Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957960 | G8A101 | 52.222 | 270 | 122 | 1 | 3 | 265 | 4 | 273 | 1.51e-99 | 301 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014330 | Msa0957960 | 0.808154 | 3.560512e-50 | -8.615850e-47 |
| Msa0015750 | Msa0957960 | 0.804123 | 2.512516e-49 | -8.615850e-47 |
| Msa0016570 | Msa0957960 | 0.816019 | 6.861014e-52 | -8.615850e-47 |
| Msa0023610 | Msa0957960 | 0.821701 | 3.510015e-53 | -8.615850e-47 |
| Msa0111510 | Msa0957960 | 0.806325 | 8.690957e-50 | -8.615850e-47 |
| Msa0118060 | Msa0957960 | 0.824002 | 1.022001e-53 | -8.615850e-47 |
| Msa0604350 | Msa0957960 | 0.805727 | 1.160688e-49 | -8.615850e-47 |
| Msa0636170 | Msa0957960 | 0.831810 | 1.351340e-55 | -8.615850e-47 |
| Msa0639610 | Msa0957960 | 0.808201 | 3.479905e-50 | -8.615850e-47 |
| Msa0661870 | Msa0957960 | 0.805210 | 1.490366e-49 | -8.615850e-47 |
| Msa0694370 | Msa0957960 | 0.820098 | 8.206085e-53 | -8.615850e-47 |
| Msa0726140 | Msa0957960 | 0.852341 | 4.919318e-61 | -8.615850e-47 |
| Msa0732540 | Msa0957960 | 0.804286 | 2.323536e-49 | -8.615850e-47 |
| Msa0735080 | Msa0957960 | 0.824635 | 7.255338e-54 | -8.615850e-47 |
| Msa0743810 | Msa0957960 | 0.857093 | 2.063899e-62 | -8.615850e-47 |
| Msa0745060 | Msa0957960 | 0.852926 | 3.349330e-61 | -8.615850e-47 |
| Msa0777870 | Msa0957960 | 0.822058 | 2.902224e-53 | -8.615850e-47 |
| Msa0783160 | Msa0957960 | 0.815817 | 7.611810e-52 | -8.615850e-47 |
| Msa0784290 | Msa0957960 | 0.830498 | 2.838785e-55 | -8.615850e-47 |
| Msa0825860 | Msa0957960 | 0.862038 | 6.724259e-64 | -8.615850e-47 |
| Msa0123810 | Msa0957960 | 0.837774 | 4.262022e-57 | -8.615850e-47 |
| Msa0145750 | Msa0957960 | 0.814670 | 1.368745e-51 | -8.615850e-47 |
| Msa0153200 | Msa0957960 | 0.812073 | 5.093815e-51 | -8.615850e-47 |
| Msa0232850 | Msa0957960 | 0.868338 | 7.032901e-66 | -8.615850e-47 |
| Msa0365500 | Msa0957960 | 0.831380 | 1.724703e-55 | -8.615850e-47 |
| Msa0384800 | Msa0957960 | 0.839167 | 1.862811e-57 | -8.615850e-47 |
| Msa0414420 | Msa0957960 | 0.818415 | 1.983918e-52 | -8.615850e-47 |
| Msa0423020 | Msa0957960 | 0.812891 | 3.373739e-51 | -8.615850e-47 |
| Msa0435230 | Msa0957960 | 0.818536 | 1.862523e-52 | -8.615850e-47 |
| Msa0451730 | Msa0957960 | 0.809039 | 2.304555e-50 | -8.615850e-47 |
| Msa0452900 | Msa0957960 | 0.844185 | 8.839958e-59 | -8.615850e-47 |
| Msa0453120 | Msa0957960 | 0.814827 | 1.263485e-51 | -8.615850e-47 |
| Msa0454910 | Msa0957960 | 0.827589 | 1.439171e-54 | -8.615850e-47 |
| Msa0479340 | Msa0957960 | 0.803083 | 4.128639e-49 | -8.615850e-47 |
| Msa0251320 | Msa0957960 | 0.801485 | 8.804919e-49 | -8.615850e-47 |
| Msa0267000 | Msa0957960 | 0.823351 | 1.451150e-53 | -8.615850e-47 |
| Msa0267010 | Msa0957960 | 0.826443 | 2.705922e-54 | -8.615850e-47 |
| Msa0306460 | Msa0957960 | 0.802135 | 6.477411e-49 | -8.615850e-47 |
| Msa0311750 | Msa0957960 | 0.807313 | 5.372142e-50 | -8.615850e-47 |
| Msa0342240 | Msa0957960 | 0.803770 | 2.975052e-49 | -8.615850e-47 |
| Msa0360510 | Msa0957960 | 0.801252 | 9.830792e-49 | -8.615850e-47 |
| Msa0491590 | Msa0957960 | 0.820954 | 5.220186e-53 | -8.615850e-47 |
| Msa0502760 | Msa0957960 | 0.821743 | 3.432897e-53 | -8.615850e-47 |
| Msa0506270 | Msa0957960 | 0.821446 | 4.021112e-53 | -8.615850e-47 |
| Msa0548060 | Msa0957960 | 0.808389 | 3.171860e-50 | -8.615850e-47 |
| Msa0596150 | Msa0957960 | 0.807715 | 4.415584e-50 | -8.615850e-47 |
| Msa0846210 | Msa0957960 | 0.803063 | 4.169195e-49 | -8.615850e-47 |
| Msa0846330 | Msa0957960 | 0.842700 | 2.203110e-58 | -8.615850e-47 |
| Msa0846350 | Msa0957960 | 0.834204 | 3.430185e-56 | -8.615850e-47 |
| Msa0854980 | Msa0957960 | 0.834597 | 2.733512e-56 | -8.615850e-47 |
| Msa0865320 | Msa0957960 | 0.847226 | 1.322436e-59 | -8.615850e-47 |
| Msa0885290 | Msa0957960 | 0.802405 | 5.697341e-49 | -8.615850e-47 |
| Msa0888370 | Msa0957960 | 0.809376 | 1.950935e-50 | -8.615850e-47 |
| Msa0898380 | Msa0957960 | 0.828310 | 9.652716e-55 | -8.615850e-47 |
| Msa0907260 | Msa0957960 | 0.802236 | 6.173647e-49 | -8.615850e-47 |
