAAAAAAACTAATGC+CGG | - | chr8_3:10471417-10471436 | None:intergenic | 20.0% |
| !! | ATATGTTGAATTCACTTATT+TGG | - | chr8_3:10471556-10471575 | None:intergenic | 20.0% |
| !! | AACATCGTTAAAAATGTAAA+AGG | - | chr8_3:10471823-10471842 | None:intergenic | 20.0% |
| !!! | TATTAAACTTTTCTGATAAG+AGG | + | chr8_3:10472039-10472058 | Msa1276040:intron | 20.0% |
| !!! | TTCTATTGTTTTTTCAAAAG+AGG | - | chr8_3:10472230-10472249 | None:intergenic | 20.0% |
| !!! | AATGTATCTAGTCTTTATTA+TGG | - | chr8_3:10472325-10472344 | None:intergenic | 20.0% |
| !!! | TGTTATTTGAACAATCATTT+GGG | + | chr8_3:10472535-10472554 | Msa1276040:intron | 20.0% |
| !!! | AAACATTTTGCTTAATGAAA+AGG | + | chr8_3:10472731-10472750 | Msa1276040:intron | 20.0% |
| !! | TGAATTAGTGTTAGATATAT+TGG | - | chr8_3:10472866-10472885 | None:intergenic | 20.0% |
| !! | CTTAATCTTCTTAAATTAGT+GGG | - | chr8_3:10473144-10473163 | None:intergenic | 20.0% |
| !! | ACTTAATCTTCTTAAATTAG+TGG | - | chr8_3:10473145-10473164 | None:intergenic | 20.0% |
| !!! | AATTTAAGAAGATTAAGTTG+AGG | + | chr8_3:10473147-10473166 | Msa1276040:intron | 20.0% |
| !! | ATATAAATAAAAAACAGCCA+AGG | + | chr8_3:10473928-10473947 | Msa1276040:intron | 20.0% |
| !! | TAATTACAATTTACATACCT+TGG | - | chr8_3:10473948-10473967 | None:intergenic | 20.0% |
| !! | CAATACAAAAATTCATCATT+AGG | - | chr8_3:10473984-10474003 | None:intergenic | 20.0% |
| !! | ATATTCAATCCTTTATATAC+AGG | + | chr8_3:10474109-10474128 | Msa1276040:intron | 20.0% |
| !! | TATTCAATCCTTTATATACA+GGG | + | chr8_3:10474110-10474129 | Msa1276040:intron | 20.0% |
| !! | AAAATTGTCAAGATTATAAC+GGG | - | chr8_3:10474158-10474177 | None:intergenic | 20.0% |
| !!! | TAAATGTTTTTTTTTTCCGT+AGG | - | chr8_3:10474292-10474311 | None:intergenic | 20.0% |
| !! | AAAAATAAAACTTGTACCTA+CGG | - | chr8_3:10474329-10474348 | None:intergenic | 20.0% |
| !!! | AATATACAACATTTTGCTTT+TGG | + | chr8_3:10474579-10474598 | Msa1276040:intron | 20.0% |
| !!! | TCATTTTAGTCTTTAATTTG+AGG | + | chr8_3:10474639-10474658 | Msa1276040:intron | 20.0% |
| !!! | CATTTTAGTCTTTAATTTGA+GGG | + | chr8_3:10474640-10474659 | Msa1276040:intron | 20.0% |
| !! | AAACAGAAGATTAATAAGTT+TGG | + | chr8_3:10474729-10474748 | Msa1276040:intron | 20.0% |
| !! | ATAGCAGTAAGTAAATTTAT+AGG | + | chr8_3:10474847-10474866 | Msa1276040:intron | 20.0% |
| !! | AGTAAGTAAATTTATAGGAA+GGG | + | chr8_3:10474852-10474871 | Msa1276040:intron | 20.0% |
| !!! | TTTTCTTCTTTCAAAGTAAT+CGG | + | chr8_3:10475334-10475353 | Msa1276040:intron | 20.0% |
| !! | TAAATATCTGTTTGTGATTA+AGG | - | chr8_3:10475483-10475502 | None:intergenic | 20.0% |
| !! | ACAGATATTTATGAGTTATA+TGG | + | chr8_3:10475492-10475511 | Msa1276040:intron | 20.0% |
| !!! | ATATTTCATTGTTGTTTTGA+AGG | + | chr8_3:10475544-10475563 | Msa1276040:intron | 20.0% |
| !!! | TAACCATTAATATTGCTATT+CGG | - | chr8_3:10476068-10476087 | None:intergenic | 20.0% |
| ! | TTACAAAAATGCAGTATCAA+TGG | + | chr8_3:10466218-10466237 | Msa1276040:CDS | 25.0% |
| ! | AAGTTGCTTAAAATTTGGAT+TGG | + | chr8_3:10466285-10466304 | Msa1276040:CDS | 25.0% |
| ! | AGAGATACAAATATATTTGG+GGG | - | chr8_3:10466778-10466797 | None:intergenic | 25.0% |
| ! | GAGAGATACAAATATATTTG+GGG | - | chr8_3:10466779-10466798 | None:intergenic | 25.0% |
| !!! | ACATTATCTTTTGTCGTTTT+AGG | - | chr8_3:10466950-10466969 | None:intergenic | 25.0% |
| ! | AACGACAAAAGATAATGTTA+AGG | + | chr8_3:10466952-10466971 | Msa1276040:intron | 25.0% |
| ! | ACGACAAAAGATAATGTTAA+GGG | + | chr8_3:10466953-10466972 | Msa1276040:intron | 25.0% |
| !! | TGAATAGTGTAATTGGTTTA+GGG | - | chr8_3:10467076-10467095 | None:intergenic | 25.0% |
| !! | ATGAATAGTGTAATTGGTTT+AGG | - | chr8_3:10467077-10467096 | None:intergenic | 25.0% |
| ! | TGGAATATGAATAGTGTAAT+TGG | - | chr8_3:10467083-10467102 | None:intergenic | 25.0% |
| ! | AATCGTGTTATATTGATATC+TGG | + | chr8_3:10467136-10467155 | Msa1276040:intron | 25.0% |
| ! | ATGATGTTATATTACACAAG+TGG | - | chr8_3:10467270-10467289 | None:intergenic | 25.0% |
| ! | TGGGATTTAGTACATATAAA+CGG | - | chr8_3:10467452-10467471 | None:intergenic | 25.0% |
| ! | ATTATTTATCTACGAGAAAC+CGG | + | chr8_3:10468209-10468228 | Msa1276040:intron | 25.0% |
| ! | AGAAAATTTCAAGAATGACA+TGG | + | chr8_3:10468345-10468364 | Msa1276040:intron | 25.0% |
| ! | TGTTGTCCAAATACAATTTA+TGG | + | chr8_3:10469077-10469096 | Msa1276040:intron | 25.0% |
| ! | CTACTACCATAAATTGTATT+TGG | - | chr8_3:10469086-10469105 | None:intergenic | 25.0% |
| ! | CAAATACAATTTATGGTAGT+AGG | + | chr8_3:10469084-10469103 | Msa1276040:intron | 25.0% |
| ! | GTTGAAATGATTGTGTATAA+AGG | - | chr8_3:10469656-10469675 | None:intergenic | 25.0% |
| ! | TTCAACAATGACATTTCAAA+TGG | + | chr8_3:10469670-10469689 | Msa1276040:intron | 25.0% |
| !! | CGAGAATGTATGATTTTTAA+AGG | + | chr8_3:10469792-10469811 | Msa1276040:intron | 25.0% |
| ! | AAAACAATGAAGAGAGAAAA+AGG | + | chr8_3:10469888-10469907 | Msa1276040:intron | 25.0% |
| !! | TTCTTTTTGTATAGTTTGGA+CGG | + | chr8_3:10470454-10470473 | Msa1276040:intron | 25.0% |
| ! | ATAATGAAACCAAAACAAGA+AGG | + | chr8_3:10470499-10470518 | Msa1276040:intron | 25.0% |
| ! | GCATAATAAACACAACTTTA+TGG | - | chr8_3:10470887-10470906 | None:intergenic | 25.0% |
| !! | ATGTAAAATTTTCCACCTTA+TGG | - | chr8_3:10471064-10471083 | None:intergenic | 25.0% |
