Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231000 | XP_024632151.1 | 66.667 | 198 | 22 | 4 | 1 | 195 | 28 | 184 | 1.28e-77 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231000 | sp|P25011|CCNB1_SOYBN | 28.968 | 252 | 117 | 9 | 9 | 201 | 20 | 268 | 2.52e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231000 | G7INA5 | 56.126 | 253 | 23 | 5 | 1 | 206 | 5 | 216 | 9.22e-77 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa0231000 | 0.821034 | 5.002856e-53 | -8.615850e-47 |
| Msa0062860 | Msa0231000 | 0.803422 | 3.512299e-49 | -8.615850e-47 |
| Msa0095970 | Msa0231000 | 0.825832 | 3.780255e-54 | -8.615850e-47 |
| Msa0102070 | Msa0231000 | 0.817544 | 3.121203e-52 | -8.615850e-47 |
| Msa0107580 | Msa0231000 | 0.804707 | 1.898129e-49 | -8.615850e-47 |
| Msa0123810 | Msa0231000 | 0.834054 | 3.741106e-56 | -8.615850e-47 |
| Msa0142220 | Msa0231000 | 0.827458 | 1.547166e-54 | -8.615850e-47 |
| Msa0153910 | Msa0231000 | 0.829796 | 4.213326e-55 | -8.615850e-47 |
| Msa0158480 | Msa0231000 | 0.800170 | 1.634114e-48 | -8.615850e-47 |
| Msa0188460 | Msa0231000 | 0.870073 | 1.922358e-66 | -8.615850e-47 |
| Msa0197010 | Msa0231000 | 0.800458 | 1.427711e-48 | -8.615850e-47 |
| Msa0227480 | Msa0231000 | 0.803448 | 3.469179e-49 | -8.615850e-47 |
| Msa0231000 | Msa0232850 | 0.806807 | 6.873757e-50 | -8.615850e-47 |
| Msa0231000 | Msa0233300 | 0.823598 | 1.270788e-53 | -8.615850e-47 |
| Msa0231000 | Msa0235140 | 0.817343 | 3.464444e-52 | -8.615850e-47 |
| Msa0231000 | Msa0251320 | 0.803915 | 2.776052e-49 | -8.615850e-47 |
| Msa0231000 | Msa0267000 | 0.835318 | 1.799442e-56 | -8.615850e-47 |
| Msa0231000 | Msa0267010 | 0.838404 | 2.934246e-57 | -8.615850e-47 |
| Msa0231000 | Msa0270520 | 0.915179 | 8.004088e-85 | -8.615850e-47 |
| Msa0231000 | Msa0306460 | 0.808885 | 2.485365e-50 | -8.615850e-47 |
| Msa0231000 | Msa0309020 | 0.881827 | 1.735645e-70 | -8.615850e-47 |
| Msa0231000 | Msa0313760 | 0.838151 | 3.410570e-57 | -8.615850e-47 |
| Msa0231000 | Msa0326200 | 0.802409 | 5.686481e-49 | -8.615850e-47 |
| Msa0231000 | Msa0329190 | 0.807131 | 5.871270e-50 | -8.615850e-47 |
| Msa0231000 | Msa0337900 | 0.817993 | 2.471701e-52 | -8.615850e-47 |
| Msa0231000 | Msa0342240 | 0.821006 | 5.079621e-53 | -8.615850e-47 |
| Msa0231000 | Msa0353190 | 0.810973 | 8.830936e-51 | -8.615850e-47 |
| Msa0231000 | Msa0355220 | 0.811661 | 6.262175e-51 | -8.615850e-47 |
| Msa0231000 | Msa0360510 | 0.854981 | 8.565076e-62 | -8.615850e-47 |
| Msa0231000 | Msa0365500 | 0.800642 | 1.309364e-48 | -8.615850e-47 |
| Msa0231000 | Msa0384800 | 0.850950 | 1.218838e-60 | -8.615850e-47 |
| Msa0231000 | Msa0384890 | 0.828009 | 1.140563e-54 | -8.615850e-47 |
| Msa0231000 | Msa0402290 | 0.821064 | 4.924990e-53 | -8.615850e-47 |
| Msa0231000 | Msa0407750 | 0.812225 | 4.719835e-51 | -8.615850e-47 |
| Msa0231000 | Msa0414410 | 0.836754 | 7.776183e-57 | -8.615850e-47 |
| Msa0231000 | Msa0414420 | 0.828036 | 1.123651e-54 | -8.615850e-47 |
| Msa0231000 | Msa0423020 | 0.824745 | 6.834087e-54 | -8.615850e-47 |
| Msa0231000 | Msa0429880 | 0.808001 | 3.837301e-50 | -8.615850e-47 |
| Msa0231000 | Msa0430420 | 0.801068 | 1.072018e-48 | -8.615850e-47 |
| Msa0231000 | Msa0431690 | 0.816908 | 4.338745e-52 | -8.615850e-47 |
| Msa0231000 | Msa0435230 | 0.811199 | 7.891012e-51 | -8.615850e-47 |
| Msa0231000 | Msa0436780 | 0.842351 | 2.726135e-58 | -8.615850e-47 |
| Msa0231000 | Msa0436800 | 0.813070 | 3.083547e-51 | -8.615850e-47 |
| Msa0231000 | Msa0437990 | 0.800868 | 1.177516e-48 | -8.615850e-47 |
| Msa0231000 | Msa0438620 | 0.806767 | 7.011836e-50 | -8.615850e-47 |
| Msa0231000 | Msa0444130 | 0.809353 | 1.972947e-50 | -8.615850e-47 |
| Msa0231000 | Msa0450000 | 0.817388 | 3.384529e-52 | -8.615850e-47 |
| Msa0231000 | Msa0452620 | 0.825309 | 5.029612e-54 | -8.615850e-47 |
| Msa0231000 | Msa0452900 | 0.832106 | 1.142051e-55 | -8.615850e-47 |
| Msa0231000 | Msa0453120 | 0.849031 | 4.195963e-60 | -8.615850e-47 |
| Msa0231000 | Msa0459170 | 0.841786 | 3.847649e-58 | -8.615850e-47 |
| Msa0231000 | Msa0479340 | 0.805718 | 1.166208e-49 | -8.615850e-47 |