| Msa0954910 | Msa0957960 | 0.821710 | 3.492667e-53 | -8.615850e-47 |
| Msa0956270 | Msa0957960 | 0.805415 | 1.349487e-49 | -8.615850e-47 |
| Msa0957860 | Msa0957960 | 0.999721 | 0.000000e+00 | -8.615850e-47 |
| Msa0957960 | Msa0979410 | 0.821575 | 3.754234e-53 | -8.615850e-47 |
| Msa0957960 | Msa0986360 | 0.814932 | 1.197824e-51 | -8.615850e-47 |
| Msa0957960 | Msa0989060 | 0.858061 | 1.066829e-62 | -8.615850e-47 |
| Msa0957960 | Msa1002310 | 0.826779 | 2.249865e-54 | -8.615850e-47 |
| Msa0957960 | Msa1016280 | 0.828866 | 7.082606e-55 | -8.615850e-47 |
| Msa0957960 | Msa1024240 | 0.809908 | 1.499523e-50 | -8.615850e-47 |
| Msa0957960 | Msa1025360 | 0.832128 | 1.127835e-55 | -8.615850e-47 |
| Msa0957960 | Msa1025370 | 0.832814 | 7.626208e-56 | -8.615850e-47 |
| Msa0957960 | Msa1044830 | 0.829290 | 5.590372e-55 | -8.615850e-47 |
| Msa0957960 | Msa1044840 | 0.834128 | 3.584162e-56 | -8.615850e-47 |
| Msa0957960 | Msa1054790 | 0.805387 | 1.368274e-49 | -8.615850e-47 |
| Msa0957960 | Msa1092990 | 0.878049 | 3.845046e-69 | -8.615850e-47 |
| Msa0957960 | Msa1100980 | 0.858575 | 7.496450e-63 | -8.615850e-47 |
| Msa0957960 | Msa1109440 | 0.806074 | 9.813167e-50 | -8.615850e-47 |
| Msa0957960 | Msa1135740 | 0.839142 | 1.891473e-57 | -8.615850e-47 |
| Msa0957960 | Msa1136090 | 0.833503 | 5.136426e-56 | -8.615850e-47 |
| Msa0957960 | Msa1137690 | 0.804474 | 2.123300e-49 | -8.615850e-47 |
| Msa0957960 | Msa1146110 | 0.810871 | 9.289952e-51 | -8.615850e-47 |
| Msa0957960 | Msa1173920 | 0.805817 | 1.111350e-49 | -8.615850e-47 |
| Msa0957960 | Msa1178340 | 0.808115 | 3.629505e-50 | -8.615850e-47 |
| Msa0957960 | Msa1182090 | 0.821628 | 3.649333e-53 | -8.615850e-47 |
| Msa0957960 | Msa1187940 | 0.821590 | 3.724589e-53 | -8.615850e-47 |
| Msa0957960 | Msa1187950 | 0.863673 | 2.104569e-64 | -8.615850e-47 |
| Msa0957960 | Msa1192640 | 0.805643 | 1.208893e-49 | -8.615850e-47 |
| Msa0957960 | Msa1246880 | 0.834161 | 3.516484e-56 | -8.615850e-47 |
| Msa0957960 | Msa1269670 | 0.854614 | 1.094965e-61 | -8.615850e-47 |
| Msa0957960 | Msa1270230 | 0.823501 | 1.338651e-53 | -8.615850e-47 |
| Msa0957960 | Msa1270240 | 0.849174 | 3.831027e-60 | -8.615850e-47 |
| Msa0957960 | Msa1270270 | 0.834838 | 2.378034e-56 | -8.615850e-47 |
| Msa0957960 | Msa1273230 | 0.834368 | 3.121712e-56 | -8.615850e-47 |
| Msa0957960 | Msa1276040 | 0.810767 | 9.785658e-51 | -8.615850e-47 |
| Msa0957960 | Msa1283330 | 0.860052 | 2.702425e-63 | -8.615850e-47 |
| Msa0957960 | Msa1285930 | 0.827838 | 1.254179e-54 | -8.615850e-47 |
| Msa0957960 | Msa1287800 | 0.823999 | 1.023396e-53 | -8.615850e-47 |
| Msa0957960 | Msa1287810 | 0.834381 | 3.096924e-56 | -8.615850e-47 |
| Msa0957960 | Msa1297210 | 0.807612 | 4.642816e-50 | -8.615850e-47 |
| Msa0957960 | Msa1314280 | 0.800030 | 1.744407e-48 | -8.615850e-47 |
| Msa0957960 | Msa1340590 | 0.805206 | 1.493094e-49 | -8.615850e-47 |
| Msa0957960 | Msa1342200 | 0.805859 | 1.089065e-49 | -8.615850e-47 |
| Msa0957960 | Msa1369430 | 0.809231 | 2.096240e-50 | -8.615850e-47 |
| Msa0957960 | Msa1386330 | 0.943025 | 2.526231e-102 | -8.615850e-47 |
| Msa0957960 | Msa1397580 | 0.804711 | 1.894254e-49 | -8.615850e-47 |
| Msa0957960 | Msa1402790 | 0.813583 | 2.378566e-51 | -8.615850e-47 |
| Msa0957960 | Msa1404000 | 0.866407 | 2.917270e-65 | -8.615850e-47 |
| Msa0957960 | Msa1415310 | 0.824582 | 7.465933e-54 | -8.615850e-47 |
| Msa0957960 | Msa1422180 | 0.843483 | 1.363040e-58 | -8.615850e-47 |
| Msa0957960 | Msa1433120 | 0.826245 | 3.015291e-54 | -8.615850e-47 |
| Msa0957960 | Msa1463140 | 0.824921 | 6.212057e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957960 | MtrunA17_Chr1g0206471 | 52.222 | 270 | 122 | 1 | 3 | 265 | 4 | 273 | 2.90e-103 | 301 |
| Msa0957960 | MtrunA17_Chr7g0270401 | 47.985 | 273 | 135 | 1 | 1 | 266 | 1 | 273 | 7.14e-93 | 275 |
| Msa0957960 | MtrunA17_Chr1g0193281 | 40.722 | 194 | 88 | 3 | 1 | 180 | 1 | 181 | 1.53e-44 | 149 |
| Msa0957960 | MtrunA17_Chr7g0228461 | 55.556 | 117 | 51 | 1 | 46 | 161 | 1 | 117 | 4.74e-39 | 134 |