| !! | GTGGAAAATTTTACATAAAG+TGG | + | chr8_3:10471068-10471087 | Msa1276040:intron | 25.0% |
| ! | ATCGAAAGAAAGAGAAAAAA+AGG | - | chr8_3:10471533-10471552 | None:intergenic | 25.0% |
| ! | TTGTTTGTCAAGTAGTATAA+TGG | + | chr8_3:10471930-10471949 | Msa1276040:intron | 25.0% |
| ! | TAGAATCCTCGTAATTTATA+GGG | - | chr8_3:10472007-10472026 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | chr8_3:10472264-10472283 | None:intergenic | 25.0% |
| ! | TATCCAATGTATCTAAAAAG+TGG | + | chr8_3:10472348-10472367 | Msa1276040:intron | 25.0% |
| ! | TCAACAAACTTTGTACAAAA+AGG | - | chr8_3:10472432-10472451 | None:intergenic | 25.0% |
| !!! | TATAAAGATACTTTTGGTGT+TGG | - | chr8_3:10472485-10472504 | None:intergenic | 25.0% |
| !!! | ACATCTAAGTTTTTTCATTG+AGG | + | chr8_3:10472510-10472529 | Msa1276040:intron | 25.0% |
| !!! | GTGTTATTTGAACAATCATT+TGG | + | chr8_3:10472534-10472553 | Msa1276040:intron | 25.0% |
| ! | GTTATTTGAACAATCATTTG+GGG | + | chr8_3:10472536-10472555 | Msa1276040:intron | 25.0% |
| ! | ACTTTATCTCTCTATTACTT+TGG | - | chr8_3:10472618-10472637 | None:intergenic | 25.0% |
| ! | ACATTGTTTGTATTTCTTGT+AGG | + | chr8_3:10473617-10473636 | Msa1276040:intron | 25.0% |
| !!! | GTCATTTTATGCTATTAACA+TGG | + | chr8_3:10473652-10473671 | Msa1276040:intron | 25.0% |
| ! | CAAATTCGCTAAAAACAAAA+AGG | - | chr8_3:10473705-10473724 | None:intergenic | 25.0% |
| !! | AGGAATTTTCATAAAGATTC+AGG | - | chr8_3:10473778-10473797 | None:intergenic | 25.0% |
| ! | AATCATAAGTTGTGAGATAA+GGG | - | chr8_3:10473807-10473826 | None:intergenic | 25.0% |
| ! | TAATCATAAGTTGTGAGATA+AGG | - | chr8_3:10473808-10473827 | None:intergenic | 25.0% |
| ! | ATGACGTAAACTTACATATA+TGG | + | chr8_3:10474057-10474076 | Msa1276040:intron | 25.0% |
| ! | TGACGTAAACTTACATATAT+GGG | + | chr8_3:10474058-10474077 | Msa1276040:intron | 25.0% |
| ! | AAATTGTCAAGATTATAACG+GGG | - | chr8_3:10474157-10474176 | None:intergenic | 25.0% |
| ! | AATCCTTATATATCATGTTC+AGG | + | chr8_3:10474458-10474477 | Msa1276040:intron | 25.0% |
| ! | ATTCCTGAACATGATATATA+AGG | - | chr8_3:10474464-10474483 | None:intergenic | 25.0% |
| ! | CAGTAAGTAAATTTATAGGA+AGG | + | chr8_3:10474851-10474870 | Msa1276040:intron | 25.0% |
| ! | TAGCACCTTTATATTAAGAA+AGG | - | chr8_3:10474902-10474921 | None:intergenic | 25.0% |
| ! | TGTACAAGTGATATTTACAA+GGG | - | chr8_3:10475012-10475031 | None:intergenic | 25.0% |
| ! | ACTGATGAAAATAATTAGAC+AGG | + | chr8_3:10475091-10475110 | Msa1276040:intron | 25.0% |
| !!! | TTTTAGAACTAGTAGTGAAT+TGG | + | chr8_3:10475653-10475672 | Msa1276040:CDS | 25.0% |
| ! | ATACCGAATAGCAATATTAA+TGG | + | chr8_3:10476062-10476081 | Msa1276040:CDS | 25.0% |
| TCACACTGCGTATTATTATT+TGG | + | chr8_3:10466334-10466353 | Msa1276040:CDS | 30.0% | |
| CACACTGCGTATTATTATTT+GGG | + | chr8_3:10466335-10466354 | Msa1276040:CDS | 30.0% | |
| ACACTGCGTATTATTATTTG+GGG | + | chr8_3:10466336-10466355 | Msa1276040:CDS | 30.0% | |
| ! | TTAGTGATTATAGTTTGCCA+GGG | + | chr8_3:10466512-10466531 | Msa1276040:intron | 30.0% |
| CCAAATGAAGTGGTTAATTA+GGG | - | chr8_3:10466594-10466613 | None:intergenic | 30.0% | |
| ! | TTCTAGCAAGGTTTTTAATG+AGG | + | chr8_3:10466704-10466723 | Msa1276040:intron | 30.0% |
| GAGATACAAATATATTTGGG+GGG | - | chr8_3:10466777-10466796 | None:intergenic | 30.0% | |
| !!! | TATCTTTTGTCGTTTTAGGT+TGG | - | chr8_3:10466946-10466965 | None:intergenic | 30.0% |
| CGACAAAAGATAATGTTAAG+GGG | + | chr8_3:10466954-10466973 | Msa1276040:intron | 30.0% | |
| GACAAAAGATAATGTTAAGG+GGG | + | chr8_3:10466955-10466974 | Msa1276040:intron | 30.0% | |
| TGACTAGTGTATGAATTTGT+TGG | - | chr8_3:10466985-10467004 | None:intergenic | 30.0% | |
| !! | GATATCTGGATTTTGGTAAT+AGG | + | chr8_3:10467150-10467169 | Msa1276040:intron | 30.0% |
| !! | TTCAAAAGCATCAACACAAA+AGG | - | chr8_3:10467388-10467407 | None:intergenic | 30.0% |
| !! | TTTTGTGTTGATGCTTTTGA+AGG | + | chr8_3:10467387-10467406 | Msa1276040:intron | 30.0% |
| TATGCTTCTGTATCTATGTA+TGG | - | chr8_3:10467421-10467440 | None:intergenic | 30.0% | |
| ! | ATAGAAGACACATTTTGTGA+AGG | + | chr8_3:10467630-10467649 | Msa1276040:intron | 30.0% |
| ! | ATAGAAAAACATGGGTGTTT+TGG | + | chr8_3:10467921-10467940 | Msa1276040:intron | 30.0% |
| ! | ATTTGCACCTTAGTGTTTTT+AGG | + | chr8_3:10467971-10467990 | Msa1276040:intron | 30.0% |
| TTGTCACTAACTTTGTAAAC+TGG | - | chr8_3:10468159-10468178 | None:intergenic | 30.0% | |
| !!! | ATTTTTAGGACATGTAACAG+AGG | + | chr8_3:10468787-10468806 | Msa1276040:intron | 30.0% |
| AAAGGATATGTAAAAAAGCC+AGG | + | chr8_3:10468860-10468879 | Msa1276040:intron | 30.0% | |
| AAGGATATGTAAAAAAGCCA+GGG | + | chr8_3:10468861-10468880 | Msa1276040:intron | 30.0% | |
| ! | ATCTACAACTTGTTTCAATG+AGG | + | chr8_3:10469004-10469023 | Msa1276040:intron | 30.0% |
| ACAATTTATGGTAGTAGGAT+TGG | + | chr8_3:10469089-10469108 | Msa1276040:intron | 30.0% | |
| ATATTCTAATATCCTTGGAG+AGG | - | chr8_3:10469467-10469486 | None:intergenic | 30.0% | |
| ATATTAGTAAGGCTAAAACC+CGG | + | chr8_3:10469483-10469502 | Msa1276040:intron | 30.0% | |
| !! | TGGATTTTAATCTACTAGCT+AGG | + | chr8_3:10469690-10469709 | Msa1276040:intron | 30.0% |
| !! | ATTTTAATCTACTAGCTAGG+TGG | + | chr8_3:10469693-10469712 | Msa1276040:intron | 30.0% |
| !!! | TGTGTCTTGTTTTTGTATAC+AGG | - | chr8_3:10469752-10469771 | None:intergenic | 30.0% |
| AGAAGAGAGAAAAATAAGGT+TGG | - | chr8_3:10469859-10469878 | None:intergenic | 30.0% | |