| Msa0231000 | Msa0493000 | 0.802307 | 5.969511e-49 | -8.615850e-47 |
| Msa0231000 | Msa0502270 | 0.810351 | 1.203524e-50 | -8.615850e-47 |
| Msa0231000 | Msa0506270 | 0.830700 | 2.532927e-55 | -8.615850e-47 |
| Msa0231000 | Msa0534540 | 0.801199 | 1.007847e-48 | -8.615850e-47 |
| Msa0231000 | Msa0541130 | 0.800113 | 1.678395e-48 | -8.615850e-47 |
| Msa0231000 | Msa0564890 | 0.829421 | 5.195662e-55 | -8.615850e-47 |
| Msa0231000 | Msa0598780 | 0.811984 | 5.326074e-51 | -8.615850e-47 |
| Msa0231000 | Msa0627410 | 0.800033 | 1.742104e-48 | -8.615850e-47 |
| Msa0231000 | Msa0639610 | 0.808524 | 2.968222e-50 | -8.615850e-47 |
| Msa0231000 | Msa0657970 | 0.808834 | 2.548729e-50 | -8.615850e-47 |
| Msa0231000 | Msa0678930 | 0.801535 | 8.602729e-49 | -8.615850e-47 |
| Msa0231000 | Msa0681270 | 0.803616 | 3.201347e-49 | -8.615850e-47 |
| Msa0231000 | Msa0687070 | 0.809118 | 2.215814e-50 | -8.615850e-47 |
| Msa0231000 | Msa0697060 | 0.825467 | 4.614306e-54 | -8.615850e-47 |
| Msa0231000 | Msa0725850 | 0.820177 | 7.872408e-53 | -8.615850e-47 |
| Msa0231000 | Msa0726140 | 0.839673 | 1.376247e-57 | -8.615850e-47 |
| Msa0231000 | Msa0731560 | 0.808794 | 2.599554e-50 | -8.615850e-47 |
| Msa0231000 | Msa0743720 | 0.807890 | 4.052172e-50 | -8.615850e-47 |
| Msa0231000 | Msa0743810 | 0.838083 | 3.549997e-57 | -8.615850e-47 |
| Msa0231000 | Msa0745060 | 0.826270 | 2.973853e-54 | -8.615850e-47 |
| Msa0231000 | Msa0766630 | 0.827848 | 1.247301e-54 | -8.615850e-47 |
| Msa0231000 | Msa0767720 | 0.833862 | 4.178432e-56 | -8.615850e-47 |
| Msa0231000 | Msa0783160 | 0.844170 | 8.925544e-59 | -8.615850e-47 |
| Msa0231000 | Msa0787600 | 0.819590 | 1.072049e-52 | -8.615850e-47 |
| Msa0231000 | Msa0825860 | 0.824436 | 8.081721e-54 | -8.615850e-47 |
| Msa0231000 | Msa0833290 | 0.827608 | 1.424531e-54 | -8.615850e-47 |
| Msa0231000 | Msa0833300 | 0.814893 | 1.221660e-51 | -8.615850e-47 |
| Msa0231000 | Msa0845930 | 0.803111 | 4.074039e-49 | -8.615850e-47 |
| Msa0231000 | Msa0846210 | 0.816401 | 5.636067e-52 | -8.615850e-47 |
| Msa0231000 | Msa0846350 | 0.814091 | 1.838434e-51 | -8.615850e-47 |
| Msa0231000 | Msa0854980 | 0.829493 | 4.990645e-55 | -8.615850e-47 |
| Msa0231000 | Msa0865320 | 0.804421 | 2.177410e-49 | -8.615850e-47 |
| Msa0231000 | Msa0877250 | 0.800015 | 1.757091e-48 | -8.615850e-47 |
| Msa0231000 | Msa0885280 | 0.863646 | 2.145540e-64 | -8.615850e-47 |
| Msa0231000 | Msa0885290 | 0.868454 | 6.450654e-66 | -8.615850e-47 |
| Msa0231000 | Msa0887020 | 0.812177 | 4.833674e-51 | -8.615850e-47 |
| Msa0231000 | Msa0899450 | 0.808811 | 2.578257e-50 | -8.615850e-47 |
| Msa0231000 | Msa0907260 | 0.845919 | 3.007085e-59 | -8.615850e-47 |
| Msa0231000 | Msa0922720 | 0.808582 | 2.885292e-50 | -8.615850e-47 |
| Msa0231000 | Msa0927290 | 0.804869 | 1.755819e-49 | -8.615850e-47 |
| Msa0231000 | Msa0930390 | 0.806830 | 6.797975e-50 | -8.615850e-47 |
| Msa0231000 | Msa0953120 | 0.807039 | 6.139834e-50 | -8.615850e-47 |
| Msa0231000 | Msa0954020 | 0.822603 | 2.168958e-53 | -8.615850e-47 |
| Msa0231000 | Msa0954910 | 0.830573 | 2.721371e-55 | -8.615850e-47 |
| Msa0231000 | Msa0956270 | 0.837794 | 4.213342e-57 | -8.615850e-47 |
| Msa0231000 | Msa0981370 | 0.818286 | 2.121948e-52 | -8.615850e-47 |
| Msa0231000 | Msa0983090 | 0.801608 | 8.311560e-49 | -8.615850e-47 |
| Msa0231000 | Msa0986400 | 0.800085 | 1.700444e-48 | -8.615850e-47 |
| Msa0231000 | Msa0989060 | 0.827346 | 1.645680e-54 | -8.615850e-47 |
| Msa0231000 | Msa0991830 | 0.833858 | 4.187393e-56 | -8.615850e-47 |
| Msa0231000 | Msa0998690 | 0.806582 | 7.670869e-50 | -8.615850e-47 |
| Msa0231000 | Msa1014540 | 0.823801 | 1.139071e-53 | -8.615850e-47 |
| Msa0231000 | Msa1016280 | 0.824154 | 9.413967e-54 | -8.615850e-47 |
| Msa0231000 | Msa1023010 | 0.800556 | 1.363636e-48 | -8.615850e-47 |
| Msa0231000 | Msa1024240 | 0.813320 | 2.716904e-51 | -8.615850e-47 |
| Msa0231000 | Msa1024450 | 0.801833 | 7.471179e-49 | -8.615850e-47 |
| Msa0231000 | Msa1025360 | 0.831635 | 1.492960e-55 | -8.615850e-47 |
| Msa0231000 | Msa1025370 | 0.830996 | 2.143875e-55 | -8.615850e-47 |