| Msa0957960 | MtrunA17_Chr1g0207921 | 48.077 | 104 | 45 | 1 | 16 | 110 | 13 | 116 | 1.57e-28 | 107 |
| Msa0957960 | MtrunA17_Chr1g0207921 | 34.821 | 112 | 68 | 1 | 158 | 264 | 86 | 197 | 2.02e-15 | 72.8 |
| Msa0957960 | MtrunA17_Chr8g0359311 | 54.762 | 84 | 38 | 0 | 183 | 266 | 17 | 100 | 5.00e-28 | 103 |
| Msa0957960 | MtrunA17_Chr3g0123031 | 45.370 | 108 | 41 | 2 | 158 | 265 | 1 | 90 | 1.30e-24 | 94.4 |
| Msa0957960 | MtrunA17_Chr7g0234161 | 46.392 | 97 | 52 | 0 | 134 | 230 | 27 | 123 | 4.20e-22 | 88.6 |
| Msa0957960 | MtrunA17_Chr6g0473661 | 27.723 | 202 | 131 | 3 | 47 | 246 | 259 | 447 | 1.88e-20 | 90.5 |
| Msa0957960 | MtrunA17_Chr8g0361581 | 40.000 | 85 | 44 | 1 | 1 | 78 | 1 | 85 | 5.52e-17 | 76.3 |
| Msa0957960 | MtrunA17_Chr8g0361581 | 38.272 | 81 | 50 | 0 | 184 | 264 | 88 | 168 | 1.83e-15 | 72.4 |
| Msa0957960 | MtrunA17_Chr7g0237161 | 40.741 | 81 | 48 | 0 | 166 | 246 | 3 | 83 | 2.12e-15 | 69.7 |
| Msa0957960 | MtrunA17_Chr5g0421721 | 39.130 | 92 | 49 | 1 | 1 | 85 | 1 | 92 | 2.86e-14 | 67.0 |
| Msa0957960 | MtrunA17_Chr5g0423431 | 37.179 | 78 | 42 | 1 | 1 | 71 | 1 | 78 | 1.77e-13 | 64.3 |
| Msa0957960 | MtrunA17_Chr1g0178231 | 37.179 | 78 | 49 | 0 | 184 | 261 | 17 | 94 | 1.05e-12 | 63.9 |
| Msa0957960 | MtrunA17_Chr6g0456161 | 55.102 | 49 | 22 | 0 | 203 | 251 | 1 | 49 | 1.75e-12 | 60.8 |
| Msa0957960 | MtrunA17_Chr6g0473651 | 27.389 | 157 | 95 | 3 | 97 | 246 | 18 | 162 | 2.95e-12 | 65.9 |
| Msa0957960 | MtrunA17_Chr1g0151111 | 36.709 | 79 | 50 | 0 | 183 | 261 | 17 | 95 | 6.69e-12 | 62.4 |
| Msa0957960 | MtrunA17_Chr4g0054601 | 32.468 | 77 | 52 | 0 | 65 | 141 | 9 | 85 | 8.69e-12 | 60.8 |
| Msa0957960 | MtrunA17_Chr4g0004891 | 70.270 | 37 | 11 | 0 | 45 | 81 | 2 | 38 | 3.50e-11 | 57.4 |
| Msa0957960 | MtrunA17_Chr2g0314281 | 57.447 | 47 | 20 | 0 | 205 | 251 | 367 | 413 | 9.60e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATACTTCGAAGGAATTA+TGG | 0.223973 | 6_3:+70300728 | None:intergenic |
| GTTGCGGTTTAGGACGTTTA+TGG | 0.225713 | 6_3:-70300934 | Msa0957960:intron |
| TTGATGAATGTGGTTGTATA+TGG | 0.268575 | 6_3:-70300239 | Msa0957960:CDS |
| ACCAAAGTCGTAAGCAAAAT+TGG | 0.280462 | 6_3:+70300789 | None:intergenic |
| ATGCAGGATTTGGCTCATAT+TGG | 0.281266 | 6_3:-70300309 | Msa0957960:intron |
| GACTTTGTAGAGATCGATTC+TGG | 0.282449 | 6_3:-70300418 | Msa0957960:CDS |
| ACATTAGTATTTGTTGGAAA+TGG | 0.291674 | 6_3:-70300619 | Msa0957960:CDS |
| ACAGGCTAAAGTTGCGGTTT+AGG | 0.323474 | 6_3:-70300944 | Msa0957960:CDS |
| TCAATATCCGTGTCAGAAAT+AGG | 0.332599 | 6_3:-70300591 | Msa0957960:CDS |
| TGGATAACATTAGTATTTGT+TGG | 0.352039 | 6_3:-70300625 | Msa0957960:CDS |
| CATTAGTATTTGTTGGAAAT+GGG | 0.358285 | 6_3:-70300618 | Msa0957960:CDS |
| TGCAGGATTTGGCTCATATT+GGG | 0.361232 | 6_3:-70300308 | Msa0957960:intron |
| GGTCAAGGCTAGAAGGTTAA+AGG | 0.364042 | 6_3:-70300148 | Msa0957960:CDS |
| TTCTCATTGACACCGATATA+TGG | 0.377396 | 6_3:+70300099 | None:intergenic |
| CCATAATTCCTTCGAAGTAT+TGG | 0.379208 | 6_3:-70300728 | Msa0957960:CDS |
| GACGGTGACAGTGTCGTTAT+CGG | 0.398058 | 6_3:-70300126 | Msa0957960:CDS |
| CTCCTTTCCATTTCACCCAC+AGG | 0.398454 | 6_3:+70300972 | None:intergenic |
| TGCACAAATGGCACAGGAAA+AGG | 0.399613 | 6_3:+70300481 | None:intergenic |
| CTCGCACACAATCTTCTTGC+TGG | 0.401085 | 6_3:-70301113 | Msa0957960:intron |
| GTTATCGGTGCTCCATATAT+CGG | 0.401878 | 6_3:-70300111 | Msa0957960:CDS |
| CCTCATGCTCACTTTAAGAT+TGG | 0.409855 | 6_3:-70300189 | Msa0957960:CDS |
| AGATTGGCGGTGGCTGGAAC+AGG | 0.416190 | 6_3:-70300173 | Msa0957960:CDS |
| ACTTTAAGATTGGCGGTGGC+TGG | 0.418939 | 6_3:-70300179 | Msa0957960:CDS |
| TGAAACTGAGAATCTGAGTT+TGG | 0.418987 | 6_3:-70300262 | Msa0957960:CDS |
| ACATAATCCTGTGGGTGAAA+TGG | 0.425158 | 6_3:-70300979 | Msa0957960:CDS |
| TTAAATTCATTATGCACAAA+TGG | 0.431684 | 6_3:+70300469 | None:intergenic |
| AGAGATCGATTCTGGAATCT+TGG | 0.440229 | 6_3:-70300410 | Msa0957960:intron |
| CATGAGGGCGTGTAACAAAC+TGG | 0.441451 | 6_3:+70300205 | None:intergenic |
| ACAGGATGGTCAAGGCTAGA+AGG | 0.443921 | 6_3:-70300155 | Msa0957960:CDS |
| ACGCAATGCAAGCCAGCCTT+TGG | 0.460560 | 6_3:+70300675 | None:intergenic |