| GTCAAAAAGTTGTCTCAAAA+TGG | + | chr8_3:10469955-10469974 | Msa1276040:intron | 30.0% | |
| AATAACTAACATGGCATGTT+TGG | + | chr8_3:10470314-10470333 | Msa1276040:intron | 30.0% | |
| ATAACTAACATGGCATGTTT+GGG | + | chr8_3:10470315-10470334 | Msa1276040:intron | 30.0% | |
| GGATTGGAGATGTTAATAAT+TGG | - | chr8_3:10470342-10470361 | None:intergenic | 30.0% | |
| TTGAATCCATATTCAGTCAA+AGG | + | chr8_3:10470391-10470410 | Msa1276040:intron | 30.0% | |
| AGAGTTTCTTCATCAAAGTT+AGG | + | chr8_3:10470414-10470433 | Msa1276040:intron | 30.0% | |
| GAGTTTCTTCATCAAAGTTA+GGG | + | chr8_3:10470415-10470434 | Msa1276040:intron | 30.0% | |
| ! | TCTTTTTGTATAGTTTGGAC+GGG | + | chr8_3:10470455-10470474 | Msa1276040:intron | 30.0% |
| !!! | AACCCTGGTGTTTTTTTTAA+GGG | + | chr8_3:10470569-10470588 | Msa1276040:intron | 30.0% |
| AATTATGTACTTCCTTTCCA+GGG | - | chr8_3:10470616-10470635 | None:intergenic | 30.0% | |
| AAATTATGTACTTCCTTTCC+AGG | - | chr8_3:10470617-10470636 | None:intergenic | 30.0% | |
| !! | CCTTTAAAACATCTGTCATA+TGG | - | chr8_3:10470681-10470700 | None:intergenic | 30.0% |
| !! | CCATATGACAGATGTTTTAA+AGG | + | chr8_3:10470678-10470697 | Msa1276040:intron | 30.0% |
| CTGATTAAAAAATAACCCTC+TGG | - | chr8_3:10470776-10470795 | None:intergenic | 30.0% | |
| TCTAACAAGGTGAAATCATT+CGG | + | chr8_3:10470825-10470844 | Msa1276040:intron | 30.0% | |
| AAAACACTAATTGCTCCATA+AGG | + | chr8_3:10471046-10471065 | Msa1276040:intron | 30.0% | |
| TTGACCTTTACTTTATGTGT+GGG | + | chr8_3:10471293-10471312 | Msa1276040:intron | 30.0% | |
| ! | TCTTATTTCGCATCTTGTTA+CGG | + | chr8_3:10471663-10471682 | Msa1276040:intron | 30.0% |
| GGTTCATATTGAAAGAGATT+CGG | + | chr8_3:10471695-10471714 | Msa1276040:intron | 30.0% | |
| !! | TCGTTATATGCTATTGACTT+GGG | + | chr8_3:10471772-10471791 | Msa1276040:intron | 30.0% |
| ATTAACCCCTATAAATTACG+AGG | + | chr8_3:10471998-10472017 | Msa1276040:intron | 30.0% | |
| AGAATCCTCGTAATTTATAG+GGG | - | chr8_3:10472006-10472025 | None:intergenic | 30.0% | |
| GTAGAATCCTCGTAATTTAT+AGG | - | chr8_3:10472008-10472027 | None:intergenic | 30.0% | |
| TCACAAAAGTTGTCACTAAA+TGG | - | chr8_3:10472099-10472118 | None:intergenic | 30.0% | |
| TTTCTCTCTCTTTATTGCTA+TGG | + | chr8_3:10472123-10472142 | Msa1276040:intron | 30.0% | |
| !!! | ACTCCACTTTTTAGATACAT+TGG | - | chr8_3:10472354-10472373 | None:intergenic | 30.0% |
| TTGCTTATAATATTGACCAG+AGG | + | chr8_3:10472375-10472394 | Msa1276040:intron | 30.0% | |
| TGCTTATAATATTGACCAGA+GGG | + | chr8_3:10472376-10472395 | Msa1276040:intron | 30.0% | |
| AAATATGAGTTGTTCATGGT+TGG | - | chr8_3:10472962-10472981 | None:intergenic | 30.0% | |
| ACGAAAATATGAGTTGTTCA+TGG | - | chr8_3:10472966-10472985 | None:intergenic | 30.0% | |
| TCTTATCTCTTTCATTCTCA+AGG | + | chr8_3:10473067-10473086 | Msa1276040:intron | 30.0% | |
| TTCATTCTCAAGGTCATAAT+AGG | + | chr8_3:10473077-10473096 | Msa1276040:intron | 30.0% | |
| TCATTCTCAAGGTCATAATA+GGG | + | chr8_3:10473078-10473097 | Msa1276040:intron | 30.0% | |
| ! | TTTTTGTAAGCTAGTTGTCT+CGG | - | chr8_3:10473213-10473232 | None:intergenic | 30.0% |
| GCTAGATATAACTCTTTGAT+TGG | - | chr8_3:10473321-10473340 | None:intergenic | 30.0% | |
| ! | CATAAAGATTCAGGTGTTTT+TGG | - | chr8_3:10473769-10473788 | None:intergenic | 30.0% |
| ATGCATCAACTACAATAGTT+AGG | + | chr8_3:10474022-10474041 | Msa1276040:intron | 30.0% | |
| TGCATCAACTACAATAGTTA+GGG | + | chr8_3:10474023-10474042 | Msa1276040:intron | 30.0% | |
| GTCAATTATGCATTATCCAT+AGG | - | chr8_3:10474241-10474260 | None:intergenic | 30.0% | |
| ! | GTCTTTTAGACTTTTACCTA+CGG | + | chr8_3:10474273-10474292 | Msa1276040:intron | 30.0% |
| AAAGAATATATAAACAGGGC+CGG | - | chr8_3:10474424-10474443 | None:intergenic | 30.0% | |
| AGTAAATTTATAGGAAGGGA+AGG | + | chr8_3:10474856-10474875 | Msa1276040:intron | 30.0% | |
| GCTCTCCTTTCTTAATATAA+AGG | + | chr8_3:10474894-10474913 | Msa1276040:intron | 30.0% | |
| !!! | ACAAGAAGTTACTTTTTGCT+GGG | - | chr8_3:10474963-10474982 | None:intergenic | 30.0% |
| GTGTACAAGTGATATTTACA+AGG | - | chr8_3:10475013-10475032 | None:intergenic | 30.0% | |
| !! | ACAACATCAATTTTGAGAGA+TGG | - | chr8_3:10475368-10475387 | None:intergenic | 30.0% |
| AATTGATGTTGTATCGTATC+AGG | + | chr8_3:10475376-10475395 | Msa1276040:intron | 30.0% | |
| CATACAAAAACAAGAATGAG+TGG | + | chr8_3:10475680-10475699 | Msa1276040:CDS | 30.0% | |
| AGCAACAATAACGTTTCAAA+TGG | + | chr8_3:10475747-10475766 | Msa1276040:CDS | 30.0% | |
| TTATCTCCATCGTCTTTAAT+AGG | - | chr8_3:10475799-10475818 | None:intergenic | 30.0% | |
| GATAATACAGCATGTTCTAA+AGG | + | chr8_3:10475826-10475845 | Msa1276040:CDS | 30.0% | |
| AACATATTGTGTTCCAGAAA+AGG | - | chr8_3:10475924-10475943 | None:intergenic | 30.0% | |
| !!! | AGTATGTGGCTTTTTTCTAT+AGG | + | chr8_3:10476006-10476025 | Msa1276040:CDS | 30.0% |
| !!! | GTATGTGGCTTTTTTCTATA+GGG | + | chr8_3:10476007-10476026 | Msa1276040:CDS | 30.0% |
| ! | TTTTACCTTCACGGTTTTTG+AGG | - | chr8_3:10466374-10466393 | None:intergenic | 35.0% |
| CAAAAACCGTGAAGGTAAAA+AGG | + | chr8_3:10466374-10466393 | Msa1276040:intron | 35.0% | |
| ! | TGGTTTCCTTTTTACCTTCA+CGG | - | chr8_3:10466383-10466402 | None:intergenic | 35.0% |
| ATTGTACGATCAAATCAAGC+GGG | - | chr8_3:10466420-10466439 | None:intergenic | 35.0% | |