| Msa0231000 | Msa1044830 | 0.826825 | 2.193631e-54 | -8.615850e-47 |
| Msa0231000 | Msa1044840 | 0.834017 | 3.822118e-56 | -8.615850e-47 |
| Msa0231000 | Msa1057920 | 0.806211 | 9.181893e-50 | -8.615850e-47 |
| Msa0231000 | Msa1060840 | 0.806821 | 6.828756e-50 | -8.615850e-47 |
| Msa0231000 | Msa1075220 | -0.802378 | 5.772590e-49 | -8.615850e-47 |
| Msa0231000 | Msa1079180 | 0.800818 | 1.205428e-48 | -8.615850e-47 |
| Msa0231000 | Msa1092990 | 0.832412 | 9.593222e-56 | -8.615850e-47 |
| Msa0231000 | Msa1100980 | 0.841506 | 4.559299e-58 | -8.615850e-47 |
| Msa0231000 | Msa1109440 | 0.831307 | 1.798259e-55 | -8.615850e-47 |
| Msa0231000 | Msa1111150 | 0.803097 | 4.101804e-49 | -8.615850e-47 |
| Msa0231000 | Msa1121200 | 0.814752 | 1.312461e-51 | -8.615850e-47 |
| Msa0231000 | Msa1135740 | 0.818713 | 1.697714e-52 | -8.615850e-47 |
| Msa0231000 | Msa1136090 | 0.861440 | 1.024578e-63 | -8.615850e-47 |
| Msa0231000 | Msa1137690 | 0.805136 | 1.544363e-49 | -8.615850e-47 |
| Msa0231000 | Msa1146110 | 0.808185 | 3.505977e-50 | -8.615850e-47 |
| Msa0231000 | Msa1149360 | 0.823687 | 1.211113e-53 | -8.615850e-47 |
| Msa0231000 | Msa1150370 | 0.813366 | 2.655132e-51 | -8.615850e-47 |
| Msa0231000 | Msa1160670 | 0.836429 | 9.406696e-57 | -8.615850e-47 |
| Msa0231000 | Msa1173920 | 0.823828 | 1.122311e-53 | -8.615850e-47 |
| Msa0231000 | Msa1182090 | 0.808239 | 3.414460e-50 | -8.615850e-47 |
| Msa0231000 | Msa1184420 | 0.837954 | 3.831066e-57 | -8.615850e-47 |
| Msa0231000 | Msa1187940 | 0.832996 | 6.872360e-56 | -8.615850e-47 |
| Msa0231000 | Msa1187950 | 0.843590 | 1.276301e-58 | -8.615850e-47 |
| Msa0231000 | Msa1192640 | 0.841223 | 5.411837e-58 | -8.615850e-47 |
| Msa0231000 | Msa1230430 | 0.844156 | 9.003058e-59 | -8.615850e-47 |
| Msa0231000 | Msa1244250 | 0.801019 | 1.096957e-48 | -8.615850e-47 |
| Msa0231000 | Msa1249490 | 0.807860 | 4.113081e-50 | -8.615850e-47 |
| Msa0231000 | Msa1269670 | 0.829056 | 6.371340e-55 | -8.615850e-47 |
| Msa0231000 | Msa1270230 | 0.845138 | 4.896238e-59 | -8.615850e-47 |
| Msa0231000 | Msa1270240 | 0.849782 | 2.591532e-60 | -8.615850e-47 |
| Msa0231000 | Msa1273230 | 0.822274 | 2.585292e-53 | -8.615850e-47 |
| Msa0231000 | Msa1276040 | 0.800561 | 1.360448e-48 | -8.615850e-47 |
| Msa0231000 | Msa1283330 | 0.838712 | 2.443490e-57 | -8.615850e-47 |
| Msa0231000 | Msa1284680 | 0.831674 | 1.459893e-55 | -8.615850e-47 |
| Msa0231000 | Msa1285930 | 0.860392 | 2.132591e-63 | -8.615850e-47 |
| Msa0231000 | Msa1287800 | 0.822411 | 2.403724e-53 | -8.615850e-47 |
| Msa0231000 | Msa1287810 | 0.836622 | 8.402933e-57 | -8.615850e-47 |
| Msa0231000 | Msa1289430 | 0.813855 | 2.071814e-51 | -8.615850e-47 |
| Msa0231000 | Msa1297210 | 0.806053 | 9.914090e-50 | -8.615850e-47 |
| Msa0231000 | Msa1307890 | 0.823390 | 1.421480e-53 | -8.615850e-47 |
| Msa0231000 | Msa1320300 | 0.800548 | 1.368719e-48 | -8.615850e-47 |
| Msa0231000 | Msa1342200 | 0.801730 | 7.842690e-49 | -8.615850e-47 |
| Msa0231000 | Msa1369430 | 0.815549 | 8.733521e-52 | -8.615850e-47 |
| Msa0231000 | Msa1397610 | 0.808620 | 2.832478e-50 | -8.615850e-47 |
| Msa0231000 | Msa1397860 | 0.804223 | 2.394652e-49 | -8.615850e-47 |
| Msa0231000 | Msa1402790 | 0.824203 | 9.168140e-54 | -8.615850e-47 |
| Msa0231000 | Msa1404000 | 0.838634 | 2.559514e-57 | -8.615850e-47 |
| Msa0231000 | Msa1404020 | 0.817692 | 2.889965e-52 | -8.615850e-47 |
| Msa0231000 | Msa1415310 | 0.808033 | 3.777759e-50 | -8.615850e-47 |
| Msa0231000 | Msa1433120 | 0.819183 | 1.327543e-52 | -8.615850e-47 |
| Msa0231000 | Msa1451620 | -0.808083 | 3.686375e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231000 | MtrunA17_Chr2g0277271 | 56.863 | 102 | 8 | 2 | 105 | 206 | 11 | 76 | 3.76e-26 | 98.6 |
| Msa0231000 | MtrunA17_Chr7g0255771 | 44.086 | 93 | 45 | 2 | 114 | 201 | 183 | 273 | 3.24e-16 | 78.2 |
| Msa0231000 | MtrunA17_Chr7g0255771 | 42.045 | 88 | 50 | 1 | 190 | 277 | 369 | 455 | 5.28e-15 | 74.7 |
| Msa0231000 | MtrunA17_Chr5g0441371 | 39.130 | 92 | 49 | 2 | 115 | 201 | 150 | 239 | 1.94e-15 | 75.9 |