| ACTTTGGTGATAGTGTTGAT+AGG | 0.462057 | 6_3:-70300774 | Msa0957960:CDS |
| CATGCTCACTTTAAGATTGG+CGG | 0.482279 | 6_3:-70300186 | Msa0957960:CDS |
| CTGAGTTTGGTTGATGAATG+TGG | 0.483514 | 6_3:-70300249 | Msa0957960:CDS |
| ACCCACAGGATTATGTATCA+AGG | 0.484056 | 6_3:+70300986 | None:intergenic |
| TGATGAATGTGGTTGTATAT+GGG | 0.484155 | 6_3:-70300238 | Msa0957960:CDS |
| TCAGAAATAGGTTGGGTAAG+AGG | 0.500139 | 6_3:-70300579 | Msa0957960:CDS |
| TTGCATAGGAGGTGTGAACC+TGG | 0.509205 | 6_3:+70300546 | None:intergenic |
| TATCCGTGTCAGAAATAGGT+TGG | 0.517230 | 6_3:-70300587 | Msa0957960:CDS |
| AAATGGAAAGGAGAGCCAAC+AGG | 0.528770 | 6_3:-70300962 | Msa0957960:CDS |
| ATCCGTGTCAGAAATAGGTT+GGG | 0.528825 | 6_3:-70300586 | Msa0957960:CDS |
| GACTTGTATAACGCATCACT+TGG | 0.536646 | 6_3:-70300652 | Msa0957960:CDS |
| AAACCGCAACTTTAGCCTGT+TGG | 0.558470 | 6_3:+70300947 | None:intergenic |
| ATCCTGTGGGTGAAATGGAA+AGG | 0.566847 | 6_3:-70300974 | Msa0957960:CDS |
| GCTCACTTTAAGATTGGCGG+TGG | 0.568885 | 6_3:-70300183 | Msa0957960:CDS |
| AAGAAGATTGTGTGCGAGCA+TGG | 0.571428 | 6_3:+70301118 | None:intergenic |
| TCTCTCTACCAATACTTCGA+AGG | 0.574251 | 6_3:+70300720 | None:intergenic |
| CCAATCTTAAAGTGAGCATG+AGG | 0.578221 | 6_3:+70300189 | None:intergenic |
| ATTGGTAGAGAGAAACAACC+AGG | 0.580535 | 6_3:-70300710 | Msa0957960:CDS |
| ATAACGCATCACTTGGTGCA+TGG | 0.587916 | 6_3:-70300645 | Msa0957960:CDS |
| CTCTCAACAGCGAATTGCAT+AGG | 0.590485 | 6_3:+70300532 | None:intergenic |
| TAGTATTTGTTGGAAATGGG+AGG | 0.592775 | 6_3:-70300615 | Msa0957960:CDS |
| ACCCTTGATACATAATCCTG+TGG | 0.598049 | 6_3:-70300988 | Msa0957960:CDS |
| CCCACAGGATTATGTATCAA+GGG | 0.598540 | 6_3:+70300987 | None:intergenic |
| TCATTATGCACAAATGGCAC+AGG | 0.601819 | 6_3:+70300475 | None:intergenic |
| CTATGCAATTCGCTGTTGAG+AGG | 0.602851 | 6_3:-70300531 | Msa0957960:CDS |
| TGCATAGGAGGTGTGAACCT+GGG | 0.603224 | 6_3:+70300547 | None:intergenic |
| GAGCCAACAGGCTAAAGTTG+CGG | 0.603827 | 6_3:-70300950 | Msa0957960:CDS |
| TACCCAACCTATTTCTGACA+CGG | 0.609870 | 6_3:+70300584 | None:intergenic |
| TCAACAGCGAATTGCATAGG+AGG | 0.614378 | 6_3:+70300535 | None:intergenic |
| TGTTGATAGGTATGCTACAT+TGG | 0.616810 | 6_3:-70300761 | Msa0957960:CDS |
| CCCTTGATACATAATCCTGT+GGG | 0.621495 | 6_3:-70300987 | Msa0957960:CDS |
| GTAAGAGGATACGATGTCCC+AGG | 0.623787 | 6_3:-70300564 | Msa0957960:CDS |
| AAGTCGTAAGCAAAATTGGT+TGG | 0.627128 | 6_3:+70300793 | None:intergenic |
| TGGCGGTGGCTGGAACAGGA+TGG | 0.649155 | 6_3:-70300169 | Msa0957960:CDS |
| TGATAGGTATGCTACATTGG+TGG | 0.670079 | 6_3:-70300758 | Msa0957960:CDS |
| TGGCTGGAACAGGATGGTCA+AGG | 0.676417 | 6_3:-70300163 | Msa0957960:CDS |
| AGGGCGTGTAACAAACTGGA+GGG | 0.676724 | 6_3:+70300209 | None:intergenic |
| CAATCTTAAAGTGAGCATGA+GGG | 0.680650 | 6_3:+70300190 | None:intergenic |
| AAGGCTAGAAGGTTAAAGGA+CGG | 0.693112 | 6_3:-70300144 | Msa0957960:CDS |
| GAGGGCGTGTAACAAACTGG+AGG | 0.699235 | 6_3:+70300208 | None:intergenic |
| TTGGTAGAGAGAAACAACCA+GGG | 0.738238 | 6_3:-70300709 | Msa0957960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCAAAAATACATGTAA+GGG | + | chr6_3:70300163-70300182 | None:intergenic | 15.0% |
| !! | TAAATCAAAAATACATGTAA+GGG | + | chr6_3:70300163-70300182 | None:intergenic | 15.0% |
| !! | AAATCAAAAATACATGTAAG+GGG | + | chr6_3:70300162-70300181 | None:intergenic | 20.0% |
| !! | CTAAATCAAAAATACATGTA+AGG | + | chr6_3:70300164-70300183 | None:intergenic | 20.0% |
| !! | TTAAATTCATTATGCACAAA+TGG | + | chr6_3:70300745-70300764 | None:intergenic | 20.0% |
| !!! | TGTTAAAAAAGATATTGACT+TGG | - | chr6_3:70300835-70300854 | Msa0957960:intron | 20.0% |
| !!! | ATATGATGTTTTAATTATGC+AGG | - | chr6_3:70300886-70300905 | Msa0957960:intron | 20.0% |
| !! | AAATCAAAAATACATGTAAG+GGG | + | chr6_3:70300162-70300181 | None:intergenic | 20.0% |
| !! | CTAAATCAAAAATACATGTA+AGG | + | chr6_3:70300164-70300183 | None:intergenic | 20.0% |
| !! | TTAAATTCATTATGCACAAA+TGG | + | chr6_3:70300745-70300764 | None:intergenic | 20.0% |