| GATTGTACGATCAAATCAAG+CGG | - | chr8_3:10466421-10466440 | None:intergenic | 35.0% | |
| ! | GTTAGTGATTATAGTTTGCC+AGG | + | chr8_3:10466511-10466530 | Msa1276040:intron | 35.0% |
| ! | TAGTGATTATAGTTTGCCAG+GGG | + | chr8_3:10466513-10466532 | Msa1276040:intron | 35.0% |
| ACAAATATATTTCCTTCCCC+TGG | - | chr8_3:10466532-10466551 | None:intergenic | 35.0% | |
| AGGGGAAGGAAATATATTTG+TGG | + | chr8_3:10466531-10466550 | Msa1276040:intron | 35.0% | |
| ACATGTAAGAGATACATGGT+TGG | - | chr8_3:10466566-10466585 | None:intergenic | 35.0% | |
| TAGGACATGTAAGAGATACA+TGG | - | chr8_3:10466570-10466589 | None:intergenic | 35.0% | |
| CCCTAATTAACCACTTCATT+TGG | + | chr8_3:10466591-10466610 | Msa1276040:intron | 35.0% | |
| GCCAAATGAAGTGGTTAATT+AGG | - | chr8_3:10466595-10466614 | None:intergenic | 35.0% | |
| CAAATACATGCCAAATGAAG+TGG | - | chr8_3:10466604-10466623 | None:intergenic | 35.0% | |
| TCATTTGGCATGTATTTGTG+TGG | + | chr8_3:10466606-10466625 | Msa1276040:intron | 35.0% | |
| AGTGATAGAAGAAGAGACAA+AGG | - | chr8_3:10467028-10467047 | None:intergenic | 35.0% | |
| ! | AGTGTAATTGGTTTAGGGAT+AGG | - | chr8_3:10467071-10467090 | None:intergenic | 35.0% |
| CAGAGAAAGATATGGTACAT+TGG | - | chr8_3:10467103-10467122 | None:intergenic | 35.0% | |
| CAGAGATACAGAGAAAGATA+TGG | - | chr8_3:10467111-10467130 | None:intergenic | 35.0% | |
| !! | TTGGTAATAGGTTTGCTATG+TGG | + | chr8_3:10467162-10467181 | Msa1276040:intron | 35.0% |
| !! | AAAAGCATCAACACAAAAGG+TGG | - | chr8_3:10467385-10467404 | None:intergenic | 35.0% |
| CCAAGCATATGCAATTAGTA+CGG | - | chr8_3:10467475-10467494 | None:intergenic | 35.0% | |
| !! | GCACCTTAGTGTTTTTATGT+GGG | - | chr8_3:10467787-10467806 | None:intergenic | 35.0% |
| !! | TGCACCTTAGTGTTTTTATG+TGG | - | chr8_3:10467788-10467807 | None:intergenic | 35.0% |
| ! | TACGAGAAACCGGATTTTAA+TGG | + | chr8_3:10468219-10468238 | Msa1276040:intron | 35.0% |
| ! | CGAGTTTTTCACAAGTGTTT+TGG | + | chr8_3:10468285-10468304 | Msa1276040:intron | 35.0% |
| !!! | TTTTCACAAGTGTTTTGGCT+TGG | + | chr8_3:10468290-10468309 | Msa1276040:intron | 35.0% |
| TAGCCAATAAAATCTCAACC+TGG | + | chr8_3:10468418-10468437 | Msa1276040:intron | 35.0% | |
| !! | TGATATCTAGCCTTTTGCTT+TGG | + | chr8_3:10468568-10468587 | Msa1276040:intron | 35.0% |
| TTAGAACAAGCCAAAGCAAA+AGG | - | chr8_3:10468581-10468600 | None:intergenic | 35.0% | |
| CAATACATATCTCACTTGAG+CGG | - | chr8_3:10468639-10468658 | None:intergenic | 35.0% | |
| !!! | TTCGCACAGGTCTTATTTTT+AGG | + | chr8_3:10468773-10468792 | Msa1276040:intron | 35.0% |
| TGTCAGTGATAAATGACCAA+TGG | + | chr8_3:10468822-10468841 | Msa1276040:intron | 35.0% | |
| GTCAGTGATAAATGACCAAT+GGG | + | chr8_3:10468823-10468842 | Msa1276040:intron | 35.0% | |
| ATAAATGACCAATGGGAAAC+AGG | + | chr8_3:10468830-10468849 | Msa1276040:intron | 35.0% | |
| TCATCAAACACAAATTACCC+TGG | - | chr8_3:10468881-10468900 | None:intergenic | 35.0% | |
| ! | AGGGTAATTTGTGTTTGATG+AGG | + | chr8_3:10468880-10468899 | Msa1276040:intron | 35.0% |
| GTGTTTGATGAGGAATTTGA+TGG | + | chr8_3:10468890-10468909 | Msa1276040:intron | 35.0% | |
| CCTTGACATTACACTTATAG+AGG | - | chr8_3:10468916-10468935 | None:intergenic | 35.0% | |
| CCTCTATAAGTGTAATGTCA+AGG | + | chr8_3:10468913-10468932 | Msa1276040:intron | 35.0% | |
| AAAGAGTTGTGACAAAATCC+TGG | + | chr8_3:10468936-10468955 | Msa1276040:intron | 35.0% | |
| AGTTGACTATAGTCCATCTA+GGG | - | chr8_3:10468967-10468986 | None:intergenic | 35.0% | |
| TAGTTGACTATAGTCCATCT+AGG | - | chr8_3:10468968-10468987 | None:intergenic | 35.0% | |
| TCCAAAGTGAAGACTATTTG+AGG | + | chr8_3:10469403-10469422 | Msa1276040:intron | 35.0% | |
| CCAAAGTGAAGACTATTTGA+GGG | + | chr8_3:10469404-10469423 | Msa1276040:intron | 35.0% | |
| GATTTACATTTACCTCTCCA+AGG | + | chr8_3:10469452-10469471 | Msa1276040:intron | 35.0% | |
| AAACACTTGAGAGTTGGATT+TGG | - | chr8_3:10469514-10469533 | None:intergenic | 35.0% | |
| CACTAAAAACACTTGAGAGT+TGG | - | chr8_3:10469520-10469539 | None:intergenic | 35.0% | |
| ATGTAAGTAGTTCAAGAGGT+TGG | - | chr8_3:10469548-10469567 | None:intergenic | 35.0% | |
| AACCTCTTGAACTACTTACA+TGG | + | chr8_3:10469547-10469566 | Msa1276040:intron | 35.0% | |
| AACCATGTAAGTAGTTCAAG+AGG | - | chr8_3:10469552-10469571 | None:intergenic | 35.0% | |
| GTTAGGCTAGTAAAAGAAAC+AGG | + | chr8_3:10469717-10469736 | Msa1276040:intron | 35.0% | |
| TCCAAGATTCAAATATGGGA+CGG | - | chr8_3:10470365-10470384 | None:intergenic | 35.0% | |
| AACTCTCCTTTGACTGAATA+TGG | - | chr8_3:10470400-10470419 | None:intergenic | 35.0% | |
| !! | GGTTTTATCTTCCATCGTAA+AGG | + | chr8_3:10470476-10470495 | Msa1276040:intron | 35.0% |
| GGTTTCATTATCCTTTACGA+TGG | - | chr8_3:10470490-10470509 | None:intergenic | 35.0% | |
| TCATAGTTAAAGATGAACCC+TGG | + | chr8_3:10470554-10470573 | Msa1276040:intron | 35.0% | |
| !!! | GAACCCTGGTGTTTTTTTTA+AGG | + | chr8_3:10470568-10470587 | Msa1276040:intron | 35.0% |
| CACCCTTAAAAAAAACACCA+GGG | - | chr8_3:10470574-10470593 | None:intergenic | 35.0% | |
| TCACCCTTAAAAAAAACACC+AGG | - | chr8_3:10470575-10470594 | None:intergenic | 35.0% | |
| ! | TGATGATGTGCATTCTAACA+AGG | + | chr8_3:10470812-10470831 | Msa1276040:intron | 35.0% |
| TTTACATAAAGTGGACGATG+TGG | + | chr8_3:10471077-10471096 | Msa1276040:intron | 35.0% | |
| GTTGACCTTTACTTTATGTG+TGG | + | chr8_3:10471292-10471311 | Msa1276040:intron | 35.0% | |