| Msa0231000 | MtrunA17_Chr5g0441371 | 36.364 | 88 | 56 | 0 | 190 | 277 | 330 | 417 | 4.34e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231000 | AT4G37490.1 | 30.769 | 221 | 123 | 6 | 9 | 201 | 21 | 239 | 2.12e-17 | 82.0 |
| Msa0231000 | AT2G26760.1 | 42.857 | 98 | 49 | 2 | 109 | 201 | 109 | 204 | 2.77e-16 | 78.6 |
| Msa0231000 | AT5G06150.2 | 43.011 | 93 | 46 | 2 | 114 | 201 | 166 | 256 | 8.79e-16 | 76.6 |
| Msa0231000 | AT5G06150.1 | 43.011 | 93 | 46 | 2 | 114 | 201 | 166 | 256 | 1.28e-15 | 77.0 |
| Msa0231000 | AT3G11520.1 | 28.378 | 222 | 120 | 7 | 11 | 201 | 20 | 233 | 1.42e-15 | 76.6 |
| Msa0231000 | AT3G11520.2 | 28.378 | 222 | 120 | 7 | 11 | 201 | 20 | 233 | 2.01e-15 | 75.9 |
| Msa0231000 | AT1G34460.7 | 29.720 | 286 | 133 | 12 | 19 | 259 | 145 | 407 | 3.11e-15 | 75.9 |
| Msa0231000 | AT1G34460.9 | 29.720 | 286 | 133 | 12 | 19 | 259 | 131 | 393 | 3.79e-15 | 75.5 |
| Msa0231000 | AT1G34460.5 | 29.720 | 286 | 133 | 12 | 19 | 259 | 145 | 407 | 3.85e-15 | 75.5 |
| Msa0231000 | AT1G34460.6 | 29.720 | 286 | 133 | 12 | 19 | 259 | 145 | 407 | 4.34e-15 | 75.5 |
| Msa0231000 | AT1G34460.3 | 29.720 | 286 | 133 | 12 | 19 | 259 | 145 | 407 | 4.34e-15 | 75.5 |
| Msa0231000 | AT1G34460.8 | 29.720 | 286 | 133 | 12 | 19 | 259 | 145 | 407 | 4.34e-15 | 75.5 |
| Msa0231000 | AT1G34460.1 | 29.720 | 286 | 133 | 12 | 19 | 259 | 145 | 407 | 4.34e-15 | 75.5 |
| Msa0231000 | AT1G34460.2 | 29.520 | 271 | 150 | 11 | 19 | 259 | 145 | 404 | 8.96e-15 | 74.3 |
| Msa0231000 | AT1G34460.4 | 29.520 | 271 | 150 | 11 | 19 | 259 | 145 | 404 | 8.96e-15 | 74.3 |
| Msa0231000 | AT1G76310.3 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 1.44e-12 | 67.8 |
| Msa0231000 | AT1G76310.1 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 1.70e-12 | 67.4 |
| Msa0231000 | AT1G76310.4 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 1.85e-12 | 67.0 |
| Msa0231000 | AT1G76310.2 | 37.615 | 109 | 60 | 3 | 91 | 193 | 138 | 244 | 2.08e-12 | 67.0 |
| Msa0231000 | AT1G20610.1 | 35.000 | 120 | 61 | 5 | 94 | 201 | 138 | 252 | 7.03e-11 | 62.8 |
Find 52 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGATGCTATTAATAATT+TGG | 0.165741 | 2_2:-3205682 | Msa0231000:CDS |
| TTAGCTGGCACTTCTAATTC+TGG | 0.308253 | 2_2:+3206425 | None:intergenic |
| TATGCTTTCATGTTTCTTGC+AGG | 0.333887 | 2_2:-3206785 | None:intergenic |
| CAATATCTGCAGAACCTATC+TGG | 0.343173 | 2_2:-3204503 | Msa0231000:CDS |
| ATGCTCGTTCTATACTCAAT+AGG | 0.349417 | 2_2:-3204541 | Msa0231000:CDS |
| TCTGCAATTCAAGACGATAA+TGG | 0.378719 | 2_2:+3205439 | None:intergenic |
| TACTCAATAGGGTTCCATAT+TGG | 0.384695 | 2_2:-3204529 | Msa0231000:CDS |
| AGAGGTGGCCATCAAGTTCT+TGG | 0.398498 | 2_2:-3206734 | Msa0231000:CDS |
| TGCAGATATTGAGTCCAATA+TGG | 0.414124 | 2_2:+3204515 | None:intergenic |
| CGATATCTCCAAGAACTTGA+TGG | 0.417687 | 2_2:+3206726 | None:intergenic |
| TTTCTTGCAGGGAGAGATAA+GGG | 0.418838 | 2_2:-3206773 | Msa0231000:CDS |
| ATGTCAACAGTCTGATCCTT+GGG | 0.430682 | 2_2:+3206098 | None:intergenic |
| AGATGATGCTATTAATAATA+TGG | 0.435281 | 2_2:-3206069 | Msa0231000:CDS |
| TGCTCGTTCTATACTCAATA+GGG | 0.441679 | 2_2:-3204540 | Msa0231000:CDS |
| CATCAAGTTCTTGGAGATAT+CGG | 0.449503 | 2_2:-3206725 | Msa0231000:CDS |
| GTTCTTTGCAGTAGCCAGAT+AGG | 0.457240 | 2_2:+3204489 | None:intergenic |
| GCACTTCTAATTCTGGTACC+AGG | 0.460854 | 2_2:+3206432 | None:intergenic |
| CATGTCAACAGTCTGATCCT+TGG | 0.464984 | 2_2:+3206097 | None:intergenic |
| GGAGATATCGGTAATCTTGA+GGG | 0.474467 | 2_2:-3206713 | Msa0231000:CDS |
| AGGAAATCAAAATGTGTATG+AGG | 0.481586 | 2_2:-3205491 | Msa0231000:CDS |
| GTTTCTTGCAGGGAGAGATA+AGG | 0.481740 | 2_2:-3206774 | Msa0231000:CDS |
| TCCTCTTCGTTTGCAGACCC+TGG | 0.504181 | 2_2:-3206450 | Msa0231000:CDS |
| CACTTCTAATTCTGGTACCA+GGG | 0.504441 | 2_2:+3206433 | None:intergenic |
| GTGTATGAGGATTATTATTG+TGG | 0.508172 | 2_2:-3205478 | Msa0231000:CDS |
| CTAGCTCAAATGTCAAGATC+CGG | 0.513401 | 2_2:+3205730 | None:intergenic |
| AGAGCAATATGACCTTTCTC+AGG | 0.515131 | 2_2:+3204279 | None:intergenic |
| TGGAGATATCGGTAATCTTG+AGG | 0.517970 | 2_2:-3206714 | Msa0231000:CDS |
| CCAACTCTTGTTCGAGCCCA+AGG | 0.521673 | 2_2:-3206114 | Msa0231000:CDS |