| !!! | TGTTAAAAAAGATATTGACT+TGG | - | chr6_3:70300835-70300854 | Msa0957960:intron | 20.0% |
| !!! | ATATGATGTTTTAATTATGC+AGG | - | chr6_3:70300886-70300905 | Msa0957960:intron | 20.0% |
| ! | AATCAAAAATACATGTAAGG+GGG | + | chr6_3:70300161-70300180 | None:intergenic | 25.0% |
| ! | AATGACATACATATTAGATG+AGG | + | chr6_3:70300188-70300207 | None:intergenic | 25.0% |
| !!! | ACACATTTTTTTATGTTGCA+GGG | - | chr6_3:70300382-70300401 | Msa0957960:intron | 25.0% |
| ! | TGGATAACATTAGTATTTGT+TGG | - | chr6_3:70300586-70300605 | Msa0957960:CDS | 25.0% |
| !! | ACATTAGTATTTGTTGGAAA+TGG | - | chr6_3:70300592-70300611 | Msa0957960:CDS | 25.0% |
| !! | CATTAGTATTTGTTGGAAAT+GGG | - | chr6_3:70300593-70300612 | Msa0957960:CDS | 25.0% |
| !!! | TGTTTTAATTATGCAGGATT+TGG | - | chr6_3:70300892-70300911 | Msa0957960:intron | 25.0% |
| ! | AATCAAAAATACATGTAAGG+GGG | + | chr6_3:70300161-70300180 | None:intergenic | 25.0% |
| ! | AATGACATACATATTAGATG+AGG | + | chr6_3:70300188-70300207 | None:intergenic | 25.0% |
| !!! | ACACATTTTTTTATGTTGCA+GGG | - | chr6_3:70300382-70300401 | Msa0957960:intron | 25.0% |
| ! | TGGATAACATTAGTATTTGT+TGG | - | chr6_3:70300586-70300605 | Msa0957960:CDS | 25.0% |
| !! | ACATTAGTATTTGTTGGAAA+TGG | - | chr6_3:70300592-70300611 | Msa0957960:CDS | 25.0% |
| !! | CATTAGTATTTGTTGGAAAT+GGG | - | chr6_3:70300593-70300612 | Msa0957960:CDS | 25.0% |
| !!! | TGTTTTAATTATGCAGGATT+TGG | - | chr6_3:70300892-70300911 | Msa0957960:intron | 25.0% |
| !!! | CACACATTTTTTTATGTTGC+AGG | - | chr6_3:70300381-70300400 | Msa0957960:intron | 30.0% |
| TTGATGAATGTGGTTGTATA+TGG | - | chr6_3:70300972-70300991 | Msa0957960:CDS | 30.0% | |
| TGATGAATGTGGTTGTATAT+GGG | - | chr6_3:70300973-70300992 | Msa0957960:CDS | 30.0% | |
| !!! | CACACATTTTTTTATGTTGC+AGG | - | chr6_3:70300381-70300400 | Msa0957960:intron | 30.0% |
| TTGATGAATGTGGTTGTATA+TGG | - | chr6_3:70300972-70300991 | Msa0957960:CDS | 30.0% | |
| TGATGAATGTGGTTGTATAT+GGG | - | chr6_3:70300973-70300992 | Msa0957960:CDS | 30.0% | |
| ! | ATGTCATTGTTGTTCAATCC+AGG | - | chr6_3:70300200-70300219 | Msa0957960:CDS | 35.0% |
| ! | ACCTGCTTAATCAACGTTTT+AGG | - | chr6_3:70300349-70300368 | Msa0957960:intron | 35.0% |
| ! | ACCTAAAACGTTGATTAAGC+AGG | + | chr6_3:70300353-70300372 | None:intergenic | 35.0% |
| AAGTCGTAAGCAAAATTGGT+TGG | + | chr6_3:70300421-70300440 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGCTTACGACTT+TGG | - | chr6_3:70300421-70300440 | Msa0957960:CDS | 35.0% |
| ACCAAAGTCGTAAGCAAAAT+TGG | + | chr6_3:70300425-70300444 | None:intergenic | 35.0% | |
| !! | ACTTTGGTGATAGTGTTGAT+AGG | - | chr6_3:70300437-70300456 | Msa0957960:CDS | 35.0% |
| ! | TGTTGATAGGTATGCTACAT+TGG | - | chr6_3:70300450-70300469 | Msa0957960:CDS | 35.0% |
| CCAATACTTCGAAGGAATTA+TGG | + | chr6_3:70300486-70300505 | None:intergenic | 35.0% | |
| CCATAATTCCTTCGAAGTAT+TGG | - | chr6_3:70300483-70300502 | Msa0957960:CDS | 35.0% | |
| CTTTGGTGAAAAATATTCCC+TGG | + | chr6_3:70300522-70300541 | None:intergenic | 35.0% | |
| ! | CAGGGAATATTTTTCACCAA+AGG | - | chr6_3:70300520-70300539 | Msa0957960:CDS | 35.0% |
| ! | GAATATTTTTCACCAAAGGC+TGG | - | chr6_3:70300524-70300543 | Msa0957960:CDS | 35.0% |
| ! | TAGTATTTGTTGGAAATGGG+AGG | - | chr6_3:70300596-70300615 | Msa0957960:CDS | 35.0% |
| TCAATATCCGTGTCAGAAAT+AGG | - | chr6_3:70300620-70300639 | Msa0957960:CDS | 35.0% | |
| TGAAACTGAGAATCTGAGTT+TGG | - | chr6_3:70300949-70300968 | Msa0957960:CDS | 35.0% | |
| CAATCTTAAAGTGAGCATGA+GGG | + | chr6_3:70301024-70301043 | None:intergenic | 35.0% | |
| TTCTCATTGACACCGATATA+TGG | + | chr6_3:70301115-70301134 | None:intergenic | 35.0% | |
| ! | ATGTCATTGTTGTTCAATCC+AGG | - | chr6_3:70300200-70300219 | Msa0957960:CDS | 35.0% |
| ! | ACCTGCTTAATCAACGTTTT+AGG | - | chr6_3:70300349-70300368 | Msa0957960:intron | 35.0% |
| ! | ACCTAAAACGTTGATTAAGC+AGG | + | chr6_3:70300353-70300372 | None:intergenic | 35.0% |
| AAGTCGTAAGCAAAATTGGT+TGG | + | chr6_3:70300421-70300440 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGCTTACGACTT+TGG | - | chr6_3:70300421-70300440 | Msa0957960:CDS | 35.0% |