| AAGACCCACACATAAAGTAA+AGG | - | chr8_3:10471300-10471319 | None:intergenic | 35.0% | |
| ! | TCTCTCTCTTTCACTCATTT+TGG | + | chr8_3:10471462-10471481 | Msa1276040:intron | 35.0% |
| !! | TTTCACTCATTTTGGAGATG+TGG | + | chr8_3:10471470-10471489 | Msa1276040:intron | 35.0% |
| !! | CATTTTGGAGATGTGGTTTT+AGG | + | chr8_3:10471477-10471496 | Msa1276040:intron | 35.0% |
| AGAGAAAAAAAGGATGCAGA+GGG | - | chr8_3:10471523-10471542 | None:intergenic | 35.0% | |
| AAGAGAAAAAAAGGATGCAG+AGG | - | chr8_3:10471524-10471543 | None:intergenic | 35.0% | |
| ! | GTCGTTATATGCTATTGACT+TGG | + | chr8_3:10471771-10471790 | Msa1276040:intron | 35.0% |
| CAATAGAAATATACTCCCTC+CGG | + | chr8_3:10472242-10472261 | Msa1276040:intron | 35.0% | |
| ! | GAGTACGTTTTATGTGGTTT+TGG | + | chr8_3:10472398-10472417 | Msa1276040:intron | 35.0% |
| TCATAATAGGGTCGGAAAAA+CGG | + | chr8_3:10473090-10473109 | Msa1276040:intron | 35.0% | |
| !! | AATTAGTGGGTTAAACGTGT+CGG | - | chr8_3:10473131-10473150 | None:intergenic | 35.0% |
| AGAGAAAGGAAAAAGAGAGA+GGG | - | chr8_3:10473386-10473405 | None:intergenic | 35.0% | |
| !! | AGAAACTAGGATTTTGGTGA+CGG | - | chr8_3:10473419-10473438 | None:intergenic | 35.0% |
| ! | ACGAGAAGAAACTAGGATTT+TGG | - | chr8_3:10473425-10473444 | None:intergenic | 35.0% |
| AAGAGAAAAACGAGTTAGAG+TGG | - | chr8_3:10473497-10473516 | None:intergenic | 35.0% | |
| !! | CTAACTCGTTTTTCTCTTTC+TGG | + | chr8_3:10473499-10473518 | Msa1276040:intron | 35.0% |
| ! | CTGAAGATGCTATTTGGAAT+CGG | - | chr8_3:10473895-10473914 | None:intergenic | 35.0% |
| ! | ACTTTTACCCACAGACAAAT+AGG | + | chr8_3:10474209-10474228 | Msa1276040:intron | 35.0% |
| GTAAATGCCTATTTGTCTGT+GGG | - | chr8_3:10474219-10474238 | None:intergenic | 35.0% | |
| GACAAATAGGCATTTACCTA+TGG | + | chr8_3:10474222-10474241 | Msa1276040:intron | 35.0% | |
| AATTTATAGGAAGGGAAGGA+AGG | + | chr8_3:10474860-10474879 | Msa1276040:intron | 35.0% | |
| !!! | CACAAGAAGTTACTTTTTGC+TGG | - | chr8_3:10474964-10474983 | None:intergenic | 35.0% |
| ATTTACAAGGGAGTGAGTTA+TGG | - | chr8_3:10475000-10475019 | None:intergenic | 35.0% | |
| TGTTTGTGATTAAGGTGTGA+CGG | - | chr8_3:10475475-10475494 | None:intergenic | 35.0% | |
| ACAGACAATGAACAATCAAG+TGG | + | chr8_3:10475567-10475586 | Msa1276040:CDS | 35.0% | |
| AACAATCAAGTGGATAGTCA+TGG | + | chr8_3:10475577-10475596 | Msa1276040:CDS | 35.0% | |
| CAAAAACAAGAATGAGTGGT+TGG | + | chr8_3:10475684-10475703 | Msa1276040:CDS | 35.0% | |
| !! | AGCATGTTCTAAAGGTTATG+AGG | + | chr8_3:10475834-10475853 | Msa1276040:CDS | 35.0% |
| ATAGTCTTCAGGGTATACAA+TGG | - | chr8_3:10475893-10475912 | None:intergenic | 35.0% | |
| ! | ACTATTCTCACTTCCTTTTC+TGG | + | chr8_3:10475908-10475927 | Msa1276040:CDS | 35.0% |
| ! | GTTTTACTCTTGCTTATGAG+TGG | + | chr8_3:10475961-10475980 | Msa1276040:CDS | 35.0% |
| TGAGTCATAGGTTTAGTATG+TGG | + | chr8_3:10475992-10476011 | Msa1276040:CDS | 35.0% | |
| GATTTCCTCAAAAACCGTGA+AGG | + | chr8_3:10466366-10466385 | Msa1276040:CDS | 40.0% | |
| TGAAGTGGTTAATTAGGGCT+AGG | - | chr8_3:10466589-10466608 | None:intergenic | 40.0% | |
| !!! | CTGTACTCTTTTTTCCTTGC+TGG | + | chr8_3:10466677-10466696 | Msa1276040:intron | 40.0% |
| ! | TTTTATGCCGCTCTGTGTTT+TGG | + | chr8_3:10467342-10467361 | Msa1276040:intron | 40.0% |
| GCATATGCAATTAGTACGGT+GGG | - | chr8_3:10467471-10467490 | None:intergenic | 40.0% | |
| AGCATATGCAATTAGTACGG+TGG | - | chr8_3:10467472-10467491 | None:intergenic | 40.0% | |
| CCGTACTAATTGCATATGCT+TGG | + | chr8_3:10467472-10467491 | Msa1276040:intron | 40.0% | |
| GCACCCACATAAAAACACTA+AGG | + | chr8_3:10467781-10467800 | Msa1276040:intron | 40.0% | |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr8_3:10467974-10467993 | Msa1276040:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr8_3:10467975-10467994 | Msa1276040:intron | 40.0% |
| CAATAAAATCTCAACCTGGC+CGG | + | chr8_3:10468422-10468441 | Msa1276040:intron | 40.0% | |
| GAATACATGGTCAGTTTGTG+GGG | - | chr8_3:10468617-10468636 | None:intergenic | 40.0% | |
| GGAATACATGGTCAGTTTGT+GGG | - | chr8_3:10468618-10468637 | None:intergenic | 40.0% | |
| CGCTCAAGTGAGATATGTAT+TGG | + | chr8_3:10468637-10468656 | Msa1276040:intron | 40.0% | |
| ! | TAAAAGCACAAGATTCGCAC+AGG | + | chr8_3:10468760-10468779 | Msa1276040:intron | 40.0% |
| ! | TTTGATGACCTGTTTCCCAT+TGG | - | chr8_3:10468841-10468860 | None:intergenic | 40.0% |
| TGGGAAACAGGTCATCAAAA+AGG | + | chr8_3:10468842-10468861 | Msa1276040:intron | 40.0% | |
| !! | GTAGTAGGATTGGTTGTGTT+TGG | + | chr8_3:10469099-10469118 | Msa1276040:intron | 40.0% |
| AAACGAACATGACAATGCGA+TGG | - | chr8_3:10469177-10469196 | None:intergenic | 40.0% | |
| TATGACATCCTCTGCTTCTA+TGG | + | chr8_3:10469279-10469298 | Msa1276040:intron | 40.0% | |
| ATGACATCCTCTGCTTCTAT+GGG | + | chr8_3:10469280-10469299 | Msa1276040:intron | 40.0% | |
| CCCTCAAATAGTCTTCACTT+TGG | - | chr8_3:10469407-10469426 | None:intergenic | 40.0% | |
| AGAGTTGGATTTGGAAGTTC+CGG | - | chr8_3:10469505-10469524 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr8_3:10469898-10469917 | Msa1276040:intron | 40.0% | |
| GAGAGAAAAAGGAAGAGAGA+GGG | + | chr8_3:10469899-10469918 | Msa1276040:intron | 40.0% | |
| CAAGATTCAAATATGGGACG+GGG | - | chr8_3:10470363-10470382 | None:intergenic | 40.0% | |
| CCAAGATTCAAATATGGGAC+GGG | - | chr8_3:10470364-10470383 | None:intergenic | 40.0% | |