| GATTATTATTGTGGAATGGT+TGG | 0.523494 | 2_2:-3205469 | Msa0231000:CDS |
| ATGCTTTCATGTTTCTTGCA+GGG | 0.525196 | 2_2:-3206784 | None:intergenic |
| CCTTGGGCTCGAACAAGAGT+TGG | 0.532847 | 2_2:+3206114 | None:intergenic |
| CAAGGATCAGACTGTTGACA+TGG | 0.539460 | 2_2:-3206096 | Msa0231000:CDS |
| AAAATTACAGAACCTTGTGA+TGG | 0.541379 | 2_2:+3206673 | None:intergenic |
| ACGCCTTGGTCATAATTAGC+TGG | 0.543546 | 2_2:+3206410 | None:intergenic |
| GAATCAAGTTTCAGACTACA+TGG | 0.549031 | 2_2:-3205523 | Msa0231000:CDS |
| TGAATCAGGTTTGAAATGAA+TGG | 0.554219 | 2_2:-3206473 | Msa0231000:intron |
| CAGATACTGCGCCACACAGT+TGG | 0.564634 | 2_2:-3204364 | Msa0231000:CDS |
| TGAGGATTATTATTGTGGAA+TGG | 0.566827 | 2_2:-3205473 | Msa0231000:CDS |
| GATTCTTTAGTACAACGCCT+TGG | 0.584480 | 2_2:+3206396 | None:intergenic |
| GAGAGATAAGGGAAAGCAGA+AGG | 0.586551 | 2_2:-3206762 | Msa0231000:CDS |
| GGAAAGCAGAAGGCAGAAAG+AGG | 0.589384 | 2_2:-3206752 | Msa0231000:CDS |
| AAGCAGAAGGCAGAAAGAGG+TGG | 0.604430 | 2_2:-3206749 | Msa0231000:CDS |
| AGACTACATGGAATCACAGA+AGG | 0.610858 | 2_2:-3205511 | Msa0231000:CDS |
| AAATTACAGAACCTTGTGAT+GGG | 0.613242 | 2_2:+3206674 | None:intergenic |
| TAGGTATACTAGTCAAGGAG+AGG | 0.620371 | 2_2:+3205370 | None:intergenic |
| GAGATATCGGTAATCTTGAG+GGG | 0.639049 | 2_2:-3206712 | Msa0231000:CDS |
| AGAGAATCATGATGTTGACA+TGG | 0.641817 | 2_2:-3205709 | Msa0231000:CDS |
| AGATTTCACGACCCATCACA+AGG | 0.642914 | 2_2:-3206685 | Msa0231000:intron |
| ACCAGGGTCTGCAAACGAAG+AGG | 0.649187 | 2_2:+3206449 | None:intergenic |
| AAGGATCAGACTGTTGACAT+GGG | 0.656300 | 2_2:-3206095 | Msa0231000:CDS |
| GTGCCAGCTAATTATGACCA+AGG | 0.665369 | 2_2:-3206413 | Msa0231000:CDS |
| TCGTCTTGAATTGCAGACAG+AGG | 0.683191 | 2_2:-3205433 | Msa0231000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAATAATAATAATAA+TGG | + | chr2_2:3205811-3205830 | None:intergenic | 0.0% |
| !! | ACATATAATGAAAAAATAAA+AGG | + | chr2_2:3205414-3205433 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTCATTATATG+TGG | - | chr2_2:3205413-3205432 | Msa0231000:CDS | 10.0% |
| !!! | AAATAATAATAATAATGGAT+AGG | + | chr2_2:3205806-3205825 | None:intergenic | 10.0% |
| !! | ATATTATAAAAACACTAAAA+TGG | - | chr2_2:3205932-3205951 | Msa0231000:intron | 10.0% |
| !! | TTAATATTTATGTATGAATC+AGG | - | chr2_2:3204531-3204550 | Msa0231000:CDS | 15.0% |
| !! | AAAAGATGCTATTAATAATT+TGG | - | chr2_2:3205336-3205355 | Msa0231000:intron | 15.0% |
| !! | TAAAGAAATATCATATCTTA+AGG | - | chr2_2:3205723-3205742 | Msa0231000:CDS | 15.0% |
| !! | AAATTGAACTAAAAATACAT+AGG | + | chr2_2:3205977-3205996 | None:intergenic | 15.0% |
| !! | AAATTTATGAAATAGCAATT+TGG | - | chr2_2:3206079-3206098 | Msa0231000:CDS | 15.0% |
| !!! | AACAAAATAGTGATTTGTTA+GGG | + | chr2_2:3204659-3204678 | None:intergenic | 20.0% |
| !!! | AAACAAAATAGTGATTTGTT+AGG | + | chr2_2:3204660-3204679 | None:intergenic | 20.0% |
| !! | TGTAATGAAATAAAAATCCA+TGG | + | chr2_2:3204875-3204894 | None:intergenic | 20.0% |
| !! | AGATGATGCTATTAATAATA+TGG | - | chr2_2:3204949-3204968 | Msa0231000:intron | 20.0% |
| !! | ATGAAAAAATAAAAGGAGAT+AGG | + | chr2_2:3205407-3205426 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTATATGTGGAT+AGG | - | chr2_2:3205418-3205437 | Msa0231000:CDS | 20.0% |
| !!! | TTTTTCATTATATGTGGATA+GGG | - | chr2_2:3205419-3205438 | Msa0231000:CDS | 20.0% |
| !!! | AATTGATAAATTTTAGATGC+AGG | - | chr2_2:3205468-3205487 | Msa0231000:CDS | 20.0% |
| !!! | TTCTTTATATTTGTTTGCTA+AGG | + | chr2_2:3205710-3205729 | None:intergenic | 20.0% |
| !! | AACACTAAAATGGAATTTAA+CGG | - | chr2_2:3205942-3205961 | Msa0231000:intron | 20.0% |
| !!! | GTATTTTTAGTTCAATTTAC+CGG | - | chr2_2:3205979-3205998 | Msa0231000:intron | 20.0% |
| !!! | GCTATTTCATAAATTTTAAG+AGG | + | chr2_2:3206075-3206094 | None:intergenic | 20.0% |
| !!! | TTCACTAACATTCATTTTAA+GGG | + | chr2_2:3206106-3206125 | None:intergenic | 20.0% |
| !!! | ATTCACTAACATTCATTTTA+AGG | + | chr2_2:3206107-3206126 | None:intergenic | 20.0% |
| !!! | GATTGGTATTCTTTAATTTA+AGG | - | chr2_2:3206252-3206271 | Msa0231000:intron | 20.0% |