| ACCAAAGTCGTAAGCAAAAT+TGG | + | chr6_3:70300425-70300444 | None:intergenic | 35.0% | |
| !! | ACTTTGGTGATAGTGTTGAT+AGG | - | chr6_3:70300437-70300456 | Msa0957960:CDS | 35.0% |
| ! | TGTTGATAGGTATGCTACAT+TGG | - | chr6_3:70300450-70300469 | Msa0957960:CDS | 35.0% |
| CCAATACTTCGAAGGAATTA+TGG | + | chr6_3:70300486-70300505 | None:intergenic | 35.0% | |
| CCATAATTCCTTCGAAGTAT+TGG | - | chr6_3:70300483-70300502 | Msa0957960:CDS | 35.0% | |
| CTTTGGTGAAAAATATTCCC+TGG | + | chr6_3:70300522-70300541 | None:intergenic | 35.0% | |
| ! | CAGGGAATATTTTTCACCAA+AGG | - | chr6_3:70300520-70300539 | Msa0957960:CDS | 35.0% |
| ! | GAATATTTTTCACCAAAGGC+TGG | - | chr6_3:70300524-70300543 | Msa0957960:CDS | 35.0% |
| ! | TAGTATTTGTTGGAAATGGG+AGG | - | chr6_3:70300596-70300615 | Msa0957960:CDS | 35.0% |
| TCAATATCCGTGTCAGAAAT+AGG | - | chr6_3:70300620-70300639 | Msa0957960:CDS | 35.0% | |
| TGAAACTGAGAATCTGAGTT+TGG | - | chr6_3:70300949-70300968 | Msa0957960:CDS | 35.0% | |
| CAATCTTAAAGTGAGCATGA+GGG | + | chr6_3:70301024-70301043 | None:intergenic | 35.0% | |
| TTCTCATTGACACCGATATA+TGG | + | chr6_3:70301115-70301134 | None:intergenic | 35.0% | |
| ACCCTTGATACATAATCCTG+TGG | - | chr6_3:70300223-70300242 | Msa0957960:CDS | 40.0% | |
| CCCACAGGATTATGTATCAA+GGG | + | chr6_3:70300227-70300246 | None:intergenic | 40.0% | |
| CCCTTGATACATAATCCTGT+GGG | - | chr6_3:70300224-70300243 | Msa0957960:CDS | 40.0% | |
| ACCCACAGGATTATGTATCA+AGG | + | chr6_3:70300228-70300247 | None:intergenic | 40.0% | |
| ACATAATCCTGTGGGTGAAA+TGG | - | chr6_3:70300232-70300251 | Msa0957960:CDS | 40.0% | |
| TGATAGGTATGCTACATTGG+TGG | - | chr6_3:70300453-70300472 | Msa0957960:CDS | 40.0% | |
| TCTCTCTACCAATACTTCGA+AGG | + | chr6_3:70300494-70300513 | None:intergenic | 40.0% | |
| ATTGGTAGAGAGAAACAACC+AGG | - | chr6_3:70300501-70300520 | Msa0957960:CDS | 40.0% | |
| TTGGTAGAGAGAAACAACCA+GGG | - | chr6_3:70300502-70300521 | Msa0957960:CDS | 40.0% | |
| GACTTGTATAACGCATCACT+TGG | - | chr6_3:70300559-70300578 | Msa0957960:CDS | 40.0% | |
| TATCCGTGTCAGAAATAGGT+TGG | - | chr6_3:70300624-70300643 | Msa0957960:CDS | 40.0% | |
| ATCCGTGTCAGAAATAGGTT+GGG | - | chr6_3:70300625-70300644 | Msa0957960:CDS | 40.0% | |
| !! | TACCCAACCTATTTCTGACA+CGG | + | chr6_3:70300630-70300649 | None:intergenic | 40.0% |
| ! | TCAGAAATAGGTTGGGTAAG+AGG | - | chr6_3:70300632-70300651 | Msa0957960:CDS | 40.0% |
| TCATTATGCACAAATGGCAC+AGG | + | chr6_3:70300739-70300758 | None:intergenic | 40.0% | |
| ! | GACTTTGTAGAGATCGATTC+TGG | - | chr6_3:70300793-70300812 | Msa0957960:CDS | 40.0% |
| !! | AGAGATCGATTCTGGAATCT+TGG | - | chr6_3:70300801-70300820 | Msa0957960:CDS | 40.0% |
| ! | ATGCAGGATTTGGCTCATAT+TGG | - | chr6_3:70300902-70300921 | Msa0957960:intron | 40.0% |
| ! | TGCAGGATTTGGCTCATATT+GGG | - | chr6_3:70300903-70300922 | Msa0957960:intron | 40.0% |
| !! | CTGAGTTTGGTTGATGAATG+TGG | - | chr6_3:70300962-70300981 | Msa0957960:CDS | 40.0% |
| CCAATCTTAAAGTGAGCATG+AGG | + | chr6_3:70301025-70301044 | None:intergenic | 40.0% | |
| !! | CCTCATGCTCACTTTAAGAT+TGG | - | chr6_3:70301022-70301041 | Msa0957960:intron | 40.0% |
| !! | CATGCTCACTTTAAGATTGG+CGG | - | chr6_3:70301025-70301044 | Msa0957960:intron | 40.0% |
| AAGGCTAGAAGGTTAAAGGA+CGG | - | chr6_3:70301067-70301086 | Msa0957960:intron | 40.0% | |
| ! | GTTATCGGTGCTCCATATAT+CGG | - | chr6_3:70301100-70301119 | Msa0957960:intron | 40.0% |
| ACCCTTGATACATAATCCTG+TGG | - | chr6_3:70300223-70300242 | Msa0957960:CDS | 40.0% | |
| CCCACAGGATTATGTATCAA+GGG | + | chr6_3:70300227-70300246 | None:intergenic | 40.0% | |
| CCCTTGATACATAATCCTGT+GGG | - | chr6_3:70300224-70300243 | Msa0957960:CDS | 40.0% | |
| ACCCACAGGATTATGTATCA+AGG | + | chr6_3:70300228-70300247 | None:intergenic | 40.0% | |
| ACATAATCCTGTGGGTGAAA+TGG | - | chr6_3:70300232-70300251 | Msa0957960:CDS | 40.0% | |
| TGATAGGTATGCTACATTGG+TGG | - | chr6_3:70300453-70300472 | Msa0957960:CDS | 40.0% | |
| TCTCTCTACCAATACTTCGA+AGG | + | chr6_3:70300494-70300513 | None:intergenic | 40.0% | |
| ATTGGTAGAGAGAAACAACC+AGG | - | chr6_3:70300501-70300520 | Msa0957960:CDS | 40.0% | |