| CATCAAAGTTAGGGCAAGTT+TGG | + | chr8_3:10470424-10470443 | Msa1276040:intron | 40.0% | |
| ! | TAGTTTTTGTTGCCCTGGAA+AGG | + | chr8_3:10470601-10470620 | Msa1276040:intron | 40.0% |
| CTCAAATGGATCACAACTCT+GGG | + | chr8_3:10470747-10470766 | Msa1276040:intron | 40.0% | |
| AGGTGAAATCATTCGGAGTA+TGG | + | chr8_3:10470832-10470851 | Msa1276040:intron | 40.0% | |
| ACACTAATTGCTCCATAAGG+TGG | + | chr8_3:10471049-10471068 | Msa1276040:intron | 40.0% | |
| AGTGGACGATGTGGTATTTA+AGG | + | chr8_3:10471086-10471105 | Msa1276040:intron | 40.0% | |
| GTTTGTCAAAGGGAATTAGC+CGG | + | chr8_3:10471395-10471414 | Msa1276040:intron | 40.0% | |
| CTCAGACGATGAAATCACAA+AGG | - | chr8_3:10471606-10471625 | None:intergenic | 40.0% | |
| ATCTTGTTACGGTGTTCGTT+TGG | + | chr8_3:10471674-10471693 | Msa1276040:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_3:10472260-10472279 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_3:10472261-10472280 | None:intergenic | 40.0% | |
| TCTCAAGGTCATAATAGGGT+CGG | + | chr8_3:10473082-10473101 | Msa1276040:intron | 40.0% | |
| CATAATAGGGTCGGAAAAAC+GGG | + | chr8_3:10473091-10473110 | Msa1276040:intron | 40.0% | |
| CTCATTGAAGAAGTGACACA+TGG | + | chr8_3:10473177-10473196 | Msa1276040:intron | 40.0% | |
| TGAAGAAGTGACACATGGAT+AGG | + | chr8_3:10473182-10473201 | Msa1276040:intron | 40.0% | |
| GAAGAAGTGACACATGGATA+GGG | + | chr8_3:10473183-10473202 | Msa1276040:intron | 40.0% | |
| AAAAGAGAGAGGGGGTTAAT+AGG | - | chr8_3:10473376-10473395 | None:intergenic | 40.0% | |
| AGAAAGGAAAAAGAGAGAGG+GGG | - | chr8_3:10473384-10473403 | None:intergenic | 40.0% | |
| GAGAAAGGAAAAAGAGAGAG+GGG | - | chr8_3:10473385-10473404 | None:intergenic | 40.0% | |
| GAGAGAAAGGAAAAAGAGAG+AGG | - | chr8_3:10473387-10473406 | None:intergenic | 40.0% | |
| TGGATGAACGAGAAGAAACT+AGG | - | chr8_3:10473432-10473451 | None:intergenic | 40.0% | |
| TTCTCGTTCATCCACAATAG+AGG | + | chr8_3:10473438-10473457 | Msa1276040:intron | 40.0% | |
| TCTCGTTCATCCACAATAGA+GGG | + | chr8_3:10473439-10473458 | Msa1276040:intron | 40.0% | |
| CACAATAGAGGGGTGATTTA+GGG | + | chr8_3:10473450-10473469 | Msa1276040:intron | 40.0% | |
| ! | CGAGTTAGAGTGGTGATTTT+GGG | - | chr8_3:10473487-10473506 | None:intergenic | 40.0% |
| ! | ACGAGTTAGAGTGGTGATTT+TGG | - | chr8_3:10473488-10473507 | None:intergenic | 40.0% |
| TAAGTTGTGAGATAAGGGCA+TGG | - | chr8_3:10473802-10473821 | None:intergenic | 40.0% | |
| GCTCAACTGAAGATGCTATT+TGG | - | chr8_3:10473901-10473920 | None:intergenic | 40.0% | |
| GGTAAATGCCTATTTGTCTG+TGG | - | chr8_3:10474220-10474239 | None:intergenic | 40.0% | |
| !!! | TAGTGACGGATTTTTACCGT+AGG | + | chr8_3:10474310-10474329 | Msa1276040:intron | 40.0% |
| AATAAGTTTGGCACTCGTCA+AGG | + | chr8_3:10474741-10474760 | Msa1276040:intron | 40.0% | |
| TTAAGAAAGGAGAGCAGCAT+TGG | - | chr8_3:10474889-10474908 | None:intergenic | 40.0% | |
| ! | TCTTTGGTTCGTCATTGGTT+GGG | - | chr8_3:10475618-10475637 | None:intergenic | 40.0% |
| ! | TTCTTTGGTTCGTCATTGGT+TGG | - | chr8_3:10475619-10475638 | None:intergenic | 40.0% |
| ACCAATGACGAACCAAAGAA+AGG | + | chr8_3:10475619-10475638 | Msa1276040:CDS | 40.0% | |
| ! | ACCTTTCTTTGGTTCGTCAT+TGG | - | chr8_3:10475623-10475642 | None:intergenic | 40.0% |
| ATGACGAACCAAAGAAAGGT+TGG | + | chr8_3:10475623-10475642 | Msa1276040:CDS | 40.0% | |
| ACCAAAGAAAGGTTGGAGAA+AGG | + | chr8_3:10475630-10475649 | Msa1276040:CDS | 40.0% | |
| ACCTTTCTCCAACCTTTCTT+TGG | - | chr8_3:10475634-10475653 | None:intergenic | 40.0% | |
| AGTGGTTGGATCAAATGAGA+GGG | + | chr8_3:10475698-10475717 | Msa1276040:CDS | 40.0% | |
| GTTAGGCCTATTAAAGACGA+TGG | + | chr8_3:10475790-10475809 | Msa1276040:CDS | 40.0% | |
| GGAAGTGAGAATAGTCTTCA+GGG | - | chr8_3:10475903-10475922 | None:intergenic | 40.0% | |
| AGGAAGTGAGAATAGTCTTC+AGG | - | chr8_3:10475904-10475923 | None:intergenic | 40.0% | |
| GTGGTATTCGTTTGAGTCAT+AGG | + | chr8_3:10475980-10475999 | Msa1276040:CDS | 40.0% | |
| ATCATCCCAAACAGGATCTG+GGG | - | chr8_3:10466247-10466266 | None:intergenic | 45.0% | |
| CATCATCCCAAACAGGATCT+GGG | - | chr8_3:10466248-10466267 | None:intergenic | 45.0% | |
| AATCAAGCGGGTGCAATCAT+TGG | - | chr8_3:10466408-10466427 | None:intergenic | 45.0% | |
| ! | GATTATAGTTTGCCAGGGGA+AGG | + | chr8_3:10466517-10466536 | Msa1276040:intron | 45.0% |
| CTTGCTAGAAGAATCCAGCA+AGG | - | chr8_3:10466694-10466713 | None:intergenic | 45.0% | |
| CTTGCTGGATTCTTCTAGCA+AGG | + | chr8_3:10466692-10466711 | Msa1276040:intron | 45.0% | |
| TCAGTAGCCAAAACACAGAG+CGG | - | chr8_3:10467352-10467371 | None:intergenic | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | chr8_3:10467981-10468000 | None:intergenic | 45.0% | |
| !! | CGGCCAGGTTGAGATTTTAT+TGG | - | chr8_3:10468424-10468443 | None:intergenic | 45.0% |
| ACCAATCACCCCATGATTTC+CGG | - | chr8_3:10468444-10468463 | None:intergenic | 45.0% | |
| CGGAATACATGGTCAGTTTG+TGG | - | chr8_3:10468619-10468638 | None:intergenic | 45.0% | |
| TCTCACTTGAGCGGAATACA+TGG | - | chr8_3:10468630-10468649 | None:intergenic | 45.0% | |
| AATCCTGGAAGAACCCTAGA+TGG | + | chr8_3:10468951-10468970 | Msa1276040:intron | 45.0% | |
| GAGTTGGATTTGGAAGTTCC+GGG | - | chr8_3:10469504-10469523 | None:intergenic | 45.0% | |
| TCTACTAGCTAGGTGGTGTT+AGG | + | chr8_3:10469700-10469719 | Msa1276040:intron | 45.0% | |