| ! | AAACTTTCATGCAAAACTAT+TGG | - | chr2_2:3204446-3204465 | Msa0231000:intron | 25.0% |
| ! | TTAACTAAAACTCTAACAGT+TGG | - | chr2_2:3204703-3204722 | Msa0231000:intron | 25.0% |
| !! | TGTCTAAAACATATAGTGAT+AGG | - | chr2_2:3205043-3205062 | Msa0231000:intron | 25.0% |
| ! | CTATGAGTTTCACAAAATTA+CGG | - | chr2_2:3205100-3205119 | Msa0231000:intron | 25.0% |
| ! | AGAAAATCACCAAGAAAAAT+CGG | + | chr2_2:3205245-3205264 | None:intergenic | 25.0% |
| ! | AATAAAAGGAGATAGGTAAT+AGG | + | chr2_2:3205400-3205419 | None:intergenic | 25.0% |
| !!! | TCCTTATGATTTTTTGAACT+TGG | - | chr2_2:3205834-3205853 | Msa0231000:intron | 25.0% |
| ! | TCCAAGTTCAAAAAATCATA+AGG | + | chr2_2:3205838-3205857 | None:intergenic | 25.0% |
| !!! | ATGATTTTTTGAACTTGGAA+TGG | - | chr2_2:3205839-3205858 | Msa0231000:intron | 25.0% |
| ! | ACTAAAAATACATAGGATGT+AGG | + | chr2_2:3205970-3205989 | None:intergenic | 25.0% |
| !! | AAAAATTGTGGTGCTAAATT+TGG | + | chr2_2:3206142-3206161 | None:intergenic | 25.0% |
| ! | CAAAACCTTCAAAAAAATTG+TGG | + | chr2_2:3206154-3206173 | None:intergenic | 25.0% |
| !! | TTTTGTGTTTATCTTAAGCA+TGG | - | chr2_2:3206169-3206188 | Msa0231000:intron | 25.0% |
| ! | GAGAACCTATTCAAATAAAT+GGG | - | chr2_2:3206191-3206210 | Msa0231000:intron | 25.0% |
| ! | TTGATGTTTACTAAACTGAT+TGG | - | chr2_2:3206235-3206254 | Msa0231000:intron | 25.0% |
| ! | AAATTGTAAAAGTGGAACAA+TGG | + | chr2_2:3206311-3206330 | None:intergenic | 25.0% |
| ! | ACTATTAGCATTTAACGAAA+GGG | + | chr2_2:3206569-3206588 | None:intergenic | 25.0% |
| !!! | AAAATTTTTTGTACACAGCA+TGG | + | chr2_2:3206714-3206733 | None:intergenic | 25.0% |
| !! | AATCTTTCTTTGATGTTTTG+TGG | + | chr2_2:3206775-3206794 | None:intergenic | 25.0% |
| AAATTACAGAACCTTGTGAT+GGG | + | chr2_2:3204347-3204366 | None:intergenic | 30.0% | |
| AAAATTACAGAACCTTGTGA+TGG | + | chr2_2:3204348-3204367 | None:intergenic | 30.0% | |
| ! | TGAATCAGGTTTGAAATGAA+TGG | - | chr2_2:3204545-3204564 | Msa0231000:CDS | 30.0% |
| !! | TTGTAGTTGGCTTGTATAAT+TGG | + | chr2_2:3205003-3205022 | None:intergenic | 30.0% |
| ! | ATTTTGTCAAAGCTACACTT+CGG | + | chr2_2:3205157-3205176 | None:intergenic | 30.0% |
| !! | GTGTAGCTTTGACAAAATTA+CGG | - | chr2_2:3205159-3205178 | Msa0231000:intron | 30.0% |
| AGGAAATCAAAATGTGTATG+AGG | - | chr2_2:3205527-3205546 | Msa0231000:CDS | 30.0% | |
| GTGTATGAGGATTATTATTG+TGG | - | chr2_2:3205540-3205559 | Msa0231000:intron | 30.0% | |
| TGAGGATTATTATTGTGGAA+TGG | - | chr2_2:3205545-3205564 | Msa0231000:intron | 30.0% | |
| GATTATTATTGTGGAATGGT+TGG | - | chr2_2:3205549-3205568 | Msa0231000:intron | 30.0% | |
| !! | TCTTTTAGGTATACTAGTCA+AGG | + | chr2_2:3205656-3205675 | None:intergenic | 30.0% |
| ! | ACTAACATCAGATCTCTTTT+AGG | + | chr2_2:3205670-3205689 | None:intergenic | 30.0% |
| TAAAAGAGATCTGATGTTAG+TGG | - | chr2_2:3205669-3205688 | Msa0231000:CDS | 30.0% | |
| CTTTCTCCATTGAAATAAAC+TGG | + | chr2_2:3205912-3205931 | None:intergenic | 30.0% | |
| !!! | TAGCACCACAATTTTTTTGA+AGG | - | chr2_2:3206146-3206165 | Msa0231000:intron | 30.0% |
| GGAGAACCTATTCAAATAAA+TGG | - | chr2_2:3206190-3206209 | Msa0231000:intron | 30.0% | |
| GTCTACCCATTTATTTGAAT+AGG | + | chr2_2:3206199-3206218 | None:intergenic | 30.0% | |
| GGTTCTCAAAATTGTAAAAG+TGG | + | chr2_2:3206319-3206338 | None:intergenic | 30.0% | |
| ! | CAAAGGAGTTGCATATATTT+TGG | + | chr2_2:3206340-3206359 | None:intergenic | 30.0% |
| CAAAATATATGCAACTCCTT+TGG | - | chr2_2:3206338-3206357 | Msa0231000:intron | 30.0% | |
| TCTTGTAAATTATCATGTCG+TGG | - | chr2_2:3206407-3206426 | Msa0231000:CDS | 30.0% | |
| CTATTAGCATTTAACGAAAG+GGG | + | chr2_2:3206568-3206587 | None:intergenic | 30.0% | |
| GACTATTAGCATTTAACGAA+AGG | + | chr2_2:3206570-3206589 | None:intergenic | 30.0% | |
| !!! | AAATTTTCAAGTCCTGAGAA+AGG | - | chr2_2:3206727-3206746 | Msa0231000:CDS | 30.0% |
| CATCAAGTTCTTGGAGATAT+CGG | - | chr2_2:3204293-3204312 | Msa0231000:CDS | 35.0% | |
| ! | TCTTGTAGTACTTTTCTTGC+AGG | - | chr2_2:3204385-3204404 | Msa0231000:intron | 35.0% |
| ! | CTTGTAGTACTTTTCTTGCA+GGG | - | chr2_2:3204386-3204405 | Msa0231000:intron | 35.0% |