| TTGGTAGAGAGAAACAACCA+GGG | - | chr6_3:70300502-70300521 | Msa0957960:CDS | 40.0% | |
| GACTTGTATAACGCATCACT+TGG | - | chr6_3:70300559-70300578 | Msa0957960:CDS | 40.0% | |
| TATCCGTGTCAGAAATAGGT+TGG | - | chr6_3:70300624-70300643 | Msa0957960:CDS | 40.0% | |
| ATCCGTGTCAGAAATAGGTT+GGG | - | chr6_3:70300625-70300644 | Msa0957960:CDS | 40.0% | |
| !! | TACCCAACCTATTTCTGACA+CGG | + | chr6_3:70300630-70300649 | None:intergenic | 40.0% |
| ! | TCAGAAATAGGTTGGGTAAG+AGG | - | chr6_3:70300632-70300651 | Msa0957960:CDS | 40.0% |
| TCATTATGCACAAATGGCAC+AGG | + | chr6_3:70300739-70300758 | None:intergenic | 40.0% | |
| ! | GACTTTGTAGAGATCGATTC+TGG | - | chr6_3:70300793-70300812 | Msa0957960:CDS | 40.0% |
| !! | AGAGATCGATTCTGGAATCT+TGG | - | chr6_3:70300801-70300820 | Msa0957960:CDS | 40.0% |
| ! | ATGCAGGATTTGGCTCATAT+TGG | - | chr6_3:70300902-70300921 | Msa0957960:intron | 40.0% |
| ! | TGCAGGATTTGGCTCATATT+GGG | - | chr6_3:70300903-70300922 | Msa0957960:intron | 40.0% |
| !! | CTGAGTTTGGTTGATGAATG+TGG | - | chr6_3:70300962-70300981 | Msa0957960:CDS | 40.0% |
| CCAATCTTAAAGTGAGCATG+AGG | + | chr6_3:70301025-70301044 | None:intergenic | 40.0% | |
| !! | CCTCATGCTCACTTTAAGAT+TGG | - | chr6_3:70301022-70301041 | Msa0957960:intron | 40.0% |
| !! | CATGCTCACTTTAAGATTGG+CGG | - | chr6_3:70301025-70301044 | Msa0957960:intron | 40.0% |
| AAGGCTAGAAGGTTAAAGGA+CGG | - | chr6_3:70301067-70301086 | Msa0957960:intron | 40.0% | |
| ! | GTTATCGGTGCTCCATATAT+CGG | - | chr6_3:70301100-70301119 | Msa0957960:intron | 40.0% |
| AAGAAGATTGTGTGCGAGCA+TGG | + | chr6_3:70300096-70300115 | None:intergenic | 45.0% | |
| GGATTATGTATCAAGGGTCC+TGG | + | chr6_3:70300221-70300240 | None:intergenic | 45.0% | |
| ATCCTGTGGGTGAAATGGAA+AGG | - | chr6_3:70300237-70300256 | Msa0957960:CDS | 45.0% | |
| AAATGGAAAGGAGAGCCAAC+AGG | - | chr6_3:70300249-70300268 | Msa0957960:CDS | 45.0% | |
| AAACCGCAACTTTAGCCTGT+TGG | + | chr6_3:70300267-70300286 | None:intergenic | 45.0% | |
| ACAGGCTAAAGTTGCGGTTT+AGG | - | chr6_3:70300267-70300286 | Msa0957960:CDS | 45.0% | |
| ! | GTTGCGGTTTAGGACGTTTA+TGG | - | chr6_3:70300277-70300296 | Msa0957960:CDS | 45.0% |
| !! | ATAACGCATCACTTGGTGCA+TGG | - | chr6_3:70300566-70300585 | Msa0957960:CDS | 45.0% |
| TCAACAGCGAATTGCATAGG+AGG | + | chr6_3:70300679-70300698 | None:intergenic | 45.0% | |
| CTCTCAACAGCGAATTGCAT+AGG | + | chr6_3:70300682-70300701 | None:intergenic | 45.0% | |
| CTATGCAATTCGCTGTTGAG+AGG | - | chr6_3:70300680-70300699 | Msa0957960:CDS | 45.0% | |
| TGCACAAATGGCACAGGAAA+AGG | + | chr6_3:70300733-70300752 | None:intergenic | 45.0% | |
| GGTCAAGGCTAGAAGGTTAA+AGG | - | chr6_3:70301063-70301082 | Msa0957960:intron | 45.0% | |
| AAGAAGATTGTGTGCGAGCA+TGG | + | chr6_3:70300096-70300115 | None:intergenic | 45.0% | |
| GGATTATGTATCAAGGGTCC+TGG | + | chr6_3:70300221-70300240 | None:intergenic | 45.0% | |
| ATCCTGTGGGTGAAATGGAA+AGG | - | chr6_3:70300237-70300256 | Msa0957960:CDS | 45.0% | |
| AAATGGAAAGGAGAGCCAAC+AGG | - | chr6_3:70300249-70300268 | Msa0957960:CDS | 45.0% | |
| AAACCGCAACTTTAGCCTGT+TGG | + | chr6_3:70300267-70300286 | None:intergenic | 45.0% | |
| ACAGGCTAAAGTTGCGGTTT+AGG | - | chr6_3:70300267-70300286 | Msa0957960:CDS | 45.0% | |
| ! | GTTGCGGTTTAGGACGTTTA+TGG | - | chr6_3:70300277-70300296 | Msa0957960:CDS | 45.0% |
| !! | ATAACGCATCACTTGGTGCA+TGG | - | chr6_3:70300566-70300585 | Msa0957960:CDS | 45.0% |
| TCAACAGCGAATTGCATAGG+AGG | + | chr6_3:70300679-70300698 | None:intergenic | 45.0% | |
| CTCTCAACAGCGAATTGCAT+AGG | + | chr6_3:70300682-70300701 | None:intergenic | 45.0% | |
| CTATGCAATTCGCTGTTGAG+AGG | - | chr6_3:70300680-70300699 | Msa0957960:CDS | 45.0% | |
| TGCACAAATGGCACAGGAAA+AGG | + | chr6_3:70300733-70300752 | None:intergenic | 45.0% | |
| GGTCAAGGCTAGAAGGTTAA+AGG | - | chr6_3:70301063-70301082 | Msa0957960:intron | 45.0% | |
| CTCGCACACAATCTTCTTGC+TGG | - | chr6_3:70300098-70300117 | Msa0957960:CDS | 50.0% | |
| CTCCTTTCCATTTCACCCAC+AGG | + | chr6_3:70300242-70300261 | None:intergenic | 50.0% | |