| TTCAAATATGGGACGGGGAT+TGG | - | chr8_3:10470358-10470377 | None:intergenic | 45.0% | |
| CCCGTCCCATATTTGAATCT+TGG | + | chr8_3:10470361-10470380 | Msa1276040:intron | 45.0% | |
| CCAGGGCAACAAAAACTACA+TGG | - | chr8_3:10470599-10470618 | None:intergenic | 45.0% | |
| ! | CCATGTAGTTTTTGTTGCCC+TGG | + | chr8_3:10470596-10470615 | Msa1276040:intron | 45.0% |
| AAAGGCTTCTATGACTCCGT+CGG | + | chr8_3:10470696-10470715 | Msa1276040:intron | 45.0% | |
| TGAAACTTGGGGGATGCTTA+GGG | + | chr8_3:10470723-10470742 | Msa1276040:intron | 45.0% | |
| CCAGAGTTGTGATCCATTTG+AGG | - | chr8_3:10470749-10470768 | None:intergenic | 45.0% | |
| CCTCAAATGGATCACAACTC+TGG | + | chr8_3:10470746-10470765 | Msa1276040:intron | 45.0% | |
| AGGATGCAGAGGGTAATTCT+AGG | - | chr8_3:10471513-10471532 | None:intergenic | 45.0% | |
| CACATAAAACGTACTCCCTC+TGG | - | chr8_3:10472394-10472413 | None:intergenic | 45.0% | |
| !! | CAGAGGGAGTACGTTTTATG+TGG | + | chr8_3:10472392-10472411 | Msa1276040:intron | 45.0% |
| ACGGCTCACAAAAGAGAGAA+AGG | - | chr8_3:10473400-10473419 | None:intergenic | 45.0% | |
| CTCGTTCATCCACAATAGAG+GGG | + | chr8_3:10473440-10473459 | Msa1276040:intron | 45.0% | |
| CCTAAATCACCCCTCTATTG+TGG | - | chr8_3:10473452-10473471 | None:intergenic | 45.0% | |
| CCACAATAGAGGGGTGATTT+AGG | + | chr8_3:10473449-10473468 | Msa1276040:intron | 45.0% | |
| ! | TTGTGAGATAAGGGCATGGA+AGG | - | chr8_3:10473798-10473817 | None:intergenic | 45.0% |
| CCAAGATGTAGTGCGTACTT+CGG | - | chr8_3:10473863-10473882 | None:intergenic | 45.0% | |
| ! | ATGCTATTTGGAATCGGCTG+TGG | - | chr8_3:10473889-10473908 | None:intergenic | 45.0% |
| CTTAGAGGGGCCTCAAAATT+TGG | - | chr8_3:10474359-10474378 | None:intergenic | 45.0% | |
| ! | TTGAGGCCCCTCTAAGTTTT+AGG | + | chr8_3:10474363-10474382 | Msa1276040:intron | 45.0% |
| ACAGGGCCTAAAACTTAGAG+GGG | - | chr8_3:10474372-10474391 | None:intergenic | 45.0% | |
| CACAGGGCCTAAAACTTAGA+GGG | - | chr8_3:10474373-10474392 | None:intergenic | 45.0% | |
| CCACACATCGGAAAGAAACA+GGG | - | chr8_3:10474799-10474818 | None:intergenic | 45.0% | |
| ACCACACATCGGAAAGAAAC+AGG | - | chr8_3:10474800-10474819 | None:intergenic | 45.0% | |
| TTCTTTCCGATGTGTGGTGT+TGG | + | chr8_3:10474802-10474821 | Msa1276040:intron | 45.0% | |
| TCAACACCAACACCACACAT+CGG | - | chr8_3:10474811-10474830 | None:intergenic | 45.0% | |
| !! | GTGTGGTGTTGGTGTTGATT+TGG | + | chr8_3:10474813-10474832 | Msa1276040:intron | 45.0% |
| TACAAGGGAGTGAGTTATGG+TGG | - | chr8_3:10474997-10475016 | None:intergenic | 45.0% | |
| ! | CTTTGGTTCGTCATTGGTTG+GGG | - | chr8_3:10475617-10475636 | None:intergenic | 45.0% |
| GAGTGGTTGGATCAAATGAG+AGG | + | chr8_3:10475697-10475716 | Msa1276040:CDS | 45.0% | |
| CAAATGGCTATAAATCCGCC+CGG | + | chr8_3:10475763-10475782 | Msa1276040:CDS | 45.0% | |
| TTTAATAGGCCTAACGCCAC+CGG | - | chr8_3:10475785-10475804 | None:intergenic | 45.0% | |
| TGAGGACTTGAAGCTATGTC+CGG | + | chr8_3:10475852-10475871 | Msa1276040:CDS | 45.0% | |
| ATGGCTAAGACAGCATTACC+CGG | - | chr8_3:10475874-10475893 | None:intergenic | 45.0% | |
| !!! | AATTTGTTTTTTTTTTTAAT+AGG | + | chr8_3:10466886-10466905 | Msa1276040:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr8_3:10467748-10467767 | Msa1276040:intron | 5.0% |
| !!! | TAAACTTTATTTTAATTAAA+AGG | + | chr8_3:10467861-10467880 | Msa1276040:intron | 5.0% |
| !! | ATATATATATAATATATATG+AGG | - | chr8_3:10468014-10468033 | None:intergenic | 5.0% |
| !! | TAAAATATTCATTAAAATTA+AGG | + | chr8_3:10470180-10470199 | Msa1276040:intron | 5.0% |
| !!! | TGTATATAATTATTTATTTT+TGG | - | chr8_3:10470242-10470261 | None:intergenic | 5.0% |
| !!! | AATTTTCTTTTATTTTTTTA+AGG | + | chr8_3:10475035-10475054 | Msa1276040:intron | 5.0% |
| TGGTTACCCCAGATCCTGTT+TGG | + | chr8_3:10466238-10466257 | Msa1276040:CDS | 50.0% | |
| GGTTACCCCAGATCCTGTTT+GGG | + | chr8_3:10466239-10466258 | Msa1276040:CDS | 50.0% | |
| GCATCATCCCAAACAGGATC+TGG | - | chr8_3:10466249-10466268 | None:intergenic | 50.0% | |
| ! | TCCTGTTTGGGATGATGCTG+AGG | + | chr8_3:10466251-10466270 | Msa1276040:CDS | 50.0% |
| ! | CCTGTTTGGGATGATGCTGA+GGG | + | chr8_3:10466252-10466271 | Msa1276040:CDS | 50.0% |
| TCAACCTGGCCGGAAATCAT+GGG | + | chr8_3:10468432-10468451 | Msa1276040:intron | 50.0% | |
| ! | AGTCCATCTAGGGTTCTTCC+AGG | - | chr8_3:10468957-10468976 | None:intergenic | 50.0% |
| TGACATGCCCATAGAAGCAG+AGG | - | chr8_3:10469290-10469309 | None:intergenic | 50.0% | |
| GGTTGACAATGAGTTGCCCT+CGG | + | chr8_3:10469372-10469391 | Msa1276040:intron | 50.0% | |
| ACTTTGGACAGAGACACCGA+GGG | - | chr8_3:10469391-10469410 | None:intergenic | 50.0% | |
| TCCGTCGGAGAGTGAAACTT+GGG | + | chr8_3:10470711-10470730 | Msa1276040:intron | 50.0% | |
| GTGAAACTTGGGGGATGCTT+AGG | + | chr8_3:10470722-10470741 | Msa1276040:intron | 50.0% | |
| GAAAAACGGGTCACTTCCGT+TGG | + | chr8_3:10473104-10473123 | Msa1276040:intron | 50.0% | |
| ! | GGTTAAACGTGTCGGTCCAA+CGG | - | chr8_3:10473123-10473142 | None:intergenic | 50.0% |
| AGAGAGAGGGGGTTAATAGG+TGG | - | chr8_3:10473373-10473392 | None:intergenic | 50.0% | |
| TCGTCGTCTTAGTGCGACAT+TGG | + | chr8_3:10473573-10473592 | Msa1276040:intron | 50.0% | |
| CCGAAGTACGCACTACATCT+TGG | + | chr8_3:10473860-10473879 | Msa1276040:intron | 50.0% | |
| GCACAGGGCCTAAAACTTAG+AGG | - | chr8_3:10474374-10474393 | None:intergenic | 50.0% | |