| TTGCAAGCAACAAATAAGCT+TGG | + | chr2_2:3204426-3204445 | None:intergenic | 35.0% | |
| TGAGTTTCACAAAATTACGG+TGG | - | chr2_2:3205103-3205122 | Msa0231000:intron | 35.0% | |
| CACATTGTGATTCTACCTAA+CGG | - | chr2_2:3205185-3205204 | Msa0231000:intron | 35.0% | |
| AGAGAATCATGATGTTGACA+TGG | - | chr2_2:3205309-3205328 | Msa0231000:intron | 35.0% | |
| GAATCAAGTTTCAGACTACA+TGG | - | chr2_2:3205495-3205514 | Msa0231000:CDS | 35.0% | |
| TCTGCAATTCAAGACGATAA+TGG | + | chr2_2:3205582-3205601 | None:intergenic | 35.0% | |
| !!! | TTTTTTGAACTTGGAATGGC+AGG | - | chr2_2:3205843-3205862 | Msa0231000:intron | 35.0% |
| CAGACACCAGTTTATTTCAA+TGG | - | chr2_2:3205903-3205922 | Msa0231000:intron | 35.0% | |
| TCCTTTGGTATTTGCATAGA+TGG | - | chr2_2:3206353-3206372 | Msa0231000:intron | 35.0% | |
| TCCATCTATGCAAATACCAA+AGG | + | chr2_2:3206357-3206376 | None:intergenic | 35.0% | |
| ATTTGCATAGATGGAGAACA+TGG | - | chr2_2:3206362-3206381 | Msa0231000:intron | 35.0% | |
| ATGCTCGTTCTATACTCAAT+AGG | - | chr2_2:3206477-3206496 | Msa0231000:intron | 35.0% | |
| TGCTCGTTCTATACTCAATA+GGG | - | chr2_2:3206478-3206497 | Msa0231000:intron | 35.0% | |
| TACTCAATAGGGTTCCATAT+TGG | - | chr2_2:3206489-3206508 | Msa0231000:intron | 35.0% | |
| TGCAGATATTGAGTCCAATA+TGG | + | chr2_2:3206506-3206525 | None:intergenic | 35.0% | |
| TTTCTTGCAGGGAGAGATAA+GGG | - | chr2_2:3204245-3204264 | Msa0231000:CDS | 40.0% | |
| CGATATCTCCAAGAACTTGA+TGG | + | chr2_2:3204295-3204314 | None:intergenic | 40.0% | |
| TGGAGATATCGGTAATCTTG+AGG | - | chr2_2:3204304-3204323 | Msa0231000:CDS | 40.0% | |
| GGAGATATCGGTAATCTTGA+GGG | - | chr2_2:3204305-3204324 | Msa0231000:CDS | 40.0% | |
| GAGATATCGGTAATCTTGAG+GGG | - | chr2_2:3204306-3204325 | Msa0231000:CDS | 40.0% | |
| CACTTCTAATTCTGGTACCA+GGG | + | chr2_2:3204588-3204607 | None:intergenic | 40.0% | |
| TTAGCTGGCACTTCTAATTC+TGG | + | chr2_2:3204596-3204615 | None:intergenic | 40.0% | |
| GATTCTTTAGTACAACGCCT+TGG | + | chr2_2:3204625-3204644 | None:intergenic | 40.0% | |
| AACCAAGGTTAGAAGAACCA+TGG | - | chr2_2:3204855-3204874 | Msa0231000:intron | 40.0% | |
| ATCCATGGTTCTTCTAACCT+TGG | + | chr2_2:3204860-3204879 | None:intergenic | 40.0% | |
| ATGTCAACAGTCTGATCCTT+GGG | + | chr2_2:3204923-3204942 | None:intergenic | 40.0% | |
| AAGGATCAGACTGTTGACAT+GGG | - | chr2_2:3204923-3204942 | Msa0231000:intron | 40.0% | |
| ! | ACCACATTGCGTTTTGTAGT+TGG | + | chr2_2:3205016-3205035 | None:intergenic | 40.0% |
| GTAGGTTTAGACTAACCGTT+AGG | + | chr2_2:3205203-3205222 | None:intergenic | 40.0% | |
| TCACCAAGAAAAATCGGTCT+GGG | + | chr2_2:3205239-3205258 | None:intergenic | 40.0% | |
| ATCACCAAGAAAAATCGGTC+TGG | + | chr2_2:3205240-3205259 | None:intergenic | 40.0% | |
| CTAGCTCAAATGTCAAGATC+CGG | + | chr2_2:3205291-3205310 | None:intergenic | 40.0% | |
| AGACTACATGGAATCACAGA+AGG | - | chr2_2:3205507-3205526 | Msa0231000:CDS | 40.0% | |
| TAGGTATACTAGTCAAGGAG+AGG | + | chr2_2:3205651-3205670 | None:intergenic | 40.0% | |
| GCAGCAAGCAATACTATATC+TGG | - | chr2_2:3205761-3205780 | Msa0231000:intron | 40.0% | |
| GTCATGCACAATAGATGATC+CGG | + | chr2_2:3206001-3206020 | None:intergenic | 40.0% | |
| CTATTGTGCATGACAAAGAG+AGG | - | chr2_2:3206007-3206026 | Msa0231000:intron | 40.0% | |
| CACTGCATCAATCATTGAAG+GGG | + | chr2_2:3206442-3206461 | None:intergenic | 40.0% | |
| GCACTGCATCAATCATTGAA+GGG | + | chr2_2:3206443-3206462 | None:intergenic | 40.0% | |
| TGCACTGCATCAATCATTGA+AGG | + | chr2_2:3206444-3206463 | None:intergenic | 40.0% | |
| CAATATCTGCAGAACCTATC+TGG | - | chr2_2:3206515-3206534 | Msa0231000:intron | 40.0% | |
| TTAACGAAAGGGGACATACT+TGG | + | chr2_2:3206558-3206577 | None:intergenic | 40.0% | |
| ! | GTGTATTTTCACCAACTGTG+TGG | + | chr2_2:3206668-3206687 | None:intergenic | 40.0% |
| AGAGCAATATGACCTTTCTC+AGG | + | chr2_2:3206742-3206761 | None:intergenic | 40.0% | |
| ! | TCTTTGATGTTTTGTGGCAG+TGG | + | chr2_2:3206769-3206788 | None:intergenic | 40.0% |
| GTTTCTTGCAGGGAGAGATA+AGG | - | chr2_2:3204244-3204263 | Msa0231000:CDS | 45.0% | |
| GAGAGATAAGGGAAAGCAGA+AGG | - | chr2_2:3204256-3204275 | Msa0231000:CDS | 45.0% | |