| GAGCCAACAGGCTAAAGTTG+CGG | - | chr6_3:70300261-70300280 | Msa0957960:CDS | 50.0% | |
| GTAAGAGGATACGATGTCCC+AGG | - | chr6_3:70300647-70300666 | Msa0957960:CDS | 50.0% | |
| ! | TGCATAGGAGGTGTGAACCT+GGG | + | chr6_3:70300667-70300686 | None:intergenic | 50.0% |
| ! | TTGCATAGGAGGTGTGAACC+TGG | + | chr6_3:70300668-70300687 | None:intergenic | 50.0% |
| AGGGCGTGTAACAAACTGGA+GGG | + | chr6_3:70301005-70301024 | None:intergenic | 50.0% | |
| ! | CATGAGGGCGTGTAACAAAC+TGG | + | chr6_3:70301009-70301028 | None:intergenic | 50.0% |
| !! | GCTCACTTTAAGATTGGCGG+TGG | - | chr6_3:70301028-70301047 | Msa0957960:intron | 50.0% |
| !! | ACTTTAAGATTGGCGGTGGC+TGG | - | chr6_3:70301032-70301051 | Msa0957960:intron | 50.0% |
| ACAGGATGGTCAAGGCTAGA+AGG | - | chr6_3:70301056-70301075 | Msa0957960:intron | 50.0% | |
| ! | GACGGTGACAGTGTCGTTAT+CGG | - | chr6_3:70301085-70301104 | Msa0957960:intron | 50.0% |
| CTCGCACACAATCTTCTTGC+TGG | - | chr6_3:70300098-70300117 | Msa0957960:CDS | 50.0% | |
| CTCCTTTCCATTTCACCCAC+AGG | + | chr6_3:70300242-70300261 | None:intergenic | 50.0% | |
| GAGCCAACAGGCTAAAGTTG+CGG | - | chr6_3:70300261-70300280 | Msa0957960:CDS | 50.0% | |
| GTAAGAGGATACGATGTCCC+AGG | - | chr6_3:70300647-70300666 | Msa0957960:CDS | 50.0% | |
| ! | TGCATAGGAGGTGTGAACCT+GGG | + | chr6_3:70300667-70300686 | None:intergenic | 50.0% |
| ! | TTGCATAGGAGGTGTGAACC+TGG | + | chr6_3:70300668-70300687 | None:intergenic | 50.0% |
| AGGGCGTGTAACAAACTGGA+GGG | + | chr6_3:70301005-70301024 | None:intergenic | 50.0% | |
| ! | CATGAGGGCGTGTAACAAAC+TGG | + | chr6_3:70301009-70301028 | None:intergenic | 50.0% |
| !! | GCTCACTTTAAGATTGGCGG+TGG | - | chr6_3:70301028-70301047 | Msa0957960:intron | 50.0% |
| !! | ACTTTAAGATTGGCGGTGGC+TGG | - | chr6_3:70301032-70301051 | Msa0957960:intron | 50.0% |
| ACAGGATGGTCAAGGCTAGA+AGG | - | chr6_3:70301056-70301075 | Msa0957960:intron | 50.0% | |
| ! | GACGGTGACAGTGTCGTTAT+CGG | - | chr6_3:70301085-70301104 | Msa0957960:intron | 50.0% |
| ACGCAATGCAAGCCAGCCTT+TGG | + | chr6_3:70300539-70300558 | None:intergenic | 55.0% | |
| ! | GAGGGCGTGTAACAAACTGG+AGG | + | chr6_3:70301006-70301025 | None:intergenic | 55.0% |
| TGGCTGGAACAGGATGGTCA+AGG | - | chr6_3:70301048-70301067 | Msa0957960:intron | 55.0% | |
| ACGCAATGCAAGCCAGCCTT+TGG | + | chr6_3:70300539-70300558 | None:intergenic | 55.0% | |
| ! | GAGGGCGTGTAACAAACTGG+AGG | + | chr6_3:70301006-70301025 | None:intergenic | 55.0% |
| TGGCTGGAACAGGATGGTCA+AGG | - | chr6_3:70301048-70301067 | Msa0957960:intron | 55.0% | |
| AGATTGGCGGTGGCTGGAAC+AGG | - | chr6_3:70301038-70301057 | Msa0957960:intron | 60.0% | |
| AGATTGGCGGTGGCTGGAAC+AGG | - | chr6_3:70301038-70301057 | Msa0957960:intron | 60.0% | |
| TGGCGGTGGCTGGAACAGGA+TGG | - | chr6_3:70301042-70301061 | Msa0957960:intron | 65.0% | |
| TGGCGGTGGCTGGAACAGGA+TGG | - | chr6_3:70301042-70301061 | Msa0957960:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 70300071 | 70301162 | 70300071 | ID=Msa0957960;Name=Msa0957960 |
| chr6_3 | mRNA | 70300071 | 70301162 | 70300071 | ID=Msa0957960-mRNA-1;Parent=Msa0957960;Name=Msa0957960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.5|1|1|4|0|266 |
| chr6_3 | exon | 70301114 | 70301162 | 70301114 | ID=Msa0957960-mRNA-1:exon:12881;Parent=Msa0957960-mRNA-1 |
| chr6_3 | exon | 70300935 | 70301011 | 70300935 | ID=Msa0957960-mRNA-1:exon:12880;Parent=Msa0957960-mRNA-1 |
| chr6_3 | exon | 70300411 | 70300830 | 70300411 | ID=Msa0957960-mRNA-1:exon:12879;Parent=Msa0957960-mRNA-1 |
| chr6_3 | exon | 70300071 | 70300325 | 70300071 | ID=Msa0957960-mRNA-1:exon:12878;Parent=Msa0957960-mRNA-1 |
| chr6_3 | CDS | 70301114 | 70301162 | 70301114 | ID=Msa0957960-mRNA-1:cds;Parent=Msa0957960-mRNA-1 |
| chr6_3 | CDS | 70300935 | 70301011 | 70300935 | ID=Msa0957960-mRNA-1:cds;Parent=Msa0957960-mRNA-1 |
| chr6_3 | CDS | 70300411 | 70300830 | 70300411 | ID=Msa0957960-mRNA-1:cds;Parent=Msa0957960-mRNA-1 |
| chr6_3 | CDS | 70300071 | 70300325 | 70300071 | ID=Msa0957960-mRNA-1:cds;Parent=Msa0957960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