| !!! | AAGTTTTAGGCCCTGTGCCA+AGG | + | chr8_3:10474376-10474395 | Msa1276040:intron | 50.0% |
| !!! | AGTTTTAGGCCCTGTGCCAA+GGG | + | chr8_3:10474377-10474396 | Msa1276040:intron | 50.0% |
| TTGATGCACTTGCACAGGAC+CGG | + | chr8_3:10474402-10474421 | Msa1276040:intron | 50.0% | |
| ! | TTGTGGAAGGGATGGTGGTA+CGG | - | chr8_3:10474767-10474786 | None:intergenic | 50.0% |
| ! | CCCTGTTTCTTTCCGATGTG+TGG | + | chr8_3:10474796-10474815 | Msa1276040:intron | 50.0% |
| ! | GGAGTGAGTTATGGTGGTGA+TGG | - | chr8_3:10474991-10475010 | None:intergenic | 50.0% |
| TTAATAGGCCTAACGCCACC+GGG | - | chr8_3:10475784-10475803 | None:intergenic | 50.0% | |
| GAGGACTTGAAGCTATGTCC+GGG | + | chr8_3:10475853-10475872 | Msa1276040:CDS | 50.0% | |
| TATCACCCCAGACAGGATCT+GGG | - | chr8_3:10476092-10476111 | None:intergenic | 50.0% | |
| TTATCACCCCAGACAGGATC+TGG | - | chr8_3:10476093-10476112 | None:intergenic | 50.0% | |
| ! | TCCTGTCTGGGGTGATAATG+AGG | + | chr8_3:10476095-10476114 | Msa1276040:CDS | 50.0% |
| ACCTCATTATCACCCCAGAC+AGG | - | chr8_3:10476099-10476118 | None:intergenic | 50.0% | |
| CCCTCAGCATCATCCCAAAC+AGG | - | chr8_3:10466255-10466274 | None:intergenic | 55.0% | |
| AGCGGGTGCAATCATTGGAG+TGG | - | chr8_3:10466403-10466422 | None:intergenic | 55.0% | |
| CTCAACCTGGCCGGAAATCA+TGG | + | chr8_3:10468431-10468450 | Msa1276040:intron | 55.0% | |
| CAACCTGGCCGGAAATCATG+GGG | + | chr8_3:10468433-10468452 | Msa1276040:intron | 55.0% | |
| GCCGGAAATCATGGGGTGAT+TGG | + | chr8_3:10468440-10468459 | Msa1276040:intron | 55.0% | |
| CACTTTGGACAGAGACACCG+AGG | - | chr8_3:10469392-10469411 | None:intergenic | 55.0% | |
| CTCCGTCGGAGAGTGAAACT+TGG | + | chr8_3:10470710-10470729 | Msa1276040:intron | 55.0% | |
| CCCCAAGTTTCACTCTCCGA+CGG | - | chr8_3:10470715-10470734 | None:intergenic | 55.0% | |
| CCGTCGGAGAGTGAAACTTG+GGG | + | chr8_3:10470712-10470731 | Msa1276040:intron | 55.0% | |
| CGTCGGAGAGTGAAACTTGG+GGG | + | chr8_3:10470713-10470732 | Msa1276040:intron | 55.0% | |
| GGGATGCTTAGGGCCTCAAA+TGG | + | chr8_3:10470733-10470752 | Msa1276040:intron | 55.0% | |
| TCACAACTCTGGGTCACCAG+AGG | + | chr8_3:10470757-10470776 | Msa1276040:intron | 55.0% | |
| CACAACTCTGGGTCACCAGA+GGG | + | chr8_3:10470758-10470777 | Msa1276040:intron | 55.0% | |
| GGGGACGGCCCTGTATATAA+AGG | - | chr8_3:10474121-10474140 | None:intergenic | 55.0% | |
| TAACGGGGCCTCCGAATTGT+CGG | - | chr8_3:10474142-10474161 | None:intergenic | 55.0% | |
| TGCAAGTGCATCAAGGCCCT+TGG | - | chr8_3:10474396-10474415 | None:intergenic | 55.0% | |
| GGTCCTGTGCAAGTGCATCA+AGG | - | chr8_3:10474403-10474422 | None:intergenic | 55.0% | |
| CAGAGTTGTGGAAGGGATGG+TGG | - | chr8_3:10474772-10474791 | None:intergenic | 55.0% | |
| CACCATCCCTTCCACAACTC+TGG | + | chr8_3:10474770-10474789 | Msa1276040:intron | 55.0% | |
| AAACAGGGTCGCCAGAGTTG+TGG | - | chr8_3:10474784-10474803 | None:intergenic | 55.0% | |
| ATGGCTATAAATCCGCCCGG+TGG | + | chr8_3:10475766-10475785 | Msa1276040:CDS | 55.0% | |
| TGGTTACCCCAGATCCTGTC+TGG | + | chr8_3:10476082-10476101 | Msa1276040:CDS | 55.0% | |
| GGTTACCCCAGATCCTGTCT+GGG | + | chr8_3:10476083-10476102 | Msa1276040:CDS | 55.0% | |
| GTTACCCCAGATCCTGTCTG+GGG | + | chr8_3:10476084-10476103 | Msa1276040:CDS | 55.0% | |
| ATCACCCCAGACAGGATCTG+GGG | - | chr8_3:10476091-10476110 | None:intergenic | 55.0% | |
| TCACCCCATGATTTCCGGCC+AGG | - | chr8_3:10468439-10468458 | None:intergenic | 60.0% | |
| AACGGGGCCTCCGAATTGTC+GGG | - | chr8_3:10474141-10474160 | None:intergenic | 60.0% | |
| GCATCAAGGCCCTTGGCACA+GGG | - | chr8_3:10474389-10474408 | None:intergenic | 60.0% | |
| TGCATCAAGGCCCTTGGCAC+AGG | - | chr8_3:10474390-10474409 | None:intergenic | 60.0% | |
| GGGCCTTGATGCACTTGCAC+AGG | + | chr8_3:10474397-10474416 | Msa1276040:intron | 60.0% | |
| CGCCAGAGTTGTGGAAGGGA+TGG | - | chr8_3:10474775-10474794 | None:intergenic | 60.0% | |
| GGGTCGCCAGAGTTGTGGAA+GGG | - | chr8_3:10474779-10474798 | None:intergenic | 60.0% | |
| AGGGTCGCCAGAGTTGTGGA+AGG | - | chr8_3:10474780-10474799 | None:intergenic | 60.0% | |
| TAAATCCGCCCGGTGGCGTT+AGG | + | chr8_3:10475773-10475792 | Msa1276040:CDS | 60.0% | |
| CAGGGCCGTCCCCGACAATT+CGG | + | chr8_3:10474128-10474147 | Msa1276040:intron | 65.0% | |
| GGCCTCCGAATTGTCGGGGA+CGG | - | chr8_3:10474136-10474155 | None:intergenic | 65.0% | |
| ACGGGGCCTCCGAATTGTCG+GGG | - | chr8_3:10474140-10474159 | None:intergenic | 65.0% | |
| ATAGGCCTAACGCCACCGGG+CGG | - | chr8_3:10475781-10475800 | None:intergenic | 65.0% | |
| GGCCGTCCCCGACAATTCGG+AGG | + | chr8_3:10474131-10474150 | Msa1276040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 10466180 | 10476146 | 10466180 | ID=Msa1276040;Name=Msa1276040 |
| chr8_3 | mRNA | 10466180 | 10476146 | 10466180 | ID=Msa1276040-mRNA-1;Parent=Msa1276040;Name=Msa1276040-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0.5|2|0|262 |
| chr8_3 | exon | 10466180 | 10466387 | 10466180 | ID=Msa1276040-mRNA-1:exon:4354;Parent=Msa1276040-mRNA-1 |
| chr8_3 | exon | 10475566 | 10476146 | 10475566 | ID=Msa1276040-mRNA-1:exon:4355;Parent=Msa1276040-mRNA-1 |
| chr8_3 | CDS | 10466180 | 10466387 | 10466180 | ID=Msa1276040-mRNA-1:cds;Parent=Msa1276040-mRNA-1 |
| chr8_3 | CDS | 10475566 | 10476146 | 10475566 | ID=Msa1276040-mRNA-1:cds;Parent=Msa1276040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