| AGATTTCACGACCCATCACA+AGG | - | chr2_2:3204333-3204352 | Msa0231000:CDS | 45.0% | |
| GCACTTCTAATTCTGGTACC+AGG | + | chr2_2:3204589-3204608 | None:intergenic | 45.0% | |
| GTGCCAGCTAATTATGACCA+AGG | - | chr2_2:3204605-3204624 | Msa0231000:intron | 45.0% | |
| ACGCCTTGGTCATAATTAGC+TGG | + | chr2_2:3204611-3204630 | None:intergenic | 45.0% | |
| ATCGTCTCAACTCTCAACCA+AGG | - | chr2_2:3204840-3204859 | Msa0231000:intron | 45.0% | |
| CATGTCAACAGTCTGATCCT+TGG | + | chr2_2:3204924-3204943 | None:intergenic | 45.0% | |
| CAAGGATCAGACTGTTGACA+TGG | - | chr2_2:3204922-3204941 | Msa0231000:intron | 45.0% | |
| GCCAACTACAAAACGCAATG+TGG | - | chr2_2:3205012-3205031 | Msa0231000:intron | 45.0% | |
| TTGTCAAAGCTACACTTCGG+AGG | + | chr2_2:3205154-3205173 | None:intergenic | 45.0% | |
| ACCAAGAAAAATCGGTCTGG+GGG | + | chr2_2:3205237-3205256 | None:intergenic | 45.0% | |
| CACCAAGAAAAATCGGTCTG+GGG | + | chr2_2:3205238-3205257 | None:intergenic | 45.0% | |
| TGTGATGCGTTTCTGTTAGC+CGG | - | chr2_2:3205269-3205288 | Msa0231000:intron | 45.0% | |
| TCGTCTTGAATTGCAGACAG+AGG | - | chr2_2:3205585-3205604 | Msa0231000:intron | 45.0% | |
| GCATTCCATCTAGCAGAACT+TGG | - | chr2_2:3206384-3206403 | Msa0231000:intron | 45.0% | |
| CAAGACCAAGTTCTGCTAGA+TGG | + | chr2_2:3206392-3206411 | None:intergenic | 45.0% | |
| GTTCTTTGCAGTAGCCAGAT+AGG | + | chr2_2:3206532-3206551 | None:intergenic | 45.0% | |
| GGAAAGCAGAAGGCAGAAAG+AGG | - | chr2_2:3204266-3204285 | Msa0231000:CDS | 50.0% | |
| AAGCAGAAGGCAGAAAGAGG+TGG | - | chr2_2:3204269-3204288 | Msa0231000:CDS | 50.0% | |
| AGAGGTGGCCATCAAGTTCT+TGG | - | chr2_2:3204284-3204303 | Msa0231000:CDS | 50.0% | |
| AAAATCGGTCTGGGGGATAG+AGG | + | chr2_2:3205230-3205249 | None:intergenic | 50.0% | |
| !! | TCCCCCAGACCGATTTTTCT+TGG | - | chr2_2:3205233-3205252 | Msa0231000:intron | 50.0% |
| AGAACACTCACTGCTGCAGC+TGG | + | chr2_2:3204480-3204499 | None:intergenic | 55.0% | |
| TCCTCTTCGTTTGCAGACCC+TGG | - | chr2_2:3204568-3204587 | Msa0231000:intron | 55.0% | |
| ACCAGGGTCTGCAAACGAAG+AGG | + | chr2_2:3204572-3204591 | None:intergenic | 55.0% | |
| CCTTGGGCTCGAACAAGAGT+TGG | + | chr2_2:3204907-3204926 | None:intergenic | 55.0% | |
| CCAACTCTTGTTCGAGCCCA+AGG | - | chr2_2:3204904-3204923 | Msa0231000:intron | 55.0% | |
| ! | CTGGGGGATAGAGGAAGTGT+AGG | + | chr2_2:3205221-3205240 | None:intergenic | 55.0% |
| CAGATACTGCGCCACACAGT+TGG | - | chr2_2:3206654-3206673 | Msa0231000:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 3204242 | 3206798 | 3204242 | ID=Msa0231000;Name=Msa0231000 |
| chr2_2 | mRNA | 3204242 | 3206798 | 3204242 | ID=Msa0231000-mRNA-1;Parent=Msa0231000;Name=Msa0231000-mRNA-1;_AED=0.36;_eAED=0.37;_QI=0|0|0|0.71|1|1|7|0|281 |
| chr2_2 | exon | 3206686 | 3206798 | 3206686 | ID=Msa0231000-mRNA-1:exon:1244;Parent=Msa0231000-mRNA-1 |
| chr2_2 | exon | 3206394 | 3206487 | 3206394 | ID=Msa0231000-mRNA-1:exon:1243;Parent=Msa0231000-mRNA-1 |
| chr2_2 | exon | 3206047 | 3206144 | 3206047 | ID=Msa0231000-mRNA-1:exon:1242;Parent=Msa0231000-mRNA-1 |
| chr2_2 | exon | 3205647 | 3205752 | 3205647 | ID=Msa0231000-mRNA-1:exon:1241;Parent=Msa0231000-mRNA-1 |
| chr2_2 | exon | 3205357 | 3205550 | 3205357 | ID=Msa0231000-mRNA-1:exon:1240;Parent=Msa0231000-mRNA-1 |
| chr2_2 | exon | 3204482 | 3204580 | 3204482 | ID=Msa0231000-mRNA-1:exon:1239;Parent=Msa0231000-mRNA-1 |
| chr2_2 | exon | 3204242 | 3204383 | 3204242 | ID=Msa0231000-mRNA-1:exon:1238;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3206686 | 3206798 | 3206686 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3206394 | 3206487 | 3206394 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3206047 | 3206144 | 3206047 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3205647 | 3205752 | 3205647 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3205357 | 3205550 | 3205357 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3204482 | 3204580 | 3204482 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| chr2_2 | CDS | 3204242 | 3204383 | 3204242 | ID=Msa0231000-mRNA-1:cds;Parent=Msa0231000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
